NO26G01300, NO26G01300 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01300 vs. NCBI_GenBank
Match: EWM23172.1 (retinaldehyde binding protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 394.0 bits (1011), Expect = 4.500e-106 Identity = 200/289 (69.20%), Postives = 230/289 (79.58%), Query Frame = 0 Query: 17 PSSPPPFTFHSNIEGGQPLSVSTANSSFDEGVTPLLNLTDEEATILVDRMRVAMQADDASL-PQATRVGSACPPPPPLPRGFLLQCLRSRSGVYDEALMVARNFLAFRRGAGWPLRLKAKDVMGGPLESGAHWILPGRDKEGRGIFVFNVGKIDTRKASLEKYQQVGAYLVERFTRDEEMQRTGLVMIVNLASVPFGLCRALVSLKDAKRGIRMWQDAFPCKLKRIYVVGGSLWLLRAMRLVVAMLGKKLQNRVRVLPHLEALHRDVDRDNIPPCLGGSLERFEWGEWV 305 P F S+ G PL S ANSSFD+ V PL +L+D EA LV RMR ++ D+ L A + SA PLP GFLLQCLRSRSGVYDEALMVARNFLAFRRGAGWPLRL A+DV GGPLESGAHWILPG+DKEGRG+FVFNVG+IDTR SLE+YQQ+GAYLVER TR+EE+QRTGLVM+VN+A VP GL R+L+SL DAKRG+RMWQDAFP KLKRIYVVGGS WLL+A+RLVVAMLGKKL+ RVRVLPH EAL D+D + +PPCLGG LE F+W +W+ Sbjct: 67 PKPSDEFPSLSSANSGTPL--SHANSSFDDDVQPLPHLSDAEADALVGRMRSDLRGDERCLETDACHITSA-----PLPDGFLLQCLRSRSGVYDEALMVARNFLAFRRGAGWPLRLTARDVSGGPLESGAHWILPGKDKEGRGLFVFNVGRIDTRLGSLERYQQMGAYLVERLTREEEVQRTGLVMVVNMAHVPLGLYRSLISLTDAKRGVRMWQDAFPSKLKRIYVVGGSRWLLQAVRLVVAMLGKKLRKRVRVLPHQEALQEDIDAEQLPPCLGGRLEGFDWAQWL 348
BLAST of NO26G01300 vs. NCBI_GenBank
Match: CEL92011.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 150.6 bits (379), Expect = 8.700e-33 Identity = 84/236 (35.59%), Postives = 131/236 (55.51%), Query Frame = 0 Query: 90 PPPLPRGFLLQCLRSRSGVYDEALMVARNFLAFRRGAGWPLRLKAKDVMGGPLESGAHWILPGRDKEGRGIFVFNVGKIDT--------RKASLEKYQQVGAYLVERFTRDEEMQRTGLVMIVNLASVPFGLCRALVSLKDAKRGIRMWQDAFPCKLKRIYVVGGSLWLLRAMRLVVAMLGKKLQNRVRVL--------PHLEALHRDVDRDNIPPCLGGSLERFEWGEWVAKVAA 310 P L FL +CL R EA VARNF FR AGWP R++ + + L SG HWILP RD +GR + V+N +D+ ++ S+E Q++G +L+E T D + G+ ++ ++ + GL R +L D KRG+ MW+++FPCKL+R+YV+ S + + V+ +L KK+++RV + E V +D++PP LGG+L RF+W V ++ A Sbjct: 43 PLVLSDSFLRKCLMCRDWHQQEAATVARNFSRFRDSAGWPYRIECTEDVKAALLSGLHWILPTRDIDGRPMLVYNGKVLDSINARITPQQRISIESLQKMGCFLMELLTDDPACHQHGVALVFDVGGITLGLLRHF-TLADIKRGVMMWKESFPCKLRRVYVLRASPVISSIVHFVLGLLAKKIRDRVHFVKTDSPDDNQSDEPFWLFVRKDSVPPSLGGTL-RFDWPAEVERIIA 276
BLAST of NO26G01300 vs. NCBI_GenBank
