NO27G00070, NO27G00070 (gene) Nannochloropsis oceanica

Overview
NameNO27G00070
Unique NameNO27G00070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3053
Alignment locationchr27:20734..23786 -

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Properties
Property NameValue
DescriptionPeptide chain release factor 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:20734..23786 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003747translation release factor activity
GO:0008135translation factor activity, RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I_II
IPR005139PCRF
Homology
BLAST of NO27G00070 vs. NCBI_GenBank
Match: AMK98484.1 (mitochondrial peptide chain release factor 2 [Monodopsis sp. MarTras21])

HSP 1 Score: 388.3 bits (996), Expect = 3.800e-104
Identity = 206/360 (57.22%), Postives = 265/360 (73.61%), Query Frame = 0
Query:  121 SQKMDIEKKRRRLEVLTQTLEDEKSWTGEGGHEDMQPLITEAACLSDGVGLWDRLSLETAHIRDMAALAKQEGEEEVREECEERMAGLEKECEALRTQALLLSSPLDGGDCYLEIQAGAGGRESGDWVQMLRKMYEKWAAGHHDLGVETVHETWGENGGGLRSVLLLFKGPLAYGWSKTEAGVHRLVRISPFDTAQRRHTTFAQVRVYPASLPSXXXXXXXXXXAVHIDPKDLKIDTYRAQGAGGQHVNTTESAVRITHIPTASVVTCQADRSQHRNKAMALDVLRGRLLTQQQEKEKQLKATYTEGLGENGWGSQIRSYVLHPYLMIKDHRTGVEVAGGNVQRVLEGGDLDLFVEAALA 481
            S K+D++ KR +L+ L   LED+  W+ +        +  EAA L + +   DR+ +E  H+++MA LAK+EGE EV EEC +RMA LEKE + L+ Q LL+ SP D GDC+LEIQAGAGGRESGDWV+ML +MY+K+A       V+TV ETWGE GGGLRSV++   G LA+GW ++EAGVHRLVRISPFD+   RHT+FAQVRVYP S             A  I  KDLKIDTYR+QGAGGQHVNTT+SAVRI+H+PT  VVTCQADRSQHRNKA+A++VL+ +L   ++++ +  KATY EGLG+N WG+QIRSY+++PY M+KDHRTGVE+  G+V RVLE G+L+  +EAALA
Sbjct:  132 SDKLDLDSKRTKLDQLDGELEDDAVWSKDA--VAAGAMAKEAAQLVNQINRVDRIWMEIKHLKEMAHLAKEEGEVEVVEECNDRMAALEKESDKLQIQTLLIQSPADEGDCFLEIQAGAGGRESGDWVEMLLRMYQKFAE-KKGFVVDTVQETWGE-GGGLRSVMIKISGWLAHGWCRSEAGVHRLVRISPFDSKGSRHTSFAQVRVYPVS------SMNGSSAAETILSKDLKIDTYRSQGAGGQHVNTTDSAVRISHLPTGIVVTCQADRSQHRNKAVAMEVLKSKLQQLKEQEAQDEKATYREGLGKNEWGNQIRSYIINPYQMVKDHRTGVEL--GDVNRVLEQGELEPLIEAALA 479          
BLAST of NO27G00070 vs. NCBI_GenBank
Match: AMK98480.1 (mitochondrial peptide chain release factor 2 [Vischeria sp. CAUP Q 202])

HSP 1 Score: 342.0 bits (876), Expect = 3.100e-90
Identity = 193/370 (52.16%), Postives = 252/370 (68.11%), Query Frame = 0
