NO26G01560, NO26G01560 (gene) Nannochloropsis oceanica

Overview
NameNO26G01560
Unique NameNO26G01560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2321
Alignment locationchr26:505746..508066 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:505746..508066 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019355Cell_cycle_regulator_Mat89Bb
Homology
The following BLAST results are available for this feature:
BLAST of NO26G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01560.2NO26G01560.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO26G01560.1NO26G01560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01560.2NO26G01560.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO26G01560.1NO26G01560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01560 ID=NO26G01560|Name=NO26G01560|organism=Nannochloropsis oceanica|type=gene|length=2321bp
ATAGGAGAAAGGGATACAACAAGCAAGCTTGTTAGAGAAGGAGGGAGGGC
GGGAGCATTTAGACTGGAAGGAATATTTATAAATGTATATATATGTGTGT
GTAGCCTTTTCGAAGTTTTCCTCACTGCCAAGACAAACACCGCCCATCCA
TCCGTGCCTTTCCTCCCTCCCCTTCCTCCCAGGCAAGCACTGATGGCCGT
CGCGATGCGCAAGGCCCAGGCTCTATCCACACACCTGCAGCACACGCAGA
CATTCTCCCTGATGCACGCCAGCGCACCGACCACCCCCCTGATGATGGTC
ATTGTCGACACCGCCACCAACCGCATATCCCACGCTACTAACGCCCCCTA
CGGCGACCATTTTCGCACCTCCAGCGAGATGGTGGCGGACCTGTTCGCGC
ATAAGgtacgatccattcactcgctccccacttctcttttcccttccaac
cccttgtcgtccttcctcttctcatgcggcccgtcgcatcctttgctttt
ctccctccctccctccctcccaccctccctccctccctccctccctccct
ttccagACACTGAACTTTCTCCTTTTCGCAGTTCTTTTGGCCCCGGGCGA
TCGCCAGGACTACTTTAAGGCGTTCATCCACGGTCTGATGGTTCGCAAGG
GGCCTTGCAACTGTGCCTTCTTCGTGAAGGTACGTTCCCCTTCGTCCCTC
CCTTTCCCTTCCTCCTTCCCCTCCCTCTCTGTTTCATCTCTTGATTGTCA
TGTCATGCGGCATTTTCCGTTCACGTGCTCGTCCCTCTCTCTCCTTCCTG
TGTCTCTTTTGCCGCGGCTTCCTCCTTCTCCTCTTCCTCCTCCTTTTCCT
CAGATCTTCAATCGCCGGGGCGAGATCGAGTTGTACATATTAAAATCACG
GAAGTTCCAGgtaagcccctcctccatttcaacaaacctcctctatttcc
ctccttccctcgcttcctccctggtcgacccacaaggaagttgagcaccg
ccttccgttcctcctccctttccacctcatcaacgcccggcacacgcagc
tcgctcttgtgggtctgcactcccctgttttcattccatccctaaatttt
cctccttccctccttttttccctttctcacagGCTGCTGAAGGCTATGGA
ATGGTTCTGCATCTCCACCCTTGCCCTCCTTCGCGCCATATATCGGCCAC
TCCCCACCATCAGATCGTATCGCAACGCTTCCGCCAGCTTCGGGGAAATG
ACTCCGAGAAGTCGAATGGGAGAGAGGGAACAGGAAAGAGTAATTTACAA
GTGGAGGAAGAGGAGAAGGAAGAGGTGCAGGAGGAGCAGGAGGAGCAGGA
GGAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCTGGAGGAGG
TGGAGCAGGAAGAGGAAAGCGGAAAGAAACAGGAGACGGCAGCGTCGAGG
CCTGCAGCAGCAGTAGCAGGTGTATCATTTCCGTTTCTGTCGGTATCGCC
GAAGCTGCGAGGCCTCGTCGCCCTGCCTGTGTCCCCCCTCCCGCTCTCTT
TCCCTCCCCAAAGCGCATCCGGGCAGCCTGGACACCAAGACGGGGGAATA
TTAGAAAACTTTTATCGGCTCTTCTCCGGCCCTGTTTCCCTACCAATCCG
TGAGCCCCCTTTGCCCTCGGCCGGCTGGGAAGAGGACAAGGAAGCGAAAG
AAAAAGACCATCACAAGCAACCGCGCAGAAGAAGCGCAACTACGGCACGT
CCCATCCTTTCTCATAAACCTTCTTCGACACAAGGCCAACGGCGTCATGG
TGTCACCCTACCGTCATCAACATCAACATCAACATCATCAGCAACATCAT
CATCAACATCGGCGGCGGCGAGGGAATCGGCTCATGCACCTAAACCACGG
CTATCACCCTCGATGCTGCCATTCCCTGCCCAGTTTCCACCTTTTTCTCA
ATCATCCCCATCGCTCCTGCCACCGAGGGGTCATCCACCACTCCAAGGAG
GAAGCGACCGATGGGGAGGACGGGAGACGGAGGGCGAGCCAGGGGAAATA
AGAGACATGCCACCTGCCGTTGGGAATTTTGAGCTGGTTGACAGAGAGGC
ACAAGAAGGAATGAGAGGAGGAGGGCAGCCTCTGGTCATGGAGTCTGATC
TGGATTTTCTTATTGACTTTTTTGAGAATGAAAAATGAATGAATGCAGGG
AGAATGGCGAGATAAAGTCAGGGAAGTAGGACTGCAGTGAACAGGGGTGG
GGAAGACGAGGTGTCGGGGTCTACACTGTCCAATAATTGAATGGAATGAA
AATTTGTGTGTCTTAGCGTGA
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protein sequence of NO26G01560.2

