NO26G01390, NO26G01390 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01390 vs. NCBI_GenBank
Match: EWM23176.1 (apurinic endonuclease-redox protein [Nannochloropsis gaditana]) HSP 1 Score: 465.3 bits (1196), Expect = 3.100e-127 Identity = 229/302 (75.83%), Postives = 252/302 (83.44%), Query Frame = 0
Query: 334 LLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFHGNWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQ--ATVGLSDHAPVGVLLEV 634
LLSWNVAGLRGLLKKG+ +AFRSLLL E+PD+LCLQETKLQE+HVAEV+AALR LHLP F GNWHCSTAKKGYSGTS+L+SE AGL++GPG V CGMEG VI++D GAF+LVNVYTPNSGEGL+RL FRT +WDRAFE+HL LQ G +G RAVLCCGDLNVA DADFYNPGE RMAKAAGTTPEERASFGRLLEGAGMVD+FR YHP+ TGCYSYWSMRAGNRP+NRGMRLDYFLAS+NM+RG EG GVPR+LDSFILDQ A LSDHAPVGVLLEV
Sbjct: 274 LLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLPTFEGNWHCSTAKKGYSGTSVLVSESAGLAVGPGGVTCGMEGXXXXXXXXXVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAG---------DGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEG-GGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 565
BLAST of NO26G01390 vs. NCBI_GenBank
Match: XP_002501276.1 (predicted protein [Micromonas commoda] >ACO62534.1 predicted protein [Micromonas commoda]) HSP 1 Score: 238.8 bits (608), Expect = 4.700e-59 Identity = 137/304 (45.07%), Postives = 177/304 (58.22%), Query Frame = 0
Query: 332 FRLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFHG-NWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEVE 635
F+ +SWNVAGLR LL K T+ R + E PD++C+QE KLQ+ HV + L + LP + + STAKKGYSG ++ G G +CG EGRV+T++F AF++V Y PNSG+ L+RLE+R WD F +L L GE G+ V+ GDLNV D D YN P K G TPEER+S+ R LE +VDTFR +HP A G YSYWS RAGN+P NRG+RLDYF AS +M +G G RV+DSF+LD+ SDHAPVG+ L ++
Sbjct: 79 FKAISWNVAGLRALLDKNSHTL---RRIADVESPDVICVQEHKLQDVHVNDAVRRLGEI-LPEYRTVKFAVSTAKKGYSGLLSVVE-------GMGDFRCGY------TDEGRVLTLEFDAFTMVFTYVPNSGQKLERLEYRLKKWDVDFRAYLAHLD--GE--------TRGKPVIVGGDLNVGHLDEDIYNVDAPHTKKQCGLTPEERSSWTRTLESVKLVDTFRAFHPNARGWYSYWSGRAGNKPRNRGLRLDYFAASERIMSSGRDG--GGVRVVDSFVLDKLVAEASDHAPVGITLALD 353
BLAST of NO26G01390 vs. NCBI_GenBank
Match: PRW45261.1 (apurinic endonuclease-redox [Chlorella sorokiniana]) HSP 1 Score: 237.3 bits (604), Expect = 1.400e-58 Identity = 144/311 (46.30%), Postives = 183/311 (58.84%), Query Frame = 0
Query: 333 RLLSWNVAGLRGLLKKG--------DATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFHGNWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFG-RLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEVE 635
R+LSWNVAGLR LLKK + + + +L+ EK D+LCLQE KLQ DH V L L LPG+H W+CS KKGYSGT+IL + P V CG+ G+ D +GEGRV+T +F F LVN Y PNSGEGLKRL++R WD+ F +L LQ+ + V+ GDLNVA D D +NP K+AG TPEERASF LL G G+VDTFR HPEA G Y+YWS R R NRG RLD+FL S+ + RV D ++L +G SDH P+G++L+++
