NO26G01330, NO26G01330 (gene) Nannochloropsis oceanica

Overview
NameNO26G01330
Unique NameNO26G01330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3388
Alignment locationchr26:426880..430267 +

Link to JBrowse

Properties
Property NameValue
DescriptionCheckpoint protein Rad24
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:426880..430267 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0006281DNA repair
GO:0006281DNA repair
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR004582Checkpoint_prot_Rad17_Rad24
Homology
BLAST of NO26G01330 vs. NCBI_GenBank
Match: EWM23144.1 (Checkpoint protein Rad24 [Nannochloropsis gaditana])

HSP 1 Score: 484.6 bits (1246), Expect = 7.700e-133
Identity = 326/633 (51.50%), Postives = 398/633 (62.88%), Query Frame = 0
Query:  349 PPLHTHPFSS-------SPSSLWIEKHRPLHSQDLSIPPKKVYEIRAWLRVAL-----STGGGPGVRDTKTGGTREKLLILRGPPGVGKSALVSVLAQEEECQVLAWTESTPLYVYQYQEGESGXXXXXXXXXXXXXXXXXPYVSQAKEFRMFLRGAAYRPLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGGRLLFVMEEMPYHASGRASSHFLAALSTFLSESVHPAIVMFTEEHEDRAGVGELEKFLSRGLLQAQGVQQIHVNPVTDANMRRILTRIAAAEGMGWAVDEVEGIVAFSRGDLRHAILTLQLQLQG------------RRSSLPSSSSILSHGAGLGKKWRKSTKRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYTSNFHAIGKVLHAKRRSPLYRDVEGKEGGQEARGRLAFVPEDVLGKCEMEVDGLATFIQAHCVPHFGGMNELSQALGFFSDADVLLARVFSTAFQRDQTDAAFPHEYVLSLLGRTVACTNVHPVGGKGGGGRGGEFRGMTAPRFYESLRQRREKGRRLTLLCEDYLREVGGGGREGGAPVTVRVTTAEMVRELIPFAKQMMGLAGPQK-----GGQTYGGGEGGRVEN 953
            PP H    S+          SLW EKHRP  + DLSIPPKKV E++ WL  AL      +G  PG    K GG  +KLL++RGP GVGKSA+V VLA+  E  VL WTE TP     ++  E                    YVSQA+ FR F+RGAAY PLE+                                         E+  R L VMEE+PYHA+GRA++HF AAL++FL+ SVHPA+V+FTEEHEDRAG G LE+ L+R LL A+GV+QIH+NP TDANMRRILT IA+AEG+G +  EVE IVA SRGDLRHAILTLQLQLQG             RS   +SSS L      G+K     +   XXXXXXXXXXXXXXXXXXXXXXXXXXXX Y S+FHA+GKVLHAKR   L    E ++G  + RGRL+FVPE+VL +CEME +GL+ F+Q H +  FG + EL++A+ FF+DADVLLARV+STAF RD+TDA FP EYVLS+LGRTVA +N HP GG+G G     FRGMTAPR++E LRQRRE GRRL LLC+DY+ +V   GR      ++R+T  EMV E++PFAKQ   +  PQ      G   Y G   G++E+
Sbjct:  279 PPRHNKEESTRGKSGALGAGSLWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAH--KGGG--QKLLVVRGPAGVGKSAMVQVLAEALELPVLRWTEETP-----WESREDAKRKKWEGDEMAMGGGGRQYVSQAEGFRAFVRGAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEGLGPSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRK----GEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYMSSFHALGKVLHAKR---LPESDESRKGEGDPRGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNRHPAGGQGTG-----FRGMTAPRYFEVLRQRRETGRRLGLLCQDYVGKVARAGRAS----SIRMTVGEMVDEMVPFAKQ---IGMPQDVREGIGVSMYEGWGEGKLED 883          
BLAST of NO26G01330 vs. NCBI_GenBank
Match: OEU15578.1 (P-loop containing nucleoside triphosphate hydrolase protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 156.0 bits (393), Expect = 6.200e-34
Identity = 150/571 (26.27%), Postives = 236/571 (41.33%), Query Frame = 0
Query:  363 LWIEKHRPLHSQDLSIPPKKVYEIRAWLRVALSTGGGPGVRDTKTGGTREKLLILRGPPGVGKSALVSVLAQEEECQVLAWTESTPLYVYQYQEGESGXXXXXXXXXXXXXXXXXPYVSQAKEFRMFLR--GAAYRPLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGGRLLFVMEEMPYHASGRASSHFLAALSTFLSESVHPAIVMFTEEHEDRAGVGELEKFLS-RGLLQAQGVQQIHVNPVTDANMRRILTRIAAAEGMGWAVDEVEGIVAFSRGDLRHAILTLQLQLQGRRSSLPSSSSILSHGAGLGKKWRKSTKRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYTSNFHAIGKVLHAKRRSPLYRDVEGKEGGQEARGRLAFVPEDVLGKCEMEVDGLATFIQAHCVPHFGGMNELSQALGFFSDADVLLARVFSTAFQRDQTDAAFPHEYVLSLLGRTVACTNVHPVGGKGGGGRGGEFRGMTAPRFYESLRQRREKGRRLTLLCEDYLREVGGGGREGGAPVTVRVTTAEMVRELIPFAKQMM 931
