NO26G01390, NO26G01390 (gene) Nannochloropsis oceanica

Overview
NameNO26G01390
Unique NameNO26G01390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2333
Alignment locationchr26:443386..445718 -

Link to JBrowse

Properties
Property NameValue
DescriptionDNA-(apurinic or apyrimidinic site) lyase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:443386..445718 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0004518nuclease activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR004808AP_endonuc_1
IPR005135Endo/exonuclease/phosphatase
Homology
BLAST of NO26G01390 vs. NCBI_GenBank
Match: EWM23176.1 (apurinic endonuclease-redox protein [Nannochloropsis gaditana])

HSP 1 Score: 465.3 bits (1196), Expect = 3.100e-127
Identity = 229/302 (75.83%), Postives = 252/302 (83.44%), Query Frame = 0
Query:  334 LLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFHGNWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQ--ATVGLSDHAPVGVLLEV 634
            LLSWNVAGLRGLLKKG+   +AFRSLLL E+PD+LCLQETKLQE+HVAEV+AALR LHLP F GNWHCSTAKKGYSGTS+L+SE AGL++GPG V CGMEG         VI++D GAF+LVNVYTPNSGEGL+RL FRT +WDRAFE+HL  LQ  G         +G RAVLCCGDLNVA  DADFYNPGE RMAKAAGTTPEERASFGRLLEGAGMVD+FR YHP+ TGCYSYWSMRAGNRP+NRGMRLDYFLAS+NM+RG  EG  GVPR+LDSFILDQ  A   LSDHAPVGVLLEV
Sbjct:  274 LLSWNVAGLRGLLKKGETAAEAFRSLLLRERPDVLCLQETKLQEEHVAEVAAALRELHLPTFEGNWHCSTAKKGYSGTSVLVSESAGLAVGPGGVTCGMEGXXXXXXXXXVISVDLGAFTLVNVYTPNSGEGLRRLAFRTQAWDRAFERHLEALQGAG---------DGNRAVLCCGDLNVAHLDADFYNPGEARMAKAAGTTPEERASFGRLLEGAGMVDSFRHYHPDVTGCYSYWSMRAGNRPYNRGMRLDYFLASKNMLRGGDEG-GGVPRLLDSFILDQDPAVSKLSDHAPVGVLLEV 565          
BLAST of NO26G01390 vs. NCBI_GenBank
Match: XP_002501276.1 (predicted protein [Micromonas commoda] >ACO62534.1 predicted protein [Micromonas commoda])

HSP 1 Score: 238.8 bits (608), Expect = 4.700e-59
Identity = 137/304 (45.07%), Postives = 177/304 (58.22%), Query Frame = 0
Query:  332 FRLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFHG-NWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEVE 635
            F+ +SWNVAGLR LL K   T+   R +   E PD++C+QE KLQ+ HV +    L  + LP +    +  STAKKGYSG   ++        G G  +CG         EGRV+T++F AF++V  Y PNSG+ L+RLE+R   WD  F  +L  L   GE          G+ V+  GDLNV   D D YN   P   K  G TPEER+S+ R LE   +VDTFR +HP A G YSYWS RAGN+P NRG+RLDYF AS  +M    +G  G  RV+DSF+LD+     SDHAPVG+ L ++
Sbjct:   79 FKAISWNVAGLRALLDKNSHTL---RRIADVESPDVICVQEHKLQDVHVNDAVRRLGEI-LPEYRTVKFAVSTAKKGYSGLLSVVE-------GMGDFRCGY------TDEGRVLTLEFDAFTMVFTYVPNSGQKLERLEYRLKKWDVDFRAYLAHLD--GE--------TRGKPVIVGGDLNVGHLDEDIYNVDAPHTKKQCGLTPEERSSWTRTLESVKLVDTFRAFHPNARGWYSYWSGRAGNKPRNRGLRLDYFAASERIMSSGRDG--GGVRVVDSFVLDKLVAEASDHAPVGITLALD 353          
BLAST of NO26G01390 vs. NCBI_GenBank
Match: PRW45261.1 (apurinic endonuclease-redox [Chlorella sorokiniana])

