NO26G01610, NO26G01610 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO26G01610 vs. NCBI_GenBank
Match: EWM23200.1 (hypothetical protein Naga_100808g2 [Nannochloropsis gaditana]) HSP 1 Score: 289.3 bits (739), Expect = 9.800e-75 Identity = 149/211 (70.62%), Postives = 174/211 (82.46%), Query Frame = 0 Query: 1 MKLSLLLLVALASASQAFLL--PSYSYSSSRPLT-TCRRATEGDAPASDDAAAXXXXXXAPTKSFKGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPLDASNLKG 209 MK + L+VA A+ + AF+L P + +SS P++ ATE D P++DD+ A AP K+FKGFGEKP K+ PPPKTKGQ+EREKYASAYD+LASKGVPEYAVYI+E E GEKDWKFVGSMAVPRNAK+DQAIYENE NL+KGA+KLHPKLVGKEK F YG+NLKKFPDEPIK+AVKP EGSG KNPVIGWLENVM+PLDASN++G Sbjct: 8 MKFLVFLVVATATIAHAFVLPRPPSAATSSLPISPALYAATENDTPSTDDSQA---TPSAPKKAFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNVRG 215
BLAST of NO26G01610 vs. NCBI_GenBank
Match: CEM11905.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 149.1 bits (375), Expect = 1.600e-32 Identity = 78/154 (50.65%), Postives = 98/154 (63.64%), Query Frame = 0 Query: 60 KSFKGFGEKPTKKAPPPKTKGQL--EREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAG---FTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPLDASNLKG 209 K FKGFG+KP K K L E +KYA AYD LA+KG+PEYAV+ + ++ W VGSMAVPR K+D IY+ E + KG FKL+PKL + G F YGYNL+ +PDEP+KVA KP G KN + W E++M+PLDAS KG Sbjct: 94 KDFKGFGDKPPKPVKKGKKDNDLDPEAQKYAKAYDELAAKGIPEYAVWARPKGLPDEAWVPVGSMAVPRKMKIDDVIYKEEEQMKKGLFKLYPKLKESPEGGEAEFEYGYNLRAYPDEPVKVAKKP--QGGEKNEFVQWFESLMNPLDASKAKG 245
BLAST of NO26G01610 vs. NCBI_GenBank
Match: OEU16248.1 (hypothetical protein FRACYDRAFT_261155 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 119.4 bits (298), Expect = 1.300e-23 Identity = 65/144 (45.14%), Postives = 90/144 (62.50%), Query Frame = 0 Query: 63 KGFGE-KPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPLDASN 206 KGFG TKK K+ GQ+ERE+ +S YD +A G EYAV++++ + + W GS+AV R +V AI+ NE L G + PKL+G E A F YGYNLK +PDEP++VA K G GP + W+ N++SP+DAS+ Sbjct: 42 KGFGNVDDTKKVEKSKSDGQVERERASSKYDEIAKSGGQEYAVFVRQFGSPDDSWLPCGSVAVARGDQVSNAIFGNEEALKIGIVRTFPKLMGSE-AEFEYGYNLKIYPDEPVEVASKRAGGDGPS--IGNWMSNLLSPIDASS 182
BLAST of NO26G01610 vs. NCBI_GenBank
Match: XP_002185481.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42968.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 115.2 bits (287), Expect = 2.500e-22 Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 0 Query: 63 KGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPLDASNL 207 KGFG P K K++GQ++REK +S YD +A G EY++++++ + ++ W GS+AVPRNA+V A+Y N+ L K + +PKL G E+ F +GYNLK +PD+PI+VAVK G + V W+ ++SP+DAS + Sbjct: 36 KGFGAGPEPK--KAKSEGQVKREKESSKYDEIAGTGGQEYSIFVRQFGSDDQSWLPCGSVAVPRNAQVSDAVYANDEALRKAIVRTYPKLRGSEEE-FEFGYNLKVYPDDPIEVAVKGKPRPGGLS-VGNWISTLLSPVDASKV 175
BLAST of NO26G01610 vs. NCBI_GenBank
Match: GAX14038.1 (hypothetical protein FisN_5Lh039 [Fistulifera solaris]) HSP 1 Score: 112.5 bits (280), Expect = 1.600e-21 Identity = 63/150 (42.00%), Postives = 95/150 (63.33%), Query Frame = 0 Query: 63 KGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVI---GWLENVMSPLDASNLKGN 210 KGFGEKP AP K++GQ++RE YD LA G EY++++++ + +K W G++AVPR ++V AIY NE +L + +PKL G E A F +G+NLK +PD+P++VAVK PK + W+ ++SP+DAS++K N Sbjct: 48 KGFGEKP---APKVKSEGQIKREAERQRYDELAKTG-QEYSIFVRQFGSDDKAWLPCGAIAVPRGSQVSDAIYANENDLKAAIVRTYPKLRGFE-AEFEFGFNLKVYPDDPVEVAVK----GKPKETGLSLGNWISTLLSPVDASSVKPN 188
BLAST of NO26G01610 vs. NCBI_GenBank