            +W+EK  P  S DL + PKKV EI +W++         G +  K     +KLLIL G PGVGKS  + ++A+E    +++W ES     Y  +  + G                    S    F  FL+  GA +  L++                                   XXXXXX      + ++E++P      A   F   LS  L  S  P +++F++  E +    +LE+ +    L        + +NPVT   M++IL+ IA  E   +  + +E I   S GD+RHA++TLQL   GR  S  ++++ L  G        + TK                                  S FH++GK+L+AKR S     + G +       RL F PE +L + ++ VDG   F++ H    F  + ELS A G FSDA  LL     +  + +   +AF  +Y  S+ GR VA TN+HP   K        FR  + P+ ++ +R     G++  +L +   R +                 +  V E +PF +Q++
Sbjct:    1 MWVEKFTPKSSSDLCVAPKKVKEIMSWIQ---------GCKKKK-----QKLLILVGSPGVGKSTTIRLIAKELNLPIVSWNES-----YNPRGEQEG--------VDSRSLFSVEQTSALDSFNEFLQQSGAGFGSLQL-----------------------------MSSSPDXXXXXXXXXXXXIILLEDLPNLHGKNAELRFRTYLSNHLQRSQLPTVLIFSDVSEGKHKPEDLERLIDPNDLYDNDRTTIMQINPVTKPKMKKILSTIAKREKYYFDSNFLEEIHHQSHGDIRHAVMTLQLHATGRSKSDCATTTTLHKGQN-----NRDTK---------------------------------LSAFHSLGKILYAKRAS-----INGVD------SRLTFDPEAILERSDLGVDGSLRFLEFHSPDFFTDITELSNAYGHFSDAAFLLGHDTVSGSRSNDNGSAF--KYASSIAGRAVANTNIHPAPNK--------FRQFSRPKVFDVIR----NGKQNQILVDQLSRRLS----------KCHCPLSNFVTESLPFVRQIV 442          
BLAST of NO26G01330 vs. NCBI_GenBank
Match: XP_002290840.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92592.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 154.8 bits (390), Expect = 1.400e-33
Identity = 158/566 (27.92%), Postives = 236/566 (41.70%), Query Frame = 0
Query:  361 SSLWIEKHRPLHSQDLSIPPKKVYEIRAWLRVALSTGGGPGVR------------------------DTKTGGT---REKLLILRGPPGVGKSALVSVLAQEEECQVLAWTESTPLYVYQYQEGESGXXXXXXXXXXXXXXXXXPYVSQAKEFRMFLR--GAAYRPLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGGRLLFVMEEMPYHASGRASSHFLAALSTFLSESVHPAIVMFTEEHEDRAGVGELEKFLSRGLLQAQGVQQIHVNPVTDANMRRILTRIAAAEGMGWAVDE-VEGIVAFSRGDLRHAILTLQLQLQGRRSSLPSSSSILSHGAGLGKKWRKSTKRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYTSNFHAIGKVLHAKRR---SPLYRDVEGKEG---GQEARGRLAFVPEDVLGKCEMEVDGLATFIQAHCVPHFGGMNELSQALGFFSDADVLLARVFSTAFQRDQTDAAFPHEYVLSLLGRTVACTNVHPVGGKGGGGRGGEFRGMTAPRFYESLRQRREKGRRLTLL 891
            S +WI+KH P  +++L I PKK+ E+++WL   +++                               D   G       K++IL G PG+GKSA+V VLA+E   ++L W +    YV      + G                 PY SQ   F  FL   G     LEV      XXXXXXXXXXX                         EG  +L  +EE+P   +  ++  F   +   +  +  P + +F++ +E +    +LE+ +   +L +  VQ + +  VT A M++ L  IA  EG+G    E +E +   S GDLRHAIL LQ +         S SS       +     K++KR +                               S FHA+GK+L+AKR+      Y   E + G     + RG L FVPE VL K +M      +FI  H    F  + +LS A    SDA   + R+        QTD  FP +Y  SL GR +A  N +P           +FR ++AP+ +E + ++RE   ++  L
Sbjct:  348 SEMWIDKHAPRTTKELCIAPKKIDEVKSWLVSHINSRQSKXXXXXXXXXXXXXXXXXXXXXXHTTPYDNPLGDNPPPDTKMMILIGSPGIGKSAMVKVLAREMNLEILMWNDDHVDYVDNSASFQIG---------CDGAGEYLPYQSQLASFEEFLNTGGLGMDSLEVAGLDSGXXXXXXXXXXXRTSLTSEKDGEY-------------EGSVIL--IEEIPNIYNAESAQAFRNIMERHIRRTNVPTVFVFSDVYEGKHKPEDLERLIPSSMLYSLLVQTLQIQAVTKAKMKKSLEAIAKEEGLGRLPTELMEELHLSSGGDLRHAILALQFR-------FGSGSSTGGRARAVDLDSTKASKRDVK-----------------------------LSTFHALGKLLYAKRKPRSQDPYSTTEKRTGISAWDDGRGPLDFVPEQVLEKTDMATSSAISFIAYHSPDFFTDIAQLSDAFDSISDAGEFMDRL-------GQTDGPFPMDYASSLGGRAIADANKNPA--------PSQFRHLSAPKVFEVMNKKRENETKMKQL 838          