HSP 1 Score: 237.3 bits (604), Expect = 1.400e-58
Identity = 144/311 (46.30%), Postives = 183/311 (58.84%), Query Frame = 0
Query:  333 RLLSWNVAGLRGLLKKG--------DATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFHGNWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFG-RLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEVE 635
            R+LSWNVAGLR LLKK         +  + +  +L+  EK D+LCLQE KLQ DH   V   L  L LPG+H  W+CS  KKGYSGT+IL  +       P  V CG+ G+ D +GEGRV+T +F  F LVN Y PNSGEGLKRL++R   WD+ F  +L  LQ+              + V+  GDLNVA  D D +NP      K+AG TPEERASF   LL G G+VDTFR  HPEA G Y+YWS R   R  NRG RLD+FL S+ +            RV D ++L    +G SDH P+G++L+++
Sbjct:   14 RILSWNVAGLRALLKKVKEAQEGRLEQNVPSLPALVEAEKADVLCLQEIKLQADHCEGV---LAELGLPGWHVTWNCSKDKKGYSGTAILSKD------SPLSVSCGI-GDPDHDGEGRVVTAEFDQFFLVNTYVPNSGEGLKRLDYRVQQWDKEFAAYLQGLQQ-------------RKPVVLTGDLNVAPTDIDIHNP--KGNLKSAGFTPEERASFADNLLAGCGLVDTFRAQHPEAVG-YTYWSYRFNARANNRGWRLDHFLVSQALHE----------RVHDCYLL-PGVMG-SDHCPLGLVLKMD 286          
BLAST of NO26G01390 vs. NCBI_GenBank
Match: OUS43864.1 (ARP protein, partial [Ostreococcus tauri])

HSP 1 Score: 230.3 bits (586), Expect = 1.700e-56
Identity = 133/325 (40.92%), Postives = 188/325 (57.85%), Query Frame = 0
Query:  331 LFRLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFH-GNWHCSTAKKGYSGT-----------SILISEQAGLSLGPGRVKCGMEGEEDGEG---------EGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEVE 635
            +F+ +SWNVAGLR  ++K  A +   R+L+  E+PD++ LQE KLQ  H+    + L+ L  PG+    +  STAKKGYSG             + I    G +  P  V  G +     EG         EGR +TI++  F +V+ Y PNSG+ LKRL++R   W+R  + HL  L             +  + V+  GDLNVA  DAD +N     + K+AGTTP+ER +FG +LE  G+ D+FRF+H +A G +SYWS+RAGNRPFN+G+RLDY +AS+ +  G   G +    V+D+FILDQ T   SDHAPVG+ L ++
Sbjct:  159 IFKAISWNVAGLRSFVEKSGAKL---RALVEEERPDVIILQEHKLQMSHIDAFGSKLKEL-CPGYDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPA-VSDGFKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKAL-------------DAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVE----VVDAFILDQVTG--SDHAPVGITLAIK 459          
BLAST of NO26G01390 vs. NCBI_GenBank
Match: XP_022838498.1 (Exodeoxyribonuclease III xth [Ostreococcus tauri] >CEF97122.1 Exodeoxyribonuclease III xth [Ostreococcus tauri])

