NO27G00130, NO27G00130 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00130 vs. NCBI_GenBank
Match: WP_007221390.1 (cupin domain-containing protein [Candidatus Jettenia caeni] >GAB62277.1 conserved hypothetical protein [Candidatus Jettenia caeni]) HSP 1 Score: 93.6 bits (231), Expect = 7.100e-16 Identity = 46/117 (39.32%), Postives = 73/117 (62.39%), Query Frame = 0 Query: 70 QIMFVGDLPFKSVNHLPDAQGRFIQKQLLLSTNQIPSLTGFSRAVLKPGQTVERHTHASMHEVFWVESGKGTFLLDDMPTAVGRGWYMHVPPQQPHSIVNSAPASEGEDFVVLYFGI 187 +I+ + DLP + V+H P+ I+K++LL ++IP++TGFS+A + PGQ HTH +E+F+ E GKG +DD V +G + V P + HSI+N+A D V++YFG+ Sbjct: 2 KIVSLSDLPEEGVSHNPE-----IKKKVLLKKDEIPNVTGFSQARITPGQIAGSHTHDDRYEIFFFEEGKGIVRIDDKEYPVEKGVCIAVEPGEIHSIINTA----SSDLVLIYFGV 109
BLAST of NO27G00130 vs. NCBI_GenBank
Match: CBN79041.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 90.9 bits (224), Expect = 4.600e-15 Identity = 48/121 (39.67%), Postives = 65/121 (53.72%), Query Frame = 0 Query: 67 PKGQIMFVGDLPFKSVNHLPDAQGRFIQKQLLLSTNQIPSLTGFSRAVLKPGQTVERHTHASMHEVFWVESGKGTFLLDDMPTAVGRGWYMHVPPQQPHSIVNSAPASEGEDFVVLYFGIA 188 P+G ++ + +L VNH G +KQ ++ Q+P LTGF+RAV PG VE H H SM EVF+ GKGT +D + G +HV Q HS++N D V+ YFGIA Sbjct: 54 PRGGMVRLSELKSIPVNH----DGSGAKKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINKGDV----DMVLFYFGIA 166
BLAST of NO27G00130 vs. NCBI_GenBank
Match: PIU02211.1 (cupin domain-containing protein [Candidatus Shapirobacteria bacterium CG09_land_8_20_14_0_10_49_15] >PJE70119.1 cupin domain-containing protein [Candidatus Shapirobacteria bacterium CG10_big_fil_rev_8_21_14_0_10_48_15]) HSP 1 Score: 90.9 bits (224), Expect = 4.600e-15 Identity = 41/120 (34.17%), Postives = 70/120 (58.33%), Query Frame = 0 Query: 70 QIMFVGDLPFKSVNHLPDAQGRFIQKQLLLSTNQIPSLTGFSRAVLKPGQTVERHTHASMHEVFWVESGKGTFLLDDMPTAVGRGWYMHVPPQQPHSIVNSAPASEGEDFVVLYFGIAAD 190 +++ + +P + V H P+ I+KQ+L+ +IP LTGFS+AV KPGQ E H H +M+EV+++ G+ T + + + + P +PH VN++ +DF+ +YFG+A D Sbjct: 2 KLLHLAQIPAEGVAHQPE-----IKKQVLIKNGEIPQLTGFSQAVFKPGQACEEHRHPTMYEVYFLLEGEATLFISGREVKAAKNDCVVIEPGEPHRAVNNS----RQDFIWIYFGVATD 112
BLAST of NO27G00130 vs. NCBI_GenBank
