NO26G01650, NO26G01650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01650 vs. NCBI_GenBank
Match: EWM23191.1 (r-snare vamp72-family [Nannochloropsis gaditana]) HSP 1 Score: 164.1 bits (414), Expect = 4.800e-37 Identity = 94/203 (46.31%), Postives = 129/203 (63.55%), Query Frame = 0 Query: 9 TAIHLLGVLRLSDRTVLSSYAPSATSSSFPPSLLRELAATHPTLRPYKRQTEEGPDVSIHFFLDDQGLLYACVTDKSYPSRVIFALLEETRQDFASRHNALKVPEGER--ERGQGVFAKQDKKWLKELVGKYKEPATVDELYAVSEKVEVTRGIMQESIATLLQNDEKLQSLAQATESLTHQAKAFQRRTSALRANLQWEAWR 210 T I +LGV+R+ DR +LSSY +SSSF PSLL LAA +P RQ++E D + H +DD GLLYAC++ K+YPSR+IF LLEE +++F + H ++ + E + G F+KQDK WL+ L KY+E A VD+L ++ +KV+ T G MQ+SIATLL++D AF RRTSALR+ +QWEA R Sbjct: 7 TEIFVLGVVRVIDRKLLSSY----SSSSFHPSLLVSLAAAYPAFEANLRQSKECSDSNFHSLVDDGGLLYACLSAKNYPSRLIFTLLEEIQENFVAHHTREQIDKAEEGGSKENGQFSKQDKSWLQGLAKKYREAACVDKLQSIQKKVDATCGTMQDSIATLLESDXXXXXXXXXXXXXXXXXXAFHRRTSALRSRVQWEAIR 205
BLAST of NO26G01650 vs. NCBI_GenBank
Match: CBN77436.1 (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE), Vesicle-associated membrane protein [Ectocarpus siliculosus]) HSP 1 Score: 125.2 bits (313), Expect = 2.500e-25 Identity = 74/201 (36.82%), Postives = 117/201 (58.21%), Query Frame = 0 Query: 11 IHLLGVLRLSDRTVLSSYAPSATSSSFPPSLLRELAATHPT-LRPYKRQTEEGPDVSIHFFLDDQGLLYACVTDKSYPSRVIFALLEETRQDFASRHNALKVPEGERERGQGVFAKQDKKWLKELVGKYKEPATVDELYAVSEKVEVTRGIMQESIATLLQNDEKLQSLAQATESLTHQAKAFQRRTSALRANLQWEAWRL 211 I LGV+R +DR +++ Y+PS S +++EL + T + P KR + EG SIHF DD +Y+CVTDK YP+R+ F LLEE + F + KV + +G ++ K +L KY + VD + AV +KV+V + MQ++I +L N+E+L +++ E+L QAK FQ R+SALR ++ +A ++ Sbjct: 5 ITFLGVIRFTDRVLVAGYSPSEADDSL---IIKELMSNPDTFVEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLT-----KVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKM 197
BLAST of NO26G01650 vs. NCBI_GenBank
Match: XP_008608245.1 (hypothetical protein SDRG_04350 [Saprolegnia diclina VS20] >EQC38653.1 hypothetical protein SDRG_04350 [Saprolegnia diclina VS20]) HSP 1 Score: 82.0 bits (201), Expect = 2.400e-12 Identity = 58/207 (28.02%), Postives = 99/207 (47.83%), Query Frame = 0 Query: 11 IHLLGVLRLSDRTVLSSYAPSATSSSFPPSLLRELAAT--HPT----LRPYKRQTEEGPDVSIHFFLDDQGLLYACVTDKSYPSRVIFALLEETRQDFASRHNALKVPEGERERGQGVFAKQDKKWLKELVGKYKEPATVDELYAVSEKVEVTRGIMQESIATLLQNDEKLQSLAQATESLTHQAKAFQRRTSALRANLQWEAWRLS 