NO27G00800, NO27G00800 (gene) Nannochloropsis oceanica

Overview
NameNO27G00800
Unique NameNO27G00800
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2017
Alignment locationchr27:280046..282062 -

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Properties
Property NameValue
DescriptionRibosome biogenesis brx1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:280046..282062 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR026532BRX1
IPR007109Brix
Homology
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_005853808.1 (ribosome biogenesis brx1-like protein [Nannochloropsis gaditana CCMP526] >EKU22556.1 ribosome biogenesis brx1-like protein [Nannochloropsis gaditana CCMP526] >EWM21016.1 ribosome biogenesis protein brx1 [Nannochloropsis gaditana])

HSP 1 Score: 481.5 bits (1238), Expect = 3.200e-132
Identity = 255/304 (83.88%), Postives = 272/304 (89.47%), Query Frame = 0
Query:  193 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELFRVKV 497
            VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQV+NEIAEVKSCNNCL+LEARKRQDLYLWLSKTPLGPSIKF+VLNVHTLDELRLTGNAMLGSRP+LSFD AFDA+PHTR+++ALL D FGTPRGHPKSKPFVDRVL+FALADGKVWVRNYQIVD AP  T+AD         XXXXXXXXXXXXXXX            LTSLVEIGPRFVLNPIR+F+GSFGGPTLYQNP F SPNFVR+E+KR EGARL+ KMKAD +RKERKA+AVLPKDELQELFRVKV
Sbjct:  175 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAAD----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELFRVKV 474          
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_005854930.1 (ribosome biogenesis brx1-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU21432.1 ribosome biogenesis brx1-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 357.5 bits (916), Expect = 6.900e-95
Identity = 168/184 (91.30%), Postives = 178/184 (96.74%), Query Frame = 0
Query:  193 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSAD 377
            VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQV+NEIAEVKSCNNCL+LEARKRQDLYLWLSKTPLGPSIKF+VLNVHTLDELRLTGNAMLGSRP+LSFD AFDA+PHTR+++ALL D FGTPRGHPKSKPFVDRVL+FALADGKVWVRNYQIVD AP  T+AD
Sbjct:   99 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAAD 282          
BLAST of NO27G00800 vs. NCBI_GenBank
Match: OQS05841.1 (hypothetical protein THRCLA_02071 [Thraustotheca clavata])

HSP 1 Score: 330.9 bits (847), Expect = 6.900e-87
Identity = 162/294 (55.10%), Postives = 201/294 (68.37%), Query Frame = 0
Query:  199 YKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493
            Y N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L VVNEIAE+K CNN +FLEARKRQDLY+W+SKTP+GPS KF V NVHT+DEL++TGNA++GSRPLL+FD AFD   H +LIK +    +GTP+GHPKSKPF+DRV+SF  AD K+W RNYQ+ D A +    +  A  + E                           ELT+LVEIGPRFVL+PIRIF GSFGG TLYQNP +++PN VR   +  +  R   +  A   R  R    V+P+D+  ++F
Sbjct:   35 YINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNNTIFLEARKRQDLYMWISKTPIGPSAKFLVQNVHTMDELKMTGNALIGSRPLLTFDSAFDEHAHLKLIKNMFIQVWGTPKGHPKSKPFIDRVMSFYYADNKIWCRNYQLADEA-DSKKLEQAAVHRGE---------------------------ELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAQLDKRDRYVTRKLAQDSRASRNEVNVMPEDQFADVF 300          
BLAST of NO27G00800 vs. NCBI_GenBank
Match: OQR87062.1 (hypothetical protein ACHHYP_09608 [Achlya hypogyna])

