NO26G01530, NO26G01530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01530 vs. NCBI_GenBank
Match: EWM20744.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 90.9 bits (224), Expect = 2.000e-14 Identity = 85/373 (22.79%), Postives = 139/373 (37.27%), Query Frame = 0 Query: 43 CEACHGLKMKCNREFPCSRCWRLALPCKPRELGKKMRRRAKVEGRNGAEGNAEGGLYEGREDGSWGVEECQVQHXXXXXXXXXXXXXXXXXXXXXXXXWQPEAMISSSLMELCFNRHNPRRQAQTYLEVFHQMLGDGVLDRFKTLQVLKYWKTLSLMAGSDVSQ--GMSKIIGKAFDITTHEIDSTSPL---PIRHAQA----APDSLRALTQDLQH---SLSFQREDDGRNAYYMLRFEGQPEGGXXXXXEQATGTFACAGNPAFQKLFRRTEALVGDVVAYQALQSLLYVSAVAHEDRRLFFRCLIGALFSRTNAPRSEIIKAFKKDGGIDLYLMQTRPHEWPDGRLGILLKLEEVPPSRHISCRPNYQKV 404 C C+ K C+R FPC RC+R PC+P + + RR + G + L SS ++L R + YL+ F + +GVL+R + + +LK W L +M D G + AF I E++ L P HA+ A + R L + +H +L ++ ++ A YM R + + + N A FR + D+ + L + L+ + VA EDR +F+ L A S + R+ +K F + G + LYL + + L E PPSRH++ RP+ ++ Sbjct: 118 CRVCYLEKASCDRNFPCGRCFRYNKPCRPATVTQGSRRPVR--------GTSSSSL----------------------------------------------LFQSSPYLDLVIERSDLPAMVPLYLQAFQDLFQEGVLNRKRAIGLLKSWVDLGVMMDGDCDPTFGAFAEVKAAFQINDLELEDPECLAYEPPLHAEKGRLWAARADRVLGEGAKHLEENLVCRQANNSSRAVYMARMDCKDQW--------------VISNKAHNTYFRSPAEFMQDMWKRRCLLAFLFAAGVAPEDRLAYFKLLHFATLSTSLMKRTAFLKIFDRQGRMTLYLSDHQVVKMGPNEYASLCVTEPAPPSRHVTTRPDVTRL 422
BLAST of NO26G01530 vs. NCBI_GenBank
Match: EWM23477.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 89.4 bits (220), Expect = 5.700e-14 Identity = 110/488 (22.54%), Postives = 166/488 (34.02%), Query Frame = 0 Query: 35 GDGSLSMVCEACHGLKMKCNREFPCSRCWRLALPCKPRELGKKMRRRAK---------------------------------------VEGR----------------NGAEGNAEGGLYEG----REDGSWGV----EECQVQHXXXXXXXXXXXXXXXXXXXXXXXXWQPEAMISSSLMELCFNRHNPRRQAQTYLEVFHQMLGDGVLDRFKTLQVLKYWKTLSLMAGSDVSQGMSKIIGKAFDITTHEID------------------STSPLPIRH-AQAAPDSLRALT---------------------QDLQHSLSFQREDDGRNAYYMLRFEGQPEGGXXXXXEQATGTFACAGNPAFQKLFRRTEALVGDVVAYQALQSLLYVSAVAHEDRRLFFRCLIGALFSRTNAPR----------------SEIIKAFKKDGGIDLY-----LMQTRPHEWPDGRLGILLKLEEVPPSRHISCRP 399 G S + C+ C+ K KC+ PC RC+RL LPC+PR G +K EGR +G E EG EG R D +WG+ Q + SL+E R + R A+ +L+ FH + G + R + +L++WK LS ++G D++ G+ I KAF + E+ S P + +Q S R LT L+ S F+ DDG ++ ++ A N A+ +F L+ + +A L L+ + VAH DR +FR + AL S P SE +K F +DG + LY ++ E + +L LL +E VP SR+I+ RP Sbjct: 11 GTSSKNKSCQKCYDSKSKCDFSLPCERCFRLNLPCRPRVRGSMTHSASKRTRGCSKSALGDEATGSPCWPPQESLPRLGGPGKAPRVGQEGRQWAGRDSYTSTEAASEDGEEDEGEGCQPEGSNAYRRDCAWGLLLERARYDFQRSMGTQPSGEESPIKAQPSRASASKEEENDGDGQSLLETILERVDRSRMAEEFLDAFHAVQRRGTVHREGMVGMLRHWKKLSDLSGQDLTLGVGAAIAKAFHVEQWELRYRRRNKVFNRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEELMAVEAGAARLKASSLFRERDDGYTGLLLIE------------VDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLDPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPEGGSSREGVPPRERLLYSEFLKIFSRDGHVRLYWARLAQLEATTREGEEEKLHFLLWMEPVPASRYITDRP 486
