NO26G01660, NO26G01660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01660 vs. NCBI_GenBank
Match: EWM30665.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 117.9 bits (294), Expect = 1.900e-22 Identity = 105/382 (27.49%), Postives = 161/382 (42.15%), Query Frame = 0 Query: 39 HDQGDRRQSPNTSIAGVASSCVRCRRSKTRCNGTVPCQRCFRLALSCYPQFHSINRRGRHGHGHRRDAGAP-----QADGETTSS------KGGRTGGLKPA--------------SCLVDLAIKRVDPLPMTQLFLSAFHQLYRQNKLDRAKL--------IPLLRAWKLQSVLAGQDVSWGMVDIMSKTLGLSSTEIESLDSLRSD---STLEHRQACLRAKLKTTMERSQGLKHTSCFKQADNGVHAVHLLVLTEQGAMLRATNGSRDRYFRHQNELILDALERKTIHMLLAAGLIAPEDRYALYYDSLAAGFGIESKPV--------TSFTKIYNSHGEIQLYIMQYKPVVVNGHSGILNIMEQLPRSRHITERPGST 377 H D + NT G A C+RCR+ K C G++PC RCF L+L C PQ R G+ D P +A G SS +GG K + L++L R+DP P+ ++L + ++ ++ +A L L+R W L S + G D SWGM ++ L S + E + L D S + + R + M + Q A+HL T G ML TN + D YFR + + D + RKT+ +L GL++PEDR + A + P+ T K+ + G IQL++++ + + G + +E PRS H+T+ GST Sbjct: 45 HQTEDNTITGNTKTRGTA--CMRCRKLKVHCTGSLPCLRCFHLSLVCRPQV----PRPYKGNDSAEDCRCPSEKVKRARGSKHSSCTGVRKRGGDQRNKKDVEDALAIAMRAETDRTILLELIFDRMDPRPLAGIYLDSIMEVKTWDEKSKAALSTLRTSWFANLIRTWWLHSTVVGADTSWGMAREVALLLNFSPIDFEDTERLHLDYPLSVMRKQSEKFRDFVANGMLQIQQHPAFKALLAEVPPSTAIHLTCNTPNGLMLEVTNDAFDTYFRGADRMYNDIVLRKTMPCILYLGLVSPEDRREWTRFMIEA---VSKGPLNANGEWRKTQIFKLVCTEGNIQLFLVKARFLPSVGTGSVAITLEPCPRSNHVTKIAGST 417
BLAST of NO26G01660 vs. NCBI_GenBank
Match: XP_005854767.1 (hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526] >XP_005855415.1 hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >EKU20946.1 hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >EKU21594.1 hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 105.5 bits (262), Expect = 9.600e-19 Identity = 78/301 (25.91%), Postives = 127/301 (42.19%), Query Frame = 0 Query: 59 CVRCRRSKTRCNGTVPCQRCFRLALSCYPQFHSINRRGRHGHGHRRDAGAPQADGETTSSKGGRTGGLKPASCLVDLAIKRVDPLPMTQLFLSAFHQLYRQNKLDRAKLIPLLRAWKLQSVLAGQDVSWGMVDIMSKTLGLSSTEIESLDSLRSD--STLEHRQACLRAKLKTTMERSQGLKHTSCFKQADNGVHAVH---LLVLTEQGAMLRATNGSRDRYFRHQNELILDALERKTIHMLLAAGLIAPEDRYALYYDSLAAGFGIESKPVTSFTKIYNSHGEIQLYIMQYKPVVVNGHS 355 C CR S+T+C+G PC RC RL++ C P K +++ + P P +++L AF +L+ K+ R + L+ W+ S LAG DV+ G+ + K +S+ E+E + D S + +++ + R+Q LK T FK+ + G A L+ +T + M A N + EL AL+RK I L A L APEDR + + FG E T F K+Y+ G ++L + + + + H+ Sbjct: 54 CYACRASRTKCSGGFPCARCSRLSVCCLP------------------------------------NNWKREEPILEYVLTTHSPKPFAEMYLQAFERLFIAGKIRRDSALRTLKMWEFLSSLAGADVTLGVASHVQKRFNVSAIELEEPMRMLQDPPSHVRYQRLQQYQSSAASQARTQQLKETEIFKRENEGTRASRASLLMFVTNRSTMWAACNEFHAARLKEATELWDKALQRKLIWSYLMAPLYAPEDRRTYIDNIVEMIFGHEKLTKTMFFKMYDKDGSVKLCLHTARTIRLGPHT 318
BLAST of NO26G01660 vs. NCBI_GenBank
Match: EWM21361.1 (hypothetical protein Naga_100666g2 [Nannochloropsis gaditana]) HSP 1 Score: 89.7 bits (221), Expect = 5.500e-14 Identity = 60/229 (26.20%), Postives = 113/229 (49.34%), Query Frame = 0 Query: 162 LDRAKLIPLLRAWKLQSVLAGQDVSWGMVDIMSKTLGLSSTEIESLDSLRSDSTLEHRQACLRAKLKTTMERSQGLKHTSCFKQADNGVH--AVHLLVLTEQGAMLRATNGSRDRYFRHQNELILDALERKTIHMLLAAGLIAPEDRYALYYDSLAAGFGIESK--PVTSFTKIYNSHGEIQLYIMQYKPVVVNGHSGILNIMEQLPRSRHITERPGSTRSVIHSFRHY 387 +DR ++I +R W+ S+L G DV+WGM D + +++G+S+ ++E S+ T R+ + ++ + ++ +K H L L +++ TN + DR ++ A +T +LL A L+AP+DR + +++ + S+ T K + G+I+L I+ ++PV V SG+ + E P+S+ +T RP VI +FR + Sbjct: 15 IDRRRVIECMRIWQHLSILVGGDVTWGMADKVGRSMGISAVDVEDNASVALGPTRSRRKGRAQEEVAILVRLVDEVRTMPDYKILARTQHESVPTFLGLLAGERLVQVTNAAFDRMVEGAGRIMSSAFVHRTTCILLLAQLVAPDDR-STFFEGFIQALFVPSRCFKSTFLLKWFQGDGDIRLCIVSFRPVKVGHLSGVQILFEAAPQSKRLTSRP-HRNQVIDTFRRH 241