Sbjct: 14 RILSWNVAGLRALLKKVKEAQEGRLEQNVPSLPALVEAEKADVLCLQEIKLQADHCEGV---LAELGLPGWHVTWNCSKDKKGYSGTAILSKD------SPLSVSCGI-GDPDHDGEGRVVTAEFDQFFLVNTYVPNSGEGLKRLDYRVQQWDKEFAAYLQGLQQ-------------RKPVVLTGDLNVAPTDIDIHNP--KGNLKSAGFTPEERASFADNLLAGCGLVDTFRAQHPEAVG-YTYWSYRFNARANNRGWRLDHFLVSQALHE----------RVHDCYLL-PGVMG-SDHCPLGLVLKMD 286
BLAST of NO26G01390 vs. NCBI_GenBank
Match: OUS43864.1 (ARP protein, partial [Ostreococcus tauri]) HSP 1 Score: 230.3 bits (586), Expect = 1.700e-56 Identity = 133/325 (40.92%), Postives = 188/325 (57.85%), Query Frame = 0
Query: 331 LFRLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFH-GNWHCSTAKKGYSGT-----------SILISEQAGLSLGPGRVKCGMEGEEDGEG---------EGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEVE 635
+F+ +SWNVAGLR ++K A + R+L+ E+PD++ LQE KLQ H+ + L+ L PG+ + STAKKGYSG + I G + P V G + EG EGR +TI++ F +V+ Y PNSG+ LKRL++R W+R + HL L + + V+ GDLNVA DAD +N + K+AGTTP+ER +FG +LE G+ D+FRF+H +A G +SYWS+RAGNRPFN+G+RLDY +AS+ + G G + V+D+FILDQ T SDHAPVG+ L ++
Sbjct: 159 IFKAISWNVAGLRSFVEKSGAKL---RALVEEERPDVIILQEHKLQMSHIDAFGSKLKEL-CPGYDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPA-VSDGFKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKAL-------------DAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVE----VVDAFILDQVTG--SDHAPVGITLAIK 459
BLAST of NO26G01390 vs. NCBI_GenBank
Match: XP_022838498.1 (Exodeoxyribonuclease III xth [Ostreococcus tauri] >CEF97122.1 Exodeoxyribonuclease III xth [Ostreococcus tauri]) HSP 1 Score: 229.6 bits (584), Expect = 2.800e-56 Identity = 133/324 (41.05%), Postives = 187/324 (57.72%), Query Frame = 0
Query: 332 FRLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFH-GNWHCSTAKKGYSGT-----------SILISEQAGLSLGPGRVKCGMEGEEDGEG---------EGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEVE 635
F+ +SWNVAGLR ++K A + R+L+ E+PD++ LQE KLQ H+ + L+ L PG+ + STAKKGYSG + I G + P V G + EG EGR +TI++ F +V+ Y PNSG+ LKRL++R W+R + HL L + + V+ GDLNVA DAD +N + K+AGTTP+ER +FG +LE G+ D+FRF+H +A G +SYWS+RAGNRPFN+G+RLDY +AS+ + G G + V+D+FILDQ T SDHAPVG+ L ++
Sbjct: 51 FKAISWNVAGLRSFVEKSGAKL---RALVEEERPDVIILQEHKLQMSHIDAFGSKLKEL-CPGYDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPA-VSDGFKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKAL-------------DAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVE----VVDAFILDQVTG--SDHAPVGITLAIK 350
BLAST of NO26G01390 vs. NCBI_GenBank
Match: GBG28833.1 (DNA-apurinic or apyrimidinic site lyase [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 228.8 bits (582), Expect = 4.800e-56 Identity = 123/295 (41.69%), Postives = 165/295 (55.93%), Query Frame = 0
Query: 330 RLFRLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFHGNWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGME---GEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGL 622
