NO27G00800, NO27G00800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_005853808.1 (ribosome biogenesis brx1-like protein [Nannochloropsis gaditana CCMP526] >EKU22556.1 ribosome biogenesis brx1-like protein [Nannochloropsis gaditana CCMP526] >EWM21016.1 ribosome biogenesis protein brx1 [Nannochloropsis gaditana]) HSP 1 Score: 481.5 bits (1238), Expect = 3.200e-132 Identity = 255/304 (83.88%), Postives = 272/304 (89.47%), Query Frame = 0 Query: 193 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELFRVKV 497 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQV+NEIAEVKSCNNCL+LEARKRQDLYLWLSKTPLGPSIKF+VLNVHTLDELRLTGNAMLGSRP+LSFD AFDA+PHTR+++ALL D FGTPRGHPKSKPFVDRVL+FALADGKVWVRNYQIVD AP T+AD XXXXXXXXXXXXXXX LTSLVEIGPRFVLNPIR+F+GSFGGPTLYQNP F SPNFVR+E+KR EGARL+ KMKAD +RKERKA+AVLPKDELQELFRVKV Sbjct: 175 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAAD----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSLVEIGPRFVLNPIRVFAGSFGGPTLYQNPDFTSPNFVRAEKKRAEGARLSAKMKADGLRKERKAQAVLPKDELQELFRVKV 474
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_005854930.1 (ribosome biogenesis brx1-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU21432.1 ribosome biogenesis brx1-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 357.5 bits (916), Expect = 6.900e-95 Identity = 168/184 (91.30%), Postives = 178/184 (96.74%), Query Frame = 0 Query: 193 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSAD 377 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQV+NEIAEVKSCNNCL+LEARKRQDLYLWLSKTPLGPSIKF+VLNVHTLDELRLTGNAMLGSRP+LSFD AFDA+PHTR+++ALL D FGTPRGHPKSKPFVDRVL+FALADGKVWVRNYQIVD AP T+AD Sbjct: 99 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVINEIAEVKSCNNCLYLEARKRQDLYLWLSKTPLGPSIKFSVLNVHTLDELRLTGNAMLGSRPVLSFDEAFDARPHTRVMRALLVDAFGTPRGHPKSKPFVDRVLAFALADGKVWVRNYQIVDAAPAATAAD 282
BLAST of NO27G00800 vs. NCBI_GenBank
Match: OQS05841.1 (hypothetical protein THRCLA_02071 [Thraustotheca clavata]) HSP 1 Score: 330.9 bits (847), Expect = 6.900e-87 Identity = 162/294 (55.10%), Postives = 201/294 (68.37%), Query Frame = 0 Query: 199 YKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493 Y N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K L VVNEIAE+K CNN +FLEARKRQDLY+W+SKTP+GPS KF V NVHT+DEL++TGNA++GSRPLL+FD AFD H +LIK + +GTP+GHPKSKPF+DRV+SF AD K+W RNYQ+ D A + + A + E ELT+LVEIGPRFVL+PIRIF GSFGG TLYQNP +++PN VR + + R + A R R V+P+D+ ++F Sbjct: 35 YINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNNTIFLEARKRQDLYMWISKTPIGPSAKFLVQNVHTMDELKMTGNALIGSRPLLTFDSAFDEHAHLKLIKNMFIQVWGTPKGHPKSKPFIDRVMSFYYADNKIWCRNYQLADEA-DSKKLEQAAVHRGE---------------------------ELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAQLDKRDRYVTRKLAQDSRASRNEVNVMPEDQFADVF 300
BLAST of NO27G00800 vs. NCBI_GenBank
Match: OQR87062.1 (hypothetical protein ACHHYP_09608 [Achlya hypogyna]) HSP 1 Score: 329.3 bits (843), Expect = 2.000e-86 Identity = 167/299 (55.85%), Postives = 203/299 (67.89%), Query Frame = 0 Query: 194 KYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493 K SY N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K L VVNEIAE+K CN+ +FLEARKRQDLY+W++ TP GPSIKF V NVHT+DEL++TGNA++GSRPLL+FD AFD H +LIK + +GTP+GHPKSKPF+DRV+SF AD K+W RNYQ+ D A T K E V G +ELT+LVEIGPRFVL+PIRIF GSFGG TLYQNP +++PN VR + R + A R R V+P+DEL ++F Sbjct: 31 KPKSSYVNKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNSTIFLEARKRQDLYMWVAGTPTGPSIKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDEVAHLKLIKNMFIQVWGTPKGHPKSKPFIDRVMSFYFADNKIWCRNYQLADEAD---------TKKLEQ-----------------AAVHRG--EELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAHLDKRDRYVTRKLAQDSRASRAETNVMPEDELADVF 301
