NO26G01140, NO26G01140 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO26G01140 vs. NCBI_GenBank
Match: PNH01468.1 (hypothetical protein TSOC_012642, partial [Tetrabaena socialis]) HSP 1 Score: 89.0 bits (219), Expect = 7.000e-14 Identity = 60/179 (33.52%), Postives = 89/179 (49.72%), Query Frame = 0
Query: 131 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRGAHRELIVRHY---HRLWDARCEKKRARAHMAVYAGKQKVLDVFY----AGLTGPGQAKPIIAYGAGIFPHTGKGEVSVPVERVLRVCERYYRTVYVPEHLTTKVH 301
RIV IDPGR N++ A++ S K+ LTR YY++ + K++ +SW + D A S + K DL A + H W+ + + A+ + +Y GK++VL F+ G G +IAYGA F GKGE+SVP V + C+ + T V E TTK+H
Sbjct: 663 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 838
BLAST of NO26G01140 vs. NCBI_GenBank
Match: PNH08370.1 (hypothetical protein TSOC_005131 [Tetrabaena socialis]) HSP 1 Score: 89.0 bits (219), Expect = 7.000e-14 Identity = 60/179 (33.52%), Postives = 89/179 (49.72%), Query Frame = 0
Query: 131 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRGAHRELIVRHY---HRLWDARCEKKRARAHMAVYAGKQKVLDVFY----AGLTGPGQAKPIIAYGAGIFPHTGKGEVSVPVERVLRVCERYYRTVYVPEHLTTKVH 301
RIV IDPGR N++ A++ S K+ LTR YY++ + K++ +SW + D A S + K DL A + H W+ + + A+ + +Y GK++VL F+ G G +IAYGA F GKGE+SVP V + C+ + T V E TTK+H
Sbjct: 377 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 552
BLAST of NO26G01140 vs. NCBI_GenBank
Match: PNH08357.1 (hypothetical protein TSOC_005129 [Tetrabaena socialis]) HSP 1 Score: 89.0 bits (219), Expect = 7.000e-14 Identity = 60/179 (33.52%), Postives = 89/179 (49.72%), Query Frame = 0
Query: 131 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRGAHRELIVRHY---HRLWDARCEKKRARAHMAVYAGKQKVLDVFY----AGLTGPGQAKPIIAYGAGIFPHTGKGEVSVPVERVLRVCERYYRTVYVPEHLTTKVH 301
RIV IDPGR N++ A++ S K+ LTR YY++ + K++ +SW + D A S + K DL A + H W+ + + A+ + +Y GK++VL F+ G G +IAYGA F GKGE+SVP V + C+ + T V E TTK+H
Sbjct: 324 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 499
BLAST of NO26G01140 vs. NCBI_GenBank
Match: PNH08379.1 (hypothetical protein TSOC_005114 [Tetrabaena socialis]) HSP 1 Score: 89.0 bits (219), Expect = 7.000e-14 Identity = 60/179 (33.52%), Postives = 89/179 (49.72%), Query Frame = 0
Query: 131 RIVAIDPGRVNLVTALD--SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRGAHRELIVRHY---HRLWDARCEKKRARAHMAVYAGKQKVLDVFY----AGLTGPGQAKPIIAYGAGIFPHTGKGEVSVPVERVLRVCERYYRTVYVPEHLTTKVH 301
RIV IDPGR N++ A++ S K+ LTR YY++ + K++ +SW + D A S + K DL A + H W+ + + A+ + +Y GK++VL F+ G G +IAYGA F GKGE+SVP V + C+ + T V E TTK+H
Sbjct: 93 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 268
BLAST of NO26G01140 vs. NCBI_GenBank
Match: PNH00238.1 (hypothetical protein TSOC_013956 [Tetrabaena socialis]) HSP 1 Score: 83.6 bits (205), Expect = 2.900e-12 Identity = 64/235 (27.23%), Postives = 98/235 (41.70%), Query Frame = 0
