NO26G01600, NO26G01600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01600 vs. NCBI_GenBank
Match: CBJ31092.1 (Rab2A, RAB family GTPase [Ectocarpus siliculosus]) HSP 1 Score: 303.1 bits (775), Expect = 6.900e-79 Identity = 145/188 (77.13%), Postives = 165/188 (87.77%), Query Frame = 0 Query: 1 MSYAYLFKSIVIGDSGVGKSCLLLQFTDKRFVQVHDLTIGVEFGARMVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSRWLEEAKLYSSPNMVIMLVGNKSDAEARRAVSTLEGQAFADEHGLLFLETSARTGQNVEAAFSSTAEKIYDNILRGIYDPNNDTHGIKVG 189 MSYAYLFK I+IGD+GVGKSCLLLQFTDKRF VHDLTIGVEFGARM+ ID + +KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+RWLEEA+ S+ NMVIML+GNKSD +RRAV+T EG+ FA+E+GL+FLETSA+ NVE AF TA KIYDNIL G+YDP N+ HGIK+G Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLG 188
BLAST of NO26G01600 vs. NCBI_GenBank
Match: XP_005763735.1 (Rab2, rab family GTPase [Emiliania huxleyi CCMP1516] >EOD11306.1 Rab2, rab family GTPase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 302.0 bits (772), Expect = 1.500e-78 Identity = 146/193 (75.65%), Postives = 168/193 (87.05%), Query Frame = 0 Query: 1 MSYAYLFKSIVIGDSGVGKSCLLLQFTDKRFVQVHDLTIGVEFGARMVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSRWLEEAKLYSSPNMVIMLVGNKSDAEARRAVSTLEGQAFADEHGLLFLETSARTGQNVEAAFSSTAEKIYDNILRGIYDPNNDTHGIKVGAPGAG 194 MSYAYLFK I+IGD+GVGKSCLLLQFTDKRF QVHDLTIGVEFGARMV +DGK IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WL++A+ +S+ NM IML+GNKSD E RRAV+ EG+AFA EHGL+FLETSA+T NVE AF STA++IY+ I +G++D N++ GIKVG AG Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQQVHDLTIGVEFGARMVTLDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLDDARTHSNSNMTIMLIGNKSDMEHRRAVTAEEGEAFAQEHGLIFLETSAKTAANVEDAFISTAKRIYEKIQQGVFDVTNESFGIKVGMAAAG 193
BLAST of NO26G01600 vs. NCBI_GenBank
Match: XP_005651281.1 (small rab-related GTPase [Coccomyxa subellipsoidea C-169] >EIE26737.1 small rab-related GTPase [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 300.1 bits (767), Expect = 5.800e-78 Identity = 146/193 (75.65%), Postives = 170/193 (88.08%), Query Frame = 0 Query: 1 MSYAYLFKSIVIGDSGVGKSCLLLQFTDKRFVQVHDLTIGVEFGARMVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSRWLEEAKLYSSPNMVIMLVGNKSDAEARRAVSTLEGQAFADEHGLLFLETSARTGQNVEAAFSSTAEKIYDNILRGIYDPNNDTHGIKVGAPGAG 194 MSYAYLFK I+IGD+GVGKSCLLLQFTDKRF VHDLTIGVEFGARM++IDGK IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WLE+A+ +++PNM IML+GNKSD RRAV+T EG+ FA EHGL+FLETSA+T NVE AF +TA KIY+ I +G++D +N+++GIKVG GAG Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKSDLTHRRAVTTEEGEQFAKEHGLVFLETSAKTAHNVEEAFINTARKIYEKIEQGVFDVSNESYGIKVGY-GAG 192
BLAST of NO26G01600 vs. NCBI_GenBank
