NO26G01640, NO26G01640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01640 vs. NCBI_GenBank
Match: CEL95477.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 177.6 bits (449), Expect = 6.300e-41 Identity = 89/180 (49.44%), Postives = 124/180 (68.89%), Query Frame = 0 Query: 140 AANAMERMKKELAQ----EKRQKIITAVGSVLGAVALFFYQHTHPVEA--ITILRKMQSESPTIQ-MVVGNGRPTVVDFYAEWCENCKEMAPVLRAVESKYKDKVNFVVIDGDGRDQASAGLVERFRVDGIPHLALMTNEGEVKTALIGKVPKKVLEADIDSLIAGRALPYEGYDAFEDD 313 AA A ER ++ + E+R+ + A+GS LG L+ Q +P+ A + ILR+M+ +SP + + NGRPTV+DFYA WCENCK MAP +R +E +Y +VNFV +DG D +S LV+RFRVD IPH+AL++ GE+ TALIG +PK+VL+AD D+L++ R LPY GYDAF+ D Sbjct: 14 AAAAREREREAAVEALNVERRENMRVALGSGLGGALLYGGQRLNPLRADPLVILREMERDSPPVDAQLFTNGRPTVIDFYAPWCENCKTMAPSMRTIEKEYSGRVNFVTVDGSRSDTSSQRLVQRFRVDAIPHIALVSARGEILTALIGLIPKEVLKADFDALLSDRPLPYIGYDAFDGD 193
BLAST of NO26G01640 vs. NCBI_GenBank
Match: CBN79979.1 (thioredoxin-like protein [Ectocarpus siliculosus]) HSP 1 Score: 174.5 bits (441), Expect = 5.300e-40 Identity = 83/165 (50.30%), Postives = 117/165 (70.91%), Query Frame = 0 Query: 154 EKRQKIITAVGSVLGAVALFFYQHT--HPVEA--ITILRKMQSESPTIQMVVGNGRPTVVDFYAEWCENCKEMAPVLRAVESKYKDKVNFVVIDGDGRDQASAGLVERFRVDGIPHLALMTNEGEVKTALIGKVPKKVLEADIDSLIAGRALPYEGYDAFEDDNH 315 EK + A GS L AV LFF+QH P +A + +LR M++ S + + NG+PTVVDFYA+WCENCK MAP +R +E ++K+++NFVV+DG + + LV+ FRVDGIPHLA++ GEV+TA+IG VPK V+ DI +L+AGR LP++G+D FE ++H Sbjct: 106 EKARNTKIAFGSFLSAVGLFFFQHAAIAPAQANPVVLLRAMETSSAPLATALTNGKPTVVDFYADWCENCKAMAPSMREIEEQFKNQINFVVVDGSA--EKNYDLVDAFRVDGIPHLAMVNGNGEVETAIIGAVPKDVVVDDIKALLAGRPLPFKGFDMFEGEDH 268
BLAST of NO26G01640 vs. NCBI_GenBank
Match: XP_002179599.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48585.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 157.9 bits (398), Expect = 5.200e-35 Identity = 77/156 (49.36%), Postives = 110/156 (70.51%), Query Frame = 0 Query: 152 AQEKRQKIITAVGSVLGAVALFFYQHTHPVEAITILRKMQSESPTIQMVVGNGRPTVVDFYAEWCENCKEMAPVLRAVESKYKDKVNFVVIDGDGRDQASAGLVERFRVDGIPHLALMTNEGEVKTALIGKVPKKVLEADIDSLI--AGRALPYEG 306 A +R+ + AVGS+ A+A F +Q HP+E + +L MQ+ESP + ++ NG+PTVVDF+A WCENCK +AP L +E +Y DKVNFV+++ D R+ S ++ F VD IPHLAL++ G+V+TALIG +PK+VL AD+D L+ A RA P +G Sbjct: 171 ASLRRRNLNVAVGSIALALANFAWQFFHPIEPVQLLMSMQAESPPLSVIGKNGKPTVVDFWAPWCENCKLIAPTLLQIEQEYGDKVNFVMVNADKREAWS--FIDAFGVDAIPHLALVSANGDVETALIGPIPKRVLRADLDVLLENAARASPADG 324
BLAST of NO26G01640 vs. NCBI_GenBank