212 + L V R SD+ +++SYA + P L L PT + P R T + HF +D+ ++Y +T YP R+ F LL +++ +H A K+P + +G K+ K L + Y + VD+L V +V+ + MQE+I +L N EK++ + Q + L+ QAK F+ +L + W+ +L+ Sbjct: 8 VKFLAVARGSDKAIIASYAHTKKDKEESPKYLDMLTKVLRAPTWKQQVAPNSRHTLDCEPNKFHFTMDNDEIVYVAITAADYPVRLAFKLLAAVQEEMTGKH-AAKLPTVK----EGGLDKECAKGLSVIATTYDDRTKVDKLAEVMAQVDAVKSTMQENIQVVLSNTEKMEMVEQKSNDLSEQAKVFRNTGKSLSRAMWWKNVKLT 209
BLAST of NO26G01650 vs. NCBI_GenBank
Match: OEU20563.1 (synaptobrevin-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 79.0 bits (193), Expect = 2.000e-11 Identity = 54/187 (28.88%), Postives = 98/187 (52.41%), Query Frame = 0 Query: 27 SYAPSATS--SSFPPSLLRELAATHPTLRPYKRQTEEGPDVSIHFFLDDQGLLYACVTDKSYPSRVIFALLEETRQDFASRHNALKVPEGERERGQGVFAKQDKKWLKELVGKYKEPATVDELYAVSEKVEVTRGIMQESIATLLQNDEKLQSLAQATESLTHQAKAFQRRTSALRANLQWEAWRLS 212 SYA + S+ PPS L + TL +K + I + D GL A +T YPSRV +L + F+++H + + + +K+ KK L++ K+ +P++VD+ V +V+ +G MQ++IA++L+N EK +A +E L QA F++R++ L+ +QW+ +++ Sbjct: 49 SYAAAVAGVVSNDPPSGLSQPG----TLGGFK--VVQSDQHQIVYGADVDGLCVATITGTQYPSRVAITMLTDLYTTFSAKHG-----DAAKTAAENSLSKKAKKVLEDSCKKFADPSSVDKAQQVLGQVDAVKGQMQDNIASMLKNTEKADDMAAKSEQLNEQASVFKKRSTDLKKQMQWKNLKMT 224
BLAST of NO26G01650 vs. NCBI_GenBank
Match: EWM27266.1 (r-snare vamp72-family [Nannochloropsis gaditana]) HSP 1 Score: 77.8 bits (190), Expect = 4.500e-11 Identity = 56/202 (27.72%), Postives = 101/202 (50.00%), Query Frame = 0 Query: 11 IHLLGVLRLSDRTVLSSYAPSATSSSFPPSLLRELAATHPTLRPYKRQTEEGPDVSIHFFLDDQGLLYACVTDKSYPSRVIFALLEETRQDFASR--HNALKVPEGERERGQGVFAKQDKKWLKELVGKYKEPATVDELYAVSEKVEVTRGIMQESIATLLQNDEKLQSLAQATESLTHQAKAFQRRTSALRANLQWEAWRL 211 IH LGV R DR +++S+A + + L + ++RP + S H D +G ++ +++++YP R A LEE ++ F ++ +L+V E ++ G + L++L KY A VD+L AV KV+ + ++QE++ L N L ++ +A E L QA F+R + L+ + W+ R+ Sbjct: 10 IHFLGVARFQDRAIVASHAYNTVIDL--TGVKEVLKSDQLSVRPGVHFSFASGGSSWHLMSDVEGRIFILISERTYPVRAAHACLEEFQRSFLAKTGTKSLEVKEKGLDKSSG-------EMLRKLCEKYDNLAEVDKLAAVMNKVDAVKLVLQENVQVALANCVALDNIEKAAEDLQAQAGMFKRNATTLKKQMCWKQLRM 202
BLAST of NO26G01650 vs. NCBI_GenBank
