NO26G01370, NO26G01370 (gene) Nannochloropsis oceanica

Overview
NameNO26G01370
Unique NameNO26G01370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1889
Alignment locationchr26:438311..440199 +

Link to JBrowse

Properties
Property NameValue
DescriptionIg family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:438311..440199 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019405Lactonase_7-beta_prop
Homology
BLAST of NO26G01370 vs. NCBI_GenBank
Match: EWM23177.1 (ig family protein [Nannochloropsis gaditana])

HSP 1 Score: 541.2 bits (1393), Expect = 3.500e-150
Identity = 294/503 (58.45%), Postives = 368/503 (73.16%), Query Frame = 0
Query:   10 GRIKATIMAAAFLGMSCSCCATASDGVRDGSSGNSGGPMQAGGLSTTSPFQRQYVRRR-EDGDKDNNPLAISPSAPRPSAATAALDLVLPD-----GQDIILAPDGGNDKSNLPDLHVLFLQQYGLTKGPGPLSLSTDKKNLYAVTGEALYSFSTTPSSGKIDKIQEMRDGVVDRNGRKVEYFTGLTALTLSPDDQNVYTVGTSVMPGVGGITVLKRNENGELSLVQQYRIDQRADIMDIEGMIGANSVAVSPDGKYTYVSSGGYYRDHNLLVFSRSPHTGNLTLIQNIDVYNTSASRVLPSTLVVAPDGKHVYVVGDNFAISTSVILVYGVEEDGTLTQTQEAGPFRSTLLTSATFDPSGAFLYSTASLGNNLVWIFQRQPDGRLTTVIDPVILPSLTSPSSGQRDEVPAPQGSYSSSLALEHPLLGPLLLVSVEKDNVVHAAVRQTGEGQQGRLIYLRGEIGGEGGKEGRLNRPSSMAWDETAEVLYVSETGDNAISSYKL 507
            G +K T++A    G++  C A A  GVR+   G +G   + GGLST++  QRQ+VRR  E     ++P   SP      A TA + + +PD       DI  +P+ GN   +LP L V FL Q+ LTKGPGPL+L+ +KKNLYA+T EAL +FS  P SG +++IQ++++GVVDRNG+ VEYFTGLTAL LSPD++NVYTVGTS+MPGVGGITVLKR+  GEL+LVQQ R+DQR  I+D+EGMIGANSVA SPDG++ YVSSGGYYRDH+LLVF R P  G L+L+Q+ID+YNTSA+RVLPSTL VAPDGKHVYV+GDNFAISTS I+VY V EDG L   QEAGPFRS LLTSA+F PSG FLY TA+ G NLVW+F+R+PDG+LTTVIDP + P       G  D VP  QGSYSS++A++H +LGPLLLVSVEK+N+VH A+R   E ++GRL YL             L RP SMAWD    VL+VSE+GDNAI++++L
Sbjct:   78 GSLKTTMVALVLYGLAKPCNAAAEGGVRE--RGQTGKRAEEGGLSTSNAPQRQHVRRHGETIMPHSDPPIYSP------AGTAEIAVEVPDYRILASGDIPGSPERGNGSISLPTLDVSFLHQHALTKGPGPLALAGNKKNLYAMTAEALLAFSVDPGSGTMEQIQDLQNGVVDRNGKTVEYFTGLTALALSPDEENVYTVGTSMMPGVGGITVLKRDARGELALVQQLRVDQRKGIVDVEGMIGANSVAPSPDGRFIYVSSGGYYRDHHLLVFDREPVAGRLSLLQSIDIYNTSAARVLPSTLAVAPDGKHVYVIGDNFAISTSAIMVYAVGEDGALELKQEAGPFRSALLTSASFAPSGEFLYCTATFGINLVWVFRREPDGQLTTVIDPALNP-------GGMD-VPPTQGSYSSAVAVQHSVLGPLLLVSVEKENLVHVALRV--EEREGRLAYLGA--XXXXXXXXXLKRPDSMAWDAENSVLFVSESGDNAIAAFRL 560          
BLAST of NO26G01370 vs. NCBI_GenBank
Match: ODH02997.1 (hypothetical protein A4S05_21600 [Nostoc sp. KVJ20])

