NO27G00550, NO27G00550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00550 vs. NCBI_GenBank
Match: EWM21038.1 (p-tefb-associated cyclin-dependent protein kinase lsk1 [Nannochloropsis gaditana]) HSP 1 Score: 198.7 bits (504), Expect = 1.000e-46 Identity = 115/208 (55.29%), Postives = 149/208 (71.63%), Query Frame = 0 Query: 746 NLIFLDEEGRIRLGCFEEAVALPAXXXXXXXXXXXXXXXEKELKGK--QLEGVKRAMEEMWDEGKRRKKNLVAPEVVLGGDASPMSDCWSMGCLLSLLLLSRPLFDARSNGQLMEHVYRVVGSYDGVWKQGTSLPYYHLCKPQRASGYAPRVEKYVRGLVEKASKEGREGWREDGAGVVVGLVRLDPTKRATARECLEKAPFLAVYRE 952 N I++DEEGR+RLG FEEA A XXXXXXXXXXXXX L+ +R +EE+W+EGKRR+KNL APEV+LGG+A+ SD WS+GC+LS LLL R F+AR+ QLMEH+YR VGSYD VWK G LPYY LCKPQRASGYAPR K+VR L+ A + + ++ A ++ L+ L+P +R +ARECLE AP+ ++++ Sbjct: 2 NQIYVDEEGRLRLGGFEEATLYHAGGXXXXXXXXXXXXXXXXXXXXXVDLDVGRRNLEEVWEEGKRRRKNLTAPEVLLGGEANFASDVWSVGCVLSALLLGRLAFEARTGRQLMEHIYRGVGSYDNVWKLGQFLPYYPLCKPQRASGYAPRTHKHVRELLAVARGKKKLPISDEAAALLPALLHLNPMERPSARECLEVAPYFQIFKK 209
BLAST of NO27G00550 vs. NCBI_GenBank
Match: CBN74517.1 (Possible Cdc2-related protein kinase [Ectocarpus siliculosus]) HSP 1 Score: 104.4 bits (259), Expect = 2.700e-18 Identity = 88/319 (27.59%), Postives = 143/319 (44.83%), Query Frame = 0 Query: 668 DAEGGRNGRKEDEIASSPYLFLAFSPPLFTLASLLKHTTLSSRGPALSPALLRALTHSLLSAVEWCHSRGVVIKNVDPNLIFLDEEGRIRLGCFEEAVALPAXXXXXXXXXXXXXXXE----------------------------KELKGKQLEGVKRAMEEMWDEGKRRKKNL--VAPEVVLG--GDASPMSDCWSMGCLLSLLLLSRPLFDARSNGQLMEHVYRVVGS-YDGVWKQGTSLPYYHLCKPQRASG----YAPRVEKYVRGLVEKASKEGREGWREDG--AGVVVGLVRLDPTKRATARECLEKAPFLA 948 D E + DE+ YL L P +TLA +L+ L R L L+R++ LL AV CH R VVIK++D ++L G ++LGC +A+ + E K+ K ++ K+A+ + +G+ K L +APEV++ P +D W++GCL + L L +P+F R+ Q +E+V++ GS G W +G P Y +P G + PR++K + + EG +G D A ++ GL++LD R +AR+ L +P+ A Sbjct: 1362 DGEKASPSKIPDELLKPSYLLL--EPVRYTLAEILR---LCRRPMVLPGPLVRSMLQDLLGAVALCHDRNVVIKSLDAEKVYLSVSGCLKLGCLAQAMMVAPKDAATAPNDGMNGIDEDVEGEVDMEVEETPAGRKAAHREGKLRMKQEKLQRENACKKAVAAVTKDGEPAKTVLWGMAPEVIVDQKHPHGPATDIWAVGCLAAQLALGKPIFGGRTRKQQLEYVFKCCGSPGQGRWPEGNKAPLYRHLRPVDKEGKSLHFKPRLDKVL-------AAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDAL-ASPYFA 1667
BLAST of NO27G00550 vs. NCBI_GenBank
Match: EJK57230.1 (hypothetical protein THAOC_22753 [Thalassiosira oceanica]) HSP 1 Score: 94.0 bits (232), Expect = 3.600e-15 Identity = 78/268 (29.10%), Postives = 122/268 (45.52%), Query Frame = 0 Query: 689 LAFSPPLFTLASLL-KHTTLSSRGPALSPALLRALTHSLLSAVEWCHSRGVVIKNVDPNLIFLDEEGRIRLGCFEEAVALPAXXXXXXXXXXXXXXXEKELKGKQLEGVKRAMEEMWDEGKRRKKNLVAPEVVLGGDA-SPMSDCWSMGCLLSLLLLSRPLFDARSNGQLMEHVYRVVGSYD-GVWKQGTSLPYYHLCKPQRASGYAPRVEKYVRGLVEKA----SKEGREGWREDGAG---VVVGLVRLDPTKRATARECLEKAPFL 