Query: 73 FHNRVSTDGVSVSVFFHVAKERLKRXXXXXXXXXXXXXXXXXXXXXQGQENLQPVRERRIVAIDPGRVNLVTALD---SQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRGAHRELIVRHYHRLWDARCEKKRARAHMAVYAGKQKVLDVFYA----GLTGPGQAKPIIAYGAGIFPHTGKGEVSVPVERVLRVCERYYRTVYVPEHLTTKVH 301
F + TDGVSV + H + + K E L R+V IDPGR N+V A++ KI LTR YY++ + + ++ + W + + A S + K L A + W + + A+ + +Y GK++V+ F++ G G +I YGA F GKGE+SVP V + C + T V E TTK+H
Sbjct: 299 FTGTIETDGVSVCI--HYMRPKRKEAEEEADDGGNEEAPKAKSKQRPTPEQLS---GSRVVVIDPGRTNIVYAVEVPPEAPPKIYRLTRSQYYQESGVVQGSQRAARWLRGVKEELAQLSTASPKGASLPLFQAFIATYLETCEVRWTEALKTRWAQQSLRLYGGKKRVVAKFFSEIARGDAGAPARPVVIGYGAAKFAPGGKGELSVPTSGVFKACRERFPTYLVDEFRTTKIH 528
BLAST of NO26G01140 vs. NCBI_GenBank
Match: PNH02916.1 (hypothetical protein TSOC_011071 [Tetrabaena socialis]) HSP 1 Score: 80.9 bits (198), Expect = 1.900e-11 Identity = 65/203 (32.02%), Postives = 99/203 (48.77%), Query Frame = 0
Query: 124 LQPVRER----RIVAIDPGRVNLVTALDSQTG--KIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRGAHRELIVRHYH---RLWDARCEKKRARAHMAVYAGKQKVLDVFYAGLT--GPG-QAKP-IIAYGAGIFPHTGKGEVSVPVERVLRVCERYYRTVYVPEHLTTKVHLDCGQRLNPIARR 314
L+P E+ RIV IDPGR N++ A++ KI LTR YY++ + K++ ++W + S + K DL+ A + H W+ + + A+ H+ +Y GK++VL F+ + PG A+P II YGA F GKGE+SVP V + C + T V E +TKV+ L +A R
Sbjct: 356 LRPTPEQLSRCRIVVIDPGRTNIIYAVEVTPDGVKIYRLTRAQYYQESGVERGKQQAANWLRGTKEELTKLSAASPKGA--DLQ-AFLVFVTTHLETSDARWEEALKPRWAQMHLRLYGGKKRVLAKFFDEIARGDPGAPARPVIIGYGAAKFAPGGKGELSVPTCGVFKACRARFPTHLVDEFRSTKVYHADDSILQGVAER 555
BLAST of NO26G01140 vs. NCBI_GenBank
Match: KXZ41250.1 (hypothetical protein GPECTOR_607g688 [Gonium pectorale]) HSP 1 Score: 80.5 bits (197), Expect = 2.500e-11 Identity = 61/202 (30.20%), Postives = 95/202 (47.03%), Query Frame = 0
Query: 131 RIVAIDPGRVNL---VTALDSQTGKIKTLTRRAYYEKGRINECKRKFSSWEDALGDINAAFSRTTMKSCCPDLRGAHRELIVRHYH-----RLWDARCEKKRARAHMAVYAGKQKVLDVFYAGLTGPGQAK-----PIIAYGAGIFPHTGKGEVSVPVERVLRV-CERYYRTVY-VPEHLTTKVHLDCGQRLNPIARRTEGE 318
R++A++ GR N+ V LD ++ LTR YY + I R+ W + A S + K G L+ H +LW + + A+ + ++ GK++ L +F GL G+A+ +IAYGA F GKGE+SVP R+ R R+ R VY V E TT+VH + L + +R +G+
Sbjct: 268 RVLAVNLGRTNIAYVVELLDDGRLRVYRLTRAGYYRESGILGAARRAQHWLKGVRRATQALSLVSSKGA-----GLEAFLVFVRVHLETSGQLWAEMLKHRWAQERLRLHGGKKRALALFLEGLVWAGEARGDRRPVLIAYGAAGFASGGKGELSVPTTRMYRAFTHRFLRLVYLVDEFRTTRVHHEDDSVLESVHKRKKGK 464
BLAST of NO26G01140 vs. NCBI_GenBank
Match: AAL56217.1 (unknown [White spot syndrome virus]) HSP 1 Score: 69.3 bits (168), Expect = 5.700e-8 Identity = 92/307 (29.97%), Postives = 142/307 (46.25%), Query Frame = 0
Query: 42 MDTKKFCQDAVSVKEMWDETFQVGNLRNQRV---FHNRVSTDGVSVSVFFHVAKERLKRXXXXXXXXXXXXