NO27G00780, NO27G00780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00780 vs. NCBI_GenBank
Match: XP_005853805.1 (hypothetical protein NGA_0370602 [Nannochloropsis gaditana CCMP526] >XP_005854929.1 hypothetical protein NGA_0370601 [Nannochloropsis gaditana CCMP526] >EKU21431.1 hypothetical protein NGA_0370601 [Nannochloropsis gaditana CCMP526] >EKU22553.1 hypothetical protein NGA_0370602 [Nannochloropsis gaditana CCMP526] >EWM21011.1 GCK domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 168.3 bits (425), Expect = 4.000e-38 Identity = 75/90 (83.33%), Postives = 80/90 (88.89%), Query Frame = 0 Query: 158 PAAGIRAVLDAMEGEEDEGKYDDVELEETECPLCHFMRASPCGPTWVRWEKCIHAHKSKDEDFVNPCARITLKLAECIQKHQDDFPPTLR 248 PA I AVL ME EEDEG+YD VELEETECPLCHFMRASPCG TWVRWEKCIH HKSK+EDFV PCAR+TLKLAECIQ+HQ+DFPPTLR Sbjct: 112 PAGDIAAVLSEME-EEDEGRYDSVELEETECPLCHFMRASPCGATWVRWEKCIHFHKSKEEDFVGPCARVTLKLAECIQQHQNDFPPTLR 200
BLAST of NO27G00780 vs. NCBI_GenBank
Match: XP_022997117.1 (uncharacterized protein LOC111492108 [Cucurbita maxima]) HSP 1 Score: 73.2 bits (178), Expect = 1.800e-9 Identity = 36/100 (36.00%), Postives = 50/100 (50.00%), Query Frame = 0 Query: 148 HEERKEAIGPPAAGIRAVLDAMEGEEDEGKYDDVELEETECPLCHFMRASPCGPTWVRWEKCIHAHKSKDEDFVNPCARITLKLAECIQKHQDDFPPTLR 248 H E K P +++ + G EDEG D E EE EC C FM+ C ++V WEKCI + ED V C +T L +C++ H D + P L+ Sbjct: 34 HSEEKS----PQESVQSGKISESGGEDEGGEDLDEEEEGECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPILK 129
BLAST of NO27G00780 vs. NCBI_GenBank
Match: XP_006846199.1 (uncharacterized protein LOC18436111 [Amborella trichopoda] >ERN07874.1 hypothetical protein AMTR_s00012p00219010 [Amborella trichopoda]) HSP 1 Score: 71.6 bits (174), Expect = 5.100e-9 Identity = 34/86 (39.53%), Postives = 48/86 (55.81%), Query Frame = 0 Query: 167 DAME---GEEDEGKYD--DVELEETECPLCHFMRASPCGPTWVRWEKCIHAHKSKDEDFVNPCARITLKLAECIQKHQDDFPPTLR 248 DAM+ E D+G D VE+EE EC C FM+ CG ++ WEKC+ ++K ED V C +T L +C+ +H + P LR Sbjct: 17 DAMDNGASELDQGSGDGAGVEVEEEECGFCLFMKGGGCGEEFIAWEKCVEEGETKKEDIVEKCFEVTSYLKKCMDEHSAYYEPILR 102
BLAST of NO27G00780 vs. NCBI_GenBank
Match: XP_016205753.1 (uncharacterized protein LOC107646076 isoform X1 [Arachis ipaensis]) HSP 1 Score: 71.2 bits (173), Expect = 6.700e-9 Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 0 Query: 172 EEDEGKYDDVELEETECPLCHFMRASPCGPTWVRWEKCIHAHKSKDEDFVNPCARITLKLAECIQKHQDDFPPTLR 248 EE EGK ++ E EE EC C FM++ C +++ WEKC + ED V C IT L +C++ H D + P LR Sbjct: 53 EEKEGKVEEAE-EEGECGFCLFMKSGGCRESFIEWEKCTEEAEKNKEDIVEKCLNITAALKQCMEAHFDYYEPILR 127
BLAST of NO27G00780 vs. NCBI_GenBank
Match: XP_020959561.1 (uncharacterized protein LOC107646076 isoform X2 [Arachis ipaensis]) HSP 1 Score: 71.2 bits (173), Expect = 6.700e-9 Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 0 Query: 172 EEDEGKYDDVELEETECPLCHFMRASPCGPTWVRWEKCIHAHKSKDEDFVNPCARITLKLAECIQKHQDDFPPTLR 248 EE EGK ++ E EE EC C FM++ C +++ WEKC + ED V C IT L +C++ H D + P LR Sbjct: 53 EEKEGKVEEAE-EEGECGFCLFMKSGGCRESFIEWEKCTEEAEKNKEDIVEKCLNITAALKQCMEAHFDYYEPILR 127