HSP 1 Score: 329.3 bits (843), Expect = 2.000e-86
Identity = 167/299 (55.85%), Postives = 203/299 (67.89%), Query Frame = 0
Query:  194 KYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493
            K   SY N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L VVNEIAE+K CN+ +FLEARKRQDLY+W++ TP GPSIKF V NVHT+DEL++TGNA++GSRPLL+FD AFD   H +LIK +    +GTP+GHPKSKPF+DRV+SF  AD K+W RNYQ+ D A          T K E                    V  G  +ELT+LVEIGPRFVL+PIRIF GSFGG TLYQNP +++PN VR      +  R   +  A   R  R    V+P+DEL ++F
Sbjct:   31 KPKSSYVNKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNSTIFLEARKRQDLYMWVAGTPTGPSIKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDEVAHLKLIKNMFIQVWGTPKGHPKSKPFIDRVMSFYFADNKIWCRNYQLADEAD---------TKKLEQ-----------------AAVHRG--EELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAHLDKRDRYVTRKLAQDSRASRAETNVMPEDELADVF 301          
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_009842371.1 (hypothetical protein H257_15832 [Aphanomyces astaci] >ETV68072.1 hypothetical protein H257_15832 [Aphanomyces astaci])

HSP 1 Score: 327.0 bits (837), Expect = 1.000e-85
Identity = 160/294 (54.42%), Postives = 200/294 (68.03%), Query Frame = 0
Query:  199 YKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493
            Y N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L VVNEIAE+K CNN +FLEARK+QDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRPLL+FD AFD   H +LIKAL    +GTP+GHPKSKPF+DRV+SF  ADGK+W RN+Q+ D A          T K E                          +ELT+L+EIGPRFV+ PIRIF GSFGG TLYQNP++++PN  R   K  +  +   +  A+  R  R    V P+D+  ++F
Sbjct:   36 YVNKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNNTVFLEARKKQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDETAHMQLIKALFIQVWGTPKGHPKSKPFIDRVMSFYFADGKIWCRNFQLADEAD---------TKKLEQAALH-------------------RGEELTNLIEIGPRFVMTPIRIFDGSFGGVTLYQNPNYVAPNETRKTAKYDKRDKYVTRKLAEDTRASRNQVNVHPEDQFADVF 301          
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_008873061.1 (hypothetical protein H310_08914 [Aphanomyces invadans] >ETV98186.1 hypothetical protein H310_08914 [Aphanomyces invadans])

