NO26G01580, NO26G01580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01580 vs. NCBI_GenBank
Match: XP_005854767.1 (hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526] >XP_005855415.1 hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >EKU20946.1 hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >EKU21594.1 hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 112.1 bits (279), Expect = 1.100e-20 Identity = 68/225 (30.22%), Postives = 109/225 (48.44%), Query Frame = 0 Query: 490 PMLDLVITRVDPRAMAAMYLQAFGALQEEGKVDRGRVLRVLRTWHTLSTLVGSDVSWGCAAPMARACGISPAAIEGEENVCRDAPARYRKQRAMATLEGLLSSSST--LKNMEAFKAADDGL---NPVCLAFYTDRGGLAHATNAACDRLFRAPLEMFDDTIQQRTAHDFLSAALIAPSDREAWFHSLIDCLFSAAPRCATQIVKAFDGAGEIRLFLVTAKRVEV 710 P+L+ V+T P+ A MYLQAF L GK+ R LR L+ W LS+L G+DV+ G A+ + + +S +E + +D P+ R QR S + T LK E FK ++G L F T+R + A N + E++D +Q++ +L A L AP DR + ++++ +F T K +D G ++L L TA+ + + Sbjct: 90 PILEYVLTTHSPKPFAEMYLQAFERLFIAGKIRRDSALRTLKMWEFLSSLAGADVTLGVASHVQKRFNVSAIELEEPMRMLQDPPSHVRYQRLQQYQSSAASQARTQQLKETEIFKRENEGTRASRASLLMFVTNRSTMWAACNEFHAARLKEATELWDKALQRKLIWSYLMAPLYAPEDRRTYIDNIVEMIFGHEKLTKTMFFKMYDKDGSVKLCLHTARTIRL 314
BLAST of NO26G01580 vs. NCBI_GenBank
Match: EWM20744.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 108.6 bits (270), Expect = 1.200e-19 Identity = 85/268 (31.72%), Postives = 126/268 (47.01%), Query Frame = 0 Query: 490 PMLDLVITRVDPRAMAAMYLQAFGALQEEGKVDRGRVLRVLRTWHTLSTLVGSDV--SWGCAAPMARACGISPAAIEGEENVCRDAPARYRKQRAMATLEG--LLSSSSTLKNMEAFKAADDGLNPVCLAFYTDRGGLAHATNAACDRLFRAPLEMFDDTIQQRTAHDFLSAALIAPSDREAWFHSLIDCLFSAAPRCATQIVKAFDGAGEIRLFLVTAKRVEVEGEDGKEGGYGIVHRCEPMPPSRHITTRPDCHRIFKTFRRIRSS 754 P LDLVI R D AM +YLQAF L +EG ++R R + +L++W L ++ D ++G A + A I+ +E E + + P K R A L + L+ + A++ V +A D +N A + FR+P E D ++R FL AA +AP DR A+F L S + T +K FD G + L+L + V++ + Y + EP PPSRH+TTRPD R+ T SS Sbjct: 171 PYLDLVIERSDLPAMVPLYLQAFQDLFQEGVLNRKRAIGLLKSWVDLGVMMDGDCDPTFGAFAEVKAAFQINDLELEDPECLAYEPPLHAEKGRLWAARADRVLGEGAKHLEENLVCRQANNSSRAVYMA-RMDCKDQWVISNKAHNTYFRSPAEFMQDMWKRRCLLAFLFAAGVAPEDRLAYFKLLHFATLSTSLMKRTAFLKIFDRQGRMTLYLSDHQVVKMGPNE-----YASLCVTEPAPPSRHVTTRPDVTRLRSTHHPCNSS 432
BLAST of NO26G01580 vs. NCBI_GenBank