Query:  121 SQKMDIEKKRRRLEVLTQTLEDEKSWTGEGGHEDMQPLITEAACLSDGVGLWDRLSLETAHIRDMAALAKQEGEEEVREECEERMAGLEKECEALRTQALL-LSSPLDGGDCYLEIQAGAGGRESGDWVQMLRKMYEKWAAGHHDLG--VETVHETWGENGGGLRSVLLLFKGPLAYGWSKTEAGVHRLVRISPFDTAQRRHTTFAQVRVYPASLPSXXXXXXXXXXAVHIDPKDLKIDTYRAQGAGGQHVNTTESAVRITHIPTASVVTCQADRSQHRNKAMALDVLRGRLLTQQQEKEKQLKATYTEGLGENGWGSQIRSYVLHPYLMIKDHRTGVEVAGGNVQRVLEGGDLDLFVEAALAASAMGEE 488
            SQK+DI   ++RL      LE E  W        M  L  EAA L+  +   + L+ E+  +++M  +A  EGE  + EEC +RM  L  + + L+ + LL  + P D G+C++EIQAGAGGRES DWV+ML +MY +WA    D G  V+++HE+ GE GGGLRSV +   G LA GW +TEAGVHRLVR+SPFD  ++RHT+FAQVRV+P S  S          AV I  KDL+IDTYR+QGAGGQ VNTT+SAVR+ H+PT  V TCQ +RSQHRNKAMALDVLR +L   Q+ K+++ +A+Y EGLG+N WG+QIRSY L PY ++KDHRTGVE+  GNV RVL+ GD+D  VE ALAA+A+  +
Sbjct:  107 SQKVDILGCKKRLANTRDELEKEDVWKDP---HRMGDLSKEAARLAAEIDPVESLAKESRVLKEMYDMAVGEGEATIAEECADRMVQLAVDADKLQMEILLKANGPADEGNCFVEIQAGAGGRESADWVEMLLRMYTRWA---EDKGFRVQSLHESVGE-GGGLRSVTVKVDGHLAMGWFRTEAGVHRLVRMSPFDANKKRHTSFAQVRVFPESTSS-------SSSAVEIPAKDLRIDTYRSQGAGGQSVNTTDSAVRVVHLPTGLVATCQNERSQHRNKAMALDVLRAKLARLQEAKDERERASYVEGLGDNSWGNQIRSYTLQPYQLVKDHRTGVEI--GNVTRVLD-GDIDELVEGALAAAAVSND 459          
BLAST of NO27G00070 vs. NCBI_GenBank
Match: GAY05796.1 (peptide chain release factor 2 [Pythium insidiosum])

HSP 1 Score: 307.0 bits (785), Expect = 1.100e-79
Identity = 164/303 (54.13%), Postives = 209/303 (68.98%), Query Frame = 0
Query:  183 RDMAALAKQEGEEEVREECEERMAGLEKECEALRTQALLLSSPLDGGDCYLEIQAGAGGRESGDWVQMLRKMYEKWAAGHHDLGVETVHETWGENGGGLRSVLLLFKGPLAYGWSKTEAGVHRLVRISPFDTAQRRHTTFAQVRVYPASLPSXXXXXXXXXXAVHIDPKDLKIDTYRAQGAGGQHVNTTESAVRITHIPTASVVTCQADRSQHRNKAMALDVLRGRLLTQQQEKEKQLKATYTEGLGENGWGSQIRSYVLHPYLMIKDHRTGVEVAGGNVQRVLEGGDLDLFVEAALAASAMG 486
            + + A+A +E E++V +EC   M  L  +  ALR + L+LSS  D   C++EIQAGAGG ES DWV ML +MY++WA       V     + G+   G RS+ L   G  AYGW+KTEAGVHRLVR+SPFD+A RRHT+FAQVRVYP +              + I  KDL+IDTYR+ GAGGQHVNTT+SAVRITH+PT  VVTCQ+DRSQHRNKA A+D+LR +L  ++ E++   K  YT+GLGEN WGSQIRSYVLHPY M+KDHR  V+++  + +RVL+ GDLD F+EA L   A G
Sbjct:  110 KGLYAMASEEHEQDVMDECHANMGALLDQVRALRVE-LMLSSDSDLSSCFVEIQAGAGGTESCDWVAMLARMYQRWADARR-FDVHVADASPGDE-AGFRSICLRVDGAFAYGWAKTEAGVHRLVRLSPFDSAGRRHTSFAQVRVYPVA----ALAGASNSAVLEIPVKDLRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSDRSQHRNKAEAMDMLRAKLYQRELERQASAKHAYTQGLGENAWGSQIRSYVLHPYKMVKDHR--VQLSVSDAKRVLD-GDLDGFMEAMLLLDASG 402          
BLAST of NO27G00070 vs. NCBI_GenBank
Match: GAY04481.1 (peptide chain release factor 2 [Pythium insidiosum])

HSP 1 Score: 303.1 bits (775), Expect = 1.600e-78