BLAST of NO26G01330 vs. NCBI_GenBank
Match: GAX12204.1 (cell cycle checkpoint protein [Fistulifera solaris])

HSP 1 Score: 145.6 bits (366), Expect = 8.400e-31
Identity = 134/532 (25.19%), Postives = 207/532 (38.91%), Query Frame = 0
Query:  362 SLWIEKHRPLHSQDLSIPPKKVYEIRAWLRVALSTGGGPGVRDTKTGGTREKLLILRGPPGVGKSALVSVLAQEEECQVLAWTESTPLYVYQYQEGESGXXXXXXXXXXXXXXXXXPYVSQAKEFRMFLR--GAAYRPLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGGRLLFVMEEMPYHASGRASSHFLAALSTFLSESVHPAIVMFTEEHEDRAGVGELEKFLSRGLLQAQG-VQQIHVNPVTDAN-MRRILTRIAAAEGMGWAVDEVEGIVAFSRGDLRHAILTLQLQLQGRRSSLPSSSSILSHGAGLGKKWRKSTKRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYTSNFHAIGKVLHAKRRSPLYRDVEGKEGGQEARGRLAFVPEDVLGKCEMEVDGLATFIQAHCVPHFGGMNELSQALGFFSDADVLLARVFSTA-FQRDQTDAAFPHEYVLSLLGRTVACTNVHPVGGKGGGGRGGEFRGMTAPRFYESLRQRREKGRRLT 889
            SLW +++ P    DL +  KKV E+ AWL  ++S                 KLLIL G PG+GKS ++ +L +E    VL W ES   +   Y  G S                   Y S    F+ FL   G  Y PL +                                          +  R   +++++PY  +    + F       L +S  P I++ ++  E +     L  +L    L   G V  IHVNP T +  + +++ R+A   G+  +VD  E I     GD R A+ TLQ +  GR+    ++     HG  +  K                                        + FHA+GK+L+AKR+S               R  L F PE V+ + + E+  +  F++ H V  +  +++ S+A    SDA + L++   T  + +      FP  YV SL GRTVA TN HP   +        FR  +AP  Y+  R+RR+   +L+
Sbjct:   41 SLWSDEYAPTSINDLCVASKKVKEVTAWLDQSIS-----------------KLLILVGSPGIGKSTMIHLLLKERSWNVLEWNES---FSSLYTNGSS---------RNDSTLSSIEYQSPVDSFQQFLEEAGTGYHPLSI--------------------------------------SGETDSRRTAILLDDLPYLHTAETQARFRRLFQQHLEQSRIPTILIMSDVTEGKC--QHLTDYLDNRFLYNSGLVTIIHVNPPTRSRFVSKVVQRVATLAGISISVDAAEDIYDRVEGDARAALATLQFEYVGRKEGQRTAK---FHGGDMRDK--------------------------------------KLNAFHALGKLLYAKRKS--------TSASLYERPPLEFDPERVVEQSDTELSNVLAFLEFHSVDFYTDISDFSEATHCLSDAALWLSQSHLTGNYTKHSPSHVFPEAYVTSLAGRTVAWTNQHPAVSR--------FRQFSAPPIYQVARKRRDNQNQLS 446          
BLAST of NO26G01330 vs. NCBI_GenBank
Match: GAX21300.1 (cell cycle checkpoint protein [Fistulifera solaris])

HSP 1 Score: 135.6 bits (340), Expect = 8.700e-28
Identity = 140/582 (24.05%), Postives = 220/582 (37.80%), Query Frame = 0
Query:  354 HPFSSSPSSLWIEKHRPLHSQDLSIPPKKVYEIRAWLRVALSTGGGPGVRDTKTGGTREKLLILRGPPGVGKSALVSVLAQEEECQVLAWTESTPLYVYQYQEGESGXXXXXXXXXXXXXXXXXPYVSQAKEFRMFLR--GAAYRPLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGGRLLFVMEEMPYHASGRASSHFLAALSTFLSESVHPAIVMFTEEHEDRAGVGELEKFLSRGLLQAQG-VQQIHVN-PVTDANMRRILTRIAAAEGMGWAVDEVEGIVAFSRGDLRHAILTLQLQLQGRRSSLPSSSSILSHGAGLGKKWRKSTKRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYTSNFHAIGKVLHAKRRSPLYRDVEGKEGGQEARGRLAFVPEDVLGKCEMEVDGLATFIQAHCVPHFGGMNELSQALGFFSDADVLLARVFSTA-FQRDQTDAAFPHEYVLSLLGRTVACTNVHPVGGKGGGGRGGEFRGMTAPRFYESLRQRREKGRRLTLLCEDYLREVGGGGREGGAPVTVRVTTAEMVRELIPFAKQMM 931