HSP 1 Score: 229.6 bits (584), Expect = 2.800e-56
Identity = 133/324 (41.05%), Postives = 187/324 (57.72%), Query Frame = 0
Query:  332 FRLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFH-GNWHCSTAKKGYSGT-----------SILISEQAGLSLGPGRVKCGMEGEEDGEG---------EGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEVE 635
            F+ +SWNVAGLR  ++K  A +   R+L+  E+PD++ LQE KLQ  H+    + L+ L  PG+    +  STAKKGYSG             + I    G +  P  V  G +     EG         EGR +TI++  F +V+ Y PNSG+ LKRL++R   W+R  + HL  L             +  + V+  GDLNVA  DAD +N     + K+AGTTP+ER +FG +LE  G+ D+FRF+H +A G +SYWS+RAGNRPFN+G+RLDY +AS+ +  G   G +    V+D+FILDQ T   SDHAPVG+ L ++
Sbjct:   51 FKAISWNVAGLRSFVEKSGAKL---RALVEEERPDVIILQEHKLQMSHIDAFGSKLKEL-CPGYDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPA-VSDGFKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKAL-------------DAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVE----VVDAFILDQVTG--SDHAPVGITLAIK 350          
BLAST of NO26G01390 vs. NCBI_GenBank
Match: GBG28833.1 (DNA-apurinic or apyrimidinic site lyase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 228.8 bits (582), Expect = 4.800e-56
Identity = 123/295 (41.69%), Postives = 165/295 (55.93%), Query Frame = 0
Query:  330 RLFRLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFHGNWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGME---GEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGL 622
            +LF++LSWNV GLR + +K  A +    +L   EKP I+CLQETK+QE HV +         LPG+   W CST KKGY+GT++ +++        G  KC +    G +  EGEGR IT      +LV++Y PN+G+ LKRLE+RT  WD     +L  L+            E G   + CGDLNVA  D D +NP    + K AG+TPEERASF   L     VD FR+ H +A G ++YWSMR   RPFNRG RLDYF   R +            R+ D+++L + TVG+
Sbjct:  150 KLFKVLSWNVNGLRAMARKQPAML---ATLAQEEKPQIVCLQETKIQESHVGDFEKL-----LPGYTSFWSCSTVKKGYAGTALFVAD--------GYEKCEVSYGIGMDKHEGEGRAITARLPFCNLVSLYVPNAGQDLKRLEYRTKEWDLDLRSYLRDLE-----------AETGLPCIVCGDLNVAHRDLDVWNPDAKHVPKTAGSTPEERASFTEFLHEMEYVDAFRYLHGDAKGHFTYWSMRTNGRPFNRGNRLDYFCMPRRVAEAAATDADTPVRLHDTYVLHEPTVGV 417          
BLAST of NO26G01390 vs. NCBI_GenBank
Match: XP_005848578.1 (hypothetical protein CHLNCDRAFT_30910 [Chlorella variabilis] >EFN56476.1 hypothetical protein CHLNCDRAFT_30910 [Chlorella variabilis])

HSP 1 Score: 222.6 bits (566), Expect = 3.500e-54
Identity = 142/308 (46.10%), Postives = 181/308 (58.77%), Query Frame = 0
Query:  334 LLSWNVAGLRGLLKK--------GDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLP-GFHGNWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLE 633
            +LSWNVAGLR LLKK         +  I    +L   E+ D+LCLQE KLQEDH  EV   L+ L+LP G+H +W+CS  KKGYSGT+I +S QA LS     V CG+ G E+ +GEGRVIT +F AF LVN YTPNSGEGLKRL +R   WD+ F  +L RL             E  + V+  GDLNVA  + D ++P      K+AG TP+ERASF   L G G VD FR  +PEA   Y+YW  R   R  N+G RLD+FL S+ +             + D + L  A +G SDH P+G++L+
Sbjct:  101 ILSWNVAGLRALLKKVKEVEAGTRNENIPTLVALAEAEQADVLCLQEIKLQEDHCVEV---LKELNLPEGWHVSWNCSRDKKGYSGTAI-VSRQAPLS-----VSCGI-GAEEHDGEGRVITAEFSAFYLVNCYTPNSGEGLKRLGYRVEKWDKDFSAYLKRL-------------EQHKPVVVTGDLNVAPAEIDIHSP--KTNLKSAGFTPQERASFAANLLGQGFVDCFRTQYPEAV-AYTYWGYRFNARGNNKGWRLDHFLVSQQLHSS----------LHDCYHL-PAIMG-SDHCPLGLVLK 370          
BLAST of NO26G01390 vs. NCBI_GenBank
Match: XP_001416660.1 (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >ABO94953.1 predicted protein, partial [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 216.9 bits (551), Expect = 1.900e-52
Identity = 128/296 (43.24%), Postives = 171/296 (57.77%), Query Frame = 0
Query:  336 SWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFHGNWHCSTAKKGYSGTSILISEQAGLSLGPGRVKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLL 632
            +WNVAGLR   +K   ++D  R ++  E PD++ LQE KLQE H A  +  LR          +  S AKKGYSG    ++   G  L   R   G  G  D   EGR +T++F  F LV  Y PNSG+ LKRL++R   W+R    HL  L             +  + V+  GDLNVA  D+D +N G   + K+AGTTP+ER +FG +LE   + D FR +H +A G +SYWS+RAGNRPFN+G+RLDY LAS+ +  G  +G +    V+D+FILD+  V  SDHAPVGV L
Sbjct:    1 AWNVAGLRSFHEK---SLDRLRGVIAGEAPDVVILQEHKLQETHCAAFTERLRRDFPMYKTVQFAVSVAKKGYSG----VATYDGPKLLEIREGLGARGYTD---EGRTMTLEFEGFYLVTAYVPNSGQDLKRLDYRIGEWERDMRAHLKEL-------------DAKKPVVYMGDLNVAHLDSDIWNVGASHIKKSAGTTPQEREAFGVMLEENDLRDAFRHFHGDAVGWFSYWSVRAGNRPFNKGLRLDYTLASKRVFDGGADGVE----VVDAFILDK--VLGSDHAPVGVTL 267          
BLAST of NO26G01390 vs. NCBI_GenBank
Match: CBN76988.1 (ARP; DNA-(apurinic or apyrimidinic site) lyase [Ectocarpus siliculosus])

