NO27G00530, NO27G00530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00530 vs. NCBI_GenBank
Match: GAQ90820.1 (phosphoglycerate mutase [Klebsormidium nitens]) HSP 1 Score: 139.4 bits (350), Expect = 3.900e-29 Identity = 87/223 (39.01%), Postives = 109/223 (48.88%), Query Frame = 0 Query: 398 KTILFIRHAEGTHNQAAREEGEGAYKSWAWEDAELTTVGIAQAQDGLRRRVRGREXXXXXXXXXXXXXXAVDLVVVSPLRRTLHTAMLAFGDEGGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKFPPFVAMEAVRETAGMDPCNKRSNVSYLTKRFPLVDFSEIQSETDVLFDPCAWESEESMAARGHYFLHWLGKRTERRIAVVTHGSFL 621 KTI IRHA+G HN A E+ AYKSW W DA LT +G +Q + LRR + +DLVVVSPL RTL TA FG K PPFVA E RE G+ PC+ R ++S+ K FP VDFS+++SE DVL+ P ES++ + R H+F+ WL +R E RIAVVTH FL Sbjct: 16 KTIFLIRHAQGHHN-VAGEKDIAAYKSWDWADASLTPLGFSQTR-SLRRHL-----------AQLSPAPRLDLVVVSPLTRTLQTACAVFGTPADEK------------PPSAGDQQAAPVLMLPSDEAPGFTSSGAPPFVATELCREHYGLHPCDARQSLSHYAKTFPAVDFSQVESEEDVLWKPDIRESDDDLLERSHHFVKWLLQRPEERIAVVTHSGFL 213
BLAST of NO27G00530 vs. NCBI_GenBank
Match: XP_017249412.1 (PREDICTED: phosphoglycerate mutase-like protein 1 isoform X1 [Daucus carota subsp. sativus]) HSP 1 Score: 131.7 bits (330), Expect = 8.100e-27 Identity = 108/322 (33.54%), Postives = 142/322 (44.10%), Query Frame = 0 Query: 350 FGSSSPSLLP---LKEGEMAFPS--YPSCSSSSS------CHPPSLVC-------PGSVLVKKDRVKTILFIRHAEGTHNQAAREEGEGAYKSWAWEDAELTTVGIAQAQDGLRRRVRGREXXXXXXXXXXXXXXAVDLVVVSPLRRTLHTAMLAFGDEGGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKFPPFVAMEAVRETAGMDPCNKRSNVSYLTKRFPLVDFSEIQSETDVLFDPCAWESEESMAARGHYFLHWLGKRTERRIAVVTHGSFLMTMFERV-----LQAPKEMREWMGNAECRAVAV 649 F S P++ P L++ FPS P+ SSSS+ C PS+V PG+ + R KTI +RHA+G HN A E+ AY S DA LT +G Q D L + V V+LVVVSPL RT+ TA+ FG E G K PPF+A+E RE G+ PC++R ++S FP +DFS I++E DVL+ E E +AARG FL WL R E+ IAVVTH FL+ EM + N E R+V + Sbjct: 33 FLSPPPNINPLYSLRDPVSFFPSNTKPNRSSSSTYFPTLRCSSPSVVADMGSNPIPGTSVYPLHRSKTIHLVRHAQGIHN-VAGEKDHSAYLSQELFDAHLTPLGWQQV-DNLHKHVHA-----------SGIIDRVELVVVSPLLRTMQTAVGTFGGEAGA---------------DGTNVPPLMMENAGKSNRPAISSSKCPPFIAVELCREHMGVHPCDQRRSISEYKPIFPAIDFSLIENEDDVLWKADVREKNEEVAARGKKFLDWLWTRKEKEIAVVTHSGFLVHTLREFGDDCHPSIKSEMGTFFNNCELRSVVI 326
BLAST of NO27G00530 vs. NCBI_GenBank
