NO27G00020, NO27G00020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00020 vs. NCBI_GenBank
Match: EWM22011.1 (ankyrin repeat domain protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 120.2 bits (300), Expect = 2.000e-23 Identity = 97/280 (34.64%), Postives = 133/280 (47.50%), Query Frame = 0 Query: 65 PFHHHA---EPASVPVVANMHPAMAPEALLDAVNEGSAAQVHAILARDPSLANHRDGFGQTPLMWAAYKGRVEMVSCLLDCGARIDECETRRARTALYLACEFDHAPVVAMLLARGANPTLAAQRGWTVLSRGYDGWTPLIIAGYNGCPAVLRCLL--APSSSSSHPSSHPLLEGRDERGATALWWA--------------AVHNRPEAVRVLLEAGADFLQANDEDKTALDMARERSNTDCAMLLENAERIYLMCRARKVQRETQAW--VSVLEEAMMG 324 PF HH + A A E +++A EG + +L +DPSLA RD GQ+PLMWAAYKG E+ S L+ GA +D+ + + +R+ALY+ACEF + V A+LL GA+P+ Q G T L IA YN V++ +L A SS + D G+TAL A AV + E VR+LL+ GAD L + L A + C LL N ER L+ +AR RE + + E AM+G Sbjct: 40 PFRHHTVHRTGTNEYAQAMEDRAAMAEQMIEASKEGHVSMADGLLRQDPSLALCRDSVGQSPLMWAAYKGHAELASLLIKAGAPLDDHDCQSSRSALYMACEFGNWAVAALLLQHGADPSFRRQ---------LYGRTCLQIAAYNNHAHVVQGVLHFAAFSSRGPGPCRVDINAVDNHGSTALHLAIRDDHLHPPFQATSAVLDISETVRILLQWGADPLLPDHTGGLPLAAAHRLGHKRCIALLANWERAALVHKARWCLREARLLEVEARAESAMLG 310
BLAST of NO27G00020 vs. NCBI_GenBank
Match: XP_005854832.1 (hypothetical protein NGA_0418200 [Nannochloropsis gaditana CCMP526] >EKU21525.1 hypothetical protein NGA_0418200 [Nannochloropsis gaditana CCMP526] >EWM20409.1 hypothetical protein Naga_101237g2 [Nannochloropsis gaditana]) HSP 1 Score: 112.8 bits (281), Expect = 3.100e-21 Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = 0 Query: 278 MARERSNTDCAMLLENAERIYLMCRARKVQRETQAWVSVLEEAMMGMPAWLAGRVRAGRDKLPLALAQPQLDREIAETQDGKQDGKEGGSGQG---RLLEITTPISSFTDA 386 MARER+N +C LLE AE+ YLM RAR++ RE +AW VLE+ + GMP WL RVR +++ P +P LD E+ ET+DGKQD KE G G G E+ +P+ SF+DA Sbjct: 1 MARERNNPECVALLEMAEKAYLMRRARRLLREGEAWAHVLEDTLRGMPRWLTERVRGAKERWPYMQPEPDLDEEVVETEDGKQDLKEEGGGTGWESEACELRSPLYSFSDA 111
BLAST of NO27G00020 vs. NCBI_GenBank
Match: EWM24172.1 (ankyrin unc44 [Nannochloropsis gaditana]) HSP 1 Score: 85.5 bits (210), Expect = 5.400e-13 Identity = 77/278 (27.70%), Postives = 117/278 (42.09%), Query Frame = 0 Query: 84 AMAPEALLDAVNEGSAAQVHAILARDPSLANHRDGFGQTPLMWAAYKGRVEMVSCLLDCGARIDECETRRARTALYLACEFDHAPVVAMLLARGANPTLAAQRGWTVLSRGYDGWTPLIIAGYNGCPAVLRCLLAPSSSSSHPSSHPLLEGRDERGATALWWAAVHNRPEAVRVLLEAGADFLQANDEDKTALDMARERSNTDCAMLLENAERIYLMCRARKVQRETQAWVSVLEEAMMGMPAWLAGRVRAGRDKLPLALAQPQLDREIAETQDGKQD 