HSP 1 Score: 212.2 bits (539), Expect = 4.700e-51
Identity = 137/373 (36.73%), Postives = 192/373 (51.47%), Query Frame = 0
Query:  333 RLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQE------------------TKLQEDHVAEVSAALRALHLPGFHGNWHCST--AKKGYSGTSILISEQAGLSLGPGR---VKCGMEGEEDGEGEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLL-----------------------------------------------EGAG--MVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEV 634
            R+LSWNV G+R  + K +    A + ++  E+P +L LQE                  T  Q  + A++   +    LP +   W  S   A++GY+GT++ + ++    +G  +   V+ G+ G  +G+ EGRV T +     +VNVYTPN+G GLKRL+FRT  WD+AF  ++  L++              + V+  GD+NVA ED DFYNP + R  KAAGTTPEER+SF   L                                               EG+G  +VDTFR  HP+ TG +SYWS+RA NRP NRGMRLDY LASR ++ G G        V D+F+LD+ TVG+SDH PVGV+L +
Sbjct:  128 RVLSWNVNGIRAQMDKEEGR-KALQGIIAQERPHVLGLQEIRTSATTSTPPGKTRRKKTPPQTSNFADIVKTI----LPDYDTIWLSSVPPARQGYAGTALFVRKKRSWDIGCPKLLGVRGGI-GHPEGDLEGRVTTAELDVAFVVNVYTPNAGAGLKRLDFRTKDWDQAFAAYVRDLEK-------------IKPVVVVGDMNVAHEDVDFYNPEQKRTRKAAGTTPEERSSFAVNLLGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGSGCSLVDTFREKHPKVTGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDG--------VHDAFVLDRDTVGVSDHCPVGVVLRL 473          
BLAST of NO26G01390 vs. NCBI_GenBank
Match: XP_005840555.1 (apurinic/apyrimidinic endonuclease family member in base excision repair [Guillardia theta CCMP2712] >EKX53575.1 apurinic/apyrimidinic endonuclease family member in base excision repair [Guillardia theta CCMP2712])

