NO27G00470, NO27G00470 (gene) Nannochloropsis oceanica

Overview
NameNO27G00470
Unique NameNO27G00470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2728
Alignment locationchr27:172959..175686 +

Link to JBrowse

Properties
Property NameValue
DescriptionHistone-lysine N-methyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:172959..175686 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO27G00470 vs. NCBI_GenBank
Match: EWM21053.1 (suppressor of variegation 3-9 [Nannochloropsis gaditana])

HSP 1 Score: 65.9 bits (159), Expect = 2.600e-7
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:   97 LHSPLPCFPPPSSLGVSPLPFLPSGFEWIDAVVMPPGTQNR 138
            +H+PLPC PPP S G+ PLP LPS F W+D+VV+P GT NR
Sbjct:    1 MHTPLPCVPPPPSSGLPPLPLLPSTFRWVDSVVLPSGTHNR 41
The following BLAST results are available for this feature:
BLAST of NO27G00470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21053.12.600e-763.41suppressor of variegation 3-9 [Nannochloropsis gad... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL058nonsL058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL057nonsL057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR063ncniR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G00470.1NO27G00470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100221g6gene9375Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G00470.1NO27G00470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G00470 ID=NO27G00470|Name=NO27G00470|organism=Nannochloropsis oceanica|type=gene|length=2728bp
CCCCAACCTCCTCCTCCTCCTTCTCCTCCACATCCATTTTCTCGCCCTTG
CCCTTGTCCTTCACCTTTTTATTTCCATGTCCTTCCCCTCCTCCTTCCAT
TCCCTCCTCCTCCTCCTCCTCCTCATCCCCCGCCACCTCCCCCTCCTGGT
CCACCTCGCCCCCGCCCCGCTCATCTCTCTTCCTCTTCTTTTGCCCTGCT
CCCGATTTGTAACCCTCGCCCTCCCTGGTGGCCCCCCTCCTCTTCCCCTT
CTTCATCCTCATCTCCTCCCCAACCCTGTCCAATGGAAATCGCCTCATGT
CCAACGTCTCCCTCCAGCTGCGAGGCAACCCCGCATTCTTTCGTGCTTGT
TGGTACACTCCGACACTCACCTCCGCCTTATCCAAGACGAGCAAATAGCA
GCGATACCGATGGAATAAACCGACATCCACGTAGGGACAAGCACCGATTG
TAGTGACACTGACTTGCACGGTGCCTGCCGTCTCCTCCAAGAGTTCGCGT
GCTGCCACAACAGGTGCTTCCTCCCTCCCCACGGCATTCCCTCCAACCGC
CCCAACATCGTCCTCGTTTTCGTCTTTGTCTCTACCGAGACTGCTGATCC
GACCGCCCATCTCTCCCCACTCCCTTGCCCCGTCCGCATCCCAATTTTCC
TCTTCAACGAGCACAAGGTCATACTTCCCTTCCTCATGAGAAGGCGACAA
CAGCAAAACCCCTGCCCCTGTCAACCCCTCTTCCCCTTTTTTCAATCTTC
CTCCATCACTCCCACATTTGACACAACCCTTACAGCGCCATTCCCATGGA
TGCCCCCACTGACACCTTCCCTCCTGACAGTCCTTCCCGTCCCTGCACAT
CACATGTTGGTACATACATTCTTTGCGTTCCAATCGTATGCAGAACCCAC
