NO26G01380, NO26G01380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01380 vs. NCBI_GenBank
Match: XP_005854081.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Nannochloropsis gaditana CCMP526] >EKU22275.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 302.8 bits (774), Expect = 1.000e-78 Identity = 147/171 (85.96%), Postives = 157/171 (91.81%), Query Frame = 0 Query: 77 SAYSEPTPLASDPPFRIGHGFDIHRLEPGLPLVIGGVKIDFEKGSAAHSDGDALYHSVTDAILGAIGMPDIGQLFPDNDPKWKGANSSAFLKEAHRLMTLRGYKIGNVDVTLILQKPKVMGIKPQMKENVVSLLQTTPDRVNIKARTHENVDSVGESRSWVVHVVILLEKV 248 SAYSEP P A+DPPFRIGHGFDIHRLE GLPLVIGGVKI+FEKGSAAHSDGDALYHSVTDAILGAIG+PDIGQLFPD DPKWKGA+S+ F++EA RLMTLRGY+IGNVDVTLILQKPKV IKPQMK N+V LL T RVNIKARTHE+VDSVGESRSWVVHVVILLEKV Sbjct: 71 SAYSEPVPQATDPPFRIGHGFDIHRLEAGLPLVIGGVKIEFEKGSAAHSDGDALYHSVTDAILGAIGLPDIGQLFPDTDPKWKGADSAQFMREARRLMTLRGYRIGNVDVTLILQKPKVKDIKPQMKANLVELLGTEESRVNIKARTHEHVDSVGESRSWVVHVVILLEKV 241
BLAST of NO26G01380 vs. NCBI_GenBank
Match: EWM23179.1 (2-c-methyl-d-erythritol -cyclodiphosphate synthase [Nannochloropsis gaditana]) HSP 1 Score: 301.6 bits (771), Expect = 2.200e-78 Identity = 146/171 (85.38%), Postives = 157/171 (91.81%), Query Frame = 0 Query: 77 SAYSEPTPLASDPPFRIGHGFDIHRLEPGLPLVIGGVKIDFEKGSAAHSDGDALYHSVTDAILGAIGMPDIGQLFPDNDPKWKGANSSAFLKEAHRLMTLRGYKIGNVDVTLILQKPKVMGIKPQMKENVVSLLQTTPDRVNIKARTHENVDSVGESRSWVVHVVILLEKV 248 SAYSEP P A+DPPFRIGHGFDIHRLE GLPLVIGGVKI+F+KGSAAHSDGDALYHSVTDAILGAIG+PDIGQLFPD DPKWKGA+S+ F++EA RLMTLRGY+IGNVDVTLILQKPKV IKPQMK N+V LL T RVNIKARTHE+VDSVGESRSWVVHVVILLEKV Sbjct: 71 SAYSEPVPQATDPPFRIGHGFDIHRLEAGLPLVIGGVKIEFDKGSAAHSDGDALYHSVTDAILGAIGLPDIGQLFPDTDPKWKGADSAQFMREARRLMTLRGYRIGNVDVTLILQKPKVKDIKPQMKANLVELLGTEESRVNIKARTHEHVDSVGESRSWVVHVVILLEKV 241
BLAST of NO26G01380 vs. NCBI_GenBank
Match: CBJ31080.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 233.8 bits (595), Expect = 5.800e-58 Identity = 111/164 (67.68%), Postives = 132/164 (80.49%), Query Frame = 0 Query: 84 PLASDPPFRIGHGFDIHRLEPGLPLVIGGVKIDFEKGSAAHSDGDALYHSVTDAILGAIGMPDIGQLFPDNDPKWKGANSSAFLKEAHRLMTLRGYKIGNVDVTLILQKPKVMGIKPQMKENVVSLLQTTPDRVNIKARTHENVDSVGESRSWVVHVVILLEKV 248 P +P IGHGFDIHRL G LVIGGV I +E G+ AHSDGD +YHSV DAILGA+G+PDIGQLFPDNDP W GA+SS F++EA+R M RG+++GNVDVTLILQKPKVM IKP M++N+V LL+T+ RVN+KARTHE VDSVGE R+ HVV+LLEKV Sbjct: 4 PDLEEPAMLIGHGFDIHRLVEGKELVIGGVNIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPDWSGADSSIFMEEAYRRMDERGFRVGNVDVTLILQKPKVMDIKPLMRDNIVRLLRTSLGRVNVKARTHEKVDSVGEGRAMACHVVVLLEKV 167
BLAST of NO26G01380 vs. NCBI_GenBank