            H  +    SLW +++ P    DL + PKKV E+ AWL                   +  KLLIL G PG+GKS ++ +L +E   +VL W ES   +      G S                   Y S    F  FL   G  Y P+ +                                          +      +++++PY  +    + F       L +S  P I++ ++  E +     L  +L    L   G V  IHVN P     + +++ R+ A  G+  +V   E I     GD R A+ TLQ +  GR+    ++     HG  +  K                                        + FHA+GK+L+AKR+S      E        R  L F PE V+ + + E+  +  F+  H V  +  +++ S+A    SDA + L++   T  + +      FP  YV SL GRTVA TN HP   +        FR  +AP  Y+ +R+RR+   +L    E  L          G    +  +TA    E++PFA++++
Sbjct:   35 HENTKRTRSLWSDEYAPTSINDLCVAPKKVKEVTAWL-----------------DQSNSKLLILVGSPGIGKSTMIHLLLKERNLKVLEWNES---FSSLNMNGSS---------RNGSTLSSIEYQSPVDSFHQFLEEAGTGYHPISI--------------------------------------SGETDSRSTAILLDDLPYLHTAETQARFRRLFQQHLEQSRIPTILIMSDVTEGKC--QHLTDYLDNRFLYNSGLVTIIHVNTPTRSRFVSKVVQRVTAFAGINISVGAAEDIYDRVEGDARAALATLQFEYVGRKKGQRTAK---FHGGVMRDK--------------------------------------KLNTFHALGKLLYAKRQSMSVSPHE--------RPPLEFDPEWVVEQSDSELSNVLAFLGFHSVEFYTDISDFSEATHCLSDAALWLSQSHLTGNYTKHSPSHVFPDAYVTSLAGRTVAWTNQHPAVSR--------FRQFSAPPIYQVVRKRRDNQNQLDQWRESLLNH--------GVIHDLANSTA-WSTEIVPFARKIL 481          
BLAST of NO26G01330 vs. NCBI_GenBank
Match: XP_002177804.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50618.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 124.8 bits (312), Expect = 1.500e-24
Identity = 127/532 (23.87%), Postives = 207/532 (38.91%), Query Frame = 0
Query:  357 SSSPSSLWIEKHRPLHSQDLSIPPKKVYEIRAWLRVALSTGGGPGVRDTKTGGTREKLLILRGPPGVGKSALVSVLAQEEECQVLAWTESTPLYVYQYQEGESGXXXXXXXXXXXXXXXXXPYVSQAKEFRMFLR--GAAYRPLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGGRL---LFVMEEMP-YHASGRASSHFLAALSTFLSESVHPAIVMFTEEHEDRAGVGELEKFLSRGLLQAQGVQQIHVNPVTDANMRRILTRIAAAEGMGWAVDEVEGIVAFSRGDLRHAILTLQLQLQGRRSSLPSSSSILSHGAGLGKKWRKSTKRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYTSNFHAIGKVLHAKRRSPLYRDVEGKEGGQEARGRLAFVPEDVLGKCEMEVDGLATFIQAHCVPHFGGMNELSQALGFFSDADVLLARVFSTAFQRDQTDAAFPHEYVLSLLGRTVACTNVHPVGGKGGGGRGGEFRGMTAPRFYESLRQRRE 883
            SS  ++LWI+++ P    D+ + PKKV E+R W++ A+                  KLLIL G PG+GKS ++  LA+E    +  W E+   +  QY    S                     S    F+ FLR  G  Y  L                                           ++G ++   + ++E +P  H S +     L   +  +  +  P +++F++  E +    +LE  +   LL +     + + P T  NM+R+L+ I  AE +       E +   S GDLR AI T Q +  G+  ++ ++                +T R                                 S FHA+GK+L+AKR +  ++D       ++ R  + F PE+VL    +E  G  +F++ H    F  ++ELS  L  FSD+ +L+          D +  +       SL GR VA  N HP        R  +FR ++AP+ +E  R RRE
Sbjct:   70 SSHDNALWIDRYNPQCIADVCVAPKKVQEVRQWIQSAMK-------------DHVHKLLILVGSPGIGKSTMIRCLAKENRWSISEWNET---FSNQYSALNSAMHSVDQQ-------------SSLSSFQEFLRQAGTGYHSL--------------------------------TFESSSNSSTKQDGSQISGSIILLESLPTQHESTQMRLREL--FTEHVRTTSVPTVLIFSDVLEGKHKREDLESLVDPNLLYSDLCLILQIQPCTKQNMKRVLSLIVRAERLSVPSSIYEDLHERSNGDLRSAITTFQYEAMGQSMTVKNTD---------------TTNR-----------------------------DRRLSPFHALGKLLYAKRVTGAHKDPLSWWKWKDDRPPIDFNPENVLEHSGIEQFGTLSFLEHHSPDFFSDISELSDTLATFSDSALLM----------DCSSISGSQNAAASLAGRAVAAFNRHP--------RANKFRQLSAPKIFEVNRNRRE 476          
BLAST of NO26G01330 vs. NCBI_GenBank
Match: CBJ49197.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 114.4 bits (285), Expect = 2.100e-21
Identity = 125/360 (34.72%), Postives = 167/360 (46.39%), Query Frame = 0