HSP 1 Score: 208.4 bits (529), Expect = 6.800e-50
Identity = 126/341 (36.95%), Postives = 187/341 (54.84%), Query Frame = 0
Query:  332 FRLLSWNVAGLRGLLKKGDATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLP---GFHGNWHCSTAKKGYSGTSILI---------------------------SEQAGLSLGPGRVKCGME--GEEDGE------GEGRVITIDFGAFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGXXXXXIEGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGAGMVDTFRFYHPE-ATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGEGKKGVPRVLDSFILDQATVGLSDHAPVGVLLEV 634
            ++++SWNV  +R L+KK     +  + L+  E+PD++C QETKL+++   E    L++   P   G+  ++  S + K Y+GT +L+                            +    +  P +V  G+    ++DGE       EGR IT++F +F +V  Y PNSGE L+RLEFRT  WDR   ++L +L+              G+ V+ CGDLNVA  D D +N G   + K+AGTTPEER SF ++LE  G VD FR  H E A G +SYWS+RAGNRP+NRG+RLDYF+AS+++       +  +PRV+D+ I D+      DHA + + L V
Sbjct:  131 YKIVSWNVTTIRSLMKKNP---ELLKKLMEQEQPDLICFQETKLKQEEHDEYEEMLKS-QFPGDQGYEAHFSSSLSNKSYAGTLVLVRSSKDKATAQKQTKMDSFFKGKDSKSAKKDEETACPPLKVTFGLSTLSKDDGEIAAEVIQEGRTITVEFESFFVVATYVPNSGEKLQRLEFRTKLWDRKVVEYLKKLE------------ASGKPVIWCGDLNVAHLDNDIWNVGAKHLVKSAGTTPEERDSFSKILE-EGYVDCFRHLHGEDAKGWFSYWSVRAGNRPWNRGLRLDYFVASKSLC-----SQDSLPRVVDADIHDEFVA--IDHAAISLTLAV 447          
The following BLAST results are available for this feature:
BLAST of NO26G01390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23176.13.100e-12775.83apurinic endonuclease-redox protein [Nannochlorops... [more]
XP_002501276.14.700e-5945.07predicted protein [Micromonas commoda] >ACO62534.1... [more]
PRW45261.11.400e-5846.30apurinic endonuclease-redox [Chlorella sorokiniana... [more]
OUS43864.11.700e-5640.92ARP protein, partial [Ostreococcus tauri][more]
XP_022838498.12.800e-5641.05Exodeoxyribonuclease III xth [Ostreococcus tauri] ... [more]
GBG28833.14.800e-5641.69DNA-apurinic or apyrimidinic site lyase [Aurantioc... [more]
XP_005848578.13.500e-5446.10hypothetical protein CHLNCDRAFT_30910 [Chlorella v... [more]
XP_001416660.11.900e-5243.24predicted protein, partial [Ostreococcus lucimarin... [more]
CBN76988.14.700e-5136.73ARP; DNA-(apurinic or apyrimidinic site) lyase [Ec... [more]
XP_005840555.16.800e-5036.95apurinic/apyrimidinic endonuclease family member i... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005930NSK005930Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01390.1NO26G01390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600725gene_7971Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100484g4gene7273Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01390.1NO26G01390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01390 ID=NO26G01390|Name=NO26G01390|organism=Nannochloropsis oceanica|type=gene|length=2333bp
ATGCCAACGCCCTTGCCCCGCTTGTCGCTCCAGCTCGCATTTCTACTCAG
CGGTACCTTCACCCACGCTTTCCGCCTGGGTACGCGCCTACCGGCGACGG
CGGGATTGTGCTTCCCACACCGCTCCTTGAGCAGCACTAGCACCTGCAGT
AGCAAGGCCCTCATCTCATCCCTCGTCTTTTACACCTCTGGAACGCCATC
AAGCAGCAGTACTTTACCGTCGTCCTTGTCACGATCATCGTGGGACAGTA
GAAGCAGGAGTATCAGAAGCAACGCTCAAAGCAATCGATCGgtaaggcaa
acgcagcggcggaagtgaagaagagtgatagagtttcaggtacagcagac
attcaattcatcaatgcttctctctgagcagataaaaagcaaagcaggtc
attttttttcgacgtttaagaatttacctatgcataccattcccaaacca
ctagATGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCCCCCCCTCCACCCCTCCTTCGAGGAGCCCCATCACAACC
ACCACCGGCAACAATGACACGGCCGGTCCCGCCCCCTCTTCCGACCCCAC
AAGTAGGAAACGTGGGCGTCCCTCTAGTAAGGCAAAGGCTGCAGCTATAG
CAGTTGCCGCAGGAGCGGTTTCAACAACATCGGTCGAAGAAGAAAAGGGA
AAAGGAGAAGCACTACTATTACCTGTCCACGAGATGAAAGCGGCGACTAT
GAAGACAAAGAAAGAAGAGGCGATTGTCGCCATCGCAACAGCGGCAAAGA
AACGTAGGACGAAAACAGAAAAAGTTAATGCTGCTACTGCTGCTGCTGCT
GCTGCTGTTACAGAAAAATACACAGATCCTTCGTTCTCCTCTCTACCCGC
CAAACAAGGCCACAAGAAAACGGAACTCATCCGCGATCTTGCAGCACCAG
CGGCAACAGCAGCAGTAGCAACAACAGCAGCAGCACCAGCGATTGCAGCG
GCAGCAGTCCCTCTCAACAAAGTCATACGTACCCGTACCCCGCGTTCCAC
CATCCCCCGTGCACTCACGCCCCGGGTCGAAAACGGCTCGTCCTCTTCCT
CCCTTATTTCCTCCTCCTCATCCTCCTCCTCCTCCATATCACAACAAAAG
AGGCTCTTCCGTCTTCTCTCTTGGAATGTTGCAGGGCTACGAGGTCTTCT
TAAAAAAGGAGATGCCACCATTGACGCTTTCCGCTCCCTCCTTCTCCACG
AAAAACCTGATATTCTCTGCCTCCAGGAGACCAAACTGCAAGAGGgtagg
cgcactgctttcgtcccattctgtcgtactctctcttgttttcttcctcc
ctccctccctccctccctacctttttctcccctctgcggactacgtacgt
cgctaaagtgagcgttgctatgcatgcgttaagtttgcctcggtgtcaaa
tgaactggccattgtgtaccttcaaccctaccttcctccccctcttcctc
cttccctttaccaaatagACCATGTGGCTGAAGTCAGCGCTGCCTTGCGT
GCTTTACATTTGCCTGGATTTCACGGCAACTGGCATTGCTCCACCGCCAA
AAAAGGCTATTCAGGCACCTCAATTTTAATAAGTGAACAAGCAGGGCTGA
GTCTAGGCCCTGGGCGGGTGAAGTGCGGGATGGAGGGGGAGGAGGACGGG
GAGGGGGAAGGAAGGGTCATAACGATTGATTTTGGTGCGTTTAGTTTGGT
GAATGTCTACACGCCGAATAGTGGGGAGGGATTGAAGAGGTTGGAGTTTC
GAACCAACAGTTGGGACAGAGCATTTGAACAGCATTTGTTGCGGTTGCAG
AGGGGAGGAGAAGGAGGAAGAGGAGGAGGCGGAATAGAGGGAGGGAGGGC
GGTGTTGTGTTGTGGAGATTTGAATGTAGCGTTTGAGGATGCTGATTTTT
ACAATCCAGGCGAGCCACGGATGGCTAAGGCTGCGGGGACAACACCGGAG
GAACGAGCGTCGTTCGGGCGCTTGTTGGAGGGAGCGGGGATGGTGGACAC
GTTCAGATTTTACCATCCGGAGGCGACGGGGTGTTATTCGTATTGGTCGA
TGCGGGCAGGGAACCGGCCTTTCAATCGAGGGATGCGCCTGGATTATTTC
TTGGCAAGTCGGAATATGATGAGGGGTAAGGGGGAGGGGAAGAAGGGAGT
GCCAAGGGTGTTGGACTCGTTTATTTTGGACCAGGCGACGGTGGGGTTGA
GCGACCATGCACCGGTTGGTGTGTTATTAGAGGTAGAGGGAGTGGGTGGA
GCGCCAGACGGGAGGGGAAAATTGGGAGACTAA
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protein sequence of NO26G01390.1