HSP 1 Score: 95.9 bits (237), Expect = 3.800e-16
Identity = 83/271 (30.63%), Postives = 132/271 (48.71%), Query Frame = 0
Query:  132 GPGPLSLSTDKKNLY--AVTGEALYSFSTTPSSGKIDKIQEMRDGVVDRNGRKVEYFTGLTALTLSPDDQNVYTVGTSVMPGVGGITVLKRN-ENGELSLVQQYRIDQRADIMDIEGMIGANSVAVSPDGKYTYVSSGGYYRDHNLLVFSRSPHTGNLTLIQ-NIDVYNTSASRVLPSTLVVAPDGKHVYVVGDNFAISTSVILVYGVEEDGTLT-----QTQEAGPFRSTLLTSATFDPSGAFLYSTASLGNNLVWIFQR-QPDGRLTTV 393
            G   L++S D K LY       A+  F     +G++  ++  +D   D NG  V+   G  ++T+S D + +Y  G +       + V +RN E G+L+ V+     Q+ D   ++G+ GANSV VSPDGKY YV+    + D  + VF R+  TG LT ++   D  N        + + V+ DGK++Y  G N    ++V +    +E G LT     +    G      + S T  P G +LY+ A   ++ V +F+R Q  G+LT V
Sbjct:   76 GAESLAVSPDGKFLYVPGYNDSAVAVFERNQQTGQLSFVEVQKD---DTNG--VDGLNGAASVTVSLDGKYLYAAGYN----DSAVAVFERNQETGQLTFVEV----QKDDTNGVDGLAGANSVIVSPDGKYLYVAG---FDDSAVAVFERNQETGQLTFVEVQKDDTNGVDGLAAAAVVTVSLDGKYLYTAGYN---DSAVAVFERNQETGQLTFVEVQKDDTNGVDGLAQVYSITISPDGKYLYA-AGYNDSAVAVFERNQETGQLTFV 326          
BLAST of NO26G01370 vs. NCBI_GenBank
Match: OQY55077.1 (hypothetical protein B6247_09165 [Beggiatoa sp. 4572_84])

HSP 1 Score: 88.6 bits (218), Expect = 6.100e-14
Identity = 86/324 (26.54%), Postives = 149/324 (45.99%), Query Frame = 0
Query:   69 DGDKDNNPLAISPSAPRPSAATAALDLVLPDGQDIILAPDGGNDKSNLPDLHVLFLQQYGLTKGPGPLSLSTDKKNLYAVTG---EALYSFSTTPSSGKIDKIQEMRDGVVDRNGRKVEYFTGLTALTLSPDDQNVYTVGTSVMPGVGGITVLKRN-ENGELSLVQQYRID-QRADIMDIEGMIGANSVAVSPDGKYTYVSSGGYYRDHNLLVFSRSPHTGNLTLIQNIDVYNTSASRVLPST-LVVAPDGKHVYVVGDNFAISTSVILVYGVEEDGTLTQTQEAGPFRSTL-----LTSATFDPSGAFLYSTASLGNNLVWIF 382
            +G +  N +A+SP       A+        D   ++   D  + +  L ++    +       G   +++S+D + LY VTG    A+  F    ++G +  +Q+ +DGV       V+   G TA+ +S D+  +Y  G +       + V  RN + GEL+ V  Y+   Q  D   I G+ GA +V VSP+  + YV S     D+ L+ FSR+  TG LT +Q       + + +  +  + + PDG +VYV G    ++   + V+  +    L + ++A    S +     +T+ T  P GA +Y TA+L +N V  F
Sbjct:   66 NGLQGPNAIAVSPDNKHVYVASTT------DNAIVVFTRDPSSGQLTLAEIQQNGVNGVEGLAGASAIAISSDNQRLY-VTGTRDNAIVVFERDVNTGTLTFLQKQQDGV-----NNVDGLAGATAVAVSKDNLFIYVTGKN----DNAVAVFSRNPQQGELAFVAAYKNGVQPDDGPTITGLSGAYAVTVSPNNNHVYVVSN---TDNALVAFSRNASTGELTYLQTHQEGTNNINGLSGARGVAIRPDGSNVYVAG----VNDDALAVFNRDTATGLLEFKQAISNSSGITTLDGVTAVTTSPDGALVY-TAALFSNAVTAF 365          
BLAST of NO26G01370 vs. NCBI_GenBank
Match: OQY67996.1 (hypothetical protein B6D46_04795 [Polyangiaceae bacterium UTPRO1])