Query:  577 SVHPAIVMFTEEHEDRAGVGELEKFLSRGLLQAQGVQQIHVNPVTDANMRRILTRIAAAEGMG--------WAVDEVEG----------IVAFSRGDLRHAILTLQLQLQGR-----RSSLPSSSSILSHGAGLGKKWRKSTKRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYTSNFHAIGKVLHAKRRSPLYRDVEGKEG-----------GQEARGRLAFVPEDVLGKCEMEVDGLATFIQAHCVPHFGGMNELSQALGFFSDADVLLARVF--STAFQRDQTDAAFPHEYVLSLLGRTVACTNVHPVGGKGGGGRGGEFRGMTAPRFYESLRQRREKGRRLTLLCEDYLREVGG 901
            S  P I+ +++  E  +    LE+ LSR  L+  GVQ    NP+    +R+ L  + A EG+          A+    G          +++   GD+RHA+L LQ+ + GR                                  XXXXXXXXXXXXXXXXXXXXXXXXXXX  + + FHA+GK+L+AKR  P   D +G  G                G LAFVPEDVL +  ME+D    F+Q HCV  +   +ELSQ LG+FSDAD+  +R+F  S  +      A FP  Y  S+  R  A +N HP   +         R   AP+ +E  R R+E    L     D     GG
Sbjct:   84 SPSPVIICWSQASESASYQSRLEQVLSRETLRMPGVQITTCNPINATLLRQHLKGVLALEGVSDPKGTLVQSAITTCAGLCRDRASCRTLLSGPTGDIRHALLNLQMSVGGRGXXXXXXXXXXXGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTFLTQFHALGKLLYAKRVPP---DSDGAGGWPXXXXXXXXXXXXXXGPLAFVPEDVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADMFASRMFDSSRGYDGGGEQAVFPQRYAESIASRATAVSNRHPAKSR--------MRAFGAPKSFEMRRSRKEASGALRRFVGDAWDASGG 432          
BLAST of NO26G01330 vs. NCBI_GenBank
Match: PTQ48964.1 (hypothetical protein MARPO_0004s0213 [Marchantia polymorpha])

HSP 1 Score: 104.8 bits (260), Expect = 1.600e-18
Identity = 132/588 (22.45%), Postives = 222/588 (37.76%), Query Frame = 0
Query:  361 SSLWIEKHRPLHSQDLSIPPKKVYEIRAWLRVALSTGGGPGVRDTKTGGTREKLLILRGPPGVGKSALVSVLAQEEECQVLAWTESTPLYVYQYQEGESGXXXXXXXXXXXXXXXXXPYVSQAKEFRMFLRGAAYRPLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGGRLLFVMEEMPYHASGR-----ASSHFLAALSTFLSESVHPAIVMFTEEHEDRAGV-GELEKFLSRGLLQAQGVQQIHVNPVTDANMRRILTRIAAAEGMGWAVDEVEGIVAFSRGDLRHAILTLQLQLQGRRSSLPSSSSILSHGAGLGKKWRKSTKRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYTSNFHAIGKVLHAKRRSPLY---RDVEGKEGGQEARGRLAFV--PEDVLGKCEMEVDGLATFIQAHCVPHFG--GMNELSQALGFFSDADVLLARVFSTAFQR------DQTDAAFPHEYVLSLLGRTVACTNVHPVGGKGGGGRGGEFRGMTAPRFYESLRQRREKGRRLTLLCEDYLREVGGGGREGGAPVTVRVTTAEMVRELIPFAKQM 930
            S LW++KH P+  +DL++  +KV E+R W+           V+D     +R  +L+L GP GVGK+A+V  LA+  + ++L WT  TP    ++    +                  PY+S+  EF +F+  A                                                ++  +LL + +    H          + H LA  S F +  V    +   E  EDR  V  E+ + L RG     G +++  NP+T   + ++L ++   E     ++ +  I     GD+R A+ +LQ    G  S  P SS   +   G G  W   TK                                  S FHA+GK+LH KR + +     D E     +E R     +  PE VL +   E   +A F+Q + +        ++++    + SDAD LL    S   +R      D   +   +    S+  R V  +NVHP   +        ++ + AP  ++  RQR  K             E+      G  P T+ V+++ +  E+ P+ +++
Sbjct:   56 SRLWVQKHSPVSEKDLAVHKRKVAEVREWIE--------EQVQDPPESHSR--VLVLTGPAGVGKTAVVLTLAKSMDLELLEWTTPTPTLWNEFSHHAA---------------TGAPYMSKIDEFEVFIEKA------------------RKFVSLPTSSLSSSIRPQTKSSGLTKLGASKKRTKLLLIDDLPNVHDKAHRQRLSRTLHGLAVSSRFPTVVVITDAIGIAEYQEDRKVVTSEIIQALERG-----GAKKVAFNPITVNAILKVLKKVQLIEKSKAPLESLTSIAENCLGDIRQALASLQFLCLGLDSRAPRSS---NWDPGGGDAWSFETK-------LPSNDCKALTQSNVPETPTLGDRDLSLSLFHALGKILHNKRFNDVLAPTNDCEKLRLKEEYRRNPLKMAEPEVVLSQAYAETATVAAFLQENVLQFVDEEATDDVASISSYLSDADCLLGGEGSMRSRRGALNFSDVEPSQVAYAAASSVAARGVLFSNVHPAPPR--------WQSLRAPFLWQVERQRNRK-----------KIEISSDALSGMFP-TIHVSSSVLATEVYPYIQKL 565          
BLAST of NO26G01330 vs. NCBI_GenBank
Match: XP_008615999.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC30673.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 101.3 bits (251), Expect = 1.800e-17