Match: CBN75089.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 110.9 bits (276), Expect = 7.600e-21 Identity = 73/218 (33.49%), Postives = 110/218 (50.46%), Query Frame = 0 Query: 98 LLQCLRSRSGVYDEALMVARNFLAFRRGAGWPLRLKAKDVMGGPLESGAHWILPGRDKEGRGIFVFNVGKIDTRKASLEKYQQVGAYLVERFTRDEEMQRTGLVMIVNLASVPFGLCRALVSLKDAKRGIRMWQDAFPCKLKRIYVVGGSLWLLRAMRLVVAMLGKKLQNRVRVLPHLEALHRD-----VDRDNIPPCLG----GSLERFEWGEWVAK 307 L QCL + A+ V F FR GW L L A + + PL S H + RD+ GRG+ F+ GK+D KA Y ++ Y+++ +DEE+Q GLV++V+ V FGL R +L D KRG+RM AFP K+K I ++ + + A+++ + +L K++ RV + A D +IP LG + R W EWV + Sbjct: 612 LHQCLEYANYDMAGAIKVCSTFCKFRLQEGWDLVLSAPE-LETPLRSRVHTLTTNRDRTGRGVLTFSPGKLDMDKAPPAAYHKMLCYVLQEVIKDEELQTKGLVLLVDARGVGFGLLRRF-TLADYKRGLRMLGGAFPAKVKAIRILHLNRVIGMALKIAMPLLSAKMRARVEFVTDERASDGSFTKELADPSSIPVELGIKGTWTGSRDFWDEWVVR 827
BLAST of NO26G01300 vs. NCBI_GenBank
Match: OLQ14269.1 (Alpha-tocopherol transfer protein [Symbiodinium microadriaticum]) HSP 1 Score: 100.9 bits (250), Expect = 7.900e-18 Identity = 57/182 (31.32%), Postives = 101/182 (55.49%), Query Frame = 0 Query: 128 WPLRLKAKDVMGGPLESGAHWILPGR------DKEGRGIFVFNVGKIDTRKASLEKYQQVGAYLVERFTRDEEMQRTGLVMIVNLASVPFGLCRALVSLKDAKRGIRMWQDAFPCKLKRIYVVGGSLWLLRAMRLVVAMLGKKLQNRVRVL--PHLEALHRD-VDRDNIPPCLGGSLERFEW 301 W + + A +V L++G HW+LPG+ ++ VFN+ K+D +E+YQ++ +L+ER T ++Q G+ +I++ V F +++ L+D KRG+ W AFPC+L+RI+++ L + LV L K++NR+ + L+ + D VD +P LGG+ + F+W Sbjct: 6 WAMSIPASEV-SRALKTGLHWLLPGKKDSKDPNEFAAACLVFNMAKLDPEACPIEEYQKLSLFLIERATDTLDVQTRGVALIIDFRGVQFTKLWSVLRLEDIKRGLGCWVGAFPCRLRRIWILDAPLPVRALTSLVKKFLTPKVRNRIDFVAPKDLQRIREDFVDCIVLPESLGGT-DPFDW 185
BLAST of NO26G01300 vs. NCBI_GenBank
Match: XP_001848586.1 (conserved hypothetical protein [Culex quinquefasciatus] >EDS28629.1 conserved hypothetical protein [Culex quinquefasciatus]) HSP 1 Score: 88.2 bits (217), Expect = 5.300e-14 Identity = 58/217 (26.73%), Postives = 108/217 (49.77%), Query Frame = 0 Query: 97 FLLQCLRSRSGVYDEALMVARNFLAFRRGAGWPLRLKAKDVMGGPLESGAHWILPGRDKEGRGIFVFNVGKIDTRKASLEKYQQVGAYLVERFTRDEEMQRTGLVMIVNLASVPFGLCRALVSLKDAKRGIRMWQDAFPCKLKRIYVVGGSLWLLRAMRLVVAMLGKKLQNRVRVLPH-LEALHRDVDRDNIPPCLGGSLERFEWGEWVAKVAAHER 313 FLL+ LR++ D+A + + + + ++ M LE +LP RD GR I+VF V K D K ++ + +E R+ E+Q GLV++++++ + F R L S AK+ + + Q+AFP + K +V+ + + ++ L K++ R+ + H L +LH+ + +D +P GG+L F+ EW + +E+ Sbjct: 86 FLLRFLRAKKFDVDKAFKMIQKYYKMKDEYPEIFKVSPPSEMKFMLEMQIQCMLPKRDDSGRQIYVFRVEKCDPYKIPVDYVFRSNVLALEDAVRNPEVQIGGLVVLLDMSGLGFAHARYL-SPHLAKKTVEVVQEAFPMRFKAFHVLHEPFYFDAILAVLKPFLKDKIRRRIHLHGHNLNSLHKYISKDFLPAEYGGTLPPFDNTEWRTAILENEQ 301