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_009842371.1 (hypothetical protein H257_15832 [Aphanomyces astaci] >ETV68072.1 hypothetical protein H257_15832 [Aphanomyces astaci]) HSP 1 Score: 327.0 bits (837), Expect = 1.000e-85 Identity = 160/294 (54.42%), Postives = 200/294 (68.03%), Query Frame = 0 Query: 199 YKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493 Y N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K L VVNEIAE+K CNN +FLEARK+QDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRPLL+FD AFD H +LIKAL +GTP+GHPKSKPF+DRV+SF ADGK+W RN+Q+ D A T K E +ELT+L+EIGPRFV+ PIRIF GSFGG TLYQNP++++PN R K + + + A+ R R V P+D+ ++F Sbjct: 36 YVNKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNNTVFLEARKKQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDETAHMQLIKALFIQVWGTPKGHPKSKPFIDRVMSFYFADGKIWCRNFQLADEAD---------TKKLEQAALH-------------------RGEELTNLIEIGPRFVMTPIRIFDGSFGGVTLYQNPNYVAPNETRKTAKYDKRDKYVTRKLAEDTRASRNQVNVHPEDQFADVF 301
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_008873061.1 (hypothetical protein H310_08914 [Aphanomyces invadans] >ETV98186.1 hypothetical protein H310_08914 [Aphanomyces invadans]) HSP 1 Score: 327.0 bits (837), Expect = 1.000e-85 Identity = 161/300 (53.67%), Postives = 202/300 (67.33%), Query Frame = 0 Query: 193 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493 +K G Y N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K L VVNEIAE+K CNN +FLEARK+QDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRPLL+FD AFD H +LIKA+ +GTP+GHPKSKPF+DRV+SF ADGK+W RN+Q+ D A T K E +ELT+L+EIGPRFV+ PIRIF GSFGG TLYQNP +++PN R K + + + A+ R R V P+D+ ++F Sbjct: 31 LKPAGGYINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNNTVFLEARKKQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDETAHMQLIKAMFIQVWGTPKGHPKSKPFIDRVMSFYFADGKIWCRNFQLADEAD---------TKKLEQAALH-------------------RGEELTNLIEIGPRFVMTPIRIFDGSFGGVTLYQNPHYVAPNETRKHAKFDKRDKYVARKLAEDSRASRNQINVHPEDQFADVF 302
BLAST of NO27G00800 vs. NCBI_GenBank
Match: OEU14988.1 (Brix-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 325.9 bits (834), Expect = 2.200e-85 Identity = 164/302 (54.30%), Postives = 201/302 (66.56%), Query Frame = 0 Query: 196 DGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDC--KGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKT--PLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELFR 494 DG Y+N+QR LV C RG TARYRHLLEDLR ++PHHKK+ KLD G VN+IA+++ CN LFLE RKRQD YLWL + LGPS KF++ N HT+DELRLTGN M GSRP+L+FD AFD H RL+K + TD FGTPRGHPKSKPFVDRV++F AD K+WVRNYQI++ AT+ EA + ++E TSLVEIGPRFVLNPIRIF GSFGG TL+QNP F+SPN +R+E K+ +G + + RK R + VLP+D L +FR Sbjct: 54 DGKYRNKQRCLVLCLRGATARYRHLLEDLRTMLPHHKKESKLDAGKNGAASAVNDIAQMRGCNTVLFLECRKRQDAYLWLGRVGDNLGPSAKFHLTNCHTMDELRLTGNCMRGSRPILTFDAAFDTTSHLRLLKTIFTDVFGTPRGHPKSKPFVDRVMAFYYADNKIWVRNYQILEQQ---------ATNALEAHTLK----------------KKSGQEESTSLVEIGPRFVLNPIRIFRGSFGGQTLFQNPDFVSPNEIRAEEKKRQGLSYTDRKDSQKRRKTRHEELVLPEDPLDSVFR 330