Identity = 112/500 (22.40%), Postives = 179/500 (35.80%), Query Frame = 0
Query:  363 LWIEKHRPLHSQDLSIPPKKVYEIRAWLRVALSTGGGPGVRDTKTGGTREKLLILRGPPGVGKSALVSVLAQEEECQVLAWTESTPLYVYQYQEGESGXXXXXXXXXXXXXXXXXPYVSQAKEFRMFL-RGAAYRPLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGGRLLFVMEEMP------YHASGRASSHFLAALSTFLSESVHPAIVMFTEEHEDRAGVGELEKFLSRGLLQAQGVQQIHVNPVTDANMRRILTRIAAAEGMGWAVDEVEGIVAFSRGDLRHAILTLQLQLQGRRSSLPSSSSILSHGAGLGKKWRKSTKRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYTSNFHAIGKVLHAKRRSPLYRDVEGKEGGQEARGRLAFVPEDVLGKCEMEVDGLATFIQAHCVPHFGGMNELSQALGFFSDADVLLARVFSTAFQRDQTDAAFPH---EYVLSLLGRTVACTNVHP 853
            LW +K+ PL   +L + PKKV E+ AWL+            + KT G+ ++LL L GPPGVGKS +V   A      +  W +++ +       G S                    ++  ++F  FL R   Y  L                                               + + ++EE P       H   R   H L A      +  +P I+++++ HE +     L    S  ++ +     IH NPV    M++ L RIAA E +  +  ++  IV  S GDLRHA+ TLQ Q +   SS P                                                    ++ S+FH IG+VLH K                          +DVL +C +E   +   +  +C+  F  + ++  A   FS  DVLL   +     +D+++A + H   +   +L+ R +   N HP
Sbjct:  195 LWNDKYTPLTMDELCVHPKKVQEVVAWLQ--------QHAVERKTLGS-QRLLFLCGPPGVGKSTIVRAAAASLHLDIKQWKDTSGVRPL----GASSRS-----------------IALIEDFASFLERSQRYASLS-------------------------------------FASSASPSQQHVILVEEWPAFLDQHRHEVQRLLQHRLNA-----RDHRYPIIIIYSDVHETKVTPASLGAVFSTDVVASPLTHTIHCNPVASGMMKKYLGRIAARENVHVSSSQLSAIVEQSHGDLRHAVNTLQFQRKAASSSKPKED--------------------------------------------VRARDSFASDFHLIGRVLHPKDHH----------------------DDDVLRECTLESAHVLATVHHNCIDVFTEIEDVYAAFETFSATDVLLRSAY-----KDRSNANYYHATQQLGKTLVERAIRVANAHP 551          
BLAST of NO26G01330 vs. NCBI_GenBank
Match: POM76293.1 (Hypothetical protein PHPALM_6484 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 100.5 bits (249), Expect = 3.100e-17
Identity = 130/566 (22.97%), Postives = 216/566 (38.16%), Query Frame = 0
Query:  344 SSHPPPPLHTHPFSS--SPSSLWIEKHRPLHSQDLSIPPKKVYEIRAWLRVALSTGGGPGVRDT--KTGGTREKLLILRGPPGVGKSALVSVLAQEEECQVLAWTESTPLYVYQYQEGESGXXXXXXXXXXXXXXXXXPYVSQAKEFRMFL-RGAAYRPLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGGRLLFVMEEMPYHASGRASSHFLAALSTFLSESV-------HPAIVMFTEEHEDRAGVGELEKFLSRGLLQAQGVQQIHVNPVTDANMRRILTRIAAAEGMGWAVDEVEGIVAFSRGDLRHAILTLQLQLQGRRSSLP--SSSSILSHGAGLGKKWRKSTKRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYTSNFHAIGKVLHAKRRSPLYRDVEGKEGGQEARGRLAFVPEDVLGKCEMEVDGLATFIQAHCVPHFGGMNELSQALGFFSDADVLLARVF-----STAFQRDQTDAAFPHEYVLSLLGRTVACTNVHPVGGKGGGGRGGEFRGMTAPRFYESLRQRREKGRRLTLL 891
            S+ P  P  T   S   S   LW + + P    DL +  KKV EI  WL            R+T  ++G  +++LL L GPPG GKS  V  +A++    +  W +++      Y+                      P VS   +F  F+ R +AY  L +                                           GG+ + + E  P   S +  S +   L       V       +P + ++++    +  +  L +  SR ++ +     I +N V  A +++ L R+AA E     V++++ I+  S GDLRHA+  LQL  Q     +P  +S+S    G      +  S  + L                             + S+FH +GK+LH K    +++     E   ++     F  + +L    M +D +   +  + + +F  +++LS AL   S  +V++A  +     S AF+R +       +   S+L RTVA TN +P            FR +T PR Y + RQR    R   LL