Match: XP_023335315.1 (ras-related protein Rab-2A [Eurytemora affinis] >XP_023335316.1 ras-related protein Rab-2A [Eurytemora affinis]) HSP 1 Score: 298.1 bits (762), Expect = 2.200e-77 Identity = 143/193 (74.09%), Postives = 167/193 (86.53%), Query Frame = 0 Query: 1 MSYAYLFKSIVIGDSGVGKSCLLLQFTDKRFVQVHDLTIGVEFGARMVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSRWLEEAKLYSSPNMVIMLVGNKSDAEARRAVSTLEGQAFADEHGLLFLETSARTGQNVEAAFSSTAEKIYDNILRGIYDPNNDTHGIKVGAPGAG 194 MSYAYLFK I+IGD+GVGKSCLLLQFTDKRF VHDLTIGVEFGARM++I+GK IKLQIWDTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL+ WLE+A+ +S+ NMVIML+GNKSD EARR V EG+AFA EHGL+F+ETSA+T NVE AF +TA +IYD I G++D NN+ +GIK+G AG Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTAREIYDKIQEGVFDINNEANGIKIGPQHAG 193
BLAST of NO26G01600 vs. NCBI_GenBank
Match: XP_007479843.1 (PREDICTED: ras-related protein Rab-2B isoform X1 [Monodelphis domestica]) HSP 1 Score: 297.4 bits (760), Expect = 3.800e-77 Identity = 143/188 (76.06%), Postives = 166/188 (88.30%), Query Frame = 0 Query: 1 MSYAYLFKSIVIGDSGVGKSCLLLQFTDKRFVQVHDLTIGVEFGARMVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSRWLEEAKLYSSPNMVIMLVGNKSDAEARRAVSTLEGQAFADEHGLLFLETSARTGQNVEAAFSSTAEKIYDNILRGIYDPNNDTHGIKVG 189 M+YAYLFK I+IGD+GVGKSCLLLQFTDKRF VHDLTIGVEFGARMV+IDGK IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WLE+A+ +SS NMVIML+GNKSD E+RR V EG+AFA EHGL+F+ETSA+T NVE AF +TA++IY I +G++D NN+ +GIK+G Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNNEANGIKIG 188
BLAST of NO26G01600 vs. NCBI_GenBank
Match: XP_012399961.1 (ras-related protein Rab-2B [Sarcophilus harrisii]) HSP 1 Score: 297.4 bits (760), Expect = 3.800e-77 Identity = 143/188 (76.06%), Postives = 166/188 (88.30%), Query Frame = 0 Query: 1 MSYAYLFKSIVIGDSGVGKSCLLLQFTDKRFVQVHDLTIGVEFGARMVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSRWLEEAKLYSSPNMVIMLVGNKSDAEARRAVSTLEGQAFADEHGLLFLETSARTGQNVEAAFSSTAEKIYDNILRGIYDPNNDTHGIKVG 189 M+YAYLFK I+IGD+GVGKSCLLLQFTDKRF VHDLTIGVEFGARMV+IDGK IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WLE+A+ +SS NMVIML+GNKSD E+RR V EG+AFA EHGL+F+ETSA+T NVE AF +TA++IY I +G++D NN+ +GIK+G Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNNEANGIKIG 188
BLAST of NO26G01600 vs. NCBI_GenBank
Match: XP_782537.1 (PREDICTED: ras-related protein Rab-2A isoform X1 [Strongylocentrotus purpuratus] >XP_011661198.1 PREDICTED: ras-related protein Rab-2A isoform X2 [Strongylocentrotus purpuratus]) HSP 1 Score: 297.4 bits (760), Expect = 3.800e-77 Identity = 143/188 (76.06%), Postives = 165/188 (87.77%), Query Frame = 0 Query: 1 MSYAYLFKSIVIGDSGVGKSCLLLQFTDKRFVQVHDLTIGVEFGARMVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSRWLEEAKLYSSPNMVIMLVGNKSDAEARRAVSTLEGQAFADEHGLLFLETSARTGQNVEAAFSSTAEKIYDNILRGIYDPNNDTHGIKVG 189 MSYAYLFK I+IGD+GVGKSCLLLQFTDKRF VHDLTIGVEFGARM++IDGK IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+ WLE+A+ +SS NMVIML+GNKSD EARR V EG+AFA EHGL+F+ETSA+T NVE AF +TA++IY I G++D NN+ +GIK+G Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNKSDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQEGVFDINNEANGIKLG 188
BLAST of NO26G01600 vs. NCBI_GenBank
Match: XP_020860108.1 (ras-related protein Rab-2B [Phascolarctos cinereus]) HSP 1 Score: 297.4 bits (760), Expect = 3.800e-77 Identity = 143/188 (76.06%), Postives = 166/188 (88.30%), Query Frame = 0 Query: 1 MSYAYLFKSIVIGDSGVGKSCLLLQFTDKRFVQVHDLTIGVEFGARMVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSRWLEEAKLYSSPNMVIMLVGNKSDAEARRAVSTLEGQAFADEHGLLFLETSARTGQNVEAAFSSTAEKIYDNILRGIYDPNNDTHGIKVG 189 M+YAYLFK I+IGD+GVGKSCLLLQFTDKRF VHDLTIGVEFGARMV+IDGK IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WLE+A+ +SS NMVIML+GNKSD E+RR V EG+AFA EHGL+F+ETSA+T NVE AF +TA++IY I +G++D NN+ +GIK+G Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNNEANGIKIG 188
BLAST of NO26G01600 vs. NCBI_GenBank
Match: XP_022082327.1 (ras-related protein Rab-2A [Acanthaster planci]) HSP 1 Score: 297.4 bits (760), Expect = 3.800e-77 Identity = 143/188 (76.06%), Postives = 165/188 (87.77%), Query Frame = 0 Query: 1 MSYAYLFKSIVIGDSGVGKSCLLLQFTDKRFVQVHDLTIGVEFGARMVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSRWLEEAKLYSSPNMVIMLVGNKSDAEARRAVSTLEGQAFADEHGLLFLETSARTGQNVEAAFSSTAEKIYDNILRGIYDPNNDTHGIKVG 189 MSYAYLFK I+IGD+GVGKSCLLLQFTDKRF VHDLTIGVEFGARM++IDGK IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+ WLE+A+ +SS NMVIML+GNKSD EARR V EG+AFA EHGL+F+ETSA+T NVE AF +TA++IY I G++D NN+ +GIK+G Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNKSDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQEGVFDINNEANGIKLG 188
BLAST of NO26G01600 vs. NCBI_GenBank
Match: GAX98981.1 (Rab2 family GTPase, putative [Pythium insidiosum]) HSP 1 Score: 297.4 bits (760), Expect = 3.800e-77 Identity = 147/192 (76.56%), Postives = 162/192 (84.38%), Query Frame = 0 Query: 1 MSYAYLFKSIVIGDSGVGKSCLLLQFTDKRFVQVHDLTIGVEFGARMVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSRWLEEAKLYSSPNMVIMLVGNKSDAEARRAVSTLEGQAFADEHGLLFLETSARTGQNVEAAFSSTAEKIYDNILRGIYDPNNDTHGIKVGAPGA 193 MSYAYLFK I+IGD+GVGKSCLLLQFTDKRF VHDLTIGVEFGARM++ID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+RWLEEA+ S+ NM IML+GNKSD E RRAVS EG+ FA E+GL+FLETSA+T NVE AF TA KIY NI G+ D N+ HGIKVG G+ Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFVKTAAKIYSNIQSGVCDVTNEAHGIKVGMTGS 192 The following BLAST results are available for this feature:
BLAST of NO26G01600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01600 ID=NO26G01600|Name=NO26G01600|organism=Nannochloropsis oceanica|type=gene|length=1813bpback to top protein sequence of NO26G01600.1 >NO26G01600.1-protein ID=NO26G01600.1-protein|Name=NO26G01600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=220bpback to top Synonyms
Publications
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