HSP 1 Score: 88.6 bits (218), Expect = 6.100e-14
Identity = 106/388 (27.32%), Postives = 162/388 (41.75%), Query Frame = 0
Query:  133 PGPLSLSTDKKNLYAV--TGEALYSFSTTPSSGKIDKIQEMRDGVVDRNGRKVEYFTGLTALTLSPDDQNVYTVGTSVMPGVGGITVLKRN-ENGELSLVQQYRIDQRADIMDIEGMIGANSVAVSPDGKYTYVSSGGYYRDHNLLVFSRSPHTGNLTLI--QNIDVYNTSASRVLPSTLVVAPDGKHVYVVG-DNFAI-------STSVILVYGVEEDGTLTQTQEAGPFRSTLLTSATFDPSGAFLYSTASLGNNLVWIFQRQP-DGRLTTVIDPVILPSLTSPSSGQRDEVPAPQGSYSSSLALEHPLLGPLLLVSVEKDNVVHAAVRQTGEGQQGRLIYLRGEIGGEGGKEGRLNRPSSMAWDETAEVLYVSETGDNAISSYKL 507
            P  ++LS D  ++Y       A+  F    ++G++  +++ ++GV       VE   G+ ++T+SPD +NVY  G    P    I V  RN   G LS      I+++ D +  +G+ GA  V VSPDG + Y +      DH + VFSR+P TG LT +  Q   V      R +   +  +PDG HVY  G D+ AI       +T  +     ++DG        G        + +  P G  +Y  A   +  V +F R P  G LT V                RD V    G   +      P  G  L  + E D+ V    R       G L ++  +  G  G +G L    S+A       LY S   DNA++ +++
Sbjct:   62 PCSVALSPDGAHVYVAGRGDNAIGVFIRNGTTGELTFLEQQKNGVAG-----VEGLAGVLSVTVSPDGKNVYAAG----PFDHSIAVFGRNTATGALSF-----IERKIDGVGTDGLAGATWVVVSPDGVHVYAAG---ELDHAIAVFSRNPTTGILTFVEAQRDGVLGVDGLRRIRG-IATSPDGAHVYAAGFDDDAIAVFSRNAATGALTFVEQQKDGI------GGVDGLDGAIAVSVSPDGMHVYG-AGRFDQAVSVFARNPVTGALTFV-------------EQHRDGVAGVDGIGGTIHVTVSP-DGNHLYTASELDHAVAVFGR---NAVTGSLTFVESQTDGVNGVDG-LRTAFSVAVSPDNAYLYASGVADNAVAIFRV 406          
BLAST of NO26G01370 vs. NCBI_GenBank
Match: WP_015127175.1 (DUF4114 domain-containing protein [Calothrix sp. PCC 7507] >AFY31352.1 Ig family protein [Calothrix sp. PCC 7507])

HSP 1 Score: 87.4 bits (215), Expect = 1.400e-13
Identity = 78/267 (29.21%), Postives = 123/267 (46.07%), Query Frame = 0
Query:  136 LSLSTDKKNLY--AVTGEALYSFSTTPSSGKIDKIQEMRDGVVDRNGRKVEYFTGLTALTLSPDDQNVYTVGTSVMPGVGGITVLKRNE-NGELSLVQQYRIDQRADIMDIEGMIGANSVAVSPDGKYTYVSSGGYYRDHNLLVFSRSPHTGNLTLIQ-NIDVYNTSASRVLPSTLVVAPDGKHVYVVGDNFAISTSVILVYGVEED-GTLTQTQEA-----GPFRSTLLTSATFDPSGAFLYSTASLGNNLVWIFQRQPDGRLTTV 393
            L+LS D K LY    +  A+  F     +G +  ++  +D   D NG  V+     T++T+SPD + +Y  G     G   + V +R+E  G+LS V+     Q+ D   ++G+ GA  V VSPDGK+ Y +      +  + VF R   TG L+ ++   D  N        +++ V+PDGK +Y  G       S + V+  +E  G LT  +       G       TS T  P+G +LY+T    + +    + Q  G LT V
Sbjct:   81 LALSPDGKFLYVPGYSDSAVAVFERNQQTGHLSFVEVQKD---DTNG--VDGLANATSVTVSPDGKFLYATGY----GDSAVAVFERDEQTGQLSFVEV----QKDDTNGVDGLAGALFVTVSPDGKFLYAAGAD---ESAVSVFERDEQTGQLSFVEVQKDDTNGVDGLAAVNSVAVSPDGKFLYAAG----FGDSALAVFERDEQTGKLTFVEVQKDNINGVDGLNAATSVTVSPNGKYLYATGYYDSAVAVFERNQETGELTFV 327          
BLAST of NO26G01370 vs. NCBI_GenBank
Match: WP_073645178.1 (DUF4114 domain-containing protein [Nostoc calcicola] >OKH18156.1 hypothetical protein FACHB389_34100 [Nostoc calcicola FACHB-389])