Identity = 165/304 (54.28%), Postives = 209/304 (68.75%), Query Frame = 0
Query:  183 RDMAALAKQEGEEEVREECEERMAGLEKECEALRTQALLLSSPLDGGDCYLEIQAGAGGRESGDWVQMLRKMYEKWAAGHHDLGVETVHETWGENGGGLRSVLLLFKGPLAYGWSKTEAGVHRLVRISPFDTAQRRHTTFAQVRVYPASLPSXXXXXXXXXXAVH-IDPKDLKIDTYRAQGAGGQHVNTTESAVRITHIPTASVVTCQADRSQHRNKAMALDVLRGRLLTQQQEKEKQLKATYTEGLGENGWGSQIRSYVLHPYLMIKDHRTGVEVAGGNVQRVLEGGDLDLFVEAALAASAMG 486
            + + A+A +E E++V +EC   M  L  +  ALR + L+LSS  D   C++EIQAGAGG ES DWV ML +MY++WA       V     + G+   G RS+ L   G  AYGW+KTEAGVHRLVR+SPFD+A RRHT+FAQVRVYP +             AVH I  KDL+IDTYR+ GAGGQHVNTT+SAVRITH+PT  VVTCQ+DRSQHRNKA A+D+L  +L  ++ E++   K  YT+GLGEN WGSQIRSYVLHPY M+KDHR  V+++  + +RVL+ GDL  F+EA L   A G
Sbjct:  110 KGLYAMASEEHEQDVMDECHANMGALLDQVRALRVE-LMLSSESDLSSCFVEIQAGAGGTESCDWVAMLARMYQRWADARR-FDVHVADASPGDE-AGFRSICLRVDGAFAYGWAKTEAGVHRLVRLSPFDSAGRRHTSFAQVRVYPVA-----ALAGASNSAVHEIPVKDLRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSDRSQHRNKAEAMDMLXAKLYXRELERQASAKHAYTQGLGENAWGSQIRSYVLHPYKMVKDHR--VQLSVSDAKRVLD-GDLXGFMEAMLLLDASG 402          
BLAST of NO27G00070 vs. NCBI_GenBank
Match: XP_008862121.1 (peptide chain release factor 2 [Aphanomyces invadans] >ETW08316.1 peptide chain release factor 2 [Aphanomyces invadans])

HSP 1 Score: 298.9 bits (764), Expect = 3.100e-77
Identity = 160/302 (52.98%), Postives = 201/302 (66.56%), Query Frame = 0
Query:  183 RDMAALAKQEGEEEVREECEERMAGLEKECEALRTQALLLSSPLDGGDCYLEIQAGAGGRESGDWVQMLRKMYEKWAAGHHD-LGVETVHETWGENGGGLRSVLLLFKGPLAYGWSKTEAGVHRLVRISPFDTAQRRHTTFAQVRVYPASLPSXXXXXXXXXXAVHIDPKDLKIDTYRAQGAGGQHVNTTESAVRITHIPTASVVTCQADRSQHRNKAMALDVLRGRLLTQQQEKEKQLKATYTEGLGENGWGSQIRSYVLHPYLMIKDHRTGVEVAGGNVQRVLEGGDLDLFVEAALAASA 484
            +++  +A  E +  +  +C E +   +   +ALR + LLLS P D   C+LEI AGAGG ESGDWV+ML +MY +W   H D   VE VH   GE   G RSV L  +G  AYGW KTE GVHRLVRISPFD   RRHT+FAQVRV+P ++            A+ I  KDL+IDTYRA G GGQHVN TESA+RITH+PT  VV CQ+DRSQHRNK  A+D+LR RLL  +  KE + K  YT+GLG+N WGSQIRSYVLHPY M+KDHRT +  +  + + VL+ GD+  F++  L A+A
Sbjct:  117 KELFDMAMDENDVNLLRDCVETVGAADVTAKALRAE-LLLSEPTDSSSCFLEIHAGAGGTESGDWVEMLLRMYSRWTESHPDGYRVEVVHAVLGEE-AGYRSVCLRIEGSYAYGWLKTEGGVHRLVRISPFDNQSRRHTSFAQVRVFPLAV---HGGAKATAAAMEIFAKDLRIDTYRASGPGGQHVNKTESAIRITHLPTNIVVQCQSDRSQHRNKDTAMDMLRARLLQLELLKEDEEKKKYTQGLGDNTWGSQIRSYVLHPYKMVKDHRTNMSTS--DAKGVLD-GDISPFIQEVLLATA 410          
BLAST of NO27G00070 vs. NCBI_GenBank
