NO26G01480, NO26G01480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01480 vs. NCBI_GenBank
Match: EFJ38328.1 (hypothetical protein SELMODRAFT_75309 [Selaginella moellendorffii]) HSP 1 Score: 147.9 bits (372), Expect = 8.500e-32 Identity = 87/233 (37.34%), Postives = 121/233 (51.93%), Query Frame = 0 Query: 271 QRIVSSQCKGSLAVHSLHPHTGELTLLSTWCAHSLYSQPIEVWVAVFADEEEEGREGEREGGEVIWSGGDDSCLKGWDLRAGVKRPVWYDSTTHGAGVTCIARQGGKNGGLFATGCYDGVLRLWDVRAMDRRPLCVQECGEVGGGIWRIKWHPTKKGTMAVAGMHGGACVLELXXXXXXXXXXXXXXXXLRKRWGHGKHESMVYGIDWWRGGEGWREDIVASCSFYDRALHLW 504 Q +V S GS+++ S+ G L L +W AH E W A + D +G ++++GGDDS GWDLRA + PV+ D+ +H GV C+ + + ATG YD LRLWDVR M RP + G +GGG+WR+KWHP KGT+ A MH G ++ + + +H+S+ YG+DW + E +VASCSFYD ALHLW Sbjct: 137 QELVVSHSNGSISLVSM--SRGRLELDRSWEAHG-----FEAWTATY-DAWIQG---------LVYTGGDDSQFCGWDLRASLDSPVFRDAKSHEMGVCCV-QSNPLWENVVATGSYDERLRLWDVR-MAHRPFATHKIG-LGGGVWRLKWHPVDKGTLVAACMHSGFAIVAVDEQRDVGVGVVKE---------YKEHKSLAYGVDWSKNNESL--PLVASCSFYDNALHLW 338
BLAST of NO26G01480 vs. NCBI_GenBank
Match: XP_024526821.1 (diphthine methyltransferase [Selaginella moellendorffii]) HSP 1 Score: 147.9 bits (372), Expect = 8.500e-32 Identity = 87/233 (37.34%), Postives = 121/233 (51.93%), Query Frame = 0 Query: 271 QRIVSSQCKGSLAVHSLHPHTGELTLLSTWCAHSLYSQPIEVWVAVFADEEEEGREGEREGGEVIWSGGDDSCLKGWDLRAGVKRPVWYDSTTHGAGVTCIARQGGKNGGLFATGCYDGVLRLWDVRAMDRRPLCVQECGEVGGGIWRIKWHPTKKGTMAVAGMHGGACVLELXXXXXXXXXXXXXXXXLRKRWGHGKHESMVYGIDWWRGGEGWREDIVASCSFYDRALHLW 504 Q +V S GS+++ S+ G L L +W AH E W A + D +G ++++GGDDS GWDLRA + PV+ D+ +H GV C+ + + ATG YD LRLWDVR M RP + G +GGG+WR+KWHP KGT+ A MH G ++ + + +H+S+ YG+DW + E +VASCSFYD ALHLW Sbjct: 136 QELVVSHSNGSISLVSM--SRGRLELDRSWEAHG-----FEAWTATY-DAWIQG---------LVYTGGDDSQFCGWDLRASLDSPVFRDAKSHEMGVCCV-QSNPLWENVVATGSYDERLRLWDVR-MAHRPFATHKIG-LGGGVWRLKWHPVDKGTLVAACMHSGFAIVAVDEQRDVGVGVVKE---------YKEHKSLAYGVDWSKNNESL--PLVASCSFYDNALHLW 337
BLAST of NO26G01480 vs. NCBI_GenBank
Match: XP_016269920.1 (WD repeat protein [Rhodotorula toruloides NP11] >EMS18801.1 WD repeat protein [Rhodotorula toruloides NP11] >CDR49342.1 RHTO0S25e01706g1_1 [Rhodotorula toruloides]) HSP 1 Score: 146.0 bits (367), Expect = 3.200e-31 Identity = 86/211 (40.76%), Postives = 110/211 (52.13%), Query Frame = 0 Query: 298 STWCAHSLYSQPIEVWVAVFADEEEEGREGEREGGEVIWSGGDDSCLKGWDLRAGVKRPVWYDSTTHGAGVTCI-ARQGGKNGGLFATGCYDGVLRLWDVRAMDRRPLCVQECGEVGGGIWRIKWHPTKKGTMAVAGMHGGACVLE---LXXXXXXXXXXXXXXXXLRKRWGHGKHESMVYGIDWWRGGEGW-REDIVASCSFYDRALHLW 