Match: EWM21361.1 (hypothetical protein Naga_100666g2 [Nannochloropsis gaditana]) HSP 1 Score: 108.6 bits (270), Expect = 1.200e-19 Identity = 78/234 (33.33%), Postives = 110/234 (47.01%), Query Frame = 0 Query: 521 VDRGRVLRVLRTWHTLSTLVGSDVSWGCAAPMARACGISPAAIEGEENVCRDAPARYRKQRA---MATLEGLLSSSSTLKNMEAFKAADDGLNPVCLAFYTDRGGLAHATNAACDRLFRAPLEMFDDTIQQRTAHDFLSAALIAPSDREAWFHSLIDCLFSAAPRC--ATQIVKAFDGAGEIRLFLVTAKRVEVEGEDGKEGGYGIVHRCEPMPPSRHITTRPDCHRIFKTFRR 750 +DR RV+ +R W LS LVG DV+WG A + R+ GIS +E +V RK RA +A L L+ T+ + + P L L TNAA DR+ + RT L A L+AP DR +F I LF RC +T ++K F G G+IRL +V+ + V+V G G I+ E P S+ +T+RP +++ TFRR Sbjct: 15 IDRRRVIECMRIWQHLSILVGGDVTWGMADKVGRSMGISAVDVEDNASVALGPTRSRRKGRAQEEVAILVRLVDEVRTMPDYKILARTQHESVPTFLGLLAGE-RLVQVTNAAFDRMVEGAGRIMSSAFVHRTTCILLLAQLVAPDDRSTFFEGFIQALF-VPSRCFKSTFLLKWFQGDGDIRLCIVSFRPVKV----GHLSGVQILF--EAAPQSKRLTSRPHRNQVIDTFRR 240
BLAST of NO26G01580 vs. NCBI_GenBank
Match: EWM30665.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 98.6 bits (244), Expect = 1.300e-16 Identity = 75/262 (28.63%), Postives = 119/262 (45.42%), Query Frame = 0 Query: 491 MLDLVITRVDPRAMAAMYLQAFGALQ---EEGKVDRGRV-----LRVLRTWHTLSTLVGSDVSWGCAAPMARACGISPAAIEGEENVCRDAPARYRKQRAMATLEGLLSSSSTLKNMEAFKAADDGLNP---VCLAFYTDRGGLAHATNAACDRLFRAPLEMFDDTIQQRTAHDFLSAALIAPSDREAWFHSLIDCLFSAAPRCA------TQIVKAFDGAGEIRLFLVTAKRVEVEGEDGKEGGYGIVHRCEPMPPSRHIT 736 +L+L+ R+DPR +A +YL + ++ E+ K + ++RTW ST+VG+D SWG A +A SP E E + D P ++++ + + + ++ AFKA + P + L T G + TN A D FR M++D + ++T L L++P DR W +I+ + S P A TQI K G I+LFLV A+ + G + EP P S H+T Sbjct: 157 LLELIFDRMDPRPLAGIYLDSIMEVKTWDEKSKAALSTLRTSWFANLIRTWWLHSTVVGADTSWGMAREVALLLNFSPIDFEDTERLHLDYPLSVMRKQSEKFRDFVANGMLQIQQHPAFKALLAEVPPSTAIHLTCNTPNGLMLEVTNDAFDTYFRGADRMYNDIVLRKTMPCILYLGLVSPEDRREWTRFMIEAV-SKGPLNANGEWRKTQIFKLVCTEGNIQLFLVKARFLPSVGTG------SVAITLEPCPRSNHVT 411
BLAST of NO26G01580 vs. NCBI_GenBank
Match: EWM20703.1 (hypothetical protein Naga_101787g1 [Nannochloropsis gaditana]) HSP 1 Score: 97.1 bits (240), Expect = 3.700e-16 Identity = 66/219 (30.14%), Postives = 101/219 (46.12%), Query Frame = 0 Query: 504 MAAMYLQAFGALQEEGKVDRGRVLRVLRTWHTLSTLVGSDVSWGCAAPMARACG------------ISPAAIEGEENVCRDAPARYRKQRAMATLEGLLSSSSTLKNMEAFKAADDGLNPVCLAFYTDRGGLAHATNAACDRLFRAPLEMFDDTIQQRTAHDFLSAALIAPSDREAWFHSLIDCLF-SAAPRCATQIVKAFDGAGEIRLFLVTAKRVEV 710 MA +LQAF + EG +DR +V+++L W +S + +DVS G +A + P R A + ++RA EG S S LK A+ ADDG+ P+ + L TN D+L + + ++++T L A+LI+P DR WF L LF S R +VK FD G++RL+L A +V++ Sbjct: 1 MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEG-KGSQSLLKESVAWMMADDGVVPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYLHEASQVQL 218
BLAST of NO26G01580 vs. NCBI_GenBank