>NO26G01560.2-protein ID=NO26G01560.2-protein|Name=NO26G01560.2|organism=Nannochloropsis oceanica|type=polypeptide|length=541bp
MAVAMRKAQALSTHLQHTQTFSLMHASAPTTPLMMVIVDTATNRISHATN
APYGDHFRTSSEMVADLFAHKTLNFLLFAVLLAPGDRQDYFKAFIHGLMV
RKGPCNCAFFVKVRSPSSLPFPSSFPSLSVSSLDCHVMRHFPFTCSSLSL
LPVSLLPRLPPSPLPPPFPQIFNRRGEIELYILKSRKFQAAEGYGMVLHL
HPCPPSRHISATPHHQIVSQRFRQLRGNDSEKSNGREGTGKSNLQVEEEE
KEEVQEEQEEQEEQEEQEEQEEQEELEEVEQEEESGKKQETAASRPAAAV
AGVSFPFLSVSPKLRGLVALPVSPLPLSFPPQSASGQPGHQDGGILENFY
RLFSGPVSLPIREPPLPSAGWEEDKEAKEKDHHKQPRRRSATTARPILSH
KPSSTQGQRRHGVTLPSSTSTSTSSATSSSTSAAARESAHAPKPRLSPSM
LPFPAQFPPFSQSSPSLLPPRGHPPLQGGSDRWGGRETEGEPGEIRDMPP
AVGNFELVDREAQEGMRGGGQPLVMESDLDFLIDFFENEK*
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protein sequence of NO26G01560.1

>NO26G01560.1-protein ID=NO26G01560.1-protein|Name=NO26G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=483bp
MAVAMRKAQALSTHLQHTQTFSLMHASAPTTPLMMVIVDTATNRISHATN
APYGDHFRTSSEMVADLFAHKTLNFLLFAVLLAPGDRQDYFKAFIHGLMV
RKGPCNCAFFVKIFNRRGEIELYILKSRKFQAAEGYGMVLHLHPCPPSRH
ISATPHHQIVSQRFRQLRGNDSEKSNGREGTGKSNLQVEEEEKEEVQEEQ
EEQEEQEEQEEQEEQEELEEVEQEEESGKKQETAASRPAAAVAGVSFPFL
SVSPKLRGLVALPVSPLPLSFPPQSASGQPGHQDGGILENFYRLFSGPVS
LPIREPPLPSAGWEEDKEAKEKDHHKQPRRRSATTARPILSHKPSSTQGQ
RRHGVTLPSSTSTSTSSATSSSTSAAARESAHAPKPRLSPSMLPFPAQFP
PFSQSSPSLLPPRGHPPLQGGSDRWGGRETEGEPGEIRDMPPAVGNFELV
DREAQEGMRGGGQPLVMESDLDFLIDFFENEK*
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Synonyms
Publications