947 L P L ++ ++ S G L P +L + H +LSA+ +CHS +V++++ P+ I+LD G +L + + L +K KGK + V + APE++LGG + +D W+ G L + LLL + LF + M V+++VG D G ++ PYY + G + +KYVRG VEKA K +ED AG ++ GL+ LDP KR +A E L F+ Sbjct: 1035 LVLEPTPINLQKVMSRYQRKSGGGKILPPNVLASWCHDILSAISFCHSNHIVLRSMLPDQIYLDHSGTAKLSGLSKIMVLHGKDRTKDFNPLKFVRSKKG-KGKSSDDV---------------EPFAAPELLLGGTRHTKETDMWAFGALTANLLLGKQLFPGKDRVSKMTQVFKIVGVPDKGNYEHAKRFPYY--SRNMHVIGDGGKKKKYVRG-VEKALRHMVKSFESDAQEDFAGLTNLLDGLLHLDPKKRMSADEALRHPYFM 1283
BLAST of NO27G00550 vs. NCBI_GenBank
Match: PAA61055.1 (hypothetical protein BOX15_Mlig006145g1 [Macrostomum lignano]) HSP 1 Score: 75.9 bits (185), Expect = 1.000e-9 Identity = 66/246 (26.83%), Postives = 106/246 (43.09%), Query Frame = 0 Query: 702 LKHTTLSSRGPALSPALLRALTHSLLSAVEWCHSRGVVIKNVDPNLIFLDEEGRIRLGCFEEAVALPAXXXXXXXXXXXXXXXEKELKGKQLEGVKRAMEEMWDEGKRRKKNLVAPEVVLGGDA-SPMSDCWSMGCLLSLLLLSRPLFDARSNGQLMEHVYRVVGS-YDGVWKQGTSLPYYHLCKPQRASGYAPRVEKYVRGLVEKASKEGREGWREDGAGVVVGLVRLDPTKRATARECLEKAPF 946 LK + RG +L P R+ + LL + +CH+R VV +++ P I LDE G I+L F A A G + + + +W APE++LG S D WSMGC+ + + + +PLF S + ++R++G+ + W TS+P Y P +GL ++ E R ++G ++ L+ +P+ R ARE LE A F Sbjct: 102 LKKYLDNQRGRSLIPEKTRSFMYQLLQGLLFCHTRRVVHRDLKPQNILLDERGVIKLADFGLARAF----------------------GVPVRVLTHEVVTLWYR---------APEILLGSPRYSCPVDMWSMGCIFAEIAMLKPLFHGDSEIDQLFRIFRILGTPTEDTWPGVTSMPEYKQMFPT------------WQGLRLSSAVENR--LNDEGMDLLQKLLIYEPSDRCNAREALEHAYF 302
BLAST of NO27G00550 vs. NCBI_GenBank
Match: PAA65802.1 (hypothetical protein BOX15_Mlig021093g2 [Macrostomum lignano]) HSP 1 Score: 75.5 bits (184), Expect = 1.300e-9 Identity = 66/246 (26.83%), Postives = 105/246 (42.68%), Query Frame = 0 Query: 702 LKHTTLSSRGPALSPALLRALTHSLLSAVEWCHSRGVVIKNVDPNLIFLDEEGRIRLGCFEEAVALPAXXXXXXXXXXXXXXXEKELKGKQLEGVKRAMEEMWDEGKRRKKNLVAPEVVLGGDA-SPMSDCWSMGCLLSLLLLSRPLFDARSNGQLMEHVYRVVGS-YDGVWKQGTSLPYYHLCKPQRASGYAPRVEKYVRGLVEKASKEGREGWREDGAGVVVGLVRLDPTKRATARECLEKAPF 946 LK + RG L P R+ + LL + +CH+R VV +++ P I LDE G I+L F A A G + + + +W APE++LG S D WSMGC+ + + + +PLF S + ++R++G+ + W TS+P Y P +GL ++ E R ++G ++ L+ +P+ R ARE LE A F Sbjct: 102 LKKYLDNQRGRTLIPEKTRSFMYQLLQGLLFCHTRRVVHRDLKPQNILLDERGVIKLADFGLARAF----------------------GVPVRVLTHEVVTLWYR---------APEILLGSPRYSCPVDMWSMGCIFAEIAMLKPLFHGDSEIDQLFRIFRILGTPTEDTWPGVTSMPEYKQMFPT------------WQGLRLSSAVENR--LNDEGMDLLQKLLIYEPSDRCNAREALEHAYF 302
BLAST of NO27G00550 vs. NCBI_GenBank