Match: EWM20491.1 (hypothetical protein Naga_100382g3 [Nannochloropsis gaditana]) HSP 1 Score: 93.2 bits (230), Expect = 5.400e-15 Identity = 82/299 (27.42%), Postives = 129/299 (43.14%), Query Frame = 0 Query: 491 MLDLVITRVDPRAMAAMYLQAFGALQEEGKVDRGRVLRVLRTWHTLSTLVGSDVSWGCAAPMARACGISPAAIE--GEENVCRDA-----------------PARYRKQRAMATLE----GLL---------SSSSTLKNMEAFKAADDGLNPVCLAFYTDR--GGLAHATNAACDRLFRAPLEMFDDTIQQRTAHDFLSAALIAPSDREAWFHSLIDCLFS------------AAPR----CATQIVKAFDGAGEIRLFLVTAKRVEVEGEDGKEGGYGIVHRCEPMPPSRHITTRPD 740 +L ++ RVD MA +L AF A+Q GK+ R ++ +LR W LS L G D++ G A +A A + ++ G + V R R +R T+E GLL + ++ LK F+ DDG + L DR + A+N A +F P + + + + FL AA +A SDR+ WF ++ L S PR ++ +K F G +RL+ ++EV +G+E + EP+P SR+IT RP+ Sbjct: 34 LLGTILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAGEDLTLGIGAAIANALKVEAWELQYRGGDTVKRSESWTGDSSLGIIHTPNSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLKASPLFRERDDGYTGL-LLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLEPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPERGRRRDGVPRRERLLYSEFLKIFSRDGHVRLYWARLAQLEVSMREGEEEKMHFLLWMEPVPASRYITDRPE 331
BLAST of NO26G01580 vs. NCBI_GenBank
Match: EWM23477.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 88.2 bits (217), Expect = 1.700e-13 Identity = 80/311 (25.72%), Postives = 131/311 (42.12%), Query Frame = 0 Query: 491 MLDLVITRVDPRAMAAMYLQAFGALQEEGKVDRGRVLRVLRTWHTLSTLVGSDVSWGCAAPMARACGISPAAIE--------------------GEENVCRDAPARYRKQRAMATLE----GLL--------SSSSTLKNMEAFKAADDGLNPVCLAFYTDR--GGLAHATNAACDRLFRAPLEMFDDTIQQRTAHDFLSAALIAPSDREAWFHSLIDCLFS-------------AAPR---CATQIVKAFDGAGEIRLFLVTAKRVEVEGEDGKEGGYGIVHRCEPMPPSRHITTRPD--CHRIFKTFRR 750 +L+ ++ RVD MA +L AF A+Q G V R ++ +LR W LS L G D++ G A +A+A + + G + + +R + ++ GLL + ++ LK F+ DDG + L DR + A+N A +F P + + + + FL AA +A SDR+ WF ++ L S PR ++ +K F G +RL+ ++E +G+E + EP+P SR+IT RP+ H K F+R Sbjct: 190 LLETILERVDRSRMAEEFLDAFHAVQRRGTVHREGMVGMLRHWKKLSDLSGQDLTLGVGAAIAKAFHVEQWELRYRRRNKVFNRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEELMAVEAGAARLKASSLFRERDDGYTGL-LLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLDPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPEGGSSREGVPPRERLLYSEFLKIFSRDGHVRLYWARLAQLEATTREGEEEKLHFLLWMEPVPASRYITDRPEKATHSKTKLFKR 499
BLAST of NO26G01580 vs. NCBI_GenBank
Match: XP_005855698.1 (hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526] >EKU20665.1 hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 85.9 bits (211), Expect = 8.600e-13 Identity = 73/265 (27.55%), Postives = 113/265 (42.64%), Query Frame = 0 Query: 487 LTCPMLDLVITRVDPRAMAAMYLQAFGALQEEGKVDRGRVLRVLRTWHTLSTLVGS--DVSWGCAAPMARACGISPAAIEGEENVCRDAPARYRKQRAMATLEGLLSSSSTLKNMEAFKAADDGLNPV---CLAFYTDRGGLAHATNAACDRLFRAPLEMFDDTIQQRTAHDFLSAALIAPSDREAWFHSLIDCLFSAAPRCATQIVKAFDGAGEIRLFLVTAKRVEVEGEDGKEGGYGIVHRCEPMPPSRHITTRPDCHRIFKT 