Match: CBN79400.1 (catalytic, putative [Ectocarpus siliculosus]) HSP 1 Score: 130.6 bits (327), Expect = 1.800e-26 Identity = 89/258 (34.50%), Postives = 113/258 (43.80%), Query Frame = 0 Query: 391 LVKKDRVKTILFIRHAEGTHNQAAREEGEGAYKSWAWEDAELTTVGIAQAQDGLRRRVRGREXXXXXXXXXXXXXXAVDLVVVSPLRRTLHTAMLAFGDEGGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKFPPFVAMEAVRETAGMDPCNKRSNVSYLTKRFPLVDFSEIQSETDVLFDPCAWESE--ESMAARGHYFLHWLGKRTERRIAVVTHGSFLMTMFERVLQAPKEMREWMGNAECRAV 647 +V++ + KT+ FIRHAEGTHN+AA +EG AY DA LT +G Q L+ G E LVVVSPL R + TA L G P+VA+E VRE AG PC++R VS L +P + F I+ E DV FD E E + MA RG WL R E I VVTH +FL+ +F +QA E +W N E R+V Sbjct: 21 VVQRSKAKTVHFIRHAEGTHNEAALKEGRAAYAKIEHLDARLTDLGKQQCAT-LKATKHGIE-------------KEAQLVVVSPLARAIQTATLTIDQVEG------------------------------------------VPWVALECVRERAGAHPCDRRRCVSELKGEYPNISFDAIKDEKDVYFDSLGEEREPNDLMADRGRELFSWLKDRPETNIVVVTHSAFLLCLFNEAMQAAPETAKWFENCELRSV 222
BLAST of NO27G00530 vs. NCBI_GenBank
Match: XP_014505095.1 (phosphoglycerate mutase-like protein 1 isoform X1 [Vigna radiata var. radiata] >XP_022637850.1 phosphoglycerate mutase-like protein 1 isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 130.2 bits (326), Expect = 2.400e-26 Identity = 87/266 (32.71%), Postives = 120/266 (45.11%), Query Frame = 0 Query: 388 GSVLVKKDRVKTILFIRHAEGTHNQAAREEGEGAYKSWAWEDAELTTVGIAQAQDGLRRRVRGREXXXXXXXXXXXXXXAVDLVVVSPLRRTLHTAMLAFGDEGGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKFPPFVAMEAVRETAGMDPCNKRSNVSYLTKRFPLVDFSEIQSETDVLFDPCAWESEESMAARGHYFLHWLGKRTERRIAVVTHGSFLMTMFERV-----LQAPKEMREWMGNAECRAVAV 649 G +L R KT+ +RHA+G HN A E+ Y S+ + DA LT +G Q D LR+ V+ V+LVVVSPL RT+ TA+ FG E PPF+A+E RE G+ PC+KR +S FP +DFS I++E D+L+ P E E+++ARG FL WL R E+ IA+VTH SFL E+R+ N E R++ + Sbjct: 6 GQILYPLHRCKTVHLVRHAQGVHN-VAGEKNHDEYMSYDYFDAHLTPLGWNQV-DNLRKHVKA-----------TGLSKTVELVVVSPLLRTMQTAVGVFGGE---------------VYTDGISEQPLMMENVGHSDHLAVSSLNCPPFIAVELCREQIGVHPCDKRRTISEYRNMFPAIDFSLIENEEDILWKPDVREKVEAVSARGLKFLEWLWTRKEKEIAIVTHSSFLFNTLRAFGNDCHPNIKSEIRKHFTNCELRSMVI 243
BLAST of NO27G00530 vs. NCBI_GenBank