Match: OQR99240.1 (hypothetical protein ACHHYP_07153 [Achlya hypogyna]) HSP 1 Score: 77.4 bits (189), Expect = 5.900e-11 Identity = 55/207 (26.57%), Postives = 96/207 (46.38%), Query Frame = 0 Query: 11 IHLLGVLRLSDRTVLSSYAPSATSSSFPPSLLRELAAT--HPT----LRPYKRQTEEGPDVSIHFFLDDQGLLYACVTDKSYPSRVIFALLEETRQDFASRHNALKVPEGERERGQGVFAKQDKKWLKELVGKYKEPATVDELYAVSEKVEVTRGIMQESIATLLQNDEKLQSLAQATESLTHQAKAFQRRTSALRANLQWEAWRLS 212 + L V R D+T+++SYA + P L L PT + P R T + HF +D+ ++Y +T YP R+ F L+ ++D A++ A P E + V K + Y + VD++ V +V+ + MQE+I +L N EK++++ Q + L+ QAK F+ +L + W+ +L+ Sbjct: 8 VKFLAVARAGDKTIVASYAHTKKDKEETPKYLDMLGKVLKAPTWKQQVTPNSRHTLDCEPNKFHFTMDNDEIVYCAITAADYPIRLAFKLITAVQEDVAAKFAAKIGPAKEASLDKDV-----AKSFGTIATTYDDRTKVDKIAEVMAQVDAVKSTMQENIQVVLSNTEKMETVEQKSNDLSEQAKVFRNTGKSLSRAMWWKNLKLT 209
BLAST of NO26G01650 vs. NCBI_GenBank
Match: OQR95953.1 (hypothetical protein THRCLA_07440 [Thraustotheca clavata]) HSP 1 Score: 73.9 bits (180), Expect = 6.500e-10 Identity = 51/207 (24.64%), Postives = 100/207 (48.31%), Query Frame = 0 Query: 11 IHLLGVLRLSDRTVLSSYAPSATSSSFPPSLLRELAAT--HPT----LRPYKRQTEEGPDVSIHFFLDDQGLLYACVTDKSYPSRVIFALLEETRQDFASRHNALKVPEGERERGQGVFAKQDKKWLKELVGKYKEPATVDELYAVSEKVEVTRGIMQESIATLLQNDEKLQSLAQATESLTHQAKAFQRRTSALRANLQWEAWRLS 212 + + + R +D+ +++SYA + P + L PT + P + T + HF LD+ L+Y +T YP R+ F L+ +++ S++ A K+ ++ G K K L + +Y + VD++ V +V+ + MQE+I +L N EK++++ Q + L+ QAK F+ +L + W+ +++ Sbjct: 522 VKFIAIARAADKVIIASYAHTKKDKEDAPKYVEMLTKVLRAPTWKQQVTPNSKHTLDCEPNKFHFTLDNDELVYCAITAADYPIRLAFKLIAAVQEEITSKY-ASKIMTA-KDNG---LDKDCAKSLSVIATQYDDRTKVDKIAEVMAQVDAVKSTMQENIQVVLSNTEKMETVEQKSNDLSEQAKVFRNTGKSLSRAMYWKNLKMT 723
BLAST of NO26G01650 vs. NCBI_GenBank
Match: CCA17529.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 72.8 bits (177), Expect = 1.500e-9 Identity = 58/214 (27.10%), Postives = 103/214 (48.13%), Query Frame = 0 Query: 11 IHLLGVLRLSDRTVLSSYAPSATSSS------------FPPSLLRELAATHPT-LRPYKRQTEEGPDVSIHFFLDDQGLLYACVTDKSYPSRVIFALLEETRQDFASRHNALKVPEGERERGQGVFAKQDKKWLKELVGKYKEPATVDELYAVSEKVEVTRGIMQESIATLLQNDEKLQSLAQATESLTHQAKAFQRRTSALRANLQWEAWRLS 212 I +GV R +D+ ++ Y SA +S+ +LR A T T + P R + + HF + + L++A +T KSYP R+ F L++ +Q+F + + RE G K+ K ++ L +Y + VD++ V +V+ + +M +I +L N EK++ + Q T L+ QAK F+ LR + W+ +L+ Sbjct: 43 IKFIGVARATDKAIICCYFHSAKASTNVDLAECAKWKEMYAKVLR--APTWKTQVTPNARHSLDCDPNKFHFSMSNDELVFAVITVKSYPIRLAFQLIQTLQQEFVPKFATKAL--NCREHG---LDKECKSMMQTLANQYDDRTKVDKISEVLHQVDNVKSVMHTNIQVVLSNTEKMEVVEQKTNDLSEQAKVFRNSGRKLRKAMWWKNVKLT 249