747 L+ P LD ++ +D RAM +YLQAF L ++G ++R R + +L+ W + G D + G A + A I+ + ++ A + ++R + L K+ FK +DG + CL R N FR P E D +R FL AA + P DR ++F L+ T + KA D ++ LFL + VE+ G + + EP PPSRHI P H + +T Sbjct: 121 LSSPSLDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELGSPSSILDGAVSDAERRRLWMSHANRLGGEGA-KSDAIFKQLNDGSRAIRMECLGGKERR----LVVNDVYLTYFRRPEEFMKDAWARRCLIGFLLAATVVPDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVEL-----SPGEFVSLIMFEPAPPSRHI---PPQHPVART 372
BLAST of NO26G01580 vs. NCBI_GenBank
Match: CBJ25585.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.5 bits (184), Expect = 1.200e-9 Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0 Query: 186 LLGFSHFDTTHEKPVEDNQKGAAKGAVAKSGRRTYRQYMNRRGGFNRALDK 237 L+GF+ FDTT K VEDNQ+G AKGA++K R YRQYMNRRGGFNR LDK Sbjct: 157 LMGFAGFDTTKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLDK 207
BLAST of NO26G01580 vs. NCBI_GenBank
Match: XP_005853812.1 (hypothetical protein NGA_0494000, partial [Nannochloropsis gaditana CCMP526] >EKU22550.1 hypothetical protein NGA_0494000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 73.2 bits (178), Expect = 5.800e-9 Identity = 72/253 (28.46%), Postives = 109/253 (43.08%), Query Frame = 0 Query: 468 RRRRLLDAR----VVADGAFPLPL--TCPMLDLVITRVDPRAMAAMYLQAFGALQEEGKVDRGRVLRVLRTWHTLSTLVGSDVSWGCAAPMARACGISPAAIEGEENVCRDAPARYRKQRAMATLEGLLSSSSTLKNMEAFKAADDGLNPVCLAFY-TDRGGLAHATNAACDRLFRAPLEMFDDTIQQRTAHDFLSAALIAPSDREAWFHSLIDCLF----------------SAAPRCATQIVKAFDGAGEI 698 RRR+ +D V D + L L + P LD V +D +A+A + F + E V + + LR W LS G DV+ G +A G+ EG N DA +A ++GL S L+ E F+ DD + + +Y + G L ATNA + LF + +Q +T L AAL+AP DR W +++ +F + + AT I+KA +G G+I Sbjct: 52 RRRKAMDTNTDVLTVEDDWWILGLLGSKPHLDEVFKHMDTKAIADIMSTGFQEMHREMHVICTKAMAYLRGWKILSRGAGVDVTHGLYQVIASTLGM--VLEEGFRN--EDA------HEHVALVQGL---SKDLQKSEVFRREDDQTRAMYMHYYRPEDGSLVGATNARMEELFGEVVFSVAGQVQLQTEWSLLFAALVAPDDRPMWVRTVLQHMFRSKDGNQDSRTQAEGETVDAKKATCIIKAMNGQGDI 291 The following BLAST results are available for this feature:
BLAST of NO26G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01580 ID=NO26G01580|Name=NO26G01580|organism=Nannochloropsis oceanica|type=gene|length=7913bpback to top protein sequence of NO26G01580.1 >NO26G01580.1-protein ID=NO26G01580.1-protein|Name=NO26G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1102bpback to top Synonyms
Publications
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