Match: XP_018811204.1 (PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Juglans regia]) HSP 1 Score: 221.1 bits (562), Expect = 3.900e-54 Identity = 107/183 (58.47%), Postives = 135/183 (73.77%), Query Frame = 0 Query: 68 SKGTTTALSSAYSEPTPLASDP----PFRIGHGFDIHRLEPGLPLVIGGVKIDFEKGSAAHSDGDALYHSVTDAILGAIGMPDIGQLFPDNDPKWKGANSSAFLKEAHRLMTLRGYKIGNVDVTLILQKPKVMGIKPQMKENVVSLLQTTPDRVNIKARTHENVDSVGESRSWVVHVVILLEK 247 S TTT+L + + PL+S P PFR+GHGFD+HRLEPG PL+IGG+ I ++G AHSDGD L H V DAILGA+G+PDIGQ+FPDNDPKWKGA SS F+KEA RLM GY++GN+D TLILQ+PKV K +K N+ +L+ P +N+KA+THE VDS+GE+RS H V+LL K Sbjct: 49 SASTTTSLEAGQA---PLSSMPSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGAPSSVFIKEAVRLMHEAGYELGNLDATLILQRPKVSPHKEAIKANLSALIGADPSVINLKAKTHEKVDSLGENRSIAAHTVVLLMK 228
BLAST of NO26G01380 vs. NCBI_GenBank
Match: CEM14921.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 220.3 bits (560), Expect = 6.600e-54 Identity = 99/160 (61.88%), Postives = 128/160 (80.00%), Query Frame = 0 Query: 87 SDPPFRIGHGFDIHRLEPGLPLVIGGVKIDFEKGSAAHSDGDALYHSVTDAILGAIGMPDIGQLFPDNDPKWKGANSSAFLKEAHRLMTLRGYKIGNVDVTLILQKPKVMGIKPQMKENVVSLLQTTPDRVNIKARTHENVDSVGESRSWVVHVVILLEK 247 S+P RIGHG+DIHRL PGL L +GGVKID+EKG+ AHSDGD ++HS+ DA+ GA+ +PDIGQ FPD DPKWK A+S F+++A R M RGY++GNVDVTLIL++PKV +K MK+N+ L++ P +VNIKARTHE VDSVGE+R+ HVV+LLE+ Sbjct: 56 SEPLMRIGHGYDIHRLAPGLQLTVGGVKIDYEKGTEAHSDGDVIFHSLCDAVFGALALPDIGQQFPDTDPKWKDASSDLFMEDAWRQMEERGYRLGNVDVTLILERPKVKDLKAGMKDNICRLMRVPPSQVNIKARTHEKVDSVGENRAIECHVVVLLER 215
BLAST of NO26G01380 vs. NCBI_GenBank
Match: XP_021754239.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Chenopodium quinoa]) HSP 1 Score: 219.5 bits (558), Expect = 1.100e-53 Identity = 105/172 (61.05%), Postives = 129/172 (75.00%), Query Frame = 0 Query: 80 SEPTPLASDP-----PFRIGHGFDIHRLEPGLPLVIGGVKIDFEKGSAAHSDGDALYHSVTDAILGAIGMPDIGQLFPDNDPKWKGANSSAFLKEAHRLMTLRGYKIGNVDVTLILQKPKVMGIKPQMKENVVSLLQTTPDRVNIKARTHENVDSVGESRSWVVHVVILLEK 247 S+PT L++ PFR+GHGFD+HRLEPG PL+IGG+ I +KG AHSDGD L H V DAILGA+G+PDIGQLFPDNDPKWKGA SS F+KEA RLM GY++GN+D TLILQ+PKV K +K N+ +LL P +N+KA+THE VDS+GE+RS H V+LL K Sbjct: 68 SQPTSLSNSKPSKSLPFRVGHGFDLHRLEPGYPLIIGGIDIPHDKGCEAHSDGDVLLHCVVDAILGALGLPDIGQLFPDNDPKWKGAASSVFIKEAVRLMDEAGYELGNLDATLILQRPKVSPHKEAIKANLSALLGVDPSVLNLKAKTHEKVDSLGENRSIAAHTVVLLMK 239
BLAST of NO26G01380 vs. NCBI_GenBank
Match: XP_010676414.1 (PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Beta vulgaris subsp. vulgaris] >KMT12032.1 hypothetical protein BVRB_5g099910 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 219.2 bits (557), Expect = 1.500e-53 Identity = 109/188 (57.98%), Postives = 131/188 (69.68%), Query Frame = 0 Query: 69 KGTTTALSSAYSEPTPLASDP----------PFRIGHGFDIHRLEPGLPLVIGGVKIDFEKGSAAHSDGDALYHSVTDAILGAIGMPDIGQLFPDNDPKWKGANSSAFLKEAHRLMTLRGYKIGNVDVTLILQKPKVMGIKPQMKENVVSLLQTTPDRVNIKARTHENVDSVGESRSWVVHVVILLEK 247 K T + SA S P S P PFR+GHGFD+HRLEPG PL+IGG+ I ++G AHSDGD L H V DAILGA+G+PDIGQ+FPDNDPKWKGA SS F+KEA RLM GY+IGN+D TLILQ+PKV K +K N+ +LL P VN+KA+THE VDS+GE+RS H V+LL K Sbjct: 41 KPTISFSISAVSTPIAQTSQPNSSSNPSKTLPFRVGHGFDLHRLEPGYPLIIGGIDIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKVSPHKEAIKANLSALLGADPTAVNLKAKTHEKVDSLGENRSIAAHTVVLLMK 228
BLAST of NO26G01380 vs. NCBI_GenBank