Match: XP_017249413.1 (PREDICTED: phosphoglycerate mutase-like protein 1 isoform X2 [Daucus carota subsp. sativus]) HSP 1 Score: 130.2 bits (326), Expect = 2.400e-26 Identity = 107/321 (33.33%), Postives = 141/321 (43.93%), Query Frame = 0 Query: 350 FGSSSPSLLP---LKEGEMAFPS--YPSCSSSSS------CHPPSLV------CPGSVLVKKDRVKTILFIRHAEGTHNQAAREEGEGAYKSWAWEDAELTTVGIAQAQDGLRRRVRGREXXXXXXXXXXXXXXAVDLVVVSPLRRTLHTAMLAFGDEGGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKFPPFVAMEAVRETAGMDPCNKRSNVSYLTKRFPLVDFSEIQSETDVLFDPCAWESEESMAARGHYFLHWLGKRTERRIAVVTHGSFLMTMFERV-----LQAPKEMREWMGNAECRAVAV 649 F S P++ P L++ FPS P+ SSSS+ C PS+ PG+ + R KTI +RHA+G HN A E+ AY S DA LT +G Q D L + V V+LVVVSPL RT+ TA+ FG E G K PPF+A+E RE G+ PC++R ++S FP +DFS I++E DVL+ E E +AARG FL WL R E+ IAVVTH FL+ EM + N E R+V + Sbjct: 33 FLSPPPNINPLYSLRDPVSFFPSNTKPNRSSSSTYFPTLRCSSPSVADMGSNPIPGTSVYPLHRSKTIHLVRHAQGIHN-VAGEKDHSAYLSQELFDAHLTPLGWQQV-DNLHKHVHA-----------SGIIDRVELVVVSPLLRTMQTAVGTFGGEAGA---------------DGTNVPPLMMENAGKSNRPAISSSKCPPFIAVELCREHMGVHPCDQRRSISEYKPIFPAIDFSLIENEDDVLWKADVREKNEEVAARGKKFLDWLWTRKEKEIAVVTHSGFLVHTLREFGDDCHPSIKSEMGTFFNNCELRSVVI 325
BLAST of NO27G00530 vs. NCBI_GenBank
Match: KFK40904.1 (hypothetical protein AALP_AA2G058400 [Arabis alpina]) HSP 1 Score: 129.8 bits (325), Expect = 3.100e-26 Identity = 91/267 (34.08%), Postives = 126/267 (47.19%), Query Frame = 0 Query: 387 PGSVLVKKDRVKTILFIRHAEGTHNQAAREEGEGAYKSWAWEDAELTTVGIAQAQDGLRRRVRGREXXXXXXXXXXXXXXAVDLVVVSPLRRTLHTAMLAFGDEGGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKFPPFVAMEAVRETAGMDPCNKRSNVSYLTKRFPLVDFSEIQSETDVLFDPCAWESEESMAARGHYFLHWLGKRTERRIAVVTHGSFLMTMF-----ERVLQAPKEMREWMGNAECRAVAV 649 P L R KTI +RHA+G HN A E+ Y S DA LT +G Q D LR+ V+ ++LVVVSPL RTL TA+ FG E G ++G PPF+A+E+ RE G+ PC++RSN++ + FP +DFS I+++ DVL+ P E ++ +AARG F++WL R E+ IAVVTH FL T + V E+ N E R+V + Sbjct: 48 PSQGLYPLHRCKTIHLVRHAQGIHN-VAGEKNHDNYLSEDLFDAHLTPLGWQQV-DNLRKHVKA-----------TGISSRIELVVVSPLLRTLQTAVGTFGGE-GYRDGVDTPPLMMAGAGNSDRPAISSL--------------NCPPFIAVESCREHLGVHPCDRRSNITKYRELFPAIDFSLIETDEDVLWTPNIREEDKDIAARGVKFMNWLSTRKEKEIAVVTHSGFLYTTLNSFGNDCVPAVKSEISSHFANCELRSVVL 286
BLAST of NO27G00530 vs. NCBI_GenBank
Match: XP_023744790.1 (phosphoglycerate mutase-like protein 1 [Lactuca sativa] >XP_023744791.1 phosphoglycerate mutase-like protein 1 [Lactuca sativa]) HSP 1 Score: 129.8 bits (325), Expect = 3.100e-26 Identity = 92/268 (34.33%), Postives = 120/268 (44.78%), Query Frame = 0 Query: 386 