NO26G01700, NO26G01700 (gene) Nannochloropsis oceanica

Overview
NameNO26G01700
Unique NameNO26G01700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3720
Alignment locationchr26:562672..566391 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:562672..566391 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO26G01700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01700.1NO26G01700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|182275gene_8007Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01700.1NO26G01700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01700 ID=NO26G01700|Name=NO26G01700|organism=Nannochloropsis oceanica|type=gene|length=3720bp
AAAGAAGGAACTTTTTTTCTTCCGTGGCCTATACGTATTCGCTACGTTCG
TCTTTTACGACCGGTAGTGCTCCGCTTACGCTCACAAGACTTTCCAGTGT
TTTTGCAGTGGGTAGCGTCCACAATTTTGCGTCCGCCTGTGACCATCCAG
AGTTAGTTGTATAGCCCGCGCATCATATTCTGGAGGGAATGACCACCGCA
TCACCCTCGTGAGTCGATTACAAGGAACAAGGTTCTCTCTTCTGAAGCGT
CCGGCAGCCACTCTTTCAAATTCTATCCTGACACAACCCTACAAACCACC
TATTTGACAGGTTCATCGTTGGTGGACAAGCTAAAGCCATGACATACCTG
AAGATTTCCTCCCGAAACTGAACATGTAGCTCATGATTATCAAGATGGGA
AGGCCCGATTTTTTGTCACATCGTTCATTTTCCAGCCCTCCCCTTCCCGC
ACAGGCGGCCTTTGTCGTTCCTTTTGCATGGCGCCCTGACAGGCCCACAA
TGGTAGCAGTGGAGGGGATGGGGTCAGGTTACCGGAAGTCCTCGGTAAAG
CCGCTGCTTAGGTGAAACTTTTTTCAAGGCTGGACTGAAAAGCTCCCTCT
CCCCCTCTGGGTGAGCTGCTTTGAGTCTCAAAAAATGAAATTACGACAGG
GAAAAAAATTGGATGAGGACAATGTGGATGCGCCCGAGAGGGATACCCCC
AGGGGGAATGGTCCCCGGACATGGGCAATACGACGACGGGAGAAGACGAC
GCCCCACGCTTTTACATGCCAAGCCTGCCGGGACTCGAAGgtgagaggtg
ggtcgaggagttctactccagggattaggaagttgcccgaaagacaggag
gagtcattcatgcacaccttccccttgtgcatacccatctgtacgccccc
atccctcttccccgcttgaacaaacatagGTCAAATGCTCTGGCGGTTTC
CCCTGGTAGGTGAATTGAGTCATCTGATGACGTGGAAGAAGAGCCGGAAA
GGGGTTGAGTAGTGTTCAACGGCGAGGTGTGATGGATTATGCTTCGTCGT
CTAGGAAGGTGATCCGCTCACTGGTTGATTTTCACACTCTGTTTTGTTTT
TTCACCTTTTCTTCTTATCTCTTTCCTTCCTCCACACTGCTTGTGCTACC
TTATCCACCTTACCGTCGTCGTCGTCTCCGTTGTCGTCCCTTTTTCCCCA
TCGTCACCGCGTCTCCCACGATCGTCCAGTCGACGgtagggggaagggag
ggagggaggggagagatgggaggtaagaattgaccggaatgaaaatgaaa
tggtgttcagatggtgtagtatcaacgaggcgtagaatgaatgttaacca
acgactagatgcaaggggaaaatcgataaggtgcggggaggaatcaatgc
cttccggaagatatgcgactacacattctcactatcatctcctttgattt
aaaaactaaattaatggtgcagtcgatctttatcttatttaaatttacat
ttaatttatgtgttgatttttactacaatgacctcagcataatattggac
ctcagacgattacaaaataattaaaatactaaaagaataaaataataata
tttagattaacaaagttatggtataacaacaaatatatgtacaacaattt
atttacatcaataaatacattaaattaaaagagattacatgagagaataa
tgatcagcgtatgaatgaggaaaacgatgtggcctgaagaagctcacatg
aaaggtcggagcacgccctttacgaatgagagaaaacgattccaattaag