Match: XP_012196934.1 (peptide chain release factor 2 [Saprolegnia parasitica CBS 223.65] >KDO32485.1 peptide chain release factor 2 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 293.1 bits (749), Expect = 1.700e-75
Identity = 163/328 (49.70%), Postives = 210/328 (64.02%), Query Frame = 0
Query:  158 LITEAACLSDGVGLWDRLSLETAHIRDMAALAKQEGEEEVREECEERMAGLEKECEALRTQALLLSSPLDGGDCYLEIQAGAGGRESGDWVQMLRKMYEKWAAGHHDLGVETVHETWGENGGGLRSVLLLFKGPLAYGWSKTEAGVHRLVRISPFDTAQRRHTTFAQVRVYP--ASLPSXXXXXXXXXXAVHIDPKDLKIDTYRAQGAGGQHVNTTESAVRITHIPTASVVTCQADRSQHRNKAMALDVLRGRLLTQQQEKEKQLKATYTEGLGENGWGSQIRSYVLHPYLMIKDHRTGVEVAGGNVQRVLEGGDLDLFVEAALAASA 484
            L+ + + L     + D+L       +++  LA +E EE+V   C   +A      + LR + LL+S P D   C+LEI AGAGG ES DWV ML +MY +W         E V+   G+   G RSV L   G  AYGW++TEAGVHRLVRISPFD+A RRHT+FAQVRV+P  A++P            + ID KDL+IDTYRA G GGQHVN TESA+RITH+PT  VV CQ+DRSQHRNK  A+++LR RLL  +   ++  +  YT+GLG+NGWGSQIRSYVLHPY M+KDHRT   V+  N   VL+ GD+  F++ AL A+A
Sbjct:   75 LLQQLSVLEKRDAMADQLQQTLDETKELFDLALEENEEDVVAGCVASVATASMSAKKLRAE-LLMSEPADPSSCFLEIHAGAGGTESCDWVDMLLRMYMRWGT-DQGFATELVNAVPGDE-AGYRSVCLRLDGSYAYGWTRTEAGVHRLVRISPFDSASRRHTSFAQVRVFPLAAAIPGASD--------IRIDVKDLRIDTYRASGPGGQHVNKTESAIRITHLPTNIVVQCQSDRSQHRNKDTAMEMLRARLLQLELIDQENERRKYTQGLGDNGWGSQIRSYVLHPYKMVKDHRT--NVSKSNTSAVLD-GDITPFIQEALLATA 388          
BLAST of NO27G00070 vs. NCBI_GenBank
Match: WP_106408566.1 (peptide chain release factor 2 [Arboriscoccus pini])

HSP 1 Score: 289.7 bits (740), Expect = 1.900e-74
Identity = 174/371 (46.90%), Postives = 224/371 (60.38%), Query Frame = 0
Query:  124 MDIEKKRRRLEVLTQTLEDEKSWTGEGGHEDMQPLITEAACLSDGVGLWDRLSLETAHIRDMAALAKQEGEEEVREECEERMAGLEKECEALRTQALLLSSPLDGGDCYLEIQAGAGGRESGDWVQMLRKMYEKWAAGHHDLGVETVHETWGENGGGLRSVLLLFKGPLAYGWSKTEAGVHRLVRISPFDTAQRRHTTFAQVRVYPASLPSXXXXXXXXXXAVHIDPKDLKIDTYRAQGAGGQHVNTTESAVRITHIPTASVVTCQADRSQHRNKAMALDVLRGRLLTQQQEKEKQLKATYTEGL----GENGWGSQIRSYVLHPYLMIKDHRTGVEVAGGNVQRVLEGGDLDLFVEAALAASAMGEEKEE 491
            +D E    +L+ L   +ED K W      E  Q L+ E   L+D V     +         +  +A++EG++    E    +  L+ + E L+ Q+ LLS   DG DC+LE+ AGAGG ES DW +ML +MY +WA   H   +E V E+ GE G G++S  +   GP AYGW KTEAGVHRLVRISPFD+  RRHT+FA V V+P                V ID KDLKIDTYRA GAGGQHVN T+SAVRITH+PT  VV CQ DRSQHRN+A A+D+LR RL     E+E Q++   ++ +     + GWG QIRSYVLHPY M+KD RT VE +  + Q VL+ GDLD F+EA+LA  A  +  EE