362 A P+ +L G + A++ DPS AN++ TPLMWA+Y G +VS LL+CGA ID+ L + GW PL +A G V+R LLA + ++ RD+ G+TAL+ AA+ A+R LL+ G + + +AR R +C +LE ER++ + +AR ++R +A V V EE G GR A P +D +A ++G+ D Sbjct: 21 AHGPDTILYYARAGDLDGMMAMVQEDPSQANYQRIV--TPLMWASYCGHAHIVSFLLECGAHIDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKRK----------GGWCPLSVAASEGHVGVVRVLLA--------NPRVDVDSRDDDGSTALYRAALWGCAGAIRALLKKGGNPRIPGGGGLLPVGVARARGYQECVDVLEGEERVFGLAKARALRR-VRARV-VCEEGRRG-----GGRAGXXXXXXXXXXANPTVDGPVAMLEEGEAD 271
BLAST of NO27G00020 vs. NCBI_GenBank
Match: XP_023670833.1 (inversin [Paramormyrops kingsleyae]) HSP 1 Score: 83.6 bits (205), Expect = 2.000e-12 Identity = 63/210 (30.00%), Postives = 102/210 (48.57%), Query Frame = 0 Query: 70 AEPASVPVVANMHPAMAPEALLDAVNEGSAAQVHAILARDPSLANHRDGFGQTPLMWAAYKGRVEMVSCLLDCGARIDECETRRARTALYLACEFDHAPVVAMLLARGANPTLAAQRGWTVLSRGYDGWTPLIIAGYNGCPAVLRCLLAPSSSSSHPSSHPLLEGRDERGATALWWAAVHNRPEAVRVLLEAGADFLQANDEDKTALDMA 280 A P + P+ + +H A AVN G +H ++ DP+L + D FG+TPLM+ R++ LL GA ++ + R RTAL+LA + + + +LLAR A+ W L + + TPL +A + P L LL + ++ +D+ TAL W+A +N PE VR+L++ ++ + E K L A Sbjct: 13 AAPGAAPLGSQVHAA--------AVN-GDRGTLHKLITADPTLRDREDAFGRTPLMYCVLADRLDCAEVLLKAGASANKAD-RSKRTALHLAAQKGNVRFMKLLLARRAD--------W--LQKDLEDMTPLHLATRHHTPKCLAQLLKHMAPGE-------VDTQDKNKQTALHWSAFYNHPEHVRLLIKHDSNIGIPDSEGKIPLHWA 195
BLAST of NO27G00020 vs. NCBI_GenBank
Match: XP_010195233.1 (PREDICTED: ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1, partial [Colius striatus]) HSP 1 Score: 81.6 bits (200), Expect = 7.800e-12 Identity = 66/209 (31.58%), Postives = 97/209 (46.41%), Query Frame = 0 Query: 88 EALLDAVNEGSAAQVHAILARDPSLANHRDGFGQTPLMWAAYKGRVEMVSCLLDCGARIDECETRRARTALYLAC-----EFDHAPVVAMLLARGANPTLAAQRGWTVLSRGYDGWTPLIIAGYNGCPAVLRCLLAPSSSSSHPSSHPLLEGRDERGATALWWAAVHNRPEAVRVLLEAGADFLQANDEDKTALDMARERSNTDCAMLL 292 E L A+ G + + +L S+ + R FG TPLM AA +V LLD GA + C + T L AC E + V +LL+R A+P L +R TPLI A G P V+ L+A S ++ +D+ G +AL WAA H + LLE GAD ++KTA ++A+ ++++ LL Sbjct: 12 EVLKKALFRGDVSLIEELLNSGVSIES-RFQFGWTPLMCAASVAHFAVVGLLLDRGA--NACFEKDKYTVLMAACAARASEENVLKTVELLLSRNADPNLTCRR----------QMTPLIYAASKGYPEVVALLVAHGSH---------IDAQDDNGYSALMWAAQHGHKSVILKLLELGADKNLQTKDEKTAAELAKANNHSEIHSLL 198
