NO26G01610, NO26G01610 (gene) Nannochloropsis oceanica

Overview
NameNO26G01610
Unique NameNO26G01610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1379
Alignment locationchr26:528345..529723 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:528345..529723 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO26G01610 vs. NCBI_GenBank
Match: EWM23200.1 (hypothetical protein Naga_100808g2 [Nannochloropsis gaditana])

HSP 1 Score: 289.3 bits (739), Expect = 9.800e-75
Identity = 149/211 (70.62%), Postives = 174/211 (82.46%), Query Frame = 0
Query:    1 MKLSLLLLVALASASQAFLL--PSYSYSSSRPLT-TCRRATEGDAPASDDAAAXXXXXXAPTKSFKGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPLDASNLKG 209
            MK  + L+VA A+ + AF+L  P  + +SS P++     ATE D P++DD+ A      AP K+FKGFGEKP K+ PPPKTKGQ+EREKYASAYD+LASKGVPEYAVYI+E E GEKDWKFVGSMAVPRNAK+DQAIYENE NL+KGA+KLHPKLVGKEK  F YG+NLKKFPDEPIK+AVKP EGSG KNPVIGWLENVM+PLDASN++G
Sbjct:    8 MKFLVFLVVATATIAHAFVLPRPPSAATSSLPISPALYAATENDTPSTDDSQA---TPSAPKKAFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNVRG 215          
BLAST of NO26G01610 vs. NCBI_GenBank
Match: CEM11905.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 149.1 bits (375), Expect = 1.600e-32
Identity = 78/154 (50.65%), Postives = 98/154 (63.64%), Query Frame = 0
Query:   60 KSFKGFGEKPTKKAPPPKTKGQL--EREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAG---FTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPLDASNLKG 209
            K FKGFG+KP K     K    L  E +KYA AYD LA+KG+PEYAV+ +     ++ W  VGSMAVPR  K+D  IY+ E  + KG FKL+PKL    + G   F YGYNL+ +PDEP+KVA KP    G KN  + W E++M+PLDAS  KG
Sbjct:   94 KDFKGFGDKPPKPVKKGKKDNDLDPEAQKYAKAYDELAAKGIPEYAVWARPKGLPDEAWVPVGSMAVPRKMKIDDVIYKEEEQMKKGLFKLYPKLKESPEGGEAEFEYGYNLRAYPDEPVKVAKKP--QGGEKNEFVQWFESLMNPLDASKAKG 245          
BLAST of NO26G01610 vs. NCBI_GenBank
Match: OEU16248.1 (hypothetical protein FRACYDRAFT_261155 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 119.4 bits (298), Expect = 1.300e-23
Identity = 65/144 (45.14%), Postives = 90/144 (62.50%), Query Frame = 0
Query:   63 KGFGE-KPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPLDASN 206
            KGFG    TKK    K+ GQ+ERE+ +S YD +A  G  EYAV++++  + +  W   GS+AV R  +V  AI+ NE  L  G  +  PKL+G E A F YGYNLK +PDEP++VA K   G GP   +  W+ N++SP+DAS+
Sbjct:   42 KGFGNVDDTKKVEKSKSDGQVERERASSKYDEIAKSGGQEYAVFVRQFGSPDDSWLPCGSVAVARGDQVSNAIFGNEEALKIGIVRTFPKLMGSE-AEFEYGYNLKIYPDEPVEVASKRAGGDGPS--IGNWMSNLLSPIDASS 182          
BLAST of NO26G01610 vs. NCBI_GenBank
Match: XP_002185481.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42968.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 115.2 bits (287), Expect = 2.500e-22
Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 0
Query:   63 KGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPLDASNL 207
            KGFG  P  K    K++GQ++REK +S YD +A  G  EY++++++  + ++ W   GS+AVPRNA+V  A+Y N+  L K   + +PKL G E+  F +GYNLK +PD+PI+VAVK     G  + V  W+  ++SP+DAS +
Sbjct:   36 KGFGAGPEPK--KAKSEGQVKREKESSKYDEIAGTGGQEYSIFVRQFGSDDQSWLPCGSVAVPRNAQVSDAVYANDEALRKAIVRTYPKLRGSEEE-FEFGYNLKVYPDDPIEVAVKGKPRPGGLS-VGNWISTLLSPVDASKV 175          
BLAST of NO26G01610 vs. NCBI_GenBank
Match: GAX14038.1 (hypothetical protein FisN_5Lh039 [Fistulifera solaris])

HSP 1 Score: 112.5 bits (280), Expect = 1.600e-21
Identity = 63/150 (42.00%), Postives = 95/150 (63.33%), Query Frame = 0
Query:   63 KGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVI---GWLENVMSPLDASNLKGN 210
            KGFGEKP   AP  K++GQ++RE     YD LA  G  EY++++++  + +K W   G++AVPR ++V  AIY NE +L     + +PKL G E A F +G+NLK +PD+P++VAVK      PK   +    W+  ++SP+DAS++K N
Sbjct:   48 KGFGEKP---APKVKSEGQIKREAERQRYDELAKTG-QEYSIFVRQFGSDDKAWLPCGAIAVPRGSQVSDAIYANENDLKAAIVRTYPKLRGFE-AEFEFGFNLKVYPDDPVEVAVK----GKPKETGLSLGNWISTLLSPVDASSVKPN 188          
BLAST of NO26G01610 vs. NCBI_GenBank
Match: GAX17396.1 (hypothetical protein FisN_5Hh039 [Fistulifera solaris])