+LF++LSWNV GLR + +K A + +L EKP I+CLQETK+QE HV + LPG+ W CST KKGY+GT++ +++ G KC + G + EGEGR IT +LV++Y PN+G+ LKRLE+RT WD +L L+ E G + CGDLNVA D D +NP + K AG+TPEERASF L VD FR+ H +A G ++YWSMR RPFNRG RLDYF R + R+ D+++L + TVG+
Sbjct: 150 KLFKVLSWNVNGLRAMARKQPAML---ATLAQEEKPQIVCLQETKIQESHVGDFEKL-----LPGYTSFWSCSTVKKGYAGTALFVAD--------GYEKCEVSYGIGMDKHEGEGRAITARLPFCNLVSLYVPNAGQDLKRLEYRTKEWDLDLRSYLRDLE-----------AETGLPCIVCGDLNVAHRDLDVWNPDAKHVPKTAGSTPEERASFTEFLHEMEYVDAFRYLHGDAKGHFTYWSMRTNGRPFNRGNRLDYFCMPRRVAEAAATDADTPVRLHDTYVLHEPTVGV 417
BLAST of NO26G01390 vs. NCBI_GenBank
Match: XP_005848578.1 (hypothetical protein CHLNCDRAFT_30910 [Chlorella variabilis] >EFN56476.1 hypothetical protein CHLNCDRAFT_30910 [Chlorella variabilis]) HSP 1 Score: 222.6 bits (566), Expect = 3.500e-54 Identity = 142/308 (46.10%), Postives = 181/308 (58.77%), Query Frame = 0
Query: 334 LLSWNVAGLRGLLKK--------GDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLP-GFHGNWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLE 633
+LSWNVAGLR LLKK + I +L E+ D+LCLQE KLQEDH EV L+ L+LP G+H +W+CS KKGYSGT+I +S QA LS V CG+ G E+ +GEGRVIT +F AF LVN YTPNSGEGLKRL +R WD+ F +L RL E + V+ GDLNVA + D ++P K+AG TP+ERASF L G G VD FR +PEA Y+YW R R N+G RLD+FL S+ + + D + L A +G SDH P+G++L+
Sbjct: 101 ILSWNVAGLRALLKKVKEVEAGTRNENIPTLVALAEAEQADVLCLQEIKLQEDHCVEV---LKELNLPEGWHVSWNCSRDKKGYSGTAI-VSRQAPLS-----VSCGI-GAEEHDGEGRVITAEFSAFYLVNCYTPNSGEGLKRLGYRVEKWDKDFSAYLKRL-------------EQHKPVVVTGDLNVAPAEIDIHSP--KTNLKSAGFTPQERASFAANLLGQGFVDCFRTQYPEAV-AYTYWGYRFNARGNNKGWRLDHFLVSQQLHSS----------LHDCYHL-PAIMG-SDHCPLGLVLK 370
BLAST of NO26G01390 vs. NCBI_GenBank
Match: XP_001416660.1 (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >ABO94953.1 predicted protein, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 216.9 bits (551), Expect = 1.900e-52 Identity = 128/296 (43.24%), Postives = 171/296 (57.77%), Query Frame = 0
Query: 336 SWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFHGNWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLL 632
+WNVAGLR +K ++D R ++ E PD++ LQE KLQE H A + LR + S AKKGYSG ++ G L R G G D EGR +T++F F LV Y PNSG+ LKRL++R W+R HL L + + V+ GDLNVA D+D +N G + K+AGTTP+ER +FG +LE + D FR +H +A G +SYWS+RAGNRPFN+G+RLDY LAS+ + G +G + V+D+FILD+ V SDHAPVGV L
Sbjct: 1 AWNVAGLRSFHEK---SLDRLRGVIAGEAPDVVILQEHKLQETHCAAFTERLRRDFPMYKTVQFAVSVAKKGYSG----VATYDGPKLLEIREGLGARGYTD---EGRTMTLEFEGFYLVTAYVPNSGQDLKRLDYRIGEWERDMRAHLKEL-------------DAKKPVVYMGDLNVAHLDSDIWNVGASHIKKSAGTTPQEREAFGVMLEENDLRDAFRHFHGDAVGWFSYWSVRAGNRPFNKGLRLDYTLASKRVFDGGADGVE----VVDAFILDK--VLGSDHAPVGVTL 267
BLAST of NO26G01390 vs. NCBI_GenBank
Match: CBN76988.1 (ARP; DNA-(apurinic or apyrimidinic site) lyase [Ectocarpus siliculosus]) HSP 1 Score: 212.2 bits (539), Expect = 4.700e-51 Identity = 137/373 (36.73%), Postives = 192/373 (51.47%), Query Frame = 0