BLAST of NO26G01530 vs. NCBI_GenBank
Match: XP_005854767.1 (hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526] >XP_005855415.1 hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >EKU20946.1 hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >EKU21594.1 hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 80.9 bits (198), Expect = 2.000e-11 Identity = 63/252 (25.00%), Postives = 108/252 (42.86%), Query Frame = 0 Query: 151 LMELCFNRHNPRRQAQTYLEVFHQMLGDGVLDRFKTLQVLKYWKTLSLMAGSDVSQGMSKIIGKAFDITTHEIDSTSPLPIRHAQAAPDSLR--------------ALTQDLQHSLSFQREDDGRNA--YYMLRFEGQPEGGXXXXXEQATGTFACAGNPAFQKLFRRTEALVGDVVAYQALQSLLYVSAVAHEDRRLFFRCLIGALFSRTNAPRSEIIKAFKKDGGIDLYLMQTRPHEWPDGRLGILLKLE 387 ++E H+P+ A+ YL+ F ++ G + R L+ LK W+ LS +AG+DV+ G++ + K F+++ E++ P+R Q P +R A TQ L+ + F+RE++G A +L F ++T AC N + L + + + S L A EDRR + ++ +F ++ K + KDG + L L R GI K+E Sbjct: 91 ILEYVLTTHSPKPFAEMYLQAFERLFIAGKIRRDSALRTLKMWEFLSSLAGADVTLGVASHVQKRFNVSAIELEE----PMRMLQDPPSHVRYQRLQQYQSSAASQARTQQLKETEIFKRENEGTRASRASLLMF----------VTNRSTMWAAC--NEFHAARLKEATELWDKALQRKLIWSYLMAPLYAPEDRRTYIDNIVEMIFGHEKLTKTMFFKMYDKDGSVKLCLHTARTIRLGPHTTGITFKIE 326
BLAST of NO26G01530 vs. NCBI_GenBank
Match: XP_005855698.1 (hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526] >EKU20665.1 hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 79.0 bits (193), Expect = 7.700e-11 Identity = 64/260 (24.62%), Postives = 105/260 (40.38%), Query Frame = 0 Query: 146 MISSSLMELCFNRHNPRRQAQTYLEVFHQMLGDGVLDRFKTLQVLKYWKTLSLMAGS--DVSQGMSKIIGKAFDITTHEIDSTSPLPIRHAQAAPDSLRALTQDLQHSLS---------FQREDDGRNAYYMLRFEGQPEGGXXXXXEQATGTFACAGNPAFQKLFRRTEALVGDVVAYQALQSLLYVSAVAHEDRRLFFRCLIGALFSRTNAPRSEIIKAFKKDGGIDLYLMQTRPHEWPDGRLGILLKLEEVPPSRHI 395 ++SS ++ + R YL+ F ++L G+L+R + + +LKYW+ + + G D + G+ + AF I E+ SP I + R L + L F++ +DG A M G+ N + FRR E + D A + L L + V +DR FFR L+ ++ + KA + ++L+L + R E G L+ E PPSRHI Sbjct: 120 LLSSPSLDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELG--SPSSILDGAVSDAERRRLWMSHANRLGGEGAKSDAIFKQLNDGSRAIRMECLGGKER--------------RLVVNDVYLTYFRRPEEFMKDAWARRCLIGFLLAATVVPDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPGEFVSLIMFEPAPPSRHI 363
BLAST of NO26G01530 vs. NCBI_GenBank
Match: EWM20491.1 (hypothetical protein Naga_100382g3 [Nannochloropsis gaditana]) HSP 1 Score: 74.7 bits (182), Expect = 1.400e-9 Identity = 71/310 (22.90%), Postives = 122/310 (39.35%), Query Frame = 0 Query: 150 SLMELCFNRHNPRRQAQTYLEVFHQMLGDGVLDRFKTLQVLKYWKTLSLMAGSDVSQGMSKIIGKAFDITTHEIDSTSPLPIRHAQA-----------APDS-----------------------------LRALTQDLQHSLSFQREDDGRNAYYMLRFEGQPEGGXXXXXEQATGTFACAGNPAFQKLFRRTEALVGDVVAYQALQSLLYVSAVAHEDRRLFFRCLIGALFS----------RTNAPR------SEIIKAFKKDGGIDLY-----LMQTRPHEWPDGRLGILLKLEEVPPSRHISCRP 399 