HSP 1 Score: 86.3 bits (212), Expect = 3.000e-13
Identity = 77/253 (30.43%), Postives = 119/253 (47.04%), Query Frame = 0
Query:  136 LSLSTDKKNLYAVTG---EALYSFSTTPSSGKIDKIQEMRDGVVDRNGRKVEYFTGLTALTLSPDDQNVYTVGTSVMPGVGGITVLKRNE-NGELSLVQQYRIDQRADIMDIEGMIGANSVAVSPDGKYTYVSSGGYYRDHNLLVFSRSPHTGNLTLIQ-------NIDVYNTSASRVLPSTLVVAPDGKHVYVVGDNFAISTSVILVYGVEEDGTLT-----QTQEAGPFRSTLLTSATFDPSGAFLYSTAS 373
            +++S D K LYA TG    A+  F     +GK+  ++  +D   D NG  V+   G   +T+SPD + +Y  G         ++V +R+E  G+L+ V+     Q+ D   ++G+   NSV VSPDGK+ Y +  G   D  L VF R   TG LT ++        +D  N + S      + V+PDGK++Y  G      ++V +    +E G LT     +    G       TS T  P G  LY++ S
Sbjct:  134 VTVSPDGKFLYA-TGYGDSAVAVFECDELTGKLTFVEVQKD---DTNG--VDGLAGALFVTVSPDGKFLYAAGAD----ESAVSVFERDEQTGKLTFVEV----QKDDTNGVDGLAAVNSVTVSPDGKFLYAAGFG---DSALAVFERDEQTGKLTFVEVQKDDTDGVDGLNAATS------VTVSPDGKYLYATG---YYDSAVAVFERNQETGELTFVEVQKDDTDGVDGLAATTSVTISPDGKHLYASGS 360          
BLAST of NO26G01370 vs. NCBI_GenBank
Match: WP_045475345.1 (hypothetical protein [Thioploca ingrica] >BAP56423.1 hypothetical protein THII_2126 [Thioploca ingrica])

HSP 1 Score: 84.3 bits (207), Expect = 1.200e-12
Identity = 100/354 (28.25%), Postives = 161/354 (45.48%), Query Frame = 0
Query:  160 PSSGKIDKIQEMRDGVVDRNGRKVEYFTGLTALTLSPDDQNVYTVGTSVMPGVGGITVLKRNE-NGELSLVQQYRIDQRADIMDIEGMIGANSVAVSPDGKYTYVSSGGYYRDHNLLVFSRSPHTGNLTLIQNIDVYNTSASRVLPST--LVVAPDGKHVYVVGDNFAISTSVILVYGVEEDGTLTQTQ-----EAGPFRSTLLTSATFDPSGAFLYSTASLGNNLVWIFQRQP-DGRLTTVIDPVILPSLTSPSSGQRDEVPAPQGSYSSSLALEHPLLGPLLLVSVEKDNVVHAAVRQTGEGQQGRLIYLRGEIGGEGGKEGRLNRPSSMAWDETAEVLYVSETGDNAISSY 505
            P+   +D ++ ++DG    NG K     G +++T+SPD + VY V +S       ITV  RN  +G+L  +Q      + DI  ++G+ GA  V +S DGK  YV+  G   D+ + VFSR+  +G LT  Q +   ++     L  T  + V+ DGK VYV G +     +V ++     +G LT  Q     +AG        S T    G  +Y  A   +N V +F R P +G+LT          L +  SG    V    G+ S +++ +       + V+   DN V    R   +   G LI+ +    G+ G +G L    S+      + LYV+ + D A++ +
Sbjct:   36 PTWAGLDFVETIQDGQGQINGLK-----GASSVTMSPDGKFVYVVSSS----NSAITVFARNPVSGKLVFIQVI----QDDISGVDGLAGAELVTISADGKSVYVAGTG---DNAVAVFSRNLSSGQLTFQQVLKDGDSGIVDGLAGTQSVTVSADGKSVYVAGTS---DDAVAVLARDPGNGQLTFQQVLKDGQAGVDGLDGAVSVTVSADGKSVY-VAGYSDNAVAMFSRDPGNGQLT------FQQVLKNGDSGMIGVVDGLSGADSVTVSAD----DQSVYVASFLDNAVAVLAR---DPSTGLLIFQQVLKDGQAGVDG-LASADSVTVSADGKSLYVAGSFDKAVAVF 355          
BLAST of NO26G01370 vs. NCBI_GenBank
Match: WP_062154159.1 (DUF11 domain-containing protein [Beggiatoa leptomitoformis] >ALG68758.1 hypothetical protein AL038_14965 [Beggiatoa leptomitoformis] >AUI68882.1 hypothetical protein BLE401_09290 [Beggiatoa leptomitoformis])

