NO26G01410, NO26G01410 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01410 vs. NCBI_GenBank
Match: XP_009830926.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV79990.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 268.9 bits (686), Expect = 1.500e-68 Identity = 126/205 (61.46%), Postives = 159/205 (77.56%), Query Frame = 0
Query: 1 MAEFGELVLVLGDMHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLISREQLDELKSLAPNVHVVRGDMDDPFCSSSSSFLPSTSSTFPETKVVTIGELRVGLCHGHQVLPWGDEGALSMLARELDVDVLITGHTHIHQVSERGGKWFLNPGSISGAYSSFEGGNEGREVIPSFILLAVQGKKVMCYVYEEKEPGEVEVSKVEFVK 206
MA+FGELVLVLGDMHIPHRA IPEKFK+MLVPNKMQHVLCTGN++++EQ DEL+ LAPNVH+VRGD D+ SS +P+ KV+TIG+ R+GLCHGHQ++PWGD L+ L R+L+VD+LITGHTH + + + GKWF+NPGSI+GAYS+ ++V+PSFIL+A+QG KV+ YVYE K+ V VSK EFVK
Sbjct: 1 MADFGELVLVLGDMHIPHRAVDIPEKFKKMLVPNKMQHVLCTGNMVTKEQYDELRGLAPNVHIVRGDFDE-------------SSNYPDKKVITIGQFRIGLCHGHQIVPWGDVDCLAALQRKLNVDILITGHTHQYNLHVQHGKWFVNPGSITGAYSTCT-----QDVVPSFILMAIQGPKVVAYVYELKDGDNVVVSKTEFVK 187
BLAST of NO26G01410 vs. NCBI_GenBank
Match: XP_005854083.1 (vacuolar protein sorting-associated protein 29, partial [Nannochloropsis gaditana CCMP526] >EKU22277.1 vacuolar protein sorting-associated protein 29, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 268.5 bits (685), Expect = 1.900e-68 Identity = 133/159 (83.65%), Postives = 144/159 (90.57%), Query Frame = 0
Query: 1 MAEFGELVLVLGDMHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLISREQLDELKSLAPNVHVVRGDMDDPFCSSSSSFLPSTSSTFPETKVVTIGELRVGLCHGHQVLPWGDEGALSMLARELDVDVLITGHTHIHQVSERGGKWFLNPGSISGAYSS 160
MAEFGELVLVLGD+HIPHRAAAIPEKFKRMLVPNKMQHVLCTGNL+S EQL+ELK+LAPNVHVVRGDMD+ C SS LP+ S+ FP+TKVVTIGELR+GLCHGHQVLPWG+ AL LARELDVDVLITGHTH QVSERGG+WFLNPGSISGAYSS
Sbjct: 1 MAEFGELVLVLGDLHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEA-CPSS---LPA-SAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGRWFLNPGSISGAYSS 154
BLAST of NO26G01410 vs. NCBI_GenBank
Match: XP_008876507.1 (hypothetical protein H310_11562 [Aphanomyces invadans] >ETV94916.1 hypothetical protein H310_11562 [Aphanomyces invadans]) HSP 1 Score: 264.6 bits (675), Expect = 2.700e-67 Identity = 128/205 (62.44%), Postives = 155/205 (75.61%), Query Frame = 0
Query: 1 MAEFGELVLVLGDMHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLISREQLDELKSLAPNVHVVRGDMDDPFCSSSSSFLPSTSSTFPETKVVTIGELRVGLCHGHQVLPWGDEGALSMLARELDVDVLITGHTHIHQVSERGGKWFLNPGSISGAYSSFEGGNEGREVIPSFILLAVQGKKVMCYVYEEKEPGEVEVSKVEFVK 206