BLAST of NO26G01660 vs. NCBI_GenBank
Match: EWM20703.1 (hypothetical protein Naga_101787g1 [Nannochloropsis gaditana]) HSP 1 Score: 86.3 bits (212), Expect = 6.000e-13 Identity = 65/220 (29.55%), Postives = 111/220 (50.45%), Query Frame = 0 Query: 145 MTQLFLSAFHQLYRQNKLDRAKLIPLLRAWKLQSVLAGQDVSWGMVDIMSKTLGLSSTEI-------------ESLDSLRSDSTLEHRQACLRAKLKTTMERSQG-LKHTSCFKQADNGVHAVHLLVLTEQGAMLRATNGSRDRYFRHQNELILDALERKTIHMLLAAGLIAPEDRYALYYDSLAAGFGIES--KPVTSFTKIYNSHGEIQLYIMQYKPV 349 M Q FL AF +++R+ LDRAK+I +L W+ S++A DVS G+ +++ L L ST++ + + R+ L R+ RAK + SQ LK + + AD+GV + ++ + +L+ TN D+ L L +KTI LL A LI+P+DR +L++ LA + V K++++ G+++LY+ + V Sbjct: 1 MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAK---EGKGSQSLLKESVAWMMADDGVVPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDR-SLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQV 216
BLAST of NO26G01660 vs. NCBI_GenBank
Match: EWM20491.1 (hypothetical protein Naga_100382g3 [Nannochloropsis gaditana]) HSP 1 Score: 69.3 bits (168), Expect = 7.600e-8 Identity = 74/300 (24.67%), Postives = 129/300 (43.00%), Query Frame = 0 Query: 132 LVDLAIKRVDPLPMTQLFLSAFHQLYRQNKLDRAKLIPLLRAWKLQSVLAGQDVSWGMVDIMSKTLGLSSTE--------IESLDSLRSDSTLE--HRQACLRAKLK-----TTMER-----------------SQGLKHTSCFKQADNGVHAVHLL-VLTEQGAMLRATNGSRDRYFRHQNELILDALERKTIHMLLAAGLIAPEDRYALYYDSLAAGFGIESKP----------------VTSFTKIYNSHGEIQLYIMQYKPVVVNGHSG------ILNIMEQLPRSRHITERPGST 377 L+ ++RVD M + FL AFH + R+ K+ R ++ +LR WK S LAG+D++ G+ ++ L + + E ++ +S DS+L H + +L TT+E + LK + F++ D+G + L+ V + ++ A+N + F L+ + L R + L A +A DR + +L A +P + F KI++ G ++LY + + V+ G L ME +P SR+IT+RP T Sbjct: 34 LLGTILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAGEDLTLGIGAAIANALKVEAWELQYRGGDTVKRSESWTGDSSLGIIHTPNSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLKASPLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLEPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPERGRRRDGVPRRERLLYSEFLKIFSRDGHVRLYWARLAQLEVSMREGEEEKMHFLLWMEPVPASRYITDRPEKT 333
BLAST of NO26G01660 vs. NCBI_GenBank
Match: XP_005855698.1 (hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526] >EKU20665.1 hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 68.6 bits (166), Expect = 1.300e-7 Identity = 57/240 (23.75%), Postives = 107/240 (44.58%), Query Frame = 0 Query: 133 VDLAIKRVDPLPMTQLFLSAFHQLYRQNKLDRAKLIPLLRAWKLQSVLAGQ--DVSWGMVDIMSKTLGLSSTEIESLDSLRSDSTLEHRQACLRAKLKTTMERSQGLKHTSCFKQADNGVHAVHLLVLTEQGAMLRATNGSRDRYFRHQNELILDALERKTIHMLLAAGLIAPEDRYALYYDSLAAGFGIESKPVTSFTKIYNSHGEIQLYIMQYKPVVVN-GHSGILNIMEQLPRSRHI 370 +D ++ +D M L+L AF +L ++ L+R + I LL+ W+ + G D + G+ + ++ E+ S S+ + + + L + +G K + FKQ ++G A+ + L + L N YFR E + DA R+ + L A + P+DR + + + + G T K + H ++ L++ + + V ++ G L + E P SRHI Sbjct: 126 LDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELGSPSSILDGAVSDAERRRLWMSHANRL-GGEGAKSDAIFKQLNDGSRAIRMECLGGKERRL-VVNDVYLTYFRRPEEFMKDAWARRCLIGFLLAATVVPDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPGEFVSLIMFEPAPPSRHI 363 The following BLAST results are available for this feature:
BLAST of NO26G01660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01660 ID=NO26G01660|Name=NO26G01660|organism=Nannochloropsis oceanica|type=gene|length=6239bpback to top protein sequence of NO26G01660.1 >NO26G01660.1-protein ID=NO26G01660.1-protein|Name=NO26G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1010bpback to top Synonyms
Publications
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