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_012204918.1 (hypothetical protein SPRG_10396 [Saprolegnia parasitica CBS 223.65] >KDO24321.1 hypothetical protein SPRG_10396 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 325.5 bits (833), Expect = 2.900e-85 Identity = 164/299 (54.85%), Postives = 201/299 (67.22%), Query Frame = 0 Query: 194 KYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493 K SY N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K L VVNEIAE+K CN +FLEARKRQDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRPLL+FD AFD H +L+K + +GTP+GHPKSKPF+DRV+SF AD K+W RNYQ+ D A T K E V G +ELT+LVEIGPRFVL+PIRIF GSFGG TLYQNP +++PN VR + R + A R R V+P+D+ ++F Sbjct: 31 KPKSSYINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNTTIFLEARKRQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALMGSRPLLTFDAAFDEVAHLKLLKNMFIQVWGTPKGHPKSKPFIDRVMSFYYADNKIWCRNYQLADEAD---------TKKLEQ-----------------AAVHRG--EELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAHLDKRDRYVTRKLAQDSRASRNELNVMPEDQFADVF 301
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_008606579.1 (hypothetical protein SDRG_02758 [Saprolegnia diclina VS20] >EQC40105.1 hypothetical protein SDRG_02758 [Saprolegnia diclina VS20]) HSP 1 Score: 325.1 bits (832), Expect = 3.800e-85 Identity = 164/299 (54.85%), Postives = 201/299 (67.22%), Query Frame = 0 Query: 194 KYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDCKGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKTPLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELF 493 K SY N+QRVLVF SRG+T RYRH L+DLRKL+PHHKKDVKLD K L VVNEIAE+K CN +FLEARKRQDLY+W+S+TP GPS KF V NVHT+DEL++TGNA++GSRPLL+FD AFD H +L+K + +GTP+GHPKSKPF+DRV+SF AD K+W RNYQ+ D A T K E V G +ELT+LVEIGPRFVL+PIRIF GSFGG TLYQNP +++PN VR + R + A R R V+P+D+ ++F Sbjct: 31 KPKSSYINKQRVLVFASRGITTRYRHFLDDLRKLLPHHKKDVKLDAKDTLHVVNEIAEIKGCNTTIFLEARKRQDLYMWVSRTPTGPSAKFLVQNVHTMDELKMTGNALIGSRPLLTFDAAFDDVAHLKLLKNMFIQVWGTPKGHPKSKPFIDRVMSFYYADNKIWCRNYQLADEAD---------TKKLEQ-----------------AAVHRG--EELTNLVEIGPRFVLSPIRIFDGSFGGVTLYQNPHYVAPNEVRKNAHLDKRDRYVTRKLAQDSRASRNELNVMPEDQFADVF 301
BLAST of NO27G00800 vs. NCBI_GenBank
Match: XP_002181728.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46942.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 321.2 bits (822), Expect = 5.500e-84 Identity = 158/306 (51.63%), Postives = 209/306 (68.30%), Query Frame = 0 Query: 193 VKYDGSYKNRQRVLVFCSRGVTARYRHLLEDLRKLIPHHKKDVKLDC--KGDLQVVNEIAEVKSCNNCLFLEARKRQDLYLWLSKT---PLGPSIKFNVLNVHTLDELRLTGNAMLGSRPLLSFDLAFDAQPHTRLIKALLTDTFGTPRGHPKSKPFVDRVLSFALADGKVWVRNYQIVDTAPEGTSADPLATDKAEAXXXXXXXXXXXXXXXGWLGVEGGNEDELTSLVEIGPRFVLNPIRIFSGSFGGPTLYQNPSFISPNFVRSERKRTEGARLAHKMKADSVRKERKAKAVLPKDELQELFR 494 V+ DG Y+N+QR L CSRGVTARYRHLLEDLR L+PHHKK+ KLD G Q V++I E++SCN +FLE RKRQD Y+WL + GPS++F+V N+HT+DELRLTGN M GSRP+++FD +F H +L+K L DTFGTPRGHPKSKPFVDRV++F AD ++WVRNYQ+++ P ++ EA + +E TS+VEIGPRFVLNPIRIF GSFGG TL+QNP F+SPN +RS ++++G++ + + R ERK++ VLP+D L+ +FR Sbjct: 68 VRNDGRYRNKQRCLTLCSRGVTARYRHLLEDLRTLMPHHKKESKLDPGEDGVGQAVSDICEMRSCNTTMFLECRKRQDAYMWLGRVGGQSPGPSVRFHVTNIHTMDELRLTGNCMKGSRPIMTFDESFGRVDHLKLLKELFIDTFGTPRGHPKSKPFVDRVMAFCYADNRIWVRNYQVIEEQP---------SNAKEAHQIK----------------KNSGREEATSMVEIGPRFVLNPIRIFRGSFGGQTLFQNPDFVSPNEIRSLERKSKGSQYDQRKNSQKERHERKSQLVLPEDPLKSVFR 348 The following BLAST results are available for this feature:
BLAST of NO27G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00800 ID=NO27G00800|Name=NO27G00800|organism=Nannochloropsis oceanica|type=gene|length=2017bpback to top protein sequence of NO27G00800.1 >NO27G00800.1-protein ID=NO27G00800.1-protein|Name=NO27G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=497bpback to top Synonyms
Publications
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