MA+FGELVLVLGDMHIPHRA IPEKFK+MLVPNKMQHVLCTGNL+++EQ DEL+ LAPNVH+VRGD D+ S +P+ KVVTIG+ R+GLCHGHQ++PWGD L L R+L+VD+LITGHTH +++ GKWF+NPGSI+GAYS N +V+PSFIL+A+QG KV+ YVYE K V VSK EFVK
Sbjct: 1 MADFGELVLVLGDMHIPHRAVDIPEKFKKMLVPNKMQHVLCTGNLVTKEQFDELRDLAPNVHIVRGDFDE-------------GSHYPDKKVVTIGQFRIGLCHGHQIVPWGDVDCLGALQRKLNVDILITGHTHEYKLLVHHGKWFINPGSITGAYS-----NCTPDVVPSFILMAIQGPKVVAYVYELKGGDTVVVSKSEFVK 187
BLAST of NO26G01410 vs. NCBI_GenBank
Match: XP_009830925.1 (hypothetical protein H257_07184 [Aphanomyces astaci] >ETV79989.1 hypothetical protein H257_07184 [Aphanomyces astaci]) HSP 1 Score: 263.8 bits (673), Expect = 4.700e-67 Identity = 128/220 (58.18%), Postives = 162/220 (73.64%), Query Frame = 0
Query: 1 MAEFGELVLVLGDMHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLISREQLDELKSLAPNVHVVRGDMDDPFCSSSSSFLPSTSSTFPETKVVTIGELRVGLCHGHQVLPWGDEGALSMLARELDVDVLITGHTHIHQVSERGGKWFLNPGSISGAYSS--------------FEGGNEG-REVIPSFILLAVQGKKVMCYVYEEKEPGEVEVSKVEFVK 206
MA+FGELVLVLGDMHIPHRA IPEKFK+MLVPNKMQHVLCTGN++++EQ DEL+ LAPNVH+VRGD D+ SS +P+ KV+TIG+ R+GLCHGHQ++PWGD L+ L R+L+VD+LITGHTH + + + GKWF+NPGSI+GAYS+ ++G R+V+PSFIL+A+QG KV+ YVYE K+ V VSK EFVK
Sbjct: 1 MADFGELVLVLGDMHIPHRAVDIPEKFKKMLVPNKMQHVLCTGNMVTKEQYDELRGLAPNVHIVRGDFDE-------------SSNYPDKKVITIGQFRIGLCHGHQIVPWGDVDCLAALQRKLNVDILITGHTHQYNLHVQHGKWFVNPGSITGAYSTCTQYVQPTLHLPQICHVHHDGRRDVVPSFILMAIQGPKVVAYVYELKDGDNVVVSKTEFVK 207
BLAST of NO26G01410 vs. NCBI_GenBank
Match: CBJ48594.1 (similar to Vacuolar protein sorting 29 (Vesicle protein sorting 29) [Ectocarpus siliculosus]) HSP 1 Score: 262.3 bits (669), Expect = 1.400e-66 Identity = 129/207 (62.32%), Postives = 158/207 (76.33%), Query Frame = 0
Query: 3 EFGELVLVLGDMHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLISREQLDELKSLAPNVHVVRGDMDDPFCSSSSSFLPSTSSTFPETKVVTIGELRVGLCHGHQVLPWGDEGALSMLARELDVDVLITGHTHIHQVSERGGKWFLNPGSISGAYSSFEGGNEGREVIPSFILLAVQGKKVMCYVYEEKEPGEVEVSKVEFVKGQPA 210
+FGELVLVLGDMHIPHR AAIPEKFK+MLVPNKMQHVLCTGNL+ ++Q ++L++LAPNVHVVRGD ++ S+TFPETKVV IG+ RVGL HGHQ++PWGD AL+M R+L D+LI+GHTH +QV+E GG+WF+NPGSI+GAYS+ E + +PSFILLAVQG K + YVY E +VEVSK EF K A
Sbjct: 4 DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEE-------------STTFPETKVVQIGQFRVGLTHGHQIVPWGDPNALAMTQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSAVES-----DAVPSFILLAVQGAKCVTYVY-ELHGDQVEVSKSEFSKASSA 191
BLAST of NO26G01410 vs. NCBI_GenBank