CPGSVLVKKDRVKTILFIRHAEGTHNQAAREEGEGAYKSWAWEDAELTTVGIAQAQDGLRRRVRGREXXXXXXXXXXXXXXAVDLVVVSPLRRTLHTAMLAFGDEGGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKFPPFVAMEAVRETAGMDPCNKRSNVSYLTKRFPLVDFSEIQSETDVLFDPCAWESEESMAARGHYFLHWLGKRTERRIAVVTHGSFLMTMFERV-----LQAPKEMREWMGNAECRAVAV 649 C L R KTI +RHA+G HN A E+ AY S DA+LT +G Q D LR+ V ++LVVVSPL RT+ TA+ AFG EG G PPF+A+E RE G+ PC++R ++S FP +DFS I++E DVL+ P E E +AARG F+ WL R E+ IAVVTH FL KEM + N E R++ + Sbjct: 4 CASEGLYPLHRSKTIHLVRHAQGIHN-VAGEKDHSAYLSEQLFDAQLTPLGWQQV-DNLRKHVHA-----------SGLSKRIELVVVSPLLRTMQTAVGAFGGEGSG----------------LGDGNPLMAQNTGKSNRPAISSLNSPPFIAVELCREHLGVHPCDRRRSISEYKPMFPAIDFSLIENEGDVLWTPDTREKNEDVAARGVKFMKWLLTREEKEIAVVTHSGFLFHTLAAYGDDCHPTLKKEMSKHFNNCELRSMVI 242
BLAST of NO27G00530 vs. NCBI_GenBank
Match: XP_017430455.1 (PREDICTED: phosphoglycerate mutase-like protein 1 isoform X1 [Vigna angularis] >XP_017430456.1 PREDICTED: phosphoglycerate mutase-like protein 1 isoform X1 [Vigna angularis] >XP_017430457.1 PREDICTED: phosphoglycerate mutase-like protein 1 isoform X1 [Vigna angularis] >KOM47558.1 hypothetical protein LR48_Vigan07g126200 [Vigna angularis] >BAT81663.1 hypothetical protein VIGAN_03144600 [Vigna angularis var. angularis]) HSP 1 Score: 128.6 bits (322), Expect = 6.900e-26 Identity = 87/266 (32.71%), Postives = 121/266 (45.49%), Query Frame = 0 Query: 388 GSVLVKKDRVKTILFIRHAEGTHNQAAREEGEGAYKSWAWEDAELTTVGIAQAQDGLRRRVRGREXXXXXXXXXXXXXXAVDLVVVSPLRRTLHTAMLAFGDEGGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKFPPFVAMEAVRETAGMDPCNKRSNVSYLTKRFPLVDFSEIQSETDVLFDPCAWESEESMAARGHYFLHWLGKRTERRIAVVTHGSFLMTMFERV-----LQAPKEMREWMGNAECRAVAV 649 G +L R KT+ +RHA+G HN A E+ Y S+ + DA LT +G Q ++ L++ V+ V+LVVVSPL RT+ TA+ FG E PPF+A+E RE G+ PC+KR +S FP +DFS I+SE D+L+ P E E+++ARG FL WL R E+ IAVVTH SFL E+R+ N E R++ + Sbjct: 6 GQILYPLHRCKTVHLVRHAQGVHN-VAGEKNHDEYMSYDYFDAHLTPLGWNQVEN-LQKHVKA-----------TGLSKTVELVVVSPLLRTMQTAVGVFGGE---------------VYTDGISEQPLMMENVGHSDHLAVSSLNCPPFIAVELCREQIGLHPCDKRRTISEYRNMFPAIDFSLIESEEDILWKPDVREKVEAVSARGLKFLEWLWTRKEKEIAVVTHSSFLFHTLRAFGKDCHPNIKSEIRKHFTNCELRSMVI 243
BLAST of NO27G00530 vs. NCBI_GenBank