BLAST of NO26G01300 vs. NCBI_GenBank
Match: XP_002608775.1 (hypothetical protein BRAFLDRAFT_289251 [Branchiostoma floridae] >EEN64785.1 hypothetical protein BRAFLDRAFT_289251, partial [Branchiostoma floridae]) HSP 1 Score: 85.5 bits (210), Expect = 3.400e-13 Identity = 55/198 (27.78%), Postives = 101/198 (51.01%), Query Frame = 0 Query: 98 LLQCLRSRSGVYDEALMVARNFLAFRRGAGWPLRLKAKDVMGGPLESGAHWILPGRDKEGRGIFVFNVGKIDTRKASLEKYQQVGAYLVERFTRDEEMQRTGLVMIVNLASVPFGLCRALVSLKDAKRGIRMWQDAFPCKLKRIYVVGGSLWLLRAMRLVVAMLGKKLQNRVRVL-PHLEALHRDVDRDNIPPCLGGS 295 LL+ LR+R ++A + + +R + + G LE+G H LPGRD++GR + + +GK D + S + +V E+ ++E+ Q G+ MI +LA + F + + AK+ + DAFP ++K I+++ + ++ + +K++NR+ + P E L + VDRD +PP GG+ Sbjct: 60 LLRFLRARYFDVEQAFKLLEKYHKWRAQSPEICSNMRPSSVRGLLEAGYHAALPGRDQDGRKVMFYRIGKWDPYQFSAYEVFRVSMISSEKIIQEEDTQVHGIAMIADLAGLSFSHAYQ-IGPRVAKKIGSITTDAFPIRVKEIHLLNQPMLFDAIFAIIKPFMSEKMRNRIHLHGPKTETLLQYVDRDALPPEYGGT 256
BLAST of NO26G01300 vs. NCBI_GenBank
Match: XP_005831150.1 (hypothetical protein GUITHDRAFT_153080 [Guillardia theta CCMP2712] >EKX44170.1 hypothetical protein GUITHDRAFT_153080 [Guillardia theta CCMP2712]) HSP 1 Score: 85.1 bits (209), Expect = 4.500e-13 Identity = 41/125 (32.80%), Postives = 74/125 (59.20%), Query Frame = 0 Query: 181 VGAYLVERFTRDEEMQRTGLVMIVNLASVPFGLCRALVSLKDAKRGIRMWQDAFPCKLKRIYVVGGSLWLLRAMRLVVAMLGKKLQNRVRVLPH-LEALHRDVDRDNIPPCLGGSLERFEWGEWV 305 +G++L+++ E + + G+V +++L V + + D KRGI MW+DAFPCKLK+IY+V + L + + ++L K++ RV ++ + LH D+D +PP LGG+ E +W ++ Sbjct: 1 MGSFLMQKAIEKENIVKNGIVCVLDLQGVDLSITTKF-GIADVKRGILMWKDAFPCKLKKIYLVNMGIILSTIVAMAKSILSSKIRERVVLVDKTFQQLHADIDSSRLPPSLGGNFE-LDWESYI 123
BLAST of NO26G01300 vs. NCBI_GenBank
Match: ODM87849.1 (Retinaldehyde-binding protein 1 [Orchesella cincta]) HSP 1 Score: 83.6 bits (205), Expect = 1.300e-12 Identity = 58/172 (33.72%), Postives = 89/172 (51.74%), Query Frame = 0 Query: 136 DVMGGPLESGAHWILPGRDKEGRGIFVFNVGKIDTRKASLEKYQQVGAYLVERFTRDEEMQRTGLVMIVNLASVPFGLCRA-LVSLKDAKRGIRMWQDAFPCKLKRIYVVGGSLWLLRAMRLVVAMLGKKLQNRVRVLPH---LEALHRDVDRDNIPPCLGGSLERFEWGEW 304 DV+G + G +L RDK GR I N K D + S E+ +G YL+ER RD++M G+V I + + + GL A L +L R I + ++P K+K IY V ++L+ +LV L K + R+++ E LH ++ D +P C+GG LE E +W Sbjct: 23 DVIGQLKKYGVVGMLKARDKLGRRILFLNAEKWDPDEISSEQMTIMGLYLLERGLRDDDMMTNGIVFIHSCSGM--GLKHAKLYTLHKTLRIINICWYSYPLKVKGIYYVNVPIYLVYLYKLVKPFLTSKFKERLKLSTKDNTFETLHENLSPDLLPKCVGGILEDEEAFDW 192