HSP 1 Score: 111.3 bits (277), Expect = 3.600e-21
Identity = 62/150 (41.33%), Postives = 95/150 (63.33%), Query Frame = 0
Query:   63 KGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVI---GWLENVMSPLDASNLKGN 210
            KGFG+KP   AP  K++GQ++RE     YD LA  G  EY++++++  + +K W   G++AVPR ++V  AIY NE +L     + +PKL G E A F +G+NLK +PD+P++VAVK      PK   +    W+  ++SP+DAS++K N
Sbjct:   46 KGFGDKP---APKVKSEGQIKREAERQRYDELAKTG-QEYSIFVRQFGSDDKAWLPCGAIAVPRGSQVSDAIYANENDLKAAIVRTYPKLRGFE-AEFEFGFNLKVYPDDPVEVAVK----GKPKEAGLSLGNWISTLLSPVDASSVKPN 186          
BLAST of NO26G01610 vs. NCBI_GenBank
Match: XP_002287252.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94695.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 110.5 bits (275), Expect = 6.200e-21
Identity = 57/144 (39.58%), Postives = 86/144 (59.72%), Query Frame = 0
Query:   63 KGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPLDASNL 207
            KGFG  P       K+ GQ++RE+ AS YD +A+ G  EY +++++  + +K W   GS+AVPR ++V  AI+ NE  L     + +P L G E   F YGYNLK +PD+P++VA+K   G      V  W+ N++SP+D S +
Sbjct:   41 KGFG--PPXXXXKKKSAGQVDREQKASKYDEIAATGGQEYRIFVRQFGSDDKSWLPTGSIAVPRGSQVSDAIFSNEEGLRTAIVRAYPALKGNE-IEFEYGYNLKVYPDDPVQVAMKGQGGVSSGPSVGNWISNLLSPVDTSGV 181          
BLAST of NO26G01610 vs. NCBI_GenBank
Match: CBJ26395.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 103.2 bits (256), Expect = 9.900e-19
Identity = 56/138 (40.58%), Postives = 86/138 (62.32%), Query Frame = 0
Query:   72 KAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPK-NPVIGWLENVMSPLDASNLKG 209
            K   PK++  ++R+  A AY+ +++ G+PEY + IK   AG  D+   G MAVPR+ +V +AI+E E NL K AF+++ KL   ++  F YGY LK FPD+P    V P+E   P  NPV  + E ++SP++ + +KG
Sbjct:   59 KVKAPKSEKSIQRDAAAKAYEEMSAAGIPEYNILIK--PAGTDDYLPAGVMAVPRSQQVSEAIFEQEENLKKAAFRVYDKLAAYDE--FEYGYTLKMFPDDP----VTPIEKRAPSTNPVGKFFEGLLSPVNTAGMKG 188          
BLAST of NO26G01610 vs. NCBI_GenBank
Match: WP_009787968.1 (hypothetical protein [Lyngbya sp. PCC 8106] >EAW33444.1 hypothetical protein L8106_10667 [Lyngbya sp. PCC 8106])

HSP 1 Score: 96.7 bits (239), Expect = 9.300e-17
Identity = 57/144 (39.58%), Postives = 89/144 (61.81%), Query Frame = 0
Query:   58 PTKSFKGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSPL 202
            PTK  +GFG+  T   P  +T   +ER K A  Y+ + S G P+Y +YI+    G+K+W  VG +A+ R+++++QAI+ ++ +L++GAF+L P+L  K +    YGY LK+F DEPI+VAV P   S      I  L++ +S L
Sbjct:    2 PTK--QGFGKTQTPAKPSKRT---VERNKAAKEYEKMKSDGTPDYEIYIR--VQGQKNWYPVGVVAIKRSSQINQAIFGSQEDLLQGAFRLFPRL-RKHQNQLEYGYRLKEFKDEPIQVAVPPKSRSNGLQAAIASLKDRVSSL 137          
BLAST of NO26G01610 vs. NCBI_GenBank
Match: WP_015172897.1 (hypothetical protein [Geitlerinema sp. PCC 7407] >AFY67333.1 hypothetical protein GEI7407_2862 [Geitlerinema sp. PCC 7407])