HSP 1 Score: 327.0 bits (837), Expect = 1.000e-85
Identity = 161/300 (53.67%), Postives = 202/300 (67.33%), Query Frame = 0
Query:  193 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493
            +K  G Y N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L VVNEIAE+K CNN +FLEARK+QDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRPLL+FD AFD   H +LIKA+    +GTP+GHPKSKPF+DRV+SF  ADGK+W RN+Q+ D A          T K E                          +ELT+L+EIGPRFV+ PIRIF GSFGG TLYQNP +++PN  R   K  +  +   +  A+  R  R    V P+D+  ++F
Sbjct:   31 LKPAGGYINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNNTVFLEARKKQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDETAHMQLIKAMFIQVWGTPKGHPKSKPFIDRVMSFYFADGKIWCRNFQLADEAD---------TKKLEQAALH-------------------RGEELTNLIEIGPRFVMTPIRIFDGSFGGVTLYQNPHYVAPNETRKHAKFDKRDKYVARKLAEDSRASRNQINVHPEDQFADVF 302          
BLAST of NO27G00800 vs. NCBI_GenBank
Match: OEU14988.1 (Brix-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 325.9 bits (834), Expect = 2.200e-85
Identity = 164/302 (54.30%), Postives = 201/302 (66.56%), Query Frame = 0
Query:  196 DGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDC--KGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKT--PLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELFR 494
            DG Y+N+QR LV C RG TARYRHLLEDLR ++PHHKK+ KLD    G    VN+IA+++ CN  LFLE RKRQD YLWL +    LGPS KF++ N HT+DELRLTGN M GSRP+L+FD AFD   H RL+K + TD FGTPRGHPKSKPFVDRV++F  AD K+WVRNYQI++           AT+  EA                    +   ++E TSLVEIGPRFVLNPIRIF GSFGG TL+QNP F+SPN +R+E K+ +G     +  +   RK R  + VLP+D L  +FR
Sbjct:   54 DGKYRNKQRCLVLCLRGATARYRHLLEDLRTMLPHHKKESKLDAGKNGAASAVNDIAQMRGCNTVLFLECRKRQDAYLWLGRVGDNLGPSAKFHLTNCHTMDELRLTGNCMRGSRPILTFDAAFDTTSHLRLLKTIFTDVFGTPRGHPKSKPFVDRVMAFYYADNKIWVRNYQILEQQ---------ATNALEAHTLK----------------KKSGQEESTSLVEIGPRFVLNPIRIFRGSFGGQTLFQNPDFVSPNEIRAEEKKRQGLSYTDRKDSQKRRKTRHEELVLPEDPLDSVFR 330          
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_012204918.1 (hypothetical protein SPRG_10396 [Saprolegnia parasitica CBS 223.65] >KDO24321.1 hypothetical protein SPRG_10396 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 325.5 bits (833), Expect = 2.900e-85
Identity = 164/299 (54.85%), Postives = 201/299 (67.22%), Query Frame = 0
Query:  194 KYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493
            K   SY N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L VVNEIAE+K CN  +FLEARKRQDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRPLL+FD AFD   H +L+K +    +GTP+GHPKSKPF+DRV+SF  AD K+W RNYQ+ D A          T K E                    V  G  +ELT+LVEIGPRFVL+PIRIF GSFGG TLYQNP +++PN VR      +  R   +  A   R  R    V+P+D+  ++F
Sbjct:   31 KPKSSYINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNTTIFLEARKRQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDEVAHLKLLKNMFIQVWGTPKGHPKSKPFIDRVMSFYYADNKIWCRNYQLADEAD---------TKKLEQ-----------------AAVHRG--EELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAHLDKRDRYVTRKLAQDSRASRNELNVMPEDQFADVF 301          
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_008606579.1 (hypothetical protein SDRG_02758 [Saprolegnia diclina VS20] >EQC40105.1 hypothetical protein SDRG_02758 [Saprolegnia diclina VS20])