CGGCCCGATAGAAACGGCAGGGCTTGGCCCATTCCCTCTTGTCTTCCCAG
GCTCGTGGGTGACCTTTCTGGCAATATCTAAAATCGGTGCAGTCAAGGCC
TTGAGGGCAGGGCTCGTGGAGAAAGGCACAGGTGGAGGGAAACAGGCGAG
TGCAGCGACCATACCGAAAAAAGGAACAATAACGCCGCTTGTGCGCGGCT
GGCGGGTTTGGTGGTGAAGATGATGATGATAGTAATGGTGGTGGTAGAGG
ATCAGGAACGGATGAGGAGGATACCTCGTCTCGGCCCTCGATCCCGCTCT
CATAATCGCCCCTGCAATTGGTGGTGCGATTGTTGTTGTTGTTGTCGTTG
TTGTTGTTGTTGTTGCTTCTGTTGCTGCTGCTTGCGTTGCTGCTACTGGC
AGTGGTGATGGCCAAGCTTGACATACTGTGATGATGTCGTGAAAGGGGGA
AATATGTGTTTGGTGTATGAGATTTATGTCGTCTGTTACCATTTTCAAGG
CGGCGGCGATTTGCATGACTGACGCCTTACGAAATTGAAGTCAGCTACCC
ACATCTACCCTGACAATCACACACTTGCTCACTCTTCCCACTGACACGGA
TACTAAACCTCTCGACACAGAGACAACTCCCCAAAACCTGTTTATTGCGG
AGGTGATTTGACGACGACGACACCAACCTCCTCTTGAAAAGACGACGAGC
CCAGCCCCTTCCTCCTTCTCCCTGCCCCTGCTCCTCTGCTTGCCCCTCAT
CACCTATCGCCTCTTGGTGCTCCTGCATATTCTCCTAGACGACCATCGCG
TCTATCGCCTACAAGACCATGGTTGCACCAGCTTATCGAACCTCGCAAAA
GAGACGGGGACTCCATACCGCTCAGAAAAGCGTTCCTACCACCATCCCCA
ATACCACGAGCAGCGGCATCTATAACAAAACATACCTTACCCATTGCAGC
AGGACTACATCATTGACAATGGTGCCGGATTGCTGCCTCTCTTATCTGGA
CCTGATGGACCTGGGTCGTCTCCTTCTCACGTCCCACCACCTCTACAAAG
TAGCGGGAGCCTTCATAAGgtaagcttttccttcagcaagaggtcctgat
gttgtacttcatgtctcaccattcctcttctcattctccacaacagCGTC
TTGCAAGCCGACATCACCCGGGGCCAAAGCCTGCTTCACTCTCCTCTGCC
ATGTTTCCCTCCACCCTCTTCACTGGGCGTTTCTCCCTTACCTTTTCTTC
CGTCTGGTTTTGAATGGATCGACGCCGTGGTGATGCCGCCAGGGACACAA
AATCGGCGCCTGCTGCCAGTAAAGAGGAGAAAGGAGGAGGAGGCAAAAGG
AGAGGAGGAGGAGGGGGAGGAAGAGGAAGAGGAGGAGGGGGAGGTTGGGG
GGGTTGTAATTGTGGTGAGCCTAGCAACAACAGCAACAGCAACAGCAACA
GCAACAGCAGCAGCGATTGCCAACAACAATGTAGTGATGGTGGTATCCCG
TCTTGTTGCCAGGATGCCTCCTGCCCATGCTTTCGCCGGGCCCACCGAAT
CAGTCGCCACACCACAAAGAGAATCAACGACGCCTCCAATGCTCCCTCAA
GGCAGCCGCTCTCCTCCTCCCTTCTACCCCTGTCGACATTTGAGTTTGAA
TGTTCCGCCCGCTGCCGTTGCCCCACCAAGCGTTGCAGCCTCCGTCCCAC
CCAAATCCGTCCTCCCCCAGTCCTTCAACTCCGATACACCACCGGCAAGG
GCTGGGGTGTCTTCTTCACCCCCCCCCCCTCCTTCCTTCCCTCCCTCCCT
CCCGATACATTTGTGGCCGAGTACGTAG
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protein sequence of NO27G00470.1

>NO27G00470.1-protein ID=NO27G00470.1-protein|Name=NO27G00470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bp
MVAPAYRTSQKRRGLHTAQKSVPTTIPNTTSSGIYNKTYLTHCSRTTSLT
MVPDCCLSYLDLMDLGRLLLTSHHLYKVAGAFISVLQADITRGQSLLHSP
LPCFPPPSSLGVSPLPFLPSGFEWIDAVVMPPGTQNRRLLPVKRRKEEEA
KGEEEEGEEEEEEEGEVGGVVIVVSLATTATATATATAAAIANNNVVMVV
SRLVARMPPAHAFAGPTESVATPQRESTTPPMLPQGSRSPPPFYPCRHLS
LNVPPAAVAPPSVAASVPPKSVLPQSFNSDTPPARAGVSSSPPPPPSFPP
SLPIHLWPST*
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Synonyms
Publications