Match: EJK71830.1 (hypothetical protein THAOC_06690 [Thalassiosira oceanica]) HSP 1 Score: 151.4 bits (381), Expect = 4.800e-33 Identity = 81/177 (45.76%), Postives = 113/177 (63.84%), Query Frame = 0 Query: 151 LAQEKRQKIITAVGSVLGAVALFFYQHTHPVEAITILRKMQSESPTIQMVVGNGRPTVVDFYAEWCENCKEMAPVLRAVESKYKDKVNFVVIDGD-GRDQASAGLVERFRVDGIPHLALMTNEGEVKTALIGKVPKKVLEADIDSLIAGRA-----------------LPYEGYDAF 310 L Q + + I AV S A+ + +Q +HPV AI+IL MQS S +I+ + NG+PTV+DF+A WCENCK AP L+AVE Y D+VNF++++ D GR+ L++ F VD IPHLAL++ EG+V+TALIG + VL+ADID+L+ +A LPY+ YDAF Sbjct: 94 LKQNRMRNIAVAVASFSVAIFNYGWQLSHPVSAISILASMQSSSQSIETIGNNGKPTVIDFWAPWCENCKVAAPTLQAVEKDYGDRVNFIMVNADEGRNWP---LIQLFGVDAIPHLALLSGEGDVETALIGPTSRTVLKADIDALLNKKADCDAAVAEAKQPVCHDDLPYKMYDAF 267
BLAST of NO26G01640 vs. NCBI_GenBank
Match: GAX17050.1 (hypothetical protein FisN_5Hh435 [Fistulifera solaris]) HSP 1 Score: 150.2 bits (378), Expect = 1.100e-32 Identity = 67/154 (43.51%), Postives = 105/154 (68.18%), Query Frame = 0 Query: 148 KKELAQEKRQKIITAVGSVLGAVALFFYQHTHPVEAITILRKMQSESPTIQMVVGNGRPTVVDFYAEWCENCKEMAPVLRAVESKYKDKVNFVVIDGDGRDQASAGLVERFRVDGIPHLALMTNEGEVKTALIGKVPKKVLEADIDSLIAGRAL 302 K ++ Q +++ ++ A+ ++ A+ + +Q THPV +++L +M ES Q++ N +PT+VDF+A WCENC+ MAP LRA+ +YKD++NFV I+ D D+ L+ F VD IPHLAL+ +G+V+TALIG VPK +L AD+D L+ A+ Sbjct: 44 KPDVTQFRQRNVVVAIVAIALAIGQYAWQFTHPVTPVSLLMQMTQESSAPQIIGTNNKPTLVDFWAPWCENCRIMAPTLRALHEEYKDQINFVTINADATDRNPWPLINAFGVDAIPHLALVNAQGDVETALIGLVPKSILSADLDVLLRNAAI 197
BLAST of NO26G01640 vs. NCBI_GenBank
Match: GAX25342.1 (hypothetical protein FisN_5Lh435 [Fistulifera solaris]) HSP 1 Score: 149.8 bits (377), Expect = 1.400e-32 Identity = 68/154 (44.16%), Postives = 104/154 (67.53%), Query Frame = 0 Query: 148 KKELAQEKRQKIITAVGSVLGAVALFFYQHTHPVEAITILRKMQSESPTIQMVVGNGRPTVVDFYAEWCENCKEMAPVLRAVESKYKDKVNFVVIDGDGRDQASAGLVERFRVDGIPHLALMTNEGEVKTALIGKVPKKVLEADIDSLIAGRAL 302 K + Q +++ ++ A+ ++ A+ + +Q THPV +++L +M ES Q++ N +PT+VDF+A WCENC+ MAP LRA+ +YKD++NFV I+ D D+ L+ F VD IPHLAL+ +G+V+TALIG VPK +L AD+D L+ AL Sbjct: 8 KPNVTQFRQRNLVVAIMAIALAIGQYAWQFTHPVTPVSLLMQMTQESSAPQIIGTNNKPTLVDFWAPWCENCRIMAPTLRALHEEYKDQINFVTINADATDRNPWPLINAFGVDAIPHLALVNAQGDVETALIGLVPKSILSADLDVLLRNAAL 161
BLAST of NO26G01640 vs. NCBI_GenBank
Match: OSX73179.1 (hypothetical protein BU14_0371s0013 [Porphyra umbilicalis]) HSP 1 Score: 133.3 bits (334), Expect = 1.400e-27 Identity = 69/169 (40.83%), Postives = 105/169 (62.13%), Query Frame = 0 Query: 139 DAANAMERMKKELAQEKRQKIITAVGSVLGAVALFFYQHTHPVEAITILRKMQSESPTIQMVVGNGRPTVVDFYAEWCENCKEMAPVLRAVESKYKDKVNFVVIDGDGRDQASAGLVERFRVDGIPHLALMTNEGEVKTALIGKVPKKVLEADIDSLIAGRALPYEGYD 308 DAA A ER R + + +G +GA AL+F +PV +TIL ++ + SPT + V + RPTV++FYA+WC C++ A L +E++Y VNFV++ D ++A+A LV+++ VDGIP L L+ G V T IG VPK++L DID++++G+ LP G D Sbjct: 53 DAALAKER--------TRDRTLAVIGPAIGA-ALYFLVAANPVSPLTILHQLDASSPTPEAVAASNRPTVMEFYADWCAACRDGAAGLSLLEARYAPDVNFVLV--DAANEANAALVDKWGVDGIPRLVLLDRRGAVLTNFIGGVPKEILAEDIDAMLSGKPLPNLGLD 210