BLAST of NO27G00020 vs. NCBI_GenBank
Match: XP_007556277.1 (PREDICTED: inversin isoform X1 [Poecilia formosa] >XP_016528936.1 PREDICTED: inversin isoform X1 [Poecilia formosa]) HSP 1 Score: 81.3 bits (199), Expect = 1.000e-11 Identity = 59/187 (31.55%), Postives = 93/187 (49.73%), Query Frame = 0 Query: 93 AVNEGSAAQVHAILARDPSLANHRDGFGQTPLMWAAYKGRVEMVSCLLDCGARIDECETRRARTALYLACEFDHAPVVAMLLARGANPTLAAQRGWTVLSRGYDGWTPLIIAGYNGCPAVLRCLLAPSSSSSHPSSHPLLEGRDERGATALWWAAVHNRPEAVRVLLEAGADFLQANDEDKTALDMA 280 AVN +A V I A +P L +H D FG+TPLM+ R++ LL GA +++ + R+AL+LA + + + +LL+R AN L + +G TPL +A + P L LL ++ +D+ TAL W+A +NRPE VR+L++ ++ + E K L A Sbjct: 21 AVNGDRSALVKLITA-EPQLRDHEDQFGRTPLMYCVLADRLDCAEVLLKSGASVNKTD-HSQRSALHLAAQKGNVRFLKLLLSRRAN----------CLQKDLEGMTPLHLATRHPSPKALALLLKHIGPGE-------VDTQDKNKQTALHWSAFYNRPEHVRLLIKHDSNIGIPDSEGKIPLHWA 188
BLAST of NO27G00020 vs. NCBI_GenBank
Match: XP_014885347.1 (PREDICTED: inversin isoform X1 [Poecilia latipinna] >XP_014885356.1 PREDICTED: inversin isoform X1 [Poecilia latipinna]) HSP 1 Score: 81.3 bits (199), Expect = 1.000e-11 Identity = 59/187 (31.55%), Postives = 93/187 (49.73%), Query Frame = 0 Query: 93 AVNEGSAAQVHAILARDPSLANHRDGFGQTPLMWAAYKGRVEMVSCLLDCGARIDECETRRARTALYLACEFDHAPVVAMLLARGANPTLAAQRGWTVLSRGYDGWTPLIIAGYNGCPAVLRCLLAPSSSSSHPSSHPLLEGRDERGATALWWAAVHNRPEAVRVLLEAGADFLQANDEDKTALDMA 280 AVN +A V I A +P L +H D FG+TPLM+ R++ LL GA +++ + R+AL+LA + + + +LL+R AN L + +G TPL +A + P L LL ++ +D+ TAL W+A +NRPE VR+L++ ++ + E K L A Sbjct: 21 AVNGDRSALVKLITA-EPQLRDHEDQFGRTPLMYCVLADRLDCAEVLLKSGASVNKTD-HSQRSALHLAAQKGNVRFLKLLLSRRAN----------CLQKDLEGMTPLHLATRHPSPKALALLLKHIGPGE-------VDTQDKNKQTALHWSAFYNRPEHVRLLIKHDSNIGIPDSEGKIPLHWA 188
BLAST of NO27G00020 vs. NCBI_GenBank
Match: XP_014885364.1 (PREDICTED: inversin isoform X2 [Poecilia latipinna]) HSP 1 Score: 81.3 bits (199), Expect = 1.000e-11 Identity = 59/187 (31.55%), Postives = 93/187 (49.73%), Query Frame = 0 Query: 93 AVNEGSAAQVHAILARDPSLANHRDGFGQTPLMWAAYKGRVEMVSCLLDCGARIDECETRRARTALYLACEFDHAPVVAMLLARGANPTLAAQRGWTVLSRGYDGWTPLIIAGYNGCPAVLRCLLAPSSSSSHPSSHPLLEGRDERGATALWWAAVHNRPEAVRVLLEAGADFLQANDEDKTALDMA 280 AVN +A V I A +P L +H D FG+TPLM+ R++ LL GA +++ + R+AL+LA + + + +LL+R AN L + +G TPL +A + P L LL ++ +D+ TAL W+A +NRPE VR+L++ ++ + E K L A Sbjct: 21 AVNGDRSALVKLITA-EPQLRDHEDQFGRTPLMYCVLADRLDCAEVLLKSGASVNKTD-HSQRSALHLAAQKGNVRFLKLLLSRRAN----------CLQKDLEGMTPLHLATRHPSPKALALLLKHIGPGE-------VDTQDKNKQTALHWSAFYNRPEHVRLLIKHDSNIGIPDSEGKIPLHWA 188