BLAST of NO26G01300 vs. NCBI_GenBank
Match: CRK93457.1 (CLUMA_CG006993, isoform A [Clunio marinus]) HSP 1 Score: 82.8 bits (203), Expect = 2.200e-12 Identity = 55/216 (25.46%), Postives = 105/216 (48.61%), Query Frame = 0 Query: 97 FLLQCLRSRSGVYDEALMVARNFLAFRRGAGWPLRLKAKDVMGGPLESGAHWILPGRDKEGRGIFVFNVGKIDTRKASLEKYQQVGAYLVERFTRDEEMQRTGLVMIVNLASVPFGLCRALVSLKDAKRGIRMWQDAFPCKLKRIYVVGGSLWLLRAMRLVVAMLGKKLQNRVRVLPH-LEALHRDVDRDNIPPCLGGSLERFEWGEWVAKVAAHE 312 FLL+ LR++ D+A + + + + + + + LE +LP +D GR ++VF V K D K +E + +E RD E Q GLV+++++A + F R L S AKR + + Q+AFP + K +++ ++ + ++ L K++ R+ + L +L++ + RD +P GG+ F+ W ++ +E Sbjct: 378 FLLRFLRAKKFDVDKAFKMIQKYYWMKEHSPELFYVSPPSDLKSMLEMQIQCMLPQKDNHGRQVYVFRVEKCDPYKVPVEHVFRSNVLALEDAIRDPETQIGGLVVLLDMAGLGFAHARYL-SPHLAKRTVEVVQEAFPMRFKAFHILHEPFYMDAILSVLKPFLKDKIRRRIHCHGNDLNSLYKHIPRDCLPSEYGGTQPPFDNSIWRQRILNNE 592
BLAST of NO26G01300 vs. NCBI_GenBank
Match: XP_005618409.1 (retinaldehyde-binding protein 1 isoform X1 [Canis lupus familiaris]) HSP 1 Score: 82.0 bits (201), Expect = 3.800e-12 Identity = 54/211 (25.59%), Postives = 100/211 (47.39%), Query Frame = 0 Query: 97 FLLQCLRSRSGVYDEALMVARNFLAFRRGAGWPLRLKAKDVMGGPLESGAHWILPGRDKEGRGIFVFNVGKIDTRKASLEKYQQVGAYLVERFTRDEEMQRTGLVMIVNLASVPFGLCRALVSLKDAKRGIRMWQDAFPCKLKRIYVVGGSLWLLRAMRLVVAMLGKKLQNRVRVL-PHLEALHRDVDRDNIPPCLGGSLERFEWGEWVAK 307 F L+ +R+R A + R ++ FR + + + +E+G +LP RDK GR + +FN+ D+ + + ++ Q +++E+ +EE Q G +I N L D ++ + M QD+FP + K I+ + + +V +L KL RV V L +++D D +P GG+L +++ G+ VA+ Sbjct: 135 FFLRFIRARKFHVGRAYELLRGYVNFRLQYPELFDSLSLEAVRCTVEAGYPGVLPSRDKYGRVVMLFNIENWDSEEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAAGL-RASDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNMVKPLLKNKLLQRVFVHGDDLSGFFQEIDEDILPADFGGTLPKYD-GKVVAE 343 The following BLAST results are available for this feature:
BLAST of NO26G01300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01300 ID=NO26G01300|Name=NO26G01300|organism=Nannochloropsis oceanica|type=gene|length=2577bpback to top protein sequence of NO26G01300.1 >NO26G01300.1-protein ID=NO26G01300.1-protein|Name=NO26G01300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=336bpback to top Synonyms
Publications
|