Sbjct:   19 SARPDLPRKTRKLSQWLSQPKLWADLYAPKAVDDLCVNKKKVQEISEWLE-----------RNTTPQSGVFQKRLLFLCGPPGSGKSTAVRCIARQHGLIIKEWEDNSAAGKLNYER-------------MLREEFWTPQVSGVDDFSDFIHRSSAYAALPIATSRRASTIGRKRRLSSNHHVSDNLQKSSTI------------GGQFILI-ESWPQSWS-KDQSFYEEKLQQIYQHVVDPSGGCHYPVVCIYSDVQGSKIDLDHLSRKFSREVMHSPLTSVITINAVISAQLKKHLNRVAAQENCTTQVEDIQKIIDSSNGDLRHALNMLQLS-QSSTVKMPRVASTSTSKKGKKKNTAFDVSEMKAL-------------------SSTSSSARDPFLSDFHVVGKLLHGK----MFQGTSTNESKLKSM-TTDFDYDQILDASAMPLDRVLGLVHENSIAYFSQVDDLSGALELMSLCEVMVAESYSGVSSSEAFKRSR-------DVAQSILMRTVAVTNENPA--------PKAFRPITRPRTY-TARQRIVSRREEILL 505          
The following BLAST results are available for this feature:
BLAST of NO26G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23144.17.700e-13351.50Checkpoint protein Rad24 [Nannochloropsis gaditana... [more]
OEU15578.16.200e-3426.27P-loop containing nucleoside triphosphate hydrolas... [more]
XP_002290840.11.400e-3327.92predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAX12204.18.400e-3125.19cell cycle checkpoint protein [Fistulifera solaris... [more]
GAX21300.18.700e-2824.05cell cycle checkpoint protein [Fistulifera solaris... [more]
XP_002177804.11.500e-2423.87predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBJ49197.12.100e-2134.72conserved unknown protein [Ectocarpus siliculosus][more]
PTQ48964.11.600e-1822.45hypothetical protein MARPO_0004s0213 [Marchantia p... [more]
XP_008615999.11.800e-1722.40hypothetical protein, variant [Saprolegnia diclina... [more]
POM76293.13.100e-1722.97Hypothetical protein PHPALM_6484 [Phytophthora pal... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005940NSK005940Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01330.1NO26G01330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673131gene_7963Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100043g4gene7279Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01330.1NO26G01330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01330 ID=NO26G01330|Name=NO26G01330|organism=Nannochloropsis oceanica|type=gene|length=3388bp
ACAGGCACCGAGGCAAGCTTATTGAGGCATGGCAATGGCGGCTGGTTGCG
TGATTGAGCTTTCCTCCTCCTTCTCCTCCGGCTCCTCGTCTTCGTCTGAA
GAGAGTCATGACCTCGTGCAGCATATGACGAGGCACTATCAAAAGAAGCC
CCGAGTATGCTTGCGACGGCCGCGGCAGGGGCAGCAGCAGAAGCAGCAGC
AGCAGCTGATGCCGCAGCAGCAAATCAAGAAGATCAAGACAAAGAAGACG
ACATCAAAAAAGCGCGTGCACCGAGCGCTGGCCTGTAGTAGCAGCAGTAG
CGAGGAGGAAGAGGTGGAGGAGGATGAGGCGGAGGGGTGTAAGGGAAATA
AAGTAAAGGAGGAGGGTAAAGCACGCCGTTGCAGAAAGAGTAAGTGGGCG
CTCAGGGAAAAAAGGAAGAAGATACTGCTGCTCGACGAGGAGGAGAAGGA
GAAGGATGAGGAAAAGGAGGAGGTTGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAAAAAGAGGAACAGCAACAGCGAAAAAGGCGACAAAACGGTAAG
AGTAAACCGGGGTCCAACAAAAGGAGACAGGGGAAAATGCCGAAGAGCGC
ATCACGTTCATTTGAAGTTGATAAGGAAGAAGAAGATGATGAAGAAGAGG
AAGAGGAGGACGAGGAAGAGGAGGCGGAGGAGGAGTTAGAATTTGTCTTA
AGCAGTGACGATGAGGATTGTGCCTCATGGCGGAAGCGACTGTTGATCCA
ACGTCGCCGTTTCCGCAATGCCATAGGCACCACCGCTGCTGCCTCGTCCT
CATTCACTGGCAGTAGTGACAGTAGTGACAGTAGGAGGTGCAGAAGCGGT
AGGACCAAGCGGTCTAAGTTGGAGGGGGGAGCTGCGGCTTCCAGCCATGC
TGCTGGTGTCGGTGGTGGAGATGGCCGAGATGATGGAGGCGGTATATTGC
AATTTGTCGCCGGCAAGGCCGCGCGCAGAAAGATGAGGCCGTTACACTCC
TCCTCCTCTGCATCCTCCTTCCACTCCCTCTCCTCGCGGCTACCAATAGT
GCCCCTTTCCTCCCATCCTCCCCCTCCCTTACACACACACCCCTTTTCCT
CCTCCCCCTCCTCCCTCTGGATCGAGAAGCACCGCCCCCTACACTCCCAA
GACCTCTCAATTCCCCCCAAAAAGGTCTACGAAATCCGCGCCTGGCTCCG
CGTGGCCCTTTCCACCGGCGGGGGCCCTGGTGTCCGCGACACGAAGACAG
GAGGGACGCGGGAAAAGCTTCTAATCTTGAGAGGACCCCCAGGGGTGGGC
AAGAGTGCCCTGGTCTCGGTGTTGGCGCAGGAGGAGGAATGTCAGGTTTT
