NO26G01180, NO26G01180 (gene) Nannochloropsis oceanica

Overview
NameNO26G01180
Unique NameNO26G01180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1523
Alignment locationchr26:382421..383943 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:382421..383943 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO26G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01180.1NO26G01180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01180.1NO26G01180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01180 ID=NO26G01180|Name=NO26G01180|organism=Nannochloropsis oceanica|type=gene|length=1523bp
CATGACACGGGTGTTTGGTGTGTGAAGCAGGGGAAGACCAAGAGAAAAAG
AGTACGTTTCGGAACTTCTTAATTCTTTTTTTTGGGGGGGAATCAACAAA
TCCCATAGGCAGACCTTCCAAAAAGTCGCAATCTACTTGCCGTCCCCGGT
ATTTGCCCATGGTCAACTCTACGTCGAGCTCTCGAGAGCGAGAGTAGGAG
ACCCCACGAACATCCTCATGATGATCACCCACCTTCTTCTGCACGGCCAG
CCACACTCACCACACCCAATGTGGTCTATCAGCAAGTGTTTGTGTACATG
CAACCACCACATCCACCACCATAGCAACTCCCAGAAAAAATGGATGCATA
GAATACCACTGCGGTGAGGAGAGTAAAGGATATCGGAGGGCGTCTACGAA
TGGGTTGCAGTTGCTGATTTATTGTAGTCCCCAATTCCTCAAATGGACCC
TGATCTCTGTCGATTTTACGGGCATCGTTGTTCCCTCCCTAAATAGATCC
CGGGATGCCACTTCAGATCGACCGGTGGGCAGGTTGTACCGACGGGCATC
GGCGTCTTTTCCAGGAGGAATGGACAACTTCCGGAATATTACCAGGCGCT
GGTGCTTCATTCTCTCGGGCCCCGTCAAATGTCTGTACATAAGCCCCTGC
CGCGTTCCGAAATTCGATGATCAAGGGGTTGATCCTAAACAGGAGTCGTT
GCAATGGCCGAAGTGTGCCAGGTCTGAAGATGACCGAACGGTTGGGCCGT
GAAGGCATGAGGGCGAGGCGTGCGTCGTGCTGCTCCTGGGAGTTGTCGAG
TATGTACGGCTGCGCAAATCTGGGCTTGTAGCCCCGTGTGCGGTCGGGTA
TCAGATGCCCCATTTTGTGGTGGACCTGTCCATTAATCCTCTCACTGCTG
GCTCGACTCGATTTGGGACGCCATCTGTAACTGCTGGCTTGATGTTCGCT
TCTTGCGAGCTCATCGATTGCACCGAGTTGTAAGCGCGGATATTGGAGTT
GAACTGGCGGCCCTTGCGCGTGTTGGGGTCAAACAGGTGTTGCATCTCAG
GTGGTGTCTCCGACAATTTGTTTAGGCTCGCCCACCCTCTATTGCAACAA
ATGCTGAAAAGACGGTCGGCGGAGTTACGATGCACCGTCTCAAAAAGCCG
CAGTGCTGGCAAGCCACTCGATCACCCAAGTGATGTGGTTGTCGGGCTCC
AGGAATTTGAGTTTGTACGTGGGCACGGTGCTCACGCGGTGCTGTTCGCG
CCGCTCTCGACGGGCTTGCTGGTCAGCTGCGCGCTCGGCTGCTCGAACCT
CTGGCTATATGCGCCGCTCTCGACGGGCTTGCTGGTCAGCTGCGCGCTCG
GCTGCTCGAACCTCTGGCTATACGCGCCGCTCTTGACGGGCTTGCTGGCT
AGCCATGCTTTCGGCTGCAAGTATTTCGGGGTTCAAGCGCCGGCGTTGTC
AACCCTATCGGTTAGCCTCGCGTTCGACTTGGTTGCGTGGCCTCTGTACA
GAATTGTTACGCAGGTGGCCTGA
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protein sequence of NO26G01180.1

>NO26G01180.1-protein ID=NO26G01180.1-protein|Name=NO26G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=141bp
MLKRRSAELRCTVSKSRSAGKPLDHPSDVVVGLQEFEFVRGHGAHAVLFA
PLSTGLLVSCALGCSNLWLYAPLSTGLLVSCALGCSNLWLYAPLLTGLLA
SHAFGCKYFGVQAPALSTLSVSLAFDLVAWPLYRIVTQVA*
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Synonyms
Publications