Sbjct:   23 LDWEPALLKLDELNSLIEDPKLWDDT---ERAQNLMRERTQLADAVDRQRAMEQRLQDAISLTEMAEEEGDDATVREIVADLEDLKAQIEKLQLQS-LLSGEADGNDCFLEVNAGAGGTESCDWAEMLLRMYLRWAE-QHGCKIEWVEESEGE-GAGIKSATIKIIGPNAYGWLKTEAGVHRLVRISPFDSQARRHTSFASVWVFPV---------IDDRIEVTIDEKDLKIDTYRASGAGGQHVNRTDSAVRITHMPTGIVVACQNDRSQHRNRAQAMDMLRARL----YERELQIRRAESDAIEATKTDIGWGHQIRSYVLHPYKMVKDLRTSVETS--DTQGVLD-GDLDRFLEASLALDAGSKRVEE 371          
BLAST of NO27G00070 vs. NCBI_GenBank
Match: XP_008604501.1 (peptide chain release factor 2 [Saprolegnia diclina VS20] >EQC41932.1 peptide chain release factor 2 [Saprolegnia diclina VS20])

HSP 1 Score: 288.9 bits (738), Expect = 3.200e-74
Identity = 160/302 (52.98%), Postives = 199/302 (65.89%), Query Frame = 0
Query:  188 LAKQEGEEEVREECEERMAGLEKECEALRTQALLLSSPLDGGDCYLEIQAGAGGRESGDWVQMLRKMYEKWAAGHHDLGVETVHETWGENGGGLRSVLLLFKGPLAYGWSKTEAGVHRLVRISPFDTAQRRHTTFAQVRVYP--ASLPSXXXXXXXXXXAVHIDPKDLKIDTYRAQGAGGQHVNTTESAVRITHIPTASVVTCQADRSQHRNKAMALDVLRGRLLTQQQEKEKQLKATYTEGLGENGWGSQIRSYVLHPYLMIKDHRTGVEVAGGNVQRVLEGGDLDLFVEAALAASAMGEE 488
            LA +E EE+V   C   +A      + LR + LL+S P D   C+LEI AGAGG ES DWV ML +MY +W         E V+   G+   G RSV L   G  AYGW++TEAGVHRLVRISPFD+A RRHT+FAQVRV+P  A++P            + ID KDL+IDTYRA G GGQHVN TESA+RITH+PT  VV CQ+DRSQHRNK  A+++LR RLL  +   ++  +  YT+GLG+NGWGSQIRSYVLHPY M+KDHRT   V+  N   VL+ GD+  F++ AL A+A   E
Sbjct:  106 LALEEHEEDVVAGCVASLATALASAKKLRAE-LLMSEPADPSSCFLEIHAGAGGTESCDWVDMLLRMYMRWGT-DQGFATELVNAVPGDE-AGYRSVCLRLDGSYAYGWTRTEAGVHRLVRISPFDSASRRHTSFAQVRVFPLAAAVPGARD--------IRIDTKDLRIDTYRASGPGGQHVNKTESAIRITHLPTNIVVQCQSDRSQHRNKDTAMEMLRARLLQLELIDQENERRKYTQGLGDNGWGSQIRSYVLHPYKMVKDHRT--NVSKSNTSAVLD-GDITTFIQEALLATAASVE 393          
BLAST of NO27G00070 vs. NCBI_GenBank
Match: SNB67249.1 (bacterial peptide chain release factor 2 (bRF-2) [Arboriscoccus pini])

HSP 1 Score: 288.9 bits (738), Expect = 3.200e-74
Identity = 174/370 (47.03%), Postives = 223/370 (60.27%), Query Frame = 0
Query:  125 DIEKKRRRLEVLTQTLEDEKSWTGEGGHEDMQPLITEAACLSDGVGLWDRLSLETAHIRDMAALAKQEGEEEVREECEERMAGLEKECEALRTQALLLSSPLDGGDCYLEIQAGAGGRESGDWVQMLRKMYEKWAAGHHDLGVETVHETWGENGGGLRSVLLLFKGPLAYGWSKTEAGVHRLVRISPFDTAQRRHTTFAQVRVYPASLPSXXXXXXXXXXAVHIDPKDLKIDTYRAQGAGGQHVNTTESAVRITHIPTASVVTCQADRSQHRNKAMALDVLRGRLLTQQQEKEKQLKATYTEGL----GENGWGSQIRSYVLHPYLMIKDHRTGVEVAGGNVQRVLEGGDLDLFVEAALAASAMGEEKEE 491
            D E    +L+ L   +ED K W      E  Q L+ E   L+D V     +         +  +A++EG++    E    +  L+ + E L+ Q+ LLS   DG DC+LE+ AGAGG ES DW +ML +MY +WA   H   +E V E+ GE G G++S  +   GP AYGW KTEAGVHRLVRISPFD+  RRHT+FA V V+P                V ID KDLKIDTYRA GAGGQHVN T+SAVRITH+PT  VV CQ DRSQHRN+A A+D+LR RL     E+E Q++   ++ +     + GWG QIRSYVLHPY M+KD RT VE +  + Q VL+ GDLD F+EA+LA  A  +  EE