Match: OQR96672.1 (vacuolar protein sorting-associated protein 29-like [Thraustotheca clavata]) HSP 1 Score: 260.0 bits (663), Expect = 6.700e-66 Identity = 124/204 (60.78%), Postives = 158/204 (77.45%), Query Frame = 0
Query: 2 AEFGELVLVLGDMHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLISREQLDELKSLAPNVHVVRGDMDDPFCSSSSSFLPSTSSTFPETKVVTIGELRVGLCHGHQVLPWGDEGALSMLARELDVDVLITGHTHIHQVSERGGKWFLNPGSISGAYSSFEGGNEGREVIPSFILLAVQGKKVMCYVYEEKEPGEVEVSKVEFVK 206
A+FGELVLV+GD+HIPHRA IPEKFK+MLVPNKMQHV+CTGNL+++EQ DEL+ LAPNVHVVRGD D+ S+TFP+ KV+TIG+ R+G+CHGHQ++PWGD +L+ L R+L+VD+LITGHTH +++ + GKWF+NPGSI+GAYS+F +VIPSFIL+AVQ KV+ YVYE K V VSK E+ K
Sbjct: 3 ADFGELVLVVGDLHIPHRALDIPEKFKKMLVPNKMQHVVCTGNLVTKEQFDELRDLAPNVHVVRGDFDE-----------VESTTFPDKKVITIGQFRIGICHGHQIVPWGDVDSLAALQRKLNVDILITGHTHEYKLHTQNGKWFVNPGSITGAYSNFT-----PDVIPSFILMAVQANKVVAYVYELKN-DNVVVSKSEYTK 189
BLAST of NO26G01410 vs. NCBI_GenBank
Match: OQR87731.1 (membrane coat complex retromer, subunit VPS29/PEP11 [Achlya hypogyna]) HSP 1 Score: 258.1 bits (658), Expect = 2.600e-65 Identity = 121/204 (59.31%), Postives = 157/204 (76.96%), Query Frame = 0
Query: 2 AEFGELVLVLGDMHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLISREQLDELKSLAPNVHVVRGDMDDPFCSSSSSFLPSTSSTFPETKVVTIGELRVGLCHGHQVLPWGDEGALSMLARELDVDVLITGHTHIHQVSERGGKWFLNPGSISGAYSSFEGGNEGREVIPSFILLAVQGKKVMCYVYEEKEPGEVEVSKVEFVK 206
A+FGELVL++GD HIPHRA +PEKFK+MLVPNKMQHVLCTGNL+++EQ DEL+ LAPNVHVVRGD D+ ++ FP+ KV+TIG+ R+GLCHGHQ++PWGD +L+ L R+++VD+L+TGHTH +++ + GKWF+NPGSI+GAYS+F EV+PSFIL+A+QG KV+ YVYE K V VSK EF K
Sbjct: 3 ADFGELVLIVGDYHIPHRAMDVPEKFKKMLVPNKMQHVLCTGNLVTKEQFDELRDLAPNVHVVRGDFDE-------------NTNFPDKKVITIGQYRIGLCHGHQIVPWGDADSLAALQRKMNVDILVTGHTHQYKLHTQNGKWFVNPGSITGAYSNFLA-----EVVPSFILMAIQGNKVVAYVYELK-GDNVVVSKSEFSK 187
BLAST of NO26G01410 vs. NCBI_GenBank
Match: XP_012202353.1 (hypothetical protein SPRG_07685 [Saprolegnia parasitica CBS 223.65] >KDO26972.1 hypothetical protein SPRG_07685 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 256.1 bits (653), Expect = 9.700e-65 Identity = 122/204 (59.80%), Postives = 156/204 (76.47%), Query Frame = 0
Query: 2 AEFGELVLVLGDMHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLISREQLDELKSLAPNVHVVRGDMDDPFCSSSSSFLPSTSSTFPETKVVTIGELRVGLCHGHQVLPWGDEGALSMLARELDVDVLITGHTHIHQVSERGGKWFLNPGSISGAYSSFEGGNEGREVIPSFILLAVQGKKVMCYVYEEKEPGEVEVSKVEFVK 206
A+FGELVL++GD HIPHRA IPEKFK+MLVPNKMQHVLCTGNL+++E DEL+ LAPNVHVVRGD D+ ++TFP+ KVVTIG+ R+GLCHGHQ++PWGD +L+ L R+++VD+L+TGHTH +++ + GKWF+NPGSI+GAY GN +V+PSFIL+A+QG KV+ YVYE K V VSK EF K