GGCGTGGACGGAAAGCACGCCTCTGTATGTTTATCAGTATCAGGAAGGGG
AGAGCGGGGGAGGAGACGAAAAGGGAGGGGGAGGGAAAGGAGGAAGAAAG
GAAGGAGGGCCATATGTATCACAGGCGAAGGAATTTCGGATGTTTCTGAG
AGGGGCTGCTTACAGGCCTTTGGAGGTGGAGGCGACAGCAGCAGCCGGAG
CAGCAGGAGCAGTTGCAAAGGGGACACAAAAGGAGGAGGGCAAAAGACGG
CATCAAGGAGGAGGGGCTGGAGCAGGAGCAGAAGCAGAAACAGGTGGTGG
AGAAGAAGGGGGTCGCTTGCTGTTCGTCATGGAGGAAATGCCTTACCACG
CATCGGGGCGCGCGTCCTCTCACTTCCTAGCGGCGCTGTCGACCTTCCTC
TCGGAGTCGGTCCACCCGGCCATCGTCATGTTCACGGAAGAGCACGAGGA
TAGAGCAGGGGTCGGTGAGCTGGAGAAGTTCCTGTCCCGAGGACTGCTTC
AGGCGCAGGGCGTGCAGCAGATTCACGTCAATCCAGTCACAGACGgcaag
ttggaaggggggggtggaagggagggagggagtgattgaactttaataaa
ggaaagagaaaaaatgttgtgcttataccagaagtctgatggtgtatgaa
cgcttccctccccttcaagCCAACATGCGCAGGATTCTGACCCGTATCGC
CGCGGCGGAGGGCATGGGCTGGGCAGTGGACGAGGTGGAGGGCATTGTGG
CGTTCAGCAGAGGAGACCTCCGTCACGCTATCCTCACGCTGCAGCTACAG
CTACAGGGTCGTCGATCCTCCCTCCCTTCCTCCTCTTCGATTTTGTCCCA
TGGGGCAGGGCTGGGAAAGAAGTGGAGGAAAAGTACAAAAAGGGGTTTAG
GGGAGGGAAGGAGAGAGATGAGGATGGGGAGGAAGGAGGGTGAGAAGGAG
GAGGAGGAGAAGGAAGAGAAGCAACAGAAAGATGCCTATACGTCCAATTT
CCATGCGATCGGCAAGGTCCTCCACGCCAAGCGGCGTAGCCCTCTTTATC
GGGACGTGGAAGGCAAGGAGGGAGGGCAGGAAGCGAGGGGCAGGCTGGCA
TTCGTTCCGGAAGACGTGCTTGGGAAGTGTGAGATGGAGGTGGATGGTCT
GGCGACGTTCATTCAGGCGCATTGCGTGCCCCACTTTGGGGGCATGAACG
AGCTGAGTCAGGCGTTGGGATTCTTCTCGGACGCAGACGTGTTGCTGGCG
AGGGTCTTCAGCACGGCTTTCgtgagacgagggagggagggagggagggg
gggcggaagtgggggaaggaaagagggagagagaggaagggaaaaggttg
tgtttgtaatgtcaagttgtttgtaatatgcatacacttcatcgtttacc
ttgaagtactcgtatactgatcctcctccctccctccctccctccttccc
ttctttcctcgcaagCAACGAGACCAGACCGACGCGGCCTTTCCCCACGA
GTATGTGCTCTCCCTCTTGGGCCGCACTGTTGCCTGTACGAATGTGCACC
CCGTCGGCGGCAAGGGTGGAGGAGGACGAGGTGGAGAATTTCGAGGAATG
ACTGCCCCGAGATTTTATGAGAGTCTGAGGCAGAGGAGGGAGAAGGGGAG
GAGGTTGACATTGCTTTGTGAGGATTATCTCAGGGAGGTAGGGGGCGGGG
GGCGGGAGGGAGGGGCGCCTGTAACGGTGAGGGTGACAACGGCAGAGATG
GTGCGGGAGTTGATTCCGTTCGCCAAACAGATGATGGGACTGGCGGGCCC
TCAAAAGGGAGGACAGACGTATGGTGGGGGAGAGGGGGGAAGGGTAGAGA
ATGATGAGGGAGGGGCGGAGTCTTTGGCAAGTGCCTTAAGTTTTCTTCGG
CTTTTCAACCAGCGAGTGTGTCCTTTTGAGGGACGCGGCAGCGGAGTGGA
AGGAGGAGCTGGAGGAGCGAGGGAGGGAGGGGAAGAAGTGGGACCTCAGC
TGTCGGATTTGGGGGTAGATGATATTGAGGAGGATTGA
back to top

protein sequence of NO26G01330.1

>NO26G01330.1-protein ID=NO26G01330.1-protein|Name=NO26G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1014bp
MAMAAGCVIELSSSFSSGSSSSSEESHDLVQHMTRHYQKKPRVCLRRPRQ
GQQQKQQQQLMPQQQIKKIKTKKTTSKKRVHRALACSSSSSEEEEVEEDE
AEGCKGNKVKEEGKARRCRKSKWALREKRKKILLLDEEEKEKDEEKEEVE
EEEEEEEEEEKEEQQQRKRRQNGKSKPGSNKRRQGKMPKSASRSFEVDKE
EEDDEEEEEEDEEEEAEEELEFVLSSDDEDCASWRKRLLIQRRRFRNAIG
TTAAASSSFTGSSDSSDSRRCRSGRTKRSKLEGGAAASSHAAGVGGGDGR
DDGGGILQFVAGKAARRKMRPLHSSSSASSFHSLSSRLPIVPLSSHPPPP
LHTHPFSSSPSSLWIEKHRPLHSQDLSIPPKKVYEIRAWLRVALSTGGGP
GVRDTKTGGTREKLLILRGPPGVGKSALVSVLAQEEECQVLAWTESTPLY
VYQYQEGESGGGDEKGGGGKGGRKEGGPYVSQAKEFRMFLRGAAYRPLEV
EATAAAGAAGAVAKGTQKEEGKRRHQGGGAGAGAEAETGGGEEGGRLLFV
MEEMPYHASGRASSHFLAALSTFLSESVHPAIVMFTEEHEDRAGVGELEK
FLSRGLLQAQGVQQIHVNPVTDANMRRILTRIAAAEGMGWAVDEVEGIVA
FSRGDLRHAILTLQLQLQGRRSSLPSSSSILSHGAGLGKKWRKSTKRGLG
EGRREMRMGRKEGEKEEEEKEEKQQKDAYTSNFHAIGKVLHAKRRSPLYR
DVEGKEGGQEARGRLAFVPEDVLGKCEMEVDGLATFIQAHCVPHFGGMNE
LSQALGFFSDADVLLARVFSTAFQRDQTDAAFPHEYVLSLLGRTVACTNV
HPVGGKGGGGRGGEFRGMTAPRFYESLRQRREKGRRLTLLCEDYLREVGG
GGREGGAPVTVRVTTAEMVRELIPFAKQMMGLAGPQKGGQTYGGGEGGRV
ENDEGGAESLASALSFLRLFNQRVCPFEGRGSGVEGGAGGAREGGEEVGP
QLSDLGVDDIEED*
back to top
Synonyms
Publications