Match: WP_099531741.1 (cupin domain-containing protein [Limnothrix sp. PR1529] >OCQ89174.1 cupin [Limnothrix sp. P13C2] >PIB15241.1 cupin [Limnothrix sp. PR1529]) HSP 1 Score: 87.8 bits (216), Expect = 3.900e-14 Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 0 Query: 74 VGDLPFKSVNHLPDAQGRFIQKQLLLSTNQIPSLTGFSRAVLKPGQTVERHTHASMHEVFWVESGKGTFLLDDMPTAVGRGWYMHVPPQQPHSIVNSAPASEGEDFVVLYFGIAA 189 + ++P + V+H P I KQ+LL +P LT FSRA PGQ H H+ MHEVF++E+G+GT ++D + G + + P + H I N+ P E+ V+ YFG+ A Sbjct: 6 LSEVPIERVSHNP-----AIAKQVLLRQGDLPHLTNFSRACFAPGQVSPGHAHSDMHEVFFIEAGQGTMIVDGQRFDLVPGVCLAIAPHEVHEIANTGP----EELVITYFGLRA 111
BLAST of NO27G00130 vs. NCBI_GenBank
Match: WP_085436246.1 (cupin domain-containing protein [unicellular cyanobacterium SU2]) HSP 1 Score: 86.7 bits (213), Expect = 8.700e-14 Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 0 Query: 77 LPFKSVNHLP---DAQGRFIQKQLLLSTNQIPSLTGFSRAVLKPGQTVERHTHASMHEVFWVESGKGTFLLDDMPTAVGRGWYMHVPPQQPHSIVNSAPASEGEDFVVLYFGIAAD 190 + F S++ LP + IQK+++L+ IP LT FS+AV PGQ V H H +M+EVF+VESG G L++D+ + G + V P++ H ++N+ + V+ YFGIA++ Sbjct: 1 MKFSSLSQLPIQVSNHNQAIQKKVMLTPGNIPHLTNFSQAVFTPGQKVIPHYHETMYEVFFVESGSGIILIEDVEYPLHPGNCITVEPKEKHELINTG----NTNLVLTYFGIASE 112
BLAST of NO27G00130 vs. NCBI_GenBank
Match: OKY71192.1 (cupin [Limnothrix sp. CACIAM 69d]) HSP 1 Score: 85.1 bits (209), Expect = 2.500e-13 Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 0 Query: 74 VGDLPFKSVNHLPDAQGRFIQKQLLLSTNQIPSLTGFSRAVLKPGQTVERHTHASMHEVFWVESGKGTFLLDDMPTAVGRGWYMHVPPQQPHSIVNSAPASEGEDFVVLYFGIAA 189 + ++P + V+H P I KQ+LL +P LT FS+A PGQ H H MHEVF++E+G+GT ++D + G + + P + H I N+ P E+ V+ YFG+ A Sbjct: 6 LSEVPIERVSHNP-----AIAKQVLLRQGDLPHLTNFSQARFAPGQVSPGHAHPDMHEVFFIEAGQGTMIIDGQRFDLVPGVCLAIAPHEVHEIANTGP----EELVITYFGLRA 111
BLAST of NO27G00130 vs. NCBI_GenBank
Match: WP_106256713.1 (cupin domain-containing protein [Leptolyngbya frigida] >PSB28621.1 cupin domain-containing protein [Leptolyngbya frigida ULC18]) HSP 1 Score: 82.4 bits (202), Expect = 1.600e-12 Identity = 42/120 (35.00%), Postives = 70/120 (58.33%), Query Frame = 0 Query: 70 QIMFVGDLPFKSVNHLPDAQGRFIQKQLLLSTNQIPSLTGFSRAVLKPGQTVERHTHASMHEVFWVESGKGTFLLDDMPTAVGRGWYMHVPPQQPHSIVNSAPASEGEDFVVLYFGIAAD 190 ++ + LP ++V+H P I+K+++LS ++P LT FS+A PGQ H+H++M EVF+VESG+GT ++D P ++ G + V + H I N+ D V+ YFG+ + Sbjct: 2 KVTSLSTLPEQAVSHNP-----AIKKKVMLSLGELPHLTNFSQARFAPGQIANAHSHSNMCEVFFVESGEGTIWINDAPYSLQSGTCVAVDVGEKHEICNTG----STDLVLTYFGLRVE 112
BLAST of NO27G00130 vs. NCBI_GenBank