Sbjct:   11 DWEPALLKLDELNSLIEDPKLWDDT---ERAQNLMRERTQLADAVDRQRAMEQRLQDAISLTEMAEEEGDDATVREIVADLEDLKAQIEKLQLQS-LLSGEADGNDCFLEVNAGAGGTESCDWAEMLLRMYLRWAE-QHGCKIEWVEESEGE-GAGIKSATIKIIGPNAYGWLKTEAGVHRLVRISPFDSQARRHTSFASVWVFPV---------IDDRIEVTIDEKDLKIDTYRASGAGGQHVNRTDSAVRITHMPTGIVVACQNDRSQHRNRAQAMDMLRARL----YERELQIRRAESDAIEATKTDIGWGHQIRSYVLHPYKMVKDLRTSVETS--DTQGVLD-GDLDRFLEASLALDAGSKRVEE 358          
BLAST of NO27G00070 vs. NCBI_GenBank
Match: XP_009842858.1 (peptide chain release factor 2 [Aphanomyces astaci] >ETV67601.1 peptide chain release factor 2 [Aphanomyces astaci])

HSP 1 Score: 287.3 bits (734), Expect = 9.200e-74
Identity = 158/302 (52.32%), Postives = 195/302 (64.57%), Query Frame = 0
Query:  183 RDMAALAKQEGEEEVREECEERMAGLEKECEALRTQALLLSSPLDGGDCYLEIQAGAGGRESGDWVQMLRKMYEKWAAGHHD-LGVETVHETWGENGGGLRSVLLLFKGPLAYGWSKTEAGVHRLVRISPFDTAQRRHTTFAQVRVYPASLPSXXXXXXXXXXAVHIDPKDLKIDTYRAQGAGGQHVNTTESAVRITHIPTASVVTCQADRSQHRNKAMALDVLRGRLLTQQQEKEKQLKATYTEGLGENGWGSQIRSYVLHPYLMIKDHRTGVEVAGGNVQRVLEGGDLDLFVEAALAASA 484
            +++  +A  E +  V ++C   +   E   + LR  ALLLS P D   C++EI AGAGG ESGDWV+ML +MY +WA  H D    E VH   GE   G RSV +   G  AYGW KTE GVHRLVRISPFD+  RRHT+FAQVRV+P +             A  I  K L+IDT+RA G GGQHVN TESA+RITH+PT  VV CQ+DRSQHRNK  A+D+LR RLL     ++   K  YT+GLG+N WGSQIRSYVLHPY M+KDHRT +  A  N + VL+ GD+  F++  L ASA
Sbjct:  117 KELFDMAMDENDVSVLDDCVATVDDAEVTAKNLRA-ALLLSEPTDPSSCFVEIHAGAGGTESGDWVEMLLRMYTRWAEAHPDGYRAEVVHAVLGEE-AGYRSVCVRIDGSYAYGWLKTEGGVHRLVRISPFDSQSRRHTSFAQVRVFPLA-----ARGDTKVVAPEISTKHLRIDTFRASGPGGQHVNKTESAIRITHLPTNIVVQCQSDRSQHRNKDTAMDMLRARLLQLALLEQDVEKKKYTQGLGDNAWGSQIRSYVLHPYKMVKDHRTNMTCA--NAKGVLD-GDISPFIQQVLVASA 408          
The following BLAST results are available for this feature:
BLAST of NO27G00070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
AMK98484.13.800e-10457.22mitochondrial peptide chain release factor 2 [Mono... [more]
AMK98480.13.100e-9052.16mitochondrial peptide chain release factor 2 [Visc... [more]
GAY05796.11.100e-7954.13peptide chain release factor 2 [Pythium insidiosum... [more]
GAY04481.11.600e-7854.28peptide chain release factor 2 [Pythium insidiosum... [more]
XP_008862121.13.100e-7752.98peptide chain release factor 2 [Aphanomyces invada... [more]