HSP 1 Score: 325.1 bits (832), Expect = 3.800e-85
Identity = 164/299 (54.85%), Postives = 201/299 (67.22%), Query Frame = 0
Query:  194 KYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493
            K   SY N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K  L VVNEIAE+K CN  +FLEARKRQDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRPLL+FD AFD   H +L+K +    +GTP+GHPKSKPF+DRV+SF  AD K+W RNYQ+ D A          T K E                    V  G  +ELT+LVEIGPRFVL+PIRIF GSFGG TLYQNP +++PN VR      +  R   +  A   R  R    V+P+D+  ++F
Sbjct:   31 KPKSSYINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNTTIFLEARKRQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALIGSRPLLTFDAAFDDVAHLKLLKNMFIQVWGTPKGHPKSKPFIDRVMSFYYADNKIWCRNYQLADEAD---------TKKLEQ-----------------AAVHRG--EELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAHLDKRDRYVTRKLAQDSRASRNELNVMPEDQFADVF 301          
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_002181728.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46942.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 321.2 bits (822), Expect = 5.500e-84
Identity = 158/306 (51.63%), Postives = 209/306 (68.30%), Query Frame = 0
Query:  193 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDC--KGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKT---PLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELFR 494
            V+ DG Y+N+QR L  CSRGVTARYRHLLEDLR L+PHHKK+ KLD    G  Q V++I E++SCN  +FLE RKRQD Y+WL +      GPS++F+V N+HT+DELRLTGN M GSRP+++FD +F    H +L+K L  DTFGTPRGHPKSKPFVDRV++F  AD ++WVRNYQ+++  P         ++  EA                    +    +E TS+VEIGPRFVLNPIRIF GSFGG TL+QNP F+SPN +RS  ++++G++   +  +   R ERK++ VLP+D L+ +FR
Sbjct:   68 VRNDGRYRNKQRCLTLCSRGVTARYRHLLEDLRTLMPHHKKESKLDPGEDGVGQAVSDICEMRSCNTTMFLECRKRQDAYMWLGRVGGQSPGPSVRFHVTNIHTMDELRLTGNCMKGSRPIMTFDESFGRVDHLKLLKELFIDTFGTPRGHPKSKPFVDRVMAFCYADNRIWVRNYQVIEEQP---------SNAKEAHQIK----------------KNSGREEATSMVEIGPRFVLNPIRIFRGSFGGQTLFQNPDFVSPNEIRSLERKSKGSQYDQRKNSQKERHERKSQLVLPEDPLKSVFR 348          
The following BLAST results are available for this feature:
BLAST of NO27G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853808.13.200e-13283.88ribosome biogenesis brx1-like protein [Nannochloro... [more]
XP_005854930.16.900e-9591.30ribosome biogenesis brx1-like protein, partial [Na... [more]
OQS05841.16.900e-8755.10hypothetical protein THRCLA_02071 [Thraustotheca c... [more]
OQR87062.12.000e-8655.85hypothetical protein ACHHYP_09608 [Achlya hypogyna... [more]
XP_009842371.11.000e-8554.42hypothetical protein H257_15832 [Aphanomyces astac... [more]
XP_008873061.11.000e-8553.67hypothetical protein H310_08914 [Aphanomyces invad... [more]
OEU14988.12.200e-8554.30Brix-domain-containing protein [Fragilariopsis cyl... [more]
XP_012204918.12.900e-8554.85hypothetical protein SPRG_10396 [Saprolegnia paras... [more]
XP_008606579.13.800e-8554.85hypothetical protein SDRG_02758 [Saprolegnia dicli... [more]
XP_002181728.15.500e-8451.63predicted protein [Phaeodactylum tricornutum CCAP ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL057nonsL057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005086NSK005086Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G00800.1NO27G00800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|603539gene_8669Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100081g4gene9409Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G00800.1NO27G00800.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G00800 ID=NO27G00800|Name=NO27G00800|organism=Nannochloropsis oceanica|type=gene|length=2017bp