504 S+W AH E W+A F E +W+GGDD LKGWDLR G RP + + T GVT I + Q +N LFA G YD +RL+D R+PL + GGGIWR+KWHPT + VAGMHGG V++ L ++ KHES+ YG+DW GG+ +D++ASCSFYD ALHLW Sbjct: 190 SSWHAHD-----FEPWIAAFDCWE----------SSTVWTGGDDLMLKGWDLRQGCDRPTFVNKRTFEGGVTSIQSHQHVEN--LFAVGSYDSRIRLFD----RRKPLVPVTEFDAGGGIWRLKWHPTDPTRLLVAGMHGGFKVVDFDGLALNGGVDADGWLTPGESKQHARFDKHESLAYGVDWSDGGKTEDGKDLIASCSFYDHALHLW 379
BLAST of NO26G01480 vs. NCBI_GenBank
Match: PRQ72756.1 (WD40-repeat-containing domain protein [Rhodotorula toruloides]) HSP 1 Score: 145.2 bits (365), Expect = 5.500e-31 Identity = 88/213 (41.31%), Postives = 110/213 (51.64%), Query Frame = 0 Query: 298 STWCAHSLYSQPIEVWVAVFADEEEEGREGEREGGEVIWSGGDDSCLKGWDLRAGVKRPVWYDSTTHGAGVTCI-ARQGGKNGGLFATGCYDGVLRLWDVRAMDRRPLCVQECGEVGGGIWRIKWHPTKKGTMAVAGMHGGACV-----LELXXXXXXXXXXXXXXXXLRKRWGHGKHESMVYGIDWWRGGEGW-REDIVASCSFYDRALHLW 504 S+W AH E W+A F E +W+GGDD LKGWD+R G RP + + T GVT I + Q +N LFA G YD +RL+D R+PL + GGGIWR+KWHPT + VAGMHGG V L L L R+ KHES+ YG+DW GG+ +D++ASCSFYD ALHLW Sbjct: 248 SSWHAHD-----FEPWIAAFDCWEP----------STVWTGGDDLTLKGWDMRQGCDRPTFVNKRTFEGGVTSIQSHQHVEN--LFAVGSYDSRIRLFD----RRKPLVPLTEFDAGGGIWRLKWHPTDPTRLLVAGMHGGFKVVNFDNLALNGGADADGWLAPGEGKLHARF--DKHESLAYGVDWSDGGKTEDGKDLIASCSFYDHALHLW 437
BLAST of NO26G01480 vs. NCBI_GenBank
Match: EFJ14892.1 (hypothetical protein SELMODRAFT_119414 [Selaginella moellendorffii]) HSP 1 Score: 144.1 bits (362), Expect = 1.200e-30 Identity = 85/234 (36.32%), Postives = 120/234 (51.28%), Query Frame = 0 Query: 271 QRIVSSQCKGSLAVHSLHPHTGELTLLSTWCAHSLYSQPIEVWVAVFADEEEEGREGEREGGEVIWSGGDDSCLKGWDLRAGVKRPVWYDSTTHGAGVTCIARQGGKNGGLFATGCYDGVLRLWDVRAMDRRPLCVQECGEVGGGIWRIKWHPTKKGTMAVAGMHGGACVLELXXXXXXXXXXXXXXXXLRKRWGHGKHESMVYGIDWWRGGEGWREDIVASCSFYDRALHLWE 505 Q +V S GS+++ S+ L L +W AH E W A + D +G ++++GGDDS GWDLRA + PV+ D+ +H GV C+ + + ATG YD LRLWD R M RP + G +GGG+WR+KWHP KGT+ A MH G ++ + + +H+S+ YG+DW + E +VASCSFYD ALHLW+ Sbjct: 137 QELVVSHSNGSISLVSMSRE--RLELDRSWEAHG-----FEAWTATY-DAWIQG---------LVYTGGDDSQFCGWDLRASLDSPVFRDAKSHEMGVCCV-QSNPLWENVVATGSYDERLRLWDAR-MAHRPFATHKIG-LGGGVWRLKWHPVDKGTLVAACMHSGFAIVAVDEQRDVGVGVVKE---------YKEHKSLAYGVDWSKNNESL--PLVASCSFYDNALHLWK 339
BLAST of NO26G01480 vs. NCBI_GenBank