Match: XP_018914243.1 (PREDICTED: cyclin-dependent kinase 2-like [Bemisia tabaci] >XP_018914244.1 PREDICTED: cyclin-dependent kinase 2-like [Bemisia tabaci] >XP_018914245.1 PREDICTED: cyclin-dependent kinase 2-like [Bemisia tabaci]) HSP 1 Score: 75.1 bits (183), Expect = 1.700e-9 Identity = 62/241 (25.73%), Postives = 100/241 (41.49%), Query Frame = 0 Query: 713 ALSPALLRALTHSLLSAVEWCHSRGVVIKNVDPNLIFLDEEGRIRLGCFEEAVALPAXXXXXXXXXXXXXXXEKELKGKQLEGVKRAMEEMWDEGKRRKKNLVAPEVVLGGDA-SPMSDCWSMGCLLSLLLLSRPLFDARSNGQLMEHVYRVVGSYD-GVWKQGTSLPYYHLCKP----QRASGYAPRVEKYVRGLVEKASKEGREGWREDGAGVVVGLVRLDPTKRATARECLEKAPFLA 948 +LS +L+++ H L+SA+++CH ++ +++ P + +DE G I+L F A A G L + +W APE++LG + D WS+GC+ + +L +PLF S + ++R +G+ D W T LP Y P Q PR++ E+G + LV+ DP R +AR L K PF A Sbjct: 97 SLSISLIKSYLHQLISAIDYCHRHLIIHRDLKPQNLLIDEVGHIKLADFGLARAF----------------------GLPLRCFTHEVVTLWYR---------APEILLGTKIYTTAVDLWSVGCIFAEMLTKKPLFPGDSEIDQLFRIFRTLGTPDEDSWPGVTQLPDYKAVFPYWEQQELKEVVPRLD-------------------EEGIDLFSKLVKYDPVSRISARSAL-KHPFFA 286
BLAST of NO27G00550 vs. NCBI_GenBank
Match: PAA68218.1 (hypothetical protein BOX15_Mlig025638g1 [Macrostomum lignano]) HSP 1 Score: 75.1 bits (183), Expect = 1.700e-9 Identity = 66/246 (26.83%), Postives = 105/246 (42.68%), Query Frame = 0 Query: 702 LKHTTLSSRGPALSPALLRALTHSLLSAVEWCHSRGVVIKNVDPNLIFLDEEGRIRLGCFEEAVALPAXXXXXXXXXXXXXXXEKELKGKQLEGVKRAMEEMWDEGKRRKKNLVAPEVVLGGDA-SPMSDCWSMGCLLSLLLLSRPLFDARSNGQLMEHVYRVVGS-YDGVWKQGTSLPYYHLCKPQRASGYAPRVEKYVRGLVEKASKEGREGWREDGAGVVVGLVRLDPTKRATARECLEKAPF 946 LK + RG L P R+ + LL + +CH+R VV +++ P I LDE G I+L F A A G + + + +W APE++LG S D WSMGC+ + + + +PLF S + ++R++G+ + W TS+P Y P +GL ++ E R ++G ++ L+ +P+ R ARE LE A F Sbjct: 102 LKKYLDNQRGRTLIPEKTRSFMYQLLQGLLFCHTRRVVHRDLKPQNILLDERGVIKLADFGLARAF----------------------GVPVRVLTHEVVTLWYR---------APEILLGSPRYSCPVDMWSMGCIFAEIAMLKPLFHGDSEIDQLFRIFRILGTPTEDTWPGVTSMPEYKQMFPT------------WQGLRLSSAIENR--LNDEGMDLLQKLLIYEPSDRCNAREALEHAYF 302
BLAST of NO27G00550 vs. NCBI_GenBank
Match: GAX77887.1 (hypothetical protein CEUSTIGMA_g5329.t1 [Chlamydomonas eustigma]) HSP 1 Score: 75.1 bits (183), Expect = 1.700e-9 Identity = 55/261 (21.07%), Postives = 119/261 (45.59%), Query Frame = 0 Query: 687 LFLAFSPPLFTLASLLKHTTLSSRGPALSPALLRALTHSLLSAVEWCHSRGVVIKNVDPNLIFLDEEGRIRLGCFEEAVALPAXXXXXXXXXXXXXXXEKELKGKQLEGVKRAMEEMWDEGKRRKKNLVAPEVVLGGDA-SPMSDCWSMGCLLSLLLLSRPLFDARSNGQLMEHVYRVVGS-YDGVWKQGTSLPYYHLCKPQRASGYAPRVEKYVRGLVEKASKEGREGWREDGAGVVVGLVRLDPTKRATARECLEKAPF 946 +++AF + L L++ + A ++ + LL + + H GV+ +++ + I +D+ G ++L F A + + KQ + + +W PE++LG + P D WS+GC+L+ LL+ +P+F ++ ++R +G+ + W + LP++ P + G ++K+++ + +KA+ G++ ++D ++ L+ LDP KR TA + + + F Sbjct: 124 IYMAFDYSEYDLTGLMESVKYK-----FTEAQVKCIMKQLLKGLAYVHGNGVLHRDLKASNILIDKHGIVKLADFGLA---------------------RTYQNKQDGRLTNRVITLWYR---------PPELLLGSEKYGPEIDMWSVGCILAELLVGKPIFPGNDEMDQLDKIFRTLGTPSEQTWPNFSKLPFHDKVPPSKYKG--NNLKKWLKDMAQKAN-FGKDHVKDDAVALLEKLLSLDPAKRITAVDAIRDSWF 346