BLAST of NO27G00020 vs. NCBI_GenBank
Match: XP_014885373.1 (PREDICTED: inversin isoform X3 [Poecilia latipinna]) HSP 1 Score: 81.3 bits (199), Expect = 1.000e-11 Identity = 59/187 (31.55%), Postives = 93/187 (49.73%), Query Frame = 0 Query: 93 AVNEGSAAQVHAILARDPSLANHRDGFGQTPLMWAAYKGRVEMVSCLLDCGARIDECETRRARTALYLACEFDHAPVVAMLLARGANPTLAAQRGWTVLSRGYDGWTPLIIAGYNGCPAVLRCLLAPSSSSSHPSSHPLLEGRDERGATALWWAAVHNRPEAVRVLLEAGADFLQANDEDKTALDMA 280 AVN +A V I A +P L +H D FG+TPLM+ R++ LL GA +++ + R+AL+LA + + + +LL+R AN L + +G TPL +A + P L LL ++ +D+ TAL W+A +NRPE VR+L++ ++ + E K L A Sbjct: 21 AVNGDRSALVKLITA-EPQLRDHEDQFGRTPLMYCVLADRLDCAEVLLKSGASVNKTD-HSQRSALHLAAQKGNVRFLKLLLSRRAN----------CLQKDLEGMTPLHLATRHPSPKALALLLKHIGPGE-------VDTQDKNKQTALHWSAFYNRPEHVRLLIKHDSNIGIPDSEGKIPLHWA 188
BLAST of NO27G00020 vs. NCBI_GenBank
Match: XP_014851526.1 (PREDICTED: inversin isoform X1 [Poecilia mexicana] >XP_014851527.1 PREDICTED: inversin isoform X1 [Poecilia mexicana]) HSP 1 Score: 81.3 bits (199), Expect = 1.000e-11 Identity = 59/187 (31.55%), Postives = 93/187 (49.73%), Query Frame = 0 Query: 93 AVNEGSAAQVHAILARDPSLANHRDGFGQTPLMWAAYKGRVEMVSCLLDCGARIDECETRRARTALYLACEFDHAPVVAMLLARGANPTLAAQRGWTVLSRGYDGWTPLIIAGYNGCPAVLRCLLAPSSSSSHPSSHPLLEGRDERGATALWWAAVHNRPEAVRVLLEAGADFLQANDEDKTALDMA 280 AVN +A V I A +P L +H D FG+TPLM+ R++ LL GA +++ + R+AL+LA + + + +LL+R AN L + +G TPL +A + P L LL ++ +D+ TAL W+A +NRPE VR+L++ ++ + E K L A Sbjct: 21 AVNGDRSALVKLITA-EPQLRDHEDQFGRTPLMYCVLADRLDCAEVLLKSGASVNKTD-HSQRSALHLAAQKGNVRFLKLLLSRRAN----------CLQKDLEGMTPLHLATRHPSPKALALLLKHIGPGE-------VDTQDKNKQTALHWSAFYNRPEHVRLLIKHDSNIGIPDSEGKIPLHWA 188 The following BLAST results are available for this feature:
BLAST of NO27G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00020 ID=NO27G00020|Name=NO27G00020|organism=Nannochloropsis oceanica|type=gene|length=3116bpback to top protein sequence of NO27G00020.1 >NO27G00020.1-protein ID=NO27G00020.1-protein|Name=NO27G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=527bpback to top Synonyms
Publications
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