Match: XP_018829344.1 (PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Juglans regia]) HSP 1 Score: 219.2 bits (557), Expect = 1.500e-53 Identity = 105/178 (58.99%), Postives = 132/178 (74.16%), Query Frame = 0 Query: 68 SKGTTTALSSAYSEPTPLASDP-PFRIGHGFDIHRLEPGLPLVIGGVKIDFEKGSAAHSDGDALYHSVTDAILGAIGMPDIGQLFPDNDPKWKGANSSAFLKEAHRLMTLRGYKIGNVDVTLILQKPKVMGIKPQMKENVVSLLQTTPDRVNIKARTHENVDSVGESRSWVVHVVILL 245 S TT+AL + + ++ PFR+GHGFD+HRLEPG PL+IGG+ I ++G AHSDGD L H V DAILGA+G+PDIGQ+FPDNDPKWKGA SS F+KEA RLM GY++GN+D TLILQ+PKV K +K N+ +LL P VN+KA+THENVDS+GE+RS H V+LL Sbjct: 49 SAATTSALEGGQAPLSATSAKVLPFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGAPSSVFIKEAVRLMQETGYELGNLDATLILQRPKVSPHKEAIKANLSALLGADPSVVNLKAKTHENVDSLGENRSIAAHTVVLL 226
BLAST of NO26G01380 vs. NCBI_GenBank
Match: XP_012854324.1 (PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Erythranthe guttata] >EYU23425.1 hypothetical protein MIMGU_mgv1a012992mg [Erythranthe guttata]) HSP 1 Score: 218.4 bits (555), Expect = 2.500e-53 Identity = 105/183 (57.38%), Postives = 131/183 (71.58%), Query Frame = 0 Query: 68 SKGTTTALSSAYSEPTPLASDP----PFRIGHGFDIHRLEPGLPLVIGGVKIDFEKGSAAHSDGDALYHSVTDAILGAIGMPDIGQLFPDNDPKWKGANSSAFLKEAHRLMTLRGYKIGNVDVTLILQKPKVMGIKPQMKENVVSLLQTTPDRVNIKARTHENVDSVGESRSWVVHVVILLEK 247 S + A S+ SEP A+ P PFR+GHGFD+HRLEPG PL+IGG+ I ++G AHSDGD L H V DAILGA+G+PDIGQ+FPD DPKWKGA SS F++EA RLM GY++GN+D TLILQ+PKV K ++ N+ LL P VN+KA+THE VDS+GE+RS H V+LL K Sbjct: 51 SVAASAATSAVESEPQTAAASPAKVLPFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDTDPKWKGAASSVFIEEAVRLMHEAGYELGNLDATLILQRPKVSPHKEVIRSNLCKLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMK 233
BLAST of NO26G01380 vs. NCBI_GenBank
Match: KNA25489.1 (hypothetical protein SOVF_006270 [Spinacia oleracea]) HSP 1 Score: 218.4 bits (555), Expect = 2.500e-53 Identity = 101/158 (63.92%), Postives = 124/158 (78.48%), Query Frame = 0 Query: 90 PFRIGHGFDIHRLEPGLPLVIGGVKIDFEKGSAAHSDGDALYHSVTDAILGAIGMPDIGQLFPDNDPKWKGANSSAFLKEAHRLMTLRGYKIGNVDVTLILQKPKVMGIKPQMKENVVSLLQTTPDRVNIKARTHENVDSVGESRSWVVHVVILLEKV 248 PFR+GHGFD+HRLEPG PL+IGG+ I ++G AHSDGD L H V DAILGA+G+PDIGQLFPDNDPKWKGA SS F+KEA RLM GY++GN+D TLILQ+PKV K +K+N+ +LL P VN+KA+THE VDS+GE+RS H V+LL K+ Sbjct: 81 PFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQLFPDNDPKWKGAASSIFIKEAVRLMHEAGYELGNLDATLILQRPKVSPHKEAIKDNLSALLGVDPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMKM 238 The following BLAST results are available for this feature:
BLAST of NO26G01380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01380 ID=NO26G01380|Name=NO26G01380|organism=Nannochloropsis oceanica|type=gene|length=744bpback to top protein sequence of NO26G01380.1 >NO26G01380.1-protein ID=NO26G01380.1-protein|Name=NO26G01380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=248bpback to top Synonyms
Publications
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