Match: XP_024544954.1 (diphthine methyltransferase [Selaginella moellendorffii]) HSP 1 Score: 144.1 bits (362), Expect = 1.200e-30 Identity = 85/234 (36.32%), Postives = 120/234 (51.28%), Query Frame = 0 Query: 271 QRIVSSQCKGSLAVHSLHPHTGELTLLSTWCAHSLYSQPIEVWVAVFADEEEEGREGEREGGEVIWSGGDDSCLKGWDLRAGVKRPVWYDSTTHGAGVTCIARQGGKNGGLFATGCYDGVLRLWDVRAMDRRPLCVQECGEVGGGIWRIKWHPTKKGTMAVAGMHGGACVLELXXXXXXXXXXXXXXXXLRKRWGHGKHESMVYGIDWWRGGEGWREDIVASCSFYDRALHLWE 505 Q +V S GS+++ S+ L L +W AH E W A + D +G ++++GGDDS GWDLRA + PV+ D+ +H GV C+ + + ATG YD LRLWD R M RP + G +GGG+WR+KWHP KGT+ A MH G ++ + + +H+S+ YG+DW + E +VASCSFYD ALHLW+ Sbjct: 136 QELVVSHSNGSISLVSMSRE--RLELDRSWEAHG-----FEAWTATY-DAWIQG---------LVYTGGDDSQFCGWDLRASLDSPVFRDAKSHEMGVCCV-QSNPLWENVVATGSYDERLRLWDAR-MAHRPFATHKIG-LGGGVWRLKWHPVDKGTLVAACMHSGFAIVAVDEQRDVGVGVVKE---------YKEHKSLAYGVDWSKNNESL--PLVASCSFYDNALHLWK 338
BLAST of NO26G01480 vs. NCBI_GenBank
Match: KWU45479.1 (WD40 repeat-like protein [Rhodotorula sp. JG-1b]) HSP 1 Score: 143.3 bits (360), Expect = 2.100e-30 Identity = 87/214 (40.65%), Postives = 103/214 (48.13%), Query Frame = 0 Query: 298 STWCAHSLYSQPIEVWVAVFADEEEEGREGEREGGEVIWSGGDDSCLKGWDLRAGVKRPVWYDSTTHGAGVTCIARQGGKNGGLFATGCYDGVLRLWDVRAMDRRPLCVQECGEVGGGIWRIKWHPTKKGTMAVAGMHGGACV-----LELXXXXXXXXXXXXXXXXLRKRWGHGKHESMVYGIDWWRGGE-GWREDIVASCSFYDRALHLWEC 506 STW AH E W+A F E +W+GGDD LKGWDLR G RP + + T GVT I + LFA G YD +RL+D R+PL + GGIWR+KWHPT + VAGMHGG V L L L R+ KHES+ YG DW GG D+VASCSFYD LH+W C Sbjct: 191 STWHAHD-----FEPWIAAFDCWEP----------TTVWTGGDDLMLKGWDLRQGCDRPTFVNKRTFEGGVTSIQSHQTRE-NLFAVGSYDSRVRLFD----KRKPLVPLTEYDAEGGIWRLKWHPTDPTRLLVAGMHGGFKVVDFDGLALNSGVDADGWLTPGEGRLHARF--DKHESLAYGADWSVGGRTAQGRDLVASCSFYDHMLHVWSC 382
BLAST of NO26G01480 vs. NCBI_GenBank
Match: POY71471.1 (hypothetical protein BMF94_5784 [Rhodotorula taiwanensis]) HSP 1 Score: 140.6 bits (353), Expect = 1.400e-29 Identity = 89/232 (38.36%), Postives = 111/232 (47.84%), Query Frame = 0 Query: 291 TGELTLL---------STWCAHSLYSQPIEVWVAVFADEEEEGREGEREGGEVIWSGGDDSCLKGWDLRAGVKRPVWYDSTTHGAGVTCIARQGGKNGGLFATGCYDGVLRLWDVRAMDRRPLCVQECGEVGGGIWRIKWHPTKKGTMAVAGMHGGACVLELXXXXXXXXXXXXXXXXLRKRWGHGK-------HESMVYGIDWWRGGE-GWREDIVASCSFYDRALHLWEC 506 +GE+ LL + W AH E W+A F E +W+GGDD LKGWDLR G RP + + T GVT I + + LFA G YD +RL+D R+PL + GGG WR+KWHPT + +AGMHGG V++ R G GK HES+ YG DW GG +DIVASCSFYD ALH+W C Sbjct: 175 SGEICLLEGENAFEVTTRWHAHD-----FEPWIAAFDCWEP----------TTVWTGGDDLTLKGWDLRQGCDRPTFVNKRTFEGGVTSI-QSHIERENLFAVGSYDSRVRLFD----KRKPLTPLTEFDAGGGNWRLKWHPTDPSRLLIAGMHGGFKVVDFDGLALNGGVDSDGWL----RPGEGKLHARFDGHESLAYGADWSDGGRTDDGKDIVASCSFYDHALHVWAC 382
