NO26G01690, NO26G01690 (gene) Nannochloropsis oceanica

Overview
NameNO26G01690
Unique NameNO26G01690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2471
Alignment locationchr26:560160..562630 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:560160..562630 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO26G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01690.1NO26G01690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01690.1NO26G01690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01690 ID=NO26G01690|Name=NO26G01690|organism=Nannochloropsis oceanica|type=gene|length=2471bp
ATGCGAGCGAACGTCCGCCGTTACAAAACGGCTCAGCTGCTGTTGAGTGC
GGCgtgagtagggagggagggaggagggagggagggagaagggacacggt
agagcaagcatgcgtttcatccatgttgccaaatgtttcatcccctccct
ccctctccctccctccctccctccctccctccctccttccctccctccct
ccctccctccctccctccctccctccctccctccctccctcccttcctcc
cttgctcagCCTGGTCGCCCCTGAGGACCGCTCTGTCTACTTCCATGACG
TCGTTCGCGGACTTTTTACCACCGCCACCACGAAGCACACGAGCATCATC
AAGgtactccctccctccctccctccctccctccctccctccctccctcc
ctcccttccttccttccttcctccctccctgcggccagtgcctccttgat
tcctgatttctaacttccttccacactttccctccctccctccctccctc
cctccctcccccttcttcttctacagTGCGTTGACCGCCGCGGTAACATC
AGgtaagccacctaacatttctaccctccctccctccctccccccctccc
tccctcatcgagtccatcacttcagccatcacatcatccatcctcctcac
acaccatcctgcatcttccttcctttcccctatccctccctccctccctc
cctccctccctccctccctccctccctcagACTCTACATTCTTGAGCACC
ATCCCCTCACGCACGAAGGCCTCCCTTCCCTCCTCCTCCGCATCGAGCGA
GTCTCTCCCACACGACATTTTACCGACAGACCCGTCGAGgtatgtagccc
cagctcgtacctccctcccctccctcctcccctccctccttccctccccc
cctccctcctcctccgcgcgagtctcgcccacacgacatttcacccatcg
aggtacgtgacctccctccctccctccctccctccctccctctttccctc
ctttcttctccccctctttcctcccctccctccctccctcctccccttcc
ttccctccctccctccctccttccctccattcctccctccctcccttcct
ccctcctccccttccttccttccctccctccctcctccccttccttccct
ccctccctccctccctccctccctctctccctccctccctcccagggatt
gatttggaaggcatccattcgcgtccttccctccctttcttccttccctt
cctccttctctccctccctctctcttctctcctcctcaaatatgatactg
agcagttccactccctccctccttccctcccccccttccttcctagCTGA
ACGAACGCACGCTGAAGAAGCGACGACGTCGGCCTTTATGGCTTATATCT
CGGCGAAGGAAAGGAGGGACAGGGTGGGGGGAGGTGGAGGGAGGGTGGGA
GGGTGAGGGGGAGGGGAAGGAGGAGGAAATGAGGAGAAGGAGGGAGGAGG
AGGAGGAGGAAGAGGAAAGGAGGGGGAGGGACAAGGAGGAGCGAGGAGAG
GGAGGGCGGAAGGGGGAGGACGAGGGGAAGAGGGAGGAGGAGGAGGAGGA
AGAAGgtacgctcttcaagacgtctgtctctgtcaggaaaccttattctg
aaaatcttgttgtggcctccctccctccttccctccctcctccctccttt
cttcatccaccttccctcccttcctcccttcctccctccctctctttctc
ctccctcctttcttcatccaccttccctcccttcctcccttcctccctcc
ctccctccctacagTGTTCCGCTTTCCCGGCATCGCCTGCGTCCCGTCCT
CCCCTTCCCTCGGATTAGTATCTTCCGCACAACTACTTTTGACCCTCGGC
CAAACCGACATCTCAGgtagacaagccctccctcccttcctccctccttt
ccttgttggaaggtattcctgtcctctctattcatccttcctcctcctcc
tccctttctccctttctcccgccctgctgcgtctccctccctcccgccct
gctgcgtctccctccctccctccctccctccctccctccctccctccctc
cctccctccctccagACGGCGGTGTCTTAATCTTCGGTGATGGAAGCCGA
CATCCCATTGTCTCTGCCCGAGGAAGGGCACGAGGACGGGAGGGAGGAAG
GGCAAAGAGTCGGCCATCACCACTGGCAGTACGAGAAACATCAGCAGCAG
AGGCAGCAGCAGCAGTAGTACGAGAAACATCAGCAACAGCAGCTCAAGCC
GACGACTGTAATTTCGACCGACAAACGAACGATCCTCCTCCGTTTCCCTC
CCTCCTTCCCTCCCTATCTTCCTCCCACCTCTACTCACTCTCCTCTCTCG
CCACGGCGGCTGCCTCTGCTGCGCGTAGCTTATCCACCGGCCGAGAAGAG
GAGAACGATGGCCTTATCTGA
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protein sequence of NO26G01690.1

>NO26G01690.1-protein ID=NO26G01690.1-protein|Name=NO26G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MRANVRRYKTAQLLLSAALVAPEDRSVYFHDVVRGLFTTATTKHTSIIKC
VDRRGNIRLYILEHHPLTHEGLPSLLLRIERVSPTRHFTDRPVELNERTL
KKRRRRPLWLISRRRKGGTGWGEVEGGWEGEGEGKEEEMRRRREEEEEEE
ERRGRDKEERGEGGRKGEDEGKREEEEEEEVFRFPGIACVPSSPSLGLVS
SAQLLLTLGQTDISDGGVLIFGDGSRHPIVSARGRARGREGGRAKSRPSP
LAVRETSAAEAAAAVVRETSATAAQADDCNFDRQTNDPPPFPSLLPSLSS
SHLYSLSSLATAAASAARSLSTGREEENDGLI*
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Synonyms
Publications