BLAST of NO26G01650 vs. NCBI_GenBank
Match: XP_020072385.1 (snare-like protein [Cyberlindnera jadinii NRRL Y-1542] >ODV75346.1 snare-like protein [Cyberlindnera jadinii NRRL Y-1542]) HSP 1 Score: 72.4 bits (176), Expect = 1.900e-9 Identity = 42/143 (29.37%), Postives = 75/143 (52.45%), Query Frame = 0 Query: 54 PYKRQT-EEGPDVSIHFFLDDQGLLYACVTDKSYPSRVIFALLEETRQDFASRHNALKVPEGERERGQGVFAKQDKKWLKELVGKYKEPATVDELYAVSEKVEVTRGIMQESIATLLQNDEKLQSLAQATESLTHQAKAFQRR 196 P KRQ+ EEG H + +GL +TDK YP R F LL + D+ + H ++ + FA+ L + KY++P+ D + V ++++ T+ ++ ++I ++L+ EKL SL +ESL+ +K F ++ Sbjct: 54 PGKRQSVEEGEKYIAHAYARSEGLCAILITDKEYPVRPAFTLLNKVIDDYITEHPPIEWKNATEANSKFGFAQ-----LANYIKKYQDPSQADSIMRVQQELDETKVVLHKTIESVLERGEKLDSLVDKSESLSASSKMFYKQ 191
BLAST of NO26G01650 vs. NCBI_GenBank
Match: XP_005711800.1 (VAMP7a [Chondrus crispus] >CDF32135.1 VAMP7a [Chondrus crispus]) HSP 1 Score: 71.2 bits (173), Expect = 4.200e-9 Identity = 57/200 (28.50%), Postives = 95/200 (47.50%), Query Frame = 0 Query: 11 IHLLGVLRLSDRTVLSSYAPSATSSSFPPSLL---RELAATHPTLRPYKRQTEEGPDVSIHFFLDDQGLLYACVTDKSYPSRVIFALLEETRQDF-ASRHNALKVPEGERERGQGVFAKQDKKWLKELVGKYKEPATVDELYAVSEKVEVTRGIMQESIATLLQNDEKLQSLAQATESLTHQAKAFQRRTSALRANLQWE 207 I + V RL+DR ++ YA + S P LL E + + R T +V + D LY V + Y R F L E R++F AS N ++ Q ++ K+ L+ L KY VD++ AVS +VE +G+MQ +I +L+N E +++L T+++ ++A FQR + + + W+ Sbjct: 7 IRYVAVARLTDRVPVAEYA-AIDSREVPTKLLDEKLEKVLRSGRVEEHTRLTITDREVGSIHYDSDPVCLYLVVCAREYQQRNAFKFLGEVRREFDASFGNDVQTAR------QSGLSRPAKELLRSLCEKYNSVQNVDKVAAVSLQVEEVKGVMQNNIQNVLRNQENIETLLDQTDTMKNEATGFQRSANRAKDKMWWK 199 The following BLAST results are available for this feature:
BLAST of NO26G01650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01650 ID=NO26G01650|Name=NO26G01650|organism=Nannochloropsis oceanica|type=gene|length=1338bpback to top protein sequence of NO26G01650.1 >NO26G01650.1-protein ID=NO26G01650.1-protein|Name=NO26G01650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=212bpback to top Synonyms
Publications
|