BLAST of NO26G01480 vs. NCBI_GenBank
Match: XP_002503385.1 (predicted protein [Micromonas commoda] >ACO64643.1 predicted protein [Micromonas commoda]) HSP 1 Score: 139.4 bits (350), Expect = 3.000e-29 Identity = 86/226 (38.05%), Postives = 111/226 (49.12%), Query Frame = 0 Query: 301 CAHSLYSQPIEVWVAVFADEEEEGREGEREGGEVIWSGGDDSCLKGWDLRAGVKR--PVWYDSTTHGAGVTCIARQGGKNGGLFATGCYDGVLRLWDVRAMDRRPLCVQECGEVGGGIWRIKWHPTKKGTMAVAGMHGGACVL-----------ELXXXXXXXXXXXXXXXXLRKRWGHGK---------HESMVYGIDW-WRGGEGWREDIVASCSFYDRALHLW 504 CAH L E W FA G GG I++G DD+ KGWDLRAG+ R P + +S THGAGVTC+A + + ATG YD +RLWD R + RRP + + GGG WR++WHP ++ MA A M GG ++ E+ W G H S+ YG DW W+ G G ED+V SCSFYD+ LH+W Sbjct: 215 CAHDL-----EAWAVAFA--HPRSSLGSNGGGGFIFTGADDAAFKGWDLRAGLDRSPPAFVNSRTHGAGVTCVA-PSPHDPHVVATGSYDDKVRLWDCRCI-RRPTETCDGVDCGGGTWRLRWHPERR-AMACAAMGGGVAIVDWSGRESRSIDEIDEANKAEAEAGGVESESGGVWEPGSLSVAFRYEGHGSIAYGADWGWKRG-GAPEDVVVSCSFYDKGLHVW 429
BLAST of NO26G01480 vs. NCBI_GenBank
Match: POM66807.1 (Wd-40 repeat-containing protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 138.7 bits (348), Expect = 5.100e-29 Identity = 83/245 (33.88%), Postives = 118/245 (48.16%), Query Frame = 0 Query: 263 HRLQNQHWQRIVSSQCKGSLAVHSLHPHTGELTLLSTWCAHSLYSQPIEVWVAVFADEEEEGREGEREGGEVIWSGGDDSCLKGWDLRAGVKRPVWYDSTTHGAGVTCIARQGGKNGGLFATGCYDGVLRLWDVRAMDRRPLCVQECGEVGGGIWRIKWHP--TKKGTMAVAGMHGGACVLELXXXXXXXXXXXXXXXXLRKRWGHGKHESMVYGIDWWRGGEGW--REDIVASCSFYDRALHLW 504 +R+ + I S G+L+V + P + + W AH LY PIE W+A F + V++SG DD+ LKGWDLR G P + ++ + GV C + + L A G YD + +WD R M + PL V E GGG+WR+KWHP +K + A MH G VLEL L K + +H+S+ YG+DWW G + ++ S SFYD H+W Sbjct: 140 NRVHSNTHPSICVSHSDGALSVWDITPQ--RIVQQAKWRAHDLYGSPIEAWIAAFNCHDP----------NVLFSGADDATLKGWDLRVGTTTPTFKNARQYSMGV-CSIQFHPHDDRLVAIGSYDEQVAVWDHRNM-KNPLAVY---EAGGGVWRLKWHPAENRKELLLAACMHNGFHVLEL-----------ESETKLCKAANYDRHDSLAYGVDWWLHPIGLQAKAPVIGSASFYDHVFHVW 356 The following BLAST results are available for this feature:
BLAST of NO26G01480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01480 ID=NO26G01480|Name=NO26G01480|organism=Nannochloropsis oceanica|type=gene|length=1810bpback to top protein sequence of NO26G01480.1 >NO26G01480.1-protein ID=NO26G01480.1-protein|Name=NO26G01480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=506bpback to top Synonyms
Publications
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