Match: WP_016866216.1 (cupin domain-containing protein [Fischerella muscicola] >PLZ87122.1 cupin domain-containing protein [Fischerella muscicola CCMEE 5323]) HSP 1 Score: 82.0 bits (201), Expect = 2.100e-12 Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 0 Query: 70 QIMFVGDLPFKSVNHLPDAQGRFIQKQLLLSTNQIPSLTGFSRAVLKPGQTVERHTHASMHEVFWVESGKGTFLLDDMPTAVGRGWYMHVPPQQPHSIVNSAPASEGEDFVVLYFGIAA 189 +I+ + ++P + V+H P+ I+KQ++L ++P LT FS+A PGQT H H M EVF+VE+G G +++ ++ G + V P + H IVN+ A + V+ YFG+ A Sbjct: 2 KIVSLSEIPQEPVSHNPE-----IKKQVMLRLGELPGLTNFSQARFAPGQTASAHAHDDMCEVFFVEAGSGIIRINNQEYSLLPGTCVAVEPTETHEIVNNGTA----ELVLTYFGLRA 111
BLAST of NO27G00130 vs. NCBI_GenBank
Match: WP_106870625.1 (MULTISPECIES: cupin domain-containing protein [unclassified Cyanobacteria (miscellaneous)] >PSN11391.1 cupin domain-containing protein [filamentous cyanobacterium CCT1] >PSN77742.1 cupin domain-containing protein [filamentous cyanobacterium CCP4]) HSP 1 Score: 81.3 bits (199), Expect = 3.700e-12 Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 0 Query: 70 QIMFVGDLPFKSVNHLPDAQGRFIQKQLLLSTNQIPSLTGFSRAVLKPGQTVERHTHASMHEVFWVESGKGTFLLDDMPTAVGRGWYMHVPPQQPHSIVNSAPASEGEDFVVLYFGI 187 +I + +P ++V+H P I+K++LL + +P LT FS+A PGQ H+H M EVF+VESG GT +D P + G + V P + H + N+ E+ V+ YFG+ Sbjct: 2 KITGLDQVPEEAVSHNP-----AIKKRVLLRSRDLPHLTNFSQASFAPGQVANGHSHTDMAEVFFVESGHGTITIDGQPYPLTPGICIAVEPGEHHEVANTG----SEELVLTYFGL 109
BLAST of NO27G00130 vs. NCBI_GenBank
Match: WP_017661397.1 (cupin domain-containing protein [Geitlerinema sp. PCC 7105] >PPT07058.1 putative conserved protein contains double-stranded beta-helix domain [Geitlerinema sp. FC II]) HSP 1 Score: 80.1 bits (196), Expect = 8.200e-12 Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 0 Query: 76 DLPFKSVNHLPDAQGRFIQKQLLLSTNQIPSLTGFSRAVLKPGQTVERHTHASMHEVFWVESGKGTFLLDDMPTAVGRGWYMHVPPQQPHSIVNSAPASEGEDFVVLYFGI 187 ++P + V+H P+ I+KQ++L + +P LT F++A PGQ H+H+ M EVF+VESG GT +DD P + G + V + H I N+ A + V+ YFG+ Sbjct: 8 NIPTQGVSHNPN-----IRKQVMLKSGDLPHLTNFAQARFAPGQVAAAHSHSDMCEVFFVESGSGTIRIDDTPYPLEPGTCIAVEVGEVHEITNTGNA----ELVLTYFGL 109 The following BLAST results are available for this feature:
BLAST of NO27G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00130 ID=NO27G00130|Name=NO27G00130|organism=Nannochloropsis oceanica|type=gene|length=1515bpback to top protein sequence of NO27G00130.1 >NO27G00130.1-protein ID=NO27G00130.1-protein|Name=NO27G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=190bpback to top Synonyms
Publications
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