XP_012196934.11.700e-7549.70peptide chain release factor 2 [Saprolegnia parasi... [more]
WP_106408566.11.900e-7446.90peptide chain release factor 2 [Arboriscoccus pini... [more]
XP_008604501.13.200e-7452.98peptide chain release factor 2 [Saprolegnia diclin... [more]
SNB67249.13.200e-7447.03bacterial peptide chain release factor 2 (bRF-2) [... [more]
XP_009842858.19.200e-7452.32peptide chain release factor 2 [Aphanomyces astaci... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR063ncniR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR116ngnoR116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G00070.1NO27G00070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|608781gene_10114Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G00070.1NO27G00070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G00070 ID=NO27G00070|Name=NO27G00070|organism=Nannochloropsis oceanica|type=gene|length=3053bp
ATGAGAGGATCACGAGCGGTAACGACAACGCCAGCAAAGGTCCTGCGGCG
CCGCCTCCTCGCACCATCTTCATCATCAGCTTTTCCTTCTGCTCCTCCCC
CACCACGCCTCCCAGCCCCCTCCCTCCCCAGCCACTCCTACACCGAGTAC
TACCGCCGCGCTCTTGTCTCCTCCTCTGCCAGGGACATCCACTTTTCAGC
CCAGCCACTTAGCACTAGCGCCCTCCCTCCCACCCCGCCCGAGCCGGCCT
TGTCTCGACCTCCCCCCTCCTCCTCTACCCCACGCTCCACCTCGTCGTCC
TTCTCCTCATCCTCGATTGACGCAGCTGCCGAACGAATCGAAAGTACCCT
GGCAATCATTTCTCAAAAGATGGACATCGAGAAGAAGAGGAGGAGACTAG
AAGTTCTGACACAGACATTGGAGGACGAAAAGAGCTGGACGGGAGAAGGA
GGCCACGAGgtacgcaccgaggaaaggagagggttgataaaatggaagtg
tggtgaagacttgtcgaaacgtaagatatgagaaagcatgataagacgcg
taacagaagaggaatgcccccttggaggatttttgggaagattaggtcca
atatcctcatataccccgtacctccctcctcccctccgtccacctccctc
cccacacgccacaccacagGACATGCAGCCTTTAATTACTGAAGCTGCCT
GCCTTTCCGACGGTGTGGGACTGTGGGACCGTCTCTCTCTAGAAACCGCG
CACATAAGGGATATGGCTGCCCTGGCTAAGCAGGAGGGGGAGGAGGAAGT
GAGGGAGGAATGTGAAGAGAGGATGGCAGGGCTGGAGAAAGAGTGCGAGG
CGTTGAGAACGCAGgtaggttgggaggtagagaggcagggaagtagggag
acatggaggaagggaggtagggagggaagcaagagtgagagaggaaagat
tagatagttagaaggattgaaagaaaggtcgatcgaaaagcggcagtaga
acgaaatgcatccgtccccttcactcccaaatatctccttccctcctctc
cctcctcccccagGCCCTCCTCCTCTCCTCGCCCCTCGACGGTGGCGACT
GCTACCTCGAGATCCAGGCAGGCGCCGGGGGGCGGGAGAGCGGGGACTGG
GTCCAGATGCTGCGGAAGATGTACGAGAAATGGGCCGCGGGGCACCACGA
CTTGGGCGTGGAGACAGgtccgttcgtccctccctccctccctcccttct
tccctccctgccctcccttcgctccctactcgtcctgcctcccgctttcc
ccctcagccgttcctccacgagacctcatttgtgaaattcatttcgtcat
ggctctccctctccgcccgccctccccccctccctccctccctccccatc
cctttccctccctccccatccctttccctccctccccatccatttcaaca
gTGCACGAAACCTGGGGTGAGAACGGAGGGGGGCTTCGATCCGTCCTTCT