SL+ R + R A+ +L+ FH + G + R + +L++WK LS +AG D++ G+ I A + E+ ++ +++ P+S + A L+ S F+ DDG ++ ++ A N A+ +F L+ + +A L+ L+ + VAH DR +FR + AL S R PR SE +K F +DG + LY ++ E + ++ LL +E VP SR+I+ RP Sbjct: 33 SLLGTILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAGEDLTLGIGAAIANALKVEAWELQYRGGDTVKRSESWTGDSSLGIIHTPNSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLKASPLFRERDDGYTGLLLIE------------VDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLEPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPERGRRRDGVPRRERLLYSEFLKIFSRDGHVRLYWARLAQLEVSMREGEEEKMHFLLWMEPVPASRYITDRP 330
BLAST of NO26G01530 vs. NCBI_GenBank
Match: EWM21361.1 (hypothetical protein Naga_100666g2 [Nannochloropsis gaditana]) HSP 1 Score: 72.0 bits (175), Expect = 9.400e-9 Identity = 58/236 (24.58%), Postives = 106/236 (44.92%), Query Frame = 0 Query: 177 GDGVLDRFKTLQVLKYWKTLSLMAGSDVSQGMSKIIGKAFDITTHEIDSTSPLPIRHAQAAPDSLRALTQDLQHSLSFQREDDGRN-AYYMLRFEGQPEGGXXXXXEQATGTFACAGNPAFQKLFRRTEALVGDVVAYQALQSLLYVSAVAHEDRRLFFRCLIGALFSRTNAPRSE-IIKAFKKDGGIDLYLMQTRPHEWPDGRL-GILLKLEEVPPSRHISCRPNYQKVAQAFRR 410 G +DR + ++ ++ W+ LS++ G DV+ GM+ +G++ I+ +++ + + A S R + ++ + D+ R Y + Q E A N AF ++ ++ ++ LL VA +DR FF I ALF + +S ++K F+ DG I L ++ RP + G L G+ + E P S+ ++ RP+ +V FRR Sbjct: 11 GSEGIDRRRVIECMRIWQHLSILVGGDVTWGMADKVGRSMGISAVDVEDNASV----ALGPTRSRRKGRAQEEVAILVRLVDEVRTMPDYKILARTQHESVPTFLGLLAGERLVQVTNAAFDRMVEGAGRIMSSAFVHRTTCILLLAQLVAPDDRSTFFEGFIQALFVPSRCFKSTFLLKWFQGDGDIRLCIVSFRPVK--VGHLSGVQILFEAAPQSKRLTSRPHRNQVIDTFRR 240
BLAST of NO26G01530 vs. NCBI_GenBank
Match: EWM20703.1 (hypothetical protein Naga_101787g1 [Nannochloropsis gaditana]) HSP 1 Score: 70.9 bits (172), Expect = 2.100e-8 Identity = 60/238 (25.21%), Postives = 105/238 (44.12%), Query Frame = 0 Query: 165 AQTYLEVFHQMLGDGVLDRFKTLQVLKYWKTLSLMAGSDVSQGMSKIIGKAFDITTHEIDSTSP-------------------LPIRHAQAAPDSLRALTQDLQHSLSFQREDDGRNAYYMLRFEGQPEGGXXXXXEQATGTFACAGNPAFQKLFRRTEALVGDVVAYQALQSLLYVSAVAHEDRRLFFRCLIGALF-SRTNAPRSEIIKAFKKDGGIDLYLMQTRPHEWPDGRLGIL 383 AQ +L+ F ++ +G LDR K +Q+L W+ +S++A +DVS G+++ I + + + ++ P L R A + L+ S+++ DDG M+ +G Q T N + KL ++L + + +Q LL S ++ +DR L+FRCL +LF S + ++K F G + LYL HE +LG++ Sbjct: 2 AQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKGSQSLLKESVAWMMADDGVVPLLMMCMDG------PHMLLQTT-------NRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYL-----HEASQVQLGLV 221 The following BLAST results are available for this feature:
BLAST of NO26G01530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01530 ID=NO26G01530|Name=NO26G01530|organism=Nannochloropsis oceanica|type=gene|length=5292bpback to top protein sequence of NO26G01530.1 >NO26G01530.1-protein ID=NO26G01530.1-protein|Name=NO26G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=804bpback to top Synonyms
Publications
|