HSP 1 Score: 84.0 bits (206), Expect = 1.500e-12
Identity = 81/251 (32.27%), Postives = 120/251 (47.81%), Query Frame = 0
Query:  153 LYSFSTTPSSGKIDKIQEMRDGVVDRNGRKVEYFTGLTALTLSPDDQNVYTVGTSVMPGVGGITVLKRNENGELSLVQQYRIDQRADIMDIE--GMIGANSVAVSPDGKYTYVSSGGYYRDHNLLVFSRSPHTGNLTLIQ-NIDVYNTSASRVLPSTLVVAPDGKHVYV--VGDN----FA--ISTSVILVYGVEEDGTLTQTQEAGPFRSTLLTSATFDPSGAFLYSTASLGNNLVWIFQRQPDGRLTTV 393
            L+ F  TPS+  +  +Q   DG    NG  V+       +  SPD   VY V +S+      ITV +R+     + + Q    Q     DI   G++GANSVA+SPDG++ YV+      D +L VF+R+  TG L+L++   D   T    +  + + ++PDG  VYV   GDN    FA   +T V+ + GV+ DG       AG         A  D +  F+Y  AS  +N V +F +Q  G L  +
Sbjct:   32 LWVFCITPSAFALTFLQAQIDGT---NG--VDGIARPNGIATSPDGLFVY-VTSSI---DNAITVFQRDTVSGSATLGQLIFVQVVRSTDISGAGLVGANSVAISPDGRHLYVTG---VTDSSLTVFTRNTTTGMLSLVEVQKDGVGTVTDMLFANVVTLSPDGTRVYVTAAGDNALNVFARDSNTGVLTLLGVQIDGVNGVDGLAG----AADVKAISDGTNTFIY-VASSNDNAVTVFAKQSSGELVFI 265          
BLAST of NO26G01370 vs. NCBI_GenBank
Match: OLC90474.1 (hypothetical protein AUJ03_01150 [Deltaproteobacteria bacterium 13_1_40CM_3_71_4])

HSP 1 Score: 83.6 bits (205), Expect = 2.000e-12
Identity = 63/194 (32.47%), Postives = 96/194 (49.48%), Query Frame = 0
Query:  131 KGPGPLSLSTDKKNLYAVTG--EALYSFSTTPSSGKIDKIQEMRDGVVDRNGRKVEYFTGLTALTLSPDDQNVYTVGTSVMPGVGGITVLKRN-ENGELSLVQQYRIDQRADIMDIEGMIGANSVAVSPDGKYTYVSSGGYYRDHNLLVFSRSPHTGNLTLIQ-NIDVYNTSASRVLPSTLVVAPDGKHVYVVG 321
            K P  L++S D  +LYA +G   A+ +F   PS+G +  +Q ++D     N   V+   G TAL +SP+  +VY  G         I V  R+   G LS ++     +R  +    G+ G  ++AVSPDG + Y ++G     + L VF R P TG+LT +Q   D   T       + + V+ DG +VYV G
Sbjct:    8 KSPQALAISPDGSHLYAASGSNNAVAAFVRDPSTGMLTLVQTVQD-----NTGGVDGLAGATALAVSPEGAHVYVAGKL----DDAIAVFSRDASTGTLSFIEL----ERQAVDGASGLDGVQALAVSPDGTHVYSAAG---TGNALGVFDRDPATGSLTFVQAQRDAVGTVDGLAGVAAVAVSADGNYVYVAG 185          
BLAST of NO26G01370 vs. NCBI_GenBank
Match: EDN70290.1 (conserved hypothetical protein [Beggiatoa sp. PS])