BLAST of NO27G00550 vs. NCBI_GenBank
Match: BAA23218.1 (p34cdc2 [Hemicentrotus pulcherrimus]) HSP 1 Score: 73.9 bits (180), Expect = 3.800e-9 Identity = 66/271 (24.35%), Postives = 112/271 (41.33%), Query Frame = 0 Query: 678 EDEIASSPYLFLAFSPPLFTLASLLKHTTLSSRGPALSPALLRALTHSLLSAVEWCHSRGVVIKNVDPNLIFLDEEGRIRLGCFEEAVALPAXXXXXXXXXXXXXXXEKELKGKQLEGVKRAMEEMWDEGKRRKKNLVAPEVVLGGD--ASPMSDCWSMGCLLSLLLLSRPLFDARSNGQLMEHVYRVVGS-YDGVWKQGTSLPYYHLCKPQRASGYAPRVEKYVRGLVEKASKEGREGWREDGAGVVVGLVRLDPTKRATARECLEKAPF 946 ED + L+L F L LK S +G + PAL+++ H ++ + +CHSR ++ +++ P + +D G I+L F A A G + + +W APEV+LG A P+ D WS+GC+ + ++ RPLF S + ++R +G+ D +W T L Y P P ++ V+G+ E+G ++ ++ DP KR TA+ + F Sbjct: 67 EDVLMEPNRLYLVFE----YLTMDLKKYMESLKGKQMDPALVKSYLHQMVDGILFCHSRRILHRDLKPQNLLIDNNGTIKLADFGLARAF----------------------GIPVRVYTHEVVTLWYR---------APEVLLGSTRYACPI-DMWSLGCIFAEMVTKRPLFHGDSEIDQLFRIFRTLGTPTDEIWPGVTQLQDYKSTFPMWTK---PNIKGAVKGM------------DEEGLDLLEKMLIYDPAKRITAKASMRHPYF 286
BLAST of NO27G00550 vs. NCBI_GenBank
Match: OZF83926.1 (hypothetical protein FL83_23730, partial [Caenorhabditis latens]) HSP 1 Score: 73.9 bits (180), Expect = 3.800e-9 Identity = 64/256 (25.00%), Postives = 111/256 (43.36%), Query Frame = 0 Query: 687 LFLAFSPPLFTLASLLKHTTLSSRGPALSPALLRALTHSLLSAVEWCHSRGVVIKNVDPNLIFLDEEGRIRLGCFEEAVALPAXXXXXXXXXXXXXXXEKELKGKQLEGVKRAMEEMWDEGKRRKKNLVAPEVVLGGDASPMS-DCWSMGCLLSLLLLSRPLFDARSNGQLMEHVYRVVGSYDGV-WKQGTSLPYYHLCKPQRASGYAPRVEKYVRGLVEKASKEGREGWREDGAGVVVGLVRLDPTKRATARECL 941 L+L F F L ++ + L+P +LR+ T +L A+ +CH R V+ +++ P + +D +G I+L F A A+ G + + +W APE+++G M D WS+GC+ + + +PLF S + ++RV+G+ + W SLP Y P+ Y R + Y + K GR+ EDG ++ GL+ DP R ++++ L Sbjct: 92 LYLIFE---FLSYDLKRYIDTLGKDEYLTPDVLRSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDSKGAIKLADFGLARAI----------------------GIPIRVYTHEVVTLWYR---------APEILMGAHRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRVLGTPTELEWNGVESLPDYKATFPKWRENYL-RDKFYDK-------KTGRKFMDEDGFSLLEGLLIYDPALRLSSKKAL 305 The following BLAST results are available for this feature:
BLAST of NO27G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00550 ID=NO27G00550|Name=NO27G00550|organism=Nannochloropsis oceanica|type=gene|length=4791bpback to top protein sequence of NO27G00550.2 >NO27G00550.2-protein ID=NO27G00550.2-protein|Name=NO27G00550.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1248bpback to top protein sequence of NO27G00550.1 >NO27G00550.1-protein ID=NO27G00550.1-protein|Name=NO27G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1330bpback to top Synonyms
Publications
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