Match: XP_020240354.1 (phosphoglycerate mutase-like protein 1 [Cajanus cajan] >XP_020240355.1 phosphoglycerate mutase-like protein 1 [Cajanus cajan] >XP_020240356.1 phosphoglycerate mutase-like protein 1 [Cajanus cajan] >XP_020240357.1 phosphoglycerate mutase-like protein 1 [Cajanus cajan] >XP_020240358.1 phosphoglycerate mutase-like protein 1 [Cajanus cajan] >KYP41268.1 Uncharacterized protein C5H10.03 [Cajanus cajan]) HSP 1 Score: 127.9 bits (320), Expect = 1.200e-25 Identity = 82/233 (35.19%), Postives = 110/233 (47.21%), Query Frame = 0 Query: 388 GSVLVKKDRVKTILFIRHAEGTHNQAAREEGEGAYKSWAWEDAELTTVGIAQAQDGLRRRVRGREXXXXXXXXXXXXXXAVDLVVVSPLRRTLHTAMLAFGDEGGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKFPPFVAMEAVRETAGMDPCNKRSNVSYLTKRFPLVDFSEIQSETDVLFDPCAWESEESMAARGHYFLHWLGKRTERRIAVVTHGSFL 621 G L R KT+ +RHA+G HN A E+ YKS+ + DA LT +G Q D LR+ V+ +++LVVVSPL RT+ TA+ FG E PPF+A E RE G++PC+KR ++ FP +DFS I++E D+L+ P E E ++ARG FL WL R E+ IAVVTH SFL Sbjct: 6 GQTLYPLHRCKTVHLVRHAQGVHN-VAGEKNHDEYKSYDYFDAHLTPLGWEQV-DNLRKHVK-----------VCGLSKSIELVVVSPLLRTMQTAVGVFGGEA---------------YTDGIRKLPLMLENVGHSNHLAVSSLNCPPFIAEELCREQLGVNPCDKRRTITEYRSMFPAIDFSLIENEEDILWTPNVREKPEDVSARGLKFLEWLWTRKEKEIAVVTHSSFL 210
BLAST of NO27G00530 vs. NCBI_GenBank
Match: XP_021285182.1 (phosphoglycerate mutase-like protein 1 [Herrania umbratica]) HSP 1 Score: 127.9 bits (320), Expect = 1.200e-25 Identity = 86/225 (38.22%), Postives = 111/225 (49.33%), Query Frame = 0 Query: 396 RVKTILFIRHAEGTHNQAAREEGEGAYKSWAWEDAELTTVGIAQAQDGLRRRVRGREXXXXXXXXXXXXXXAVDLVVVSPLRRTLHTAMLAFGDEGGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKFPPFVAMEAVRETAGMDPCNKRSNVSYLTKRFPLVDFSEIQSETDVLFDPCAWESEESMAARGHYFLHWLGKRTERRIAVVTHGSFL 621 R KT+ +RHA+G HN A E+ AY S DA LT +G Q D LR+ VR +DLV+VSPL RT+ TA+ AFG E G K+G PPFVA+E RE G+ PC++R ++S FP +DFS I+S+ D+L++ A E E +A RG FL+WL R ER IAVVTH FL Sbjct: 60 RCKTLHLVRHAQGIHN-VAGEKDHAAYLSEELFDAHLTPLGWQQV-DNLRKHVR-----------ETGLSKKIDLVIVSPLLRTMQTAVGAFGGE-GYKDGIDIPPLMVENAGESHHPAISSL--------------NCPPFVAVELCREHLGVHPCDRRKSISEYRPLFPAIDFSLIESDEDILWEAKAREKNEEVAVRGMKFLNWLWTRKEREIAVVTHSGFL 256 The following BLAST results are available for this feature:
BLAST of NO27G00530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00530 ID=NO27G00530|Name=NO27G00530|organism=Nannochloropsis oceanica|type=gene|length=2142bpback to top protein sequence of NO27G00530.1 >NO27G00530.1-protein ID=NO27G00530.1-protein|Name=NO27G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=652bpback to top Synonyms
Publications
|