BLAST of NO27G00780 vs. NCBI_GenBank
Match: XP_023536143.1 (uncharacterized protein LOC111797387 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 71.2 bits (173), Expect = 6.700e-9 Identity = 32/77 (41.56%), Postives = 42/77 (54.55%), Query Frame = 0 Query: 171 GEEDEGKYDDVELEETECPLCHFMRASPCGPTWVRWEKCIHAHKSKDEDFVNPCARITLKLAECIQKHQDDFPPTLR 248 G EDEG D E EE EC C FM+ C ++V WEKCI + ED V C +T L +C++ H D + P L+ Sbjct: 52 GGEDEGGEDLDEEEEGECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPILK 128
BLAST of NO27G00780 vs. NCBI_GenBank
Match: CCA23646.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 69.7 bits (169), Expect = 2.000e-8 Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 0 Query: 185 ETECPLCHFMRASPCGPTWVRWEKCIHAHKSKDEDFVNPCARITLKLAECIQKHQD 241 + EC C FMRA PCG + WEKC+ K K EDF+ C + TL + +CI++H + Sbjct: 243 KAECGFCKFMRAGPCGTEFTAWEKCLDECKMKGEDFIEKCGKETLDMRDCIERHPE 298
BLAST of NO27G00780 vs. NCBI_GenBank
Match: XP_004517013.1 (PREDICTED: myb-like protein X [Cicer arietinum]) HSP 1 Score: 68.9 bits (167), Expect = 3.300e-8 Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 0 Query: 172 EEDEGKYDDVELEETECPLCHFMRASPCGPTWVRWEKCIHAHKSKDEDFVNPCARITLKLAECIQKHQDDFPPTLR 248 EEDE EE EC C FM+ C T+V WE C+ + K+ED V C+++T +L +C+ H D + P LR Sbjct: 51 EEDE--------EEGECGFCLFMKGGGCKDTFVDWENCVKEAEDKNEDLVEKCSQVTARLKQCMDAHSDYYEPILR 118
BLAST of NO27G00780 vs. NCBI_GenBank
Match: XP_013456758.1 (neurofilament medium polypeptide [Medicago truncatula] >KEH30789.1 GCK domain protein [Medicago truncatula]) HSP 1 Score: 67.0 bits (162), Expect = 1.300e-7 Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0 Query: 188 CPLCHFMRASPCGPTWVRWEKCIHAHKSKDEDFVNPCARITLKLAECIQKHQDDFPPTLR 248 C C FM+ C T++ WE C+ + K+ED V CA +T KL +C+ +H D + P LR Sbjct: 47 CGFCLFMKGGGCKDTFINWEDCVKEAEDKNEDLVEKCAEVTAKLKQCMDEHSDYYEPILR 106
BLAST of NO27G00780 vs. NCBI_GenBank
Match: KEH30790.1 (GCK domain protein [Medicago truncatula]) HSP 1 Score: 67.0 bits (162), Expect = 1.300e-7 Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0 Query: 188 CPLCHFMRASPCGPTWVRWEKCIHAHKSKDEDFVNPCARITLKLAECIQKHQDDFPPTLR 248 C C FM+ C T++ WE C+ + K+ED V CA +T KL +C+ +H D + P LR Sbjct: 47 CGFCLFMKGGGCKDTFINWEDCVKEAEDKNEDLVEKCAEVTAKLKQCMDEHSDYYEPILR 106 The following BLAST results are available for this feature:
BLAST of NO27G00780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 16
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00780 ID=NO27G00780|Name=NO27G00780|organism=Nannochloropsis oceanica|type=gene|length=1685bpback to top protein sequence of NO27G00780.1 >NO27G00780.1-protein ID=NO27G00780.1-protein|Name=NO27G00780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=337bpback to top Synonyms
Publications
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