HSP 1 Score: 77.4 bits (189), Expect = 1.400e-10
Identity = 65/236 (27.54%), Postives = 109/236 (46.19%), Query Frame = 0
Query:  136 LSLSTDKKNLYAVTGE--ALYSFSTTPSSGKIDKIQEMRDGVVDRNGRKVEYFTGLTALTLSPDDQNVYTVGTSVMPGVGGITVL--KRNENGELSLVQQYRIDQRADIMDIEGMIGANSVAVSPDGKYTYVSSGGYYRDHNLLVFSRSPHTGNLTLIQNI-DVYNTSASRVLPSTLVVAPDGKHVYVV--GDNFAISTSVILVYGVEEDGTLTQTQEAGPFRSTLLTSATFDPSG 365
            ++L+ +   L A + +  +L  FS   ++G +  IQ + DG     G          ++ +S D ++VYT  +S         VL  +  + G L+L++ Y    + D+  I+G+ G   VAVSPDG+Y Y S  G   D+ + +F R  +TG LT I  + D  +          + V+P G H+YV   GDN   + SV  +   E    +T  Q+       L+ + T + +G
Sbjct:    1 MTLTPESDYLLATSAQSHSLTVFSRDTTNGNLSLIQTLVDGTPGVTG-----LNRANSVVVSQDGKHVYTTASS-----NNTLVLFNRATDTGLLTLIEVY----QDDVKGIDGLGGITDVAVSPDGRYVYASGSG---DNAIAIFRRDANTGKLTFIDLLRDGIDGIDGLTQARAVTVSPQGDHIYVAGFGDN---AVSVFTIATAELSIVMTDNQDPVQINEQLIYTITVNNNG 216          
The following BLAST results are available for this feature:
BLAST of NO26G01370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23177.13.500e-15058.45ig family protein [Nannochloropsis gaditana][more]
ODH02997.13.800e-1630.63hypothetical protein A4S05_21600 [Nostoc sp. KVJ20... [more]
OQY55077.16.100e-1426.54hypothetical protein B6247_09165 [Beggiatoa sp. 45... [more]
OQY67996.16.100e-1427.32hypothetical protein B6D46_04795 [Polyangiaceae ba... [more]
WP_015127175.11.400e-1329.21DUF4114 domain-containing protein [Calothrix sp. P... [more]
WP_073645178.13.000e-1330.43DUF4114 domain-containing protein [Nostoc calcicol... [more]
WP_045475345.11.200e-1228.25hypothetical protein [Thioploca ingrica] >BAP56423... [more]
WP_062154159.11.500e-1232.27DUF11 domain-containing protein [Beggiatoa leptomi... [more]
OLC90474.12.000e-1232.47hypothetical protein AUJ03_01150 [Deltaproteobacte... [more]
EDN70290.11.400e-1027.54conserved hypothetical protein [Beggiatoa sp. PS][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005933NSK005933Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01370.1NO26G01370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600722gene_7968Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100484g1gene7275Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01370.1NO26G01370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01370 ID=NO26G01370|Name=NO26G01370|organism=Nannochloropsis oceanica|type=gene|length=1889bp
TAGGGCCAAGAGTGTACGCGGGCAGCAAAGCGAGTGACCATCTCCGCAGC
TCAATCCCAGCCCCAGCCTCCCCGCCCCGACTCCTTCCCCTCCTTCCGTC
CCTGGCACTCCGCAGCGGAGATCTACACTTCTTATTCACATTTCCCACGC
ACCACAATCATGAATTATCCTGCCCGCCGGTGGAAAGGCCGCATCAAGGC
CACTATCATGGCAGCCGCTTTCCTCGGCATGTCCTGCTCCTGCTGCGCCA
CAGCCTCTGACGGGGTAAGAGATGGCAGCAGCGGAAATAGTGGCGGCCCC
ATGCAAGCGGGTGGGCTGAGCACAACCAGCCCTTTCCAACGACAGTACGT
GCGTCGACGCGAAGACGGGGACAAAGACAACAACCCCCTCGCCATCTCTC
CTTCGGCGCCCCGCCCCTCCGCCGCAACCGCCGCCCTCGATCTTGTACTA
CCGGATGGCCAAGACATAATACTTGCCCCTGACGGTGGCAACGACAAGAG
TAACCTCCCCGACCTCCATGTCCTCTTCCTCCAGCAATACGGCCTGACCA
AAGGCCCAGGCCCGCTCTCCCTCTCCACGGACAAAAAGAACCTCTACGCA
GTCACTGGGGAAGCCCTCTACTCCTTCAGCACCACCCCCAGCTCGGGGAA
AATCGACAAAATCCAAGAAATGAGAGACGGGGTGGTGGATCGCAACGGAA
GAAAGGTTGAGTATTTCACCGGGTTGACAGCTCTGACCCTCTCGCCGGAC
GACCAGAATGTCTACACCGTGGGAACCTCTGTCATGCCTGGCGTGGGGGG
GATAACGGTGCTCAAGAGGAATGAGAACGGAGAGCTGAGCCTGGTGCAGC
AGTACAGGATCGATCAGCGTGCGGACATTATGGATATTGAAGGGATGATT
GGTGCCAACTCCGTCGCTGTTTCCCCTGATGGGAAATATACCTATGTCTC
CTCCGGCGGCTACTACCGGGATCACAACCTCCTCGTGTTCTCCCGTTCTC
CCCATACGGGGAATCTGACCTTGATCCAGAACATCGATGTTTATAACACC
TCAGCCTCGAGGGTACTGCCCTCCACTCTAGTCGTGGCCCCGGACGGGAA
GCACGTGTACGTGGTAGGGGACAACTTTGCCATCTCCACCTCGGTCATCC
TGGTCTACGGAGTGGAGGAGGACGGTACCCTGACCCAGACGCAGGAAGCG
GGCCCCTTCCGCTCTACCCTCTTGACGAGCGCCACCTTTGATCCGTCTGG
GGCCTTCCTGTACAGCACGGCCAGTCTGGgtacgttctcgcctccctccc
tctttccctccctcactccctcctcactcactcttgcttctctgtccttg
aaactccataataagcggtctctatccgcgcataaacggtctctgattcc
agcccccctccctctctccctctctcccccttctctctctctctaactct
ctctatctcttttcctccctcccttcccaaagGCAACAACCTCGTCTGGA
TCTTCCAACGCCAGCCCGACGGCCGACTCACCACCGTCATCGACCCTGTC
ATCCTTCCCTCCCTTACTTCTCCCTCTTCCGGGCAACGAGATGAAGTTCC
TGCCCCCCAGGGGTCTTACTCGTCCTCCCTCGCCCTCGAGCATCCGCTGC
TCGGCCCGTTGTTGCTGGTGAGTGTGGAGAAAGATAACGTCGTACACGCT
GCGGTGCGTCAGACGGGGGAGGGGCAGCAGGGACGGTTGATCTACCTTCG
GGGAGAGATAGGAGGGGAGGGAGGAAAGGAGGGAAGGTTGAATCGCCCGT
CGAGCATGGCCTGGGATGAAACCGCTGAGGTGTTGTATGTGAGTGAGACG
GGGGACAATGCCATTTCCAGCTATAAGCTTGGGTAGGAG
back to top