Query: 333 RLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQE------------------TKLQEDHVAEVSAALRALHLPGFHGNWHCST--AKKGYSGTSILISEQAGLSLGPGR---VKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLL-----------------------------------------------EGAG--MVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEV 634
R+LSWNV G+R + K + A + ++ E+P +L LQE T Q + A++ + LP + W S A++GY+GT++ + ++ +G + V+ G+ G +G+ EGRV T + +VNVYTPN+G GLKRL+FRT WD+AF ++ L++ + V+ GD+NVA ED DFYNP + R KAAGTTPEER+SF L EG+G +VDTFR HP+ TG +SYWS+RA NRP NRGMRLDY LASR ++ G G V D+F+LD+ TVG+SDH PVGV+L +
Sbjct: 128 RVLSWNVNGIRAQMDKEEGR-KALQGIIAQERPHVLGLQEIRTSATTSTPPGKTRRKKTPPQTSNFADIVKTI----LPDYDTIWLSSVPPARQGYAGTALFVRKKRSWDIGCPKLLGVRGGI-GHPEGDLEGRVTTAELDVAFVVNVYTPNAGAGLKRLDFRTKDWDQAFAAYVRDLEK-------------IKPVVVVGDMNVAHEDVDFYNPEQKRTRKAAGTTPEERSSFAVNLLGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGSGCSLVDTFREKHPKVTGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDG--------VHDAFVLDRDTVGVSDHCPVGVVLRL 473
BLAST of NO26G01390 vs. NCBI_GenBank
Match: XP_005840555.1 (apurinic/apyrimidinic endonuclease family member in base excision repair [Guillardia theta CCMP2712] >EKX53575.1 apurinic/apyrimidinic endonuclease family member in base excision repair [Guillardia theta CCMP2712]) HSP 1 Score: 208.4 bits (529), Expect = 6.800e-50 Identity = 126/341 (36.95%), Postives = 187/341 (54.84%), Query Frame = 0
Query: 332 FRLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLP---GFHGNWHCSTAKKGYSGTSILI---------------------------SEQAGLSLGPGRVKCGME--GEEDGE------GEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPE-ATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEV 634
++++SWNV +R L+KK + + L+ E+PD++C QETKL+++ E L++ P G+ ++ S + K Y+GT +L+ + + P +V G+ ++DGE EGR IT++F +F +V Y PNSGE L+RLEFRT WDR ++L +L+ G+ V+ CGDLNVA D D +N G + K+AGTTPEER SF ++LE G VD FR H E A G +SYWS+RAGNRP+NRG+RLDYF+AS+++ + +PRV+D+ I D+ DHA + + L V
Sbjct: 131 YKIVSWNVTTIRSLMKKNP---ELLKKLMEQEQPDLICFQETKLKQEEHDEYEEMLKS-QFPGDQGYEAHFSSSLSNKSYAGTLVLVRSSKDKATAQKQTKMDSFFKGKDSKSAKKDEETACPPLKVTFGLSTLSKDDGEIAAEVIQEGRTITVEFESFFVVATYVPNSGEKLQRLEFRTKLWDRKVVEYLKKLE------------ASGKPVIWCGDLNVAHLDNDIWNVGAKHLVKSAGTTPEERDSFSKILE-EGYVDCFRHLHGEDAKGWFSYWSVRAGNRPWNRGLRLDYFVASKSLC-----SQDSLPRVVDADIHDEFVA--IDHAAISLTLAV 447 The following BLAST results are available for this feature:
BLAST of NO26G01390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01390 ID=NO26G01390|Name=NO26G01390|organism=Nannochloropsis oceanica|type=gene|length=2333bpback to top protein sequence of NO26G01390.1 >NO26G01390.1-protein ID=NO26G01390.1-protein|Name=NO26G01390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=649bpback to top Synonyms
Publications
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