CAGGCACATTTCTGTTTTTTTCCTGGGTCCAGTCGGCCAGCTATCTTCAC
TCAAAATGGTTCGAGAGAAGACAGTACGTCTCAAGAAGACAGCCCATGCT
CCCCGCAGCAGTACTGCTGTCGCTCCCGCTCCCACCAGCAGTGCCAAGCC
AGTGGCCGAGAAGCAGCAGAAACAAAAGGACGCAAAGATCATGATCAACA
GCAAGCGTCAGAAGCAGGAGAAGGCGGAGCCACGCAAGCGACAAAAAAAG
GAGGAGGCTCACGACGAGGAGGATTACGAGGAGGAGGACGAGGAGGAGGA
AGAGAGCATACCCAGGAAGTCATCGCACATGGGCGGCATGCGTGGCCTCA
TGATGCGCGGTGGTGCCGAGGGGAGCAGCAGCAGCGACAGCGGCGGTAGT
GGTGACGATGAGGACGAGATGGACCAGGGCAGCGATGCTCCACAAAAGGG
GAGCAAGAAGCGCCTGCTCTCTACTGCTGCCGCCGATGCCGCGTCCAAGA
AGCAAGCCATCGCTACGGTTAAGTCTGCGACAAGCAAGGGAGGTCCCAAA
AGCGCGGAAAGGACCAGCATCATCGCCACCACCGCCAGCAGCAACAGCAA
CAGCAACAGCACCGCAGCAGCAGCGTCAACAGTGAAATACGACGGCTCTT
ACAAAAACAGGCAACGCGTCCTAGTCTTCTGCTCTCGAGGCGTCACCGCT
CGATATCGCCACCTCCTAGAGGACCTGCGCAAGCTTATCCCTCACCACAA
GAAAGATGTCAAATTGGACTGCAAAGGTGACCTGCAGGTGGTGAACGAAA
TAGCGGAGGTGAAGAGCTGCAACAACTGCCTCTTCCTTGAAGCCCGCAAG
CGGCAGGATCTTTACCTGTGGCTCTCCAAGACCCCCCTCGGCCCGTCCAT
CAAATTCAACGTTCTGAACGTCCACACACTGGACGAGCTTCGCCTGACGG
GAAACGCCATGCTGGGCTCCCGTCCCCTCCTCTCCTTCGACCTTGCCTTC
GATGCCCAGCCCCACACCCGGCTCATCAAAGCCCTCCTCACCGACACCTT
TGGGACGCCCCGTGGTCATCCCAAGAGCAAGCCTTTTGTGGACCGTGTTC
TGTCTTTCGCCTTGGCAGATGGGAAAGTCTGGGTCCGAAATTACCAGATC
GTCGACACTGCCCCTGAAGGGACAAGCGCAGACCCGCTCGCAACCGACAA
GGCGGAAGCCAAAGCAGCAGCGAGGGCAGCGGCGGCGGCCAAGAAGAAGA
AAGAGGGATGGCTAGGGGTCGAAGGAGGGAATGAGGATGAATTGACGTCA
CTGGTTGAAATTGGCCCTCGGTTTGTCCTAAATCCGATAAGGATTTTTTC
GGGGAGTTTTGGCGGACCTACGTTGTACCAGAATCCCTCGTTTATCTCAC
CCAATTTTGTGAGGAGTGAGAGGAAGAGGACGGAGGGGGCACGACTGGCG
CATAAGATGAAGGCAGATAGCGTGAGGAAGGAGAGGAAGGCGAAGGCAGT
TTTGCCAAAGGATGAGTTGCAGGAATTGTTCAGGGTCAAGGTCTAAGGGG
AAGGAGGGAGGTAGGGGTAGAGACGAGAGAAAGATGATGAGCTGAGAAAG
GACAAAGAAATAAAAGTATTTAAAAGAATGAAGGGAAGTGATACTAAGCG
AGAAGGGAGAAGGAAAAGCACAGCAAAGAAGAAGAGTGAGGGGAGGCACT
GCCGAGTGGCACAAGAGGGAGAACAAAAGAGTCAATCAGAGAATGGAGAA
GAAAGAGATTGGGGGAAAAAAGGAAACGAAATTGGAAGACGGCAGAGACG
AAGAGTCATTCAATTCGAATGCTACACAGTGATTTGACCTTTATGGAGGT
AAAATAAAAAATCATGCGCATTGATAAGGCAACGGAGAAAGCAATCAGAA
AGTAAGGAAACAGGAACAGAAGACATCAGAAGCATGGGTGAACCAGACAT
GTTTGAGACATCTGCTTAGGTGCATTTATTGATTTACTTGTATTTAATTT
TTTATTTTTAATCATTA
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protein sequence of NO27G00800.1

>NO27G00800.1-protein ID=NO27G00800.1-protein|Name=NO27G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=497bp
MVREKTVRLKKTAHAPRSSTAVAPAPTSSAKPVAEKQQKQKDAKIMINSK
RQKQEKAEPRKRQKKEEAHDEEDYEEEDEEEEESIPRKSSHMGGMRGLMM
RGGAEGSSSSDSGGSGDDEDEMDQGSDAPQKGSKKRLLSTAAADAASKKQ
AIATVKSATSKGGPKSAERTSIIATTASSNSNSNSTAAAASTVKYDGSYK
NRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIA
EVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGN
AMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLS
FALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAKAAARAAAAAKKKKE
GWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPN
FVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELFRVKV*
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Synonyms
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