HSP 1 Score: 95.5 bits (236), Expect = 2.100e-16
Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 0
Query:   64 GFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVPEYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHPKLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMS 200
            GFG     +      K   +R+  AS YD + S G+PE+ V+++    G+K+W  VGS+AV R+ +++QAI+ NE  L+KGAF+L P L  K      YGY LK+FPDEP+++A KP  G+       G L++V S
Sbjct:    6 GFGTPKHAQKKEKVAKSAEKRQAAASQYDKMKSDGMPEFVVFVR--VRGKKNWFPVGSIAVGRSNQINQAIFANEDELLKGAFRLSPHL-RKHTDDLEYGYRLKEFPDEPVQLAEKPAPGAA------GALQSVFS 132          
The following BLAST results are available for this feature:
BLAST of NO26G01610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23200.19.800e-7570.62hypothetical protein Naga_100808g2 [Nannochloropsi... [more]
CEM11905.11.600e-3250.65unnamed protein product [Vitrella brassicaformis C... [more]
OEU16248.11.300e-2345.14hypothetical protein FRACYDRAFT_261155 [Fragilario... [more]
XP_002185481.12.500e-2242.36predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX14038.11.600e-2142.00hypothetical protein FisN_5Lh039 [Fistulifera sola... [more]
GAX17396.13.600e-2141.33hypothetical protein FisN_5Hh039 [Fistulifera sola... [more]
XP_002287252.16.200e-2139.58predicted protein [Thalassiosira pseudonana CCMP13... [more]
CBJ26395.19.900e-1940.58conserved unknown protein [Ectocarpus siliculosus][more]
WP_009787968.19.300e-1739.58hypothetical protein [Lyngbya sp. PCC 8106] >EAW33... [more]
WP_015172897.12.100e-1640.44hypothetical protein [Geitlerinema sp. PCC 7407] >... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01610.1NO26G01610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600850gene_8000Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100808g2gene7253Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01610.1NO26G01610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01610 ID=NO26G01610|Name=NO26G01610|organism=Nannochloropsis oceanica|type=gene|length=1379bp
ATGAAACTCTCCCTTCTTCTCCTCGTGGCCCTGGCCAGCGCCTCCCAAGC
TTTCCTTCTGCCTTCCTACTCCTACTCCTCCTCCCGGCCCTTGACAACAT
GCCGTCGGGCGACCGgtatgtatattgcgtcctcggtgccctatagccct
cccctccttcccttctccttatgcatgttgacactagccgcagctcccat
ttgtgcttcccatttgcactctctcggtggatgagggacggctgcatgcc
tcgatctaatcctcccatccttcctcacccgtaccctcccacatgcagAG
GGCGACGCCCCTGCCAGCGATGATGCCGCCGCAGCTCCCGCATCCGCCCC
TGCCCCTACCAAATCCTTTAAGGGCTTCGGGGAGAAACCGACGAAGAAAG
CCCCCCCCCCAAAGACAAAAGGGCAGTTGGAGAGGGAAAAGTATGCGTCG
GCCTACGACACACTGGCCTCCAAGGGCGTGCCCGAATACGCCGTCTACAT
CAAAGAAGCAGAGGCCGGAGAGAAGGATTGGAAGTTCGTGGGCTCCATGG
CCGTGCCCCGTAACGCCAAGGTGGATCAAGCCATTTATGAGAACGAGgtg
cgtcttcgtccgatccctccctccctccctccctttctccctccctccct
cccttcctccctccctcccgtcctcccactgggtgattccgtggaacaga
ctgtccttctcctccccctcctccccctccccctcctccccctcctcctc
ttcctccttttcctcctcgtttgcacaccgtctacttctcattattcccg
ccggcttggatcaccaaaggcacctcacacctcacacctcccttcttccc
tccctattctccttcccctccctccccccagCCCAACCTCGTCAAGGGCG
CCTTCAAGCTTCACCCCAAGCTGGTGGGCAAGGAGAAGGCCGGCTTCACC
TACGGCTACAACCTCAAGAAATTCCCCGACGAACCCATCAAGgtacctac
ctaccttcctccctctccccctccctccctccctatttccattcgttgcc
taccacctatctccctctctgcacgccatgcctcccctgcttccctccct
ccctgcttcccttcctccctgctcagtaccggggccagtaatcccactat
tggctgaggctccctcttcccctccttccctccttccctccctccctccc
tctttggcttgacttcaaccttacttccctttctccccccccctctccct
cactcccttcacccctcccggcagGTGGCCGTCAAGCCCGTGGAAGGCAG
TGGCCCCAAGAACCCTGTCATTGGCTGGCTCGAGAATGTTATGAGTCCCC
TTGACGCCTCGAACTTGAAGGGGAATTAA
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protein sequence of NO26G01610.1

>NO26G01610.1-protein ID=NO26G01610.1-protein|Name=NO26G01610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=210bp
MKLSLLLLVALASASQAFLLPSYSYSSSRPLTTCRRATEGDAPASDDAAA
APASAPAPTKSFKGFGEKPTKKAPPPKTKGQLEREKYASAYDTLASKGVP
EYAVYIKEAEAGEKDWKFVGSMAVPRNAKVDQAIYENEPNLVKGAFKLHP
KLVGKEKAGFTYGYNLKKFPDEPIKVAVKPVEGSGPKNPVIGWLENVMSP
LDASNLKGN*
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Synonyms
Publications