aaaaatgatgaagctcaaattataatgcccagtaaatctagttaggataa
agatcaaattataataaatagcaggctcagtataaatttacctcccaacc
cttcttgccccttcctccttccattcctcactccttccttcttcagGTGC
TTCCGCAACTGCCTCAAGTGTCAGATCCAGAATGTAGCCGATGTGCGCAA
GCCAACCCGTCCTCCCTCCATCCCTCCTTCCCTCTCTCCCTCCGCCGTGC
CGATGGGAGCCCAAATGGCTTGCGAGCCAGGGAAGgtattggcaaggggg
tggtggggagggagggaaggagggagggaaggagggcgatgtataattgt
aaaggcaccttcaccctctctattatcactcactcacttattcttttttt
cattttttaaattatcctcatgattcatgttttatttggggcctcagCCG
CCGGGCTCTAGTCACAAGAAGGAGTATGGAGGAGGGGATGGAGAGGAAGA
GCTGAAAGGAGGAGGTGATGATGGTTGTGGTGGTGGTGGTGGAGGAGGAG
GAGGTGGTGGTGGTGGAGGAGGAGGAGAAGAAGGAGGAGGAGGAGAAGAC
AGGGGGAATGAGAGAGTGAAGGAGGAGGAGGAGGCGGAGGAGTACGACGA
GGAGGAGAGAGGGGAGGGGCGAGGCGCTCCTTACGTTGACCTTGTCTTTC
ACCGACATGAGCCTCAGGCAGCCGTTACTTTATTGCTGGATGCCGTCGTG
GTGGCCCAAAAGGAAGGGAGGATCGACAGAGAGAGGGTGCGGCGTGTGCT
gtgagtagggagtgagggagggaggaagtgaggggggaaggagggaggga
gggagcgagggaaaaggaggggagaattatagagagagggtgcggcgatg
accatgaggagggaggaagggagggacggagggaggaggaagaaggaggg
gacagagaagagtgagcatccggccttcacactcatcattcttgaaacac
acactctggccttcatttgataacgcagcgcccctccctcctcccccttt
cctccccctccaactccaagccctaaagtagagcgcgaagctcacccctc
cctccctcccccctcctcccctcctttcctttcagCCAAGGGTGGCAAAT
ACAATCACTTCTCGCGGAGCAGGATATCTCTTGGGGCAGTAGTCAGGCCA
TCCAAAGTATCACAGGCCTGGACGCTGACGAGgtacgccctccctccctc
cctccctccatctctctttccttgtccatggcaccacacacatgcaccca
tttcctccctccctccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctcctccccttcttcagGTGGAAGGAGGTAAA
TTGCTTCCTTTGTCGGCACCCTCACCCGTCCGgtaggtaggaaggagtga
gaaaggagggagaacgaggagggaagcttaggaaaagattgagaagatga
cttatacatgttgaccatactctcgctcccctcctccctccctccttccc
tccctcccgtcctccctcgctccttcatgcagGCTTGCTCGGCTTGCCCG
CCACGAGAGCCCTCCCTCCCTCCCTCCCTCCCGCCCTCCCTCCCCCCTCC
CTCCCGCCCTCCCTCCCTCCCTCCCGTCGACCCATTCATCCTCCCTTGTT
ATCGCCTCCTCGATGATGGTCGAAGCCCGCTGGCCTTTCACGCCTTTCCA
GGAGGTGGCAGgtacgtaccctcccccctcccgccctccctccctccctc
cctccattcctccctctttccctctaatgcttttcgggacctcttgaata
atttatgtatctcctcctttcccccctccctccctccctccctccctccc
tagAGAGCCTCTGTCTATGA
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protein sequence of NO26G01700.1

>NO26G01700.1-protein ID=NO26G01700.1-protein|Name=NO26G01700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=242bp
MGAQMACEPGKPPGSSHKKEYGGGDGEEELKGGGDDGCGGGGGGGGGGGG
GGGGEEGGGGEDRGNERVKEEEEAEEYDEEERGEGRGAPYVDLVFHRHEP
QAAVTLLLDAVVVAQKEGRIDRERVRRVLQGWQIQSLLAEQDISWGSSQA
IQSITGLDADEVEGGKLLPLSAPSPVRLARLARHESPPSLPPSRPPSPLP
PALPPSLPSTHSSSLVIASSMMVEARWPFTPFQEVAESLCL*
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Synonyms
Publications