NO26G01270, NO26G01270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01270 vs. NCBI_GenBank
Match: ORY40481.1 (hypothetical protein BCR33DRAFT_719457 [Rhizoclosmatium globosum]) HSP 1 Score: 117.9 bits (294), Expect = 8.600e-23 Identity = 72/226 (31.86%), Postives = 116/226 (51.33%), Query Frame = 0 Query: 72 VVCVSLVVSHLLMVLFIAFHDISGRWDKYSLKYQ--RSSWRTYAQHAPSFFFDVGVLLAPALLVFGYAYDAVLYEPLLPHGDWQQDGVRVAALLGGATINNVINRLWAMGVHWLMHESKILYRAVHKRHHCQIRDFCALSAWQDSTLEFVLMEVFGVFLFAQLFNPLPWHFHVLFALINGLGAAIDHSAFYIPGTLIDGRYHWDHHLRIDYNFSELEFLDSMFGTL 296 ++C L VS+ AFHD++G Y L+ R +W Y + P ++ VL + + A + +P G QD + + I VI + W GVH+ +H + LY+ +HK HH + +LSAW D+ E+++ME+ G ++ L P+ + ++ + G ++++HS FYI TL D RYHW HH+ + NF+E + LD MFGTL Sbjct: 8 LICSCLWVSYFATGFAFAFHDVNGALQAYDLRKNKPRRTWAHYLANMPKQLSNLFVLFPVCMHILVEARADTITKPFRDIG--VQDAINL-------VIGYVIQQSWLFGVHYALH-TPFLYKRIHKYHHVPLAYVHSLSAWTDAYFEYIVMEL-GSYVAMILLAPMHYSILAVYFVYLGFSSSVEHSGFYINATL-DSRYHWKHHVLPNCNFAEWDVLDWMFGTL 221
BLAST of NO26G01270 vs. NCBI_GenBank
Match: KOO27544.1 (hypothetical protein Ctob_009639 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 111.7 bits (278), Expect = 6.200e-21 Identity = 74/253 (29.25%), Postives = 122/253 (48.22%), Query Frame = 0 Query: 62 EMERAVWFSGVVCVSLVVSHLLMVLFIAFHDISGRWDKYSL---KYQRSSWRTYAQHAPSFFFDVGVLLAPALL-VFGYAYDAVLYEPLLPHGDWQQDGVRVAALLGGATINNVINRLWAMGVHWLMHESKILYRAVHKRHHCQIRDFCALSAWQDSTLEFVLMEVFGVFLFAQLFNPLPWHFHVLFALINGLGAAIDHSAF---------YIPGTLIDGRYHWDHHLRIDYNFSELEFLDSMFGTLYTHHHP 302 E+ + +G C+ +VV+HL +IA++D+SGRW +Y+L ++ + Y A +F DV +++ P L + D ++ Q D V + L I R+WA H ++H + ++Y+ HKRHH ++ A AW D +E+ +ME+ G+ LF P FH +F + AA DHS F + D YH+ HH N++E+E++D +FGT +T P Sbjct: 14 ELPSPLALAGSFCIVMVVTHLATAGYIAWNDLSGRWSQYTLCKKSDRKRHPKLYVDGALNFLKDVTLIMLPGLTWICQVRGDDIV--------SAQDDNVLIGVL--KICAGYTIGRIWAAFAHRILH-TALMYKHFHKRHHMRVDQLVATGAWLDHPVEYAVMELPGLLCPLVLF-PTRLAFHYMFFFFHAFSAATDHSGFTFTKENGAGWFFRNFFDSEYHYYHHATSTVNYAEMEWIDYLFGTHHTQVLP 254
BLAST of NO26G01270 vs. NCBI_GenBank
Match: XP_002183632.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44814.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 99.8 bits (247), Expect = 2.400e-17 Identity = 71/243 (29.22%), Postives = 112/243 (46.09%), Query Frame = 0 Query: 66 AVWFSGVVCVSLVVSHLLMVLFIAFHDISGRWDKYSLKYQRSS-----WRTYAQHAPSFFFDVGVLLAPAL-LVFGYAYDAVLYEPLLPHGDWQQDGVRVAALLGGATINNVINRLWAMGVHWLMHESKILYRAVHKRHHCQIRDFCALSAWQDSTLEFVLMEVFGVFLFAQLFNPLPWHFHVLFALINGLGAAIDHSAFYIPGTL---IDGRYHWDHHLRIDYNFSELEFLDSMFGTLYTHH 300 A W + + L++SH + V + + D SG+W+ Y L RS Y F D+ +L P + F D + + P + LL G + ++WA VH+ +H L+ H+RHH ++ A +AW DS +E+ +ME+ F L P +++H++ +G A HS F PG L +G YH+ HH + N++ELEFLD + G THH Sbjct: 8 AFWQAIGAALILMLSHCICVGIVMYFDFSGKWEAYELSKSRSKSLSDRMYDYQIGIRKFCLDLVLLFVPCIAFCFWCKGDKIAHSP-------DSMFLSFVKLLTG----YALGKIWAFLVHYGLHFP--LFYQFHRRHHRNPKNLVASAAWDDSFVEYAIMEI-PSFAITLLLFPTHYYWHLIHFAWHGWDGACGHSGFAAPGLLGACFNGEYHYHHHALLTVNYAELEFLDKLCG---THH 233 The following BLAST results are available for this feature:
BLAST of NO26G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01270 ID=NO26G01270|Name=NO26G01270|organism=Nannochloropsis oceanica|type=gene|length=1539bpback to top protein sequence of NO26G01270.1 >NO26G01270.1-protein ID=NO26G01270.1-protein|Name=NO26G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bpback to top Synonyms
Publications
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