Sbjct: 3 ADFGELVLIVGDYHIPHRAMDIPEKFKKMLVPNKMQHVLCTGNLVTKETFDELRELAPNVHVVRGDFDE-------------NATFPDKKVVTIGQYRIGLCHGHQIVPWGDVDSLAALQRKMNVDILVTGHTHQYKLHAQNGKWFVNPGSITGAY-----GNFTPDVVPSFILMAIQGNKVVAYVYELK-GDNVVVSKSEFSK 187
BLAST of NO26G01410 vs. NCBI_GenBank
Match: XP_008619955.1 (hypothetical protein SDRG_15557 [Saprolegnia diclina VS20] >EQC26617.1 hypothetical protein SDRG_15557 [Saprolegnia diclina VS20]) HSP 1 Score: 255.8 bits (652), Expect = 1.300e-64 Identity = 121/204 (59.31%), Postives = 156/204 (76.47%), Query Frame = 0
Query: 2 AEFGELVLVLGDMHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLISREQLDELKSLAPNVHVVRGDMDDPFCSSSSSFLPSTSSTFPETKVVTIGELRVGLCHGHQVLPWGDEGALSMLARELDVDVLITGHTHIHQVSERGGKWFLNPGSISGAYSSFEGGNEGREVIPSFILLAVQGKKVMCYVYEEKEPGEVEVSKVEFVK 206
A+FGELVL++GD HIPHRA IPEKFK+MLVPNKMQHVLCTGNL+++E DEL+ LAPNVHVVRGD D+ ++TFP+ KV+TIG+ R+GLCHGHQ++PWGD +L+ L R+++VD+L+TGHTH +++ + GKWF+NPGSI+GAY GN +V+PSFIL+A+QG KV+ YVYE K V VSK EF K
Sbjct: 3 ADFGELVLIVGDYHIPHRAMDIPEKFKKMLVPNKMQHVLCTGNLVTKETFDELRELAPNVHVVRGDFDE-------------NTTFPDKKVITIGQYRIGLCHGHQIVPWGDVDSLAALQRKMNVDILVTGHTHQYKLHAQNGKWFVNPGSITGAY-----GNFTPDVVPSFILMAIQGNKVVAYVYELK-GDNVVVSKSEFSK 187
BLAST of NO26G01410 vs. NCBI_GenBank
Match: GAY02378.1 (Hypothetical protein PINS_010187 [Pythium insidiosum]) HSP 1 Score: 245.7 bits (626), Expect = 1.300e-61 Identity = 116/202 (57.43%), Postives = 150/202 (74.26%), Query Frame = 0
Query: 4 FGELVLVLGDMHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLISREQLDELKSLAPNVHVVRGDMDDPFCSSSSSFLPSTSSTFPETKVVTIGELRVGLCHGHQVLPWGDEGALSMLARELDVDVLITGHTHIHQVSERGGKWFLNPGSISGAYSSFEGGNEGREVIPSFILLAVQGKKVMCYVYEEKEPGEVEVSKVEFVK 206
FGELVLVLGD ++PHRAA IPEKF++MLVPNK+QH+LCTGNL+S+EQ ++L++LAPNVHVVRGD D +TFP+ KVV IG+ R+GLCHGHQ++PWGD+ +LS L R+++V +LITGHTH + + GKWF+NPGSI+GA+S+ V PSFIL+A+QG KV+ +VYE K V VSK EF K
Sbjct: 5 FGELVLVLGDSYVPHRAAEIPEKFQKMLVPNKIQHILCTGNLVSKEQYEDLRALAPNVHVVRGDSD-------------LETTFPDRKVVAIGQFRIGLCHGHQIVPWGDQASLSALQRKMNVXILITGHTHEYHIRTENGKWFVNPGSITGAFSATTNA-----VTPSFILMAIQGPKVVAFVYELKGGENVVVSKSEFTK 188 The following BLAST results are available for this feature:
BLAST of NO26G01410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01410 ID=NO26G01410|Name=NO26G01410|organism=Nannochloropsis oceanica|type=gene|length=804bpback to top protein sequence of NO26G01410.1 >NO26G01410.1-protein ID=NO26G01410.1-protein|Name=NO26G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=223bpback to top Synonyms
Publications
|