>NO26G01390.1-protein ID=NO26G01390.1-protein|Name=NO26G01390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=649bp
MPTPLPRLSLQLAFLLSGTFTHAFRLGTRLPATAGLCFPHRSLSSTSTCS
SKALISSLVFYTSGTPSSSSTLPSSLSRSSWDSRSRSIRSNAQSNRSMSS
SSSSSSSSSSSSSSSSPPSTPPSRSPITTTTGNNDTAGPAPSSDPTSRKR
GRPSSKAKAAAIAVAAGAVSTTSVEEEKGKGEALLLPVHEMKAATMKTKK
EEAIVAIATAAKKRRTKTEKVNAATAAAAAAVTEKYTDPSFSSLPAKQGH
KKTELIRDLAAPAATAAVATTAAAPAIAAAAVPLNKVIRTRTPRSTIPRA
LTPRVENGSSSSSLISSSSSSSSSISQQKRLFRLLSWNVAGLRGLLKKGD
ATIDAFRSLLLHEKPDILCLQETKLQEDHVAEVSAALRALHLPGFHGNWH
CSTAKKGYSGTSILISEQAGLSLGPGRVKCGMEGEEDGEGEGRVITIDFG
AFSLVNVYTPNSGEGLKRLEFRTNSWDRAFEQHLLRLQRGGEGGRGGGGI
EGGRAVLCCGDLNVAFEDADFYNPGEPRMAKAAGTTPEERASFGRLLEGA
GMVDTFRFYHPEATGCYSYWSMRAGNRPFNRGMRLDYFLASRNMMRGKGE
GKKGVPRVLDSFILDQATVGLSDHAPVGVLLEVEGVGGAPDGRGKLGD*
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Synonyms
Publications