CCTCTTCAAGGGCCCGCTGGCCTACGGGTGGAGCAAGACGGAGGCGGGCG
TGCACCGACTGGTGCGGATCTCGCCCTTTGACACCGCCCAGCGACGACAC
ACCACATTCGCGCAGgtgcggtacaggctccttccctttccttccctttt
tccccggtggagggtggctgcgagtgcggatggaggaggaggaagcaaag
aaaaggaggggatggatgaaactcgctgcttacctccctcctgccccccc
cacctgctactgctgctgctgcagtttcttattctgcccctgcgtcttct
tttttctccttcattctcccttctctccttttactctctcttccacccct
ccttccctcccgccctcactttcctcccttcactccccagGTCCGAGTTT
ACCCCGCCTCCCTTCCCTCCTCCTCCTCCTCCTCCTCCTCGTCGTCTCCA
GCCGTCCACATCGATCCCAAAGACCTAAAGATCGACACCTACAGgtactt
gtcctccttcctcccctccctccctccatccttgtcccctctctgctttc
ttcttccttccttacgtggtcatcttcactcgcccttcccccttctcccc
ctcccctcctccccccctcgggacctccttctccaaagAGCGCAAGGTGC
GGGTGGACAGCACGTGAACACGACCGAGAGCGCCGTCCGCATTACCCACA
TCCCTACGGCCTCGGTCGTAACCTGCCAGgtacgtcccctccctcccgcc
ctccctccctccctcccgccctccctccccaccgcccgccccctctctcc
ctcgtgcagattcatgttcgtctctgccgaggagcggatctgtcatcctc
ttttccccctttctcctgctcctcttcctccctctccaaaccagGCCGAC
CGCTCTCAACACCGGAATAAGGCCATGGCACTCGACGTTCTCCGAGGAAG
GCTTCTGACCCAGCAACAAGAGAAGGAGAAACAGCTTAAGGCCACCTACA
CCGAGgtgcgagattcctctccgccattcgcagcctttcttctccctccc
tcttccctctctccctcttcctcccaagcttctaacccgcccattcactc
acccctctttcccttcctccctccttccctccttcaacccttaccacccc
cacagGGCCTGGGCGAGAATGGGTGGGGCAGCCAAATCCGTTCGTATGTC
CTTCATCCCTATTTGATGATTAAGGACCACAGgtaggagagggagggagg
ggcggggggggagtcgggaggagggacccctcattgtcctcgctgctgca
tcatagttgttcccgcatgttcactttttcttgtacgcactcccatagGA
CGGGCGTCGAAGTGGCCGGGGGAAACGTGCAGCGGGTGCTAGAAGGCGGA
GATTTGGACCTATTTGTCGAGGCAGCCCTCGCAGCCTCGGCGATGGGGGA
AGAAAAGGAGGAGGTGGGAGGGGAAGAAGAAGGGAAGGTGGGCGAACGGG
AGCAGCAGAAGCAAAAGTATAAGCAACAGCAGAGGCAGCAGTCGAAAGGC
TAG
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protein sequence of NO27G00070.1

>NO27G00070.1-protein ID=NO27G00070.1-protein|Name=NO27G00070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=520bp
MRGSRAVTTTPAKVLRRRLLAPSSSSAFPSAPPPPRLPAPSLPSHSYTEY
YRRALVSSSARDIHFSAQPLSTSALPPTPPEPALSRPPPSSSTPRSTSSS
FSSSSIDAAAERIESTLAIISQKMDIEKKRRRLEVLTQTLEDEKSWTGEG
GHEDMQPLITEAACLSDGVGLWDRLSLETAHIRDMAALAKQEGEEEVREE
CEERMAGLEKECEALRTQALLLSSPLDGGDCYLEIQAGAGGRESGDWVQM
LRKMYEKWAAGHHDLGVETVHETWGENGGGLRSVLLLFKGPLAYGWSKTE
AGVHRLVRISPFDTAQRRHTTFAQVRVYPASLPSSSSSSSSSSPAVHIDP
KDLKIDTYRAQGAGGQHVNTTESAVRITHIPTASVVTCQADRSQHRNKAM
ALDVLRGRLLTQQQEKEKQLKATYTEGLGENGWGSQIRSYVLHPYLMIKD
HRTGVEVAGGNVQRVLEGGDLDLFVEAALAASAMGEEKEEVGGEEEGKVG
EREQQKQKYKQQQRQQSKG*
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Synonyms
Publications