protein sequence of NO26G01370.1

>NO26G01370.1-protein ID=NO26G01370.1-protein|Name=NO26G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=508bp
MNYPARRWKGRIKATIMAAAFLGMSCSCCATASDGVRDGSSGNSGGPMQA
GGLSTTSPFQRQYVRRREDGDKDNNPLAISPSAPRPSAATAALDLVLPDG
QDIILAPDGGNDKSNLPDLHVLFLQQYGLTKGPGPLSLSTDKKNLYAVTG
EALYSFSTTPSSGKIDKIQEMRDGVVDRNGRKVEYFTGLTALTLSPDDQN
VYTVGTSVMPGVGGITVLKRNENGELSLVQQYRIDQRADIMDIEGMIGAN
SVAVSPDGKYTYVSSGGYYRDHNLLVFSRSPHTGNLTLIQNIDVYNTSAS
RVLPSTLVVAPDGKHVYVVGDNFAISTSVILVYGVEEDGTLTQTQEAGPF
RSTLLTSATFDPSGAFLYSTASLGNNLVWIFQRQPDGRLTTVIDPVILPS
LTSPSSGQRDEVPAPQGSYSSSLALEHPLLGPLLLVSVEKDNVVHAAVRQ
TGEGQQGRLIYLRGEIGGEGGKEGRLNRPSSMAWDETAEVLYVSETGDNA
ISSYKLG*
back to top
Synonyms
Publications