BLAST of NO26G01640 vs. NCBI_GenBank
Match: XP_002289795.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED93332.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 127.1 bits (318), Expect = 9.800e-26 Identity = 60/108 (55.56%), Postives = 83/108 (76.85%), Query Frame = 0 Query: 190 MQSESPTIQMVVGNGRPTVVDFYAEWCENCKEMAPVLRAVESKYKDKVNFVVIDGD-GRDQASAGLVERFRVDGIPHLALMTNEGEVKTALIGKVPKKVLEADIDSLI 297 MQS+S + + NG+PTV+DF+A WC NCK AP L+AVE +Y D+VNF++++GD GR+ L+E F VD IPHLAL++ EG+V+TALIG + K+VLEADID+L+ Sbjct: 1 MQSQSAPLTAIGNNGKPTVIDFWAPWCSNCKVAAPTLQAVEKEYGDRVNFIMVNGDEGRNWP---LIELFGVDAIPHLALVSGEGDVETALIGPMSKRVLEADIDALL 105
BLAST of NO26G01640 vs. NCBI_GenBank
Match: WP_007357669.1 (MULTISPECIES: thiol:disulfide interchange protein [Kamptonema] >CBN58492.1 thioredoxin domain-containing protein [[Oscillatoria] sp. PCC 6506]) HSP 1 Score: 114.4 bits (285), Expect = 6.500e-22 Identity = 55/161 (34.16%), Postives = 93/161 (57.76%), Query Frame = 0 Query: 143 AMERMKKELAQEKRQKIITAVGSVLGAVALFFYQHTHPVEAITILRKMQSESPTIQMVVGNGRPTVVDFYAEWCENCKEMAPVLRAVESKYKDKVNFVVIDGDGRDQASAGLVERFRVDGIPHLALMTNEGEVKTALIGKVPKKVLEADIDSLIAGRALPY 304 A ++++ A+ R +I LG Q P A+T +M S +++ V NG+PT+V+FYA WC +C+ MA + V+ KY D++NF +++ D V ++RVDGIPH +++ GE IG+ P+ ++E+++++LIAG+ALPY Sbjct: 13 ASQKLESNTAKRLRNLLIVLAAIALGISLFLGLQIETPSNALT---EMAEASTPLEVAVSNGKPTLVEFYANWCGSCQAMAKDMSEVKEKYSDRINFAMLNVDNNKWLPE--VLKYRVDGIPHFVFLSDRGEAIAQTIGEAPRNIMESNLEALIAGKALPY 168
BLAST of NO26G01640 vs. NCBI_GenBank
Match: WP_026100163.1 (thiol:disulfide interchange protein [Fortiea contorta]) HSP 1 Score: 112.1 bits (279), Expect = 3.300e-21 Identity = 60/163 (36.81%), Postives = 94/163 (57.67%), Query Frame = 0 Query: 141 ANAMERMKKELAQEKRQKIITAVGSVLGAVALFFYQHTHPVEAITILRKMQSESPTIQMVVGNGRPTVVDFYAEWCENCKEMAPVLRAVESKYKDKVNFVVIDGDGRDQASAGLVERFRVDGIPHLALMTNEGEVKTALIGKVPKKVLEADIDSLIAGRALPY 304 AN+ + + R +I V LGA ALF T A L K+ + +++ V NG+P++V+FYA+WC C++MAP + +E +Y DKVNFV+++ D L ++RVDGIPH ++ +GE IG P+ V+ +++D+LIAG +LPY Sbjct: 7 ANSPTQTEITTGTRVRNFLIAIVAIALGA-ALFLGLRTETTSA--SLSKLSEAATPLEVAVSNGKPSLVEFYADWCAVCQKMAPDIAQIEQQYADKVNFVMLNVDNTKWLPEML--KYRVDGIPHFVFLSKDGESLAQTIGDQPRAVMSSNLDALIAGDSLPY 164 The following BLAST results are available for this feature:
BLAST of NO26G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01640 ID=NO26G01640|Name=NO26G01640|organism=Nannochloropsis oceanica|type=gene|length=1860bpback to top protein sequence of NO26G01640.1 >NO26G01640.1-protein ID=NO26G01640.1-protein|Name=NO26G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bpback to top Synonyms
Publications
|