Match: GAX17396.1 (hypothetical protein FisN_5Hh039 [Fistulifera solaris]) HSP 1 Score: 111.3 bits (277), Expect = 3.600e-21 Identity = 62/150 (41.33%), Postives = 95/150 (63.33%), Query Frame = 0 Query: 63 KGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVI---GWLENVMSPLDASNLKGN 210 KGFG+KP AP K++GQ++RE YD LA G EY++++++ + +K W G++AVPR ++V AIY NE +L + +PKL G E A F +G+NLK +PD+P++VAVK PK + W+ ++SP+DAS++K N Sbjct: 46 KGFGDKP---APKVKSEGQIKREAERQRYDELAKTG-QEYSIFVRQFGSDDKAWLPCGAIAVPRGSQVSDAIYANENDLKAAIVRTYPKLRGFE-AEFEFGFNLKVYPDDPVEVAVK----GKPKEAGLSLGNWISTLLSPVDASSVKPN 186
BLAST of NO26G01610 vs. NCBI_GenBank
Match: XP_002287252.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94695.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 110.5 bits (275), Expect = 6.200e-21 Identity = 57/144 (39.58%), Postives = 86/144 (59.72%), Query Frame = 0 Query: 63 KGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPLDASNL 207 KGFG P K+ GQ++RE+ AS YD +A+ G EY +++++ + +K W GS+AVPR ++V AI+ NE L + +P L G E F YGYNLK +PD+P++VA+K G V W+ N++SP+D S + Sbjct: 41 KGFG--PPXXXXKKKSAGQVDREQKASKYDEIAATGGQEYRIFVRQFGSDDKSWLPTGSIAVPRGSQVSDAIFSNEEGLRTAIVRAYPALKGNE-IEFEYGYNLKVYPDDPVQVAMKGQGGVSSGPSVGNWISNLLSPVDTSGV 181
BLAST of NO26G01610 vs. NCBI_GenBank
Match: CBJ26395.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 103.2 bits (256), Expect = 9.900e-19 Identity = 56/138 (40.58%), Postives = 86/138 (62.32%), Query Frame = 0 Query: 72 KAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPK-NPVIGWLENVMSPLDASNLKG 209 K PK++ ++R+ A AY+ +++ G+PEY + IK AG D+ G MAVPR+ +V +AI+E E NL K AF+++ KL ++ F YGY LK FPD+P V P+E P NPV + E ++SP++ + +KG Sbjct: 59 KVKAPKSEKSIQRDAAAKAYEEMSAAGIPEYNILIK--PAGTDDYLPAGVMAVPRSQQVSEAIFEQEENLKKAAFRVYDKLAAYDE--FEYGYTLKMFPDDP----VTPIEKRAPSTNPVGKFFEGLLSPVNTAGMKG 188
BLAST of NO26G01610 vs. NCBI_GenBank
Match: WP_009787968.1 (hypothetical protein [Lyngbya sp. PCC 8106] >EAW33444.1 hypothetical protein L8106_10667 [Lyngbya sp. PCC 8106]) HSP 1 Score: 96.7 bits (239), Expect = 9.300e-17 Identity = 57/144 (39.58%), Postives = 89/144 (61.81%), Query Frame = 0 Query: 58 PTKSFKGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPL 202 PTK +GFG+ T P +T +ER K A Y+ + S G P+Y +YI+ G+K+W VG +A+ R+++++QAI+ ++ +L++GAF+L P+L K + YGY LK+F DEPI+VAV P S I L++ +S L Sbjct: 2 PTK--QGFGKTQTPAKPSKRT---VERNKAAKEYEKMKSDGTPDYEIYIR--VQGQKNWYPVGVVAIKRSSQINQAIFGSQEDLLQGAFRLFPRL-RKHQNQLEYGYRLKEFKDEPIQVAVPPKSRSNGLQAAIASLKDRVSSL 137
BLAST of NO26G01610 vs. NCBI_GenBank
Match: WP_015172897.1 (hypothetical protein [Geitlerinema sp. PCC 7407] >AFY67333.1 hypothetical protein GEI7407_2862 [Geitlerinema sp. PCC 7407]) HSP 1 Score: 95.5 bits (236), Expect = 2.100e-16 Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 0 Query: 64 GFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMS 200 GFG + K +R+ AS YD + S G+PE+ V+++ G+K+W VGS+AV R+ +++QAI+ NE L+KGAF+L P L K YGY LK+FPDEP+++A KP G+ G L++V S Sbjct: 6 GFGTPKHAQKKEKVAKSAEKRQAAASQYDKMKSDGMPEFVVFVR--VRGKKNWFPVGSIAVGRSNQINQAIFANEDELLKGAFRLSPHL-RKHTDDLEYGYRLKEFPDEPVQLAEKPAPGAA------GALQSVFS 132 The following BLAST results are available for this feature:
BLAST of NO26G01610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01610 ID=NO26G01610|Name=NO26G01610|organism=Nannochloropsis oceanica|type=gene|length=1379bpback to top protein sequence of NO26G01610.1 >NO26G01610.1-protein ID=NO26G01610.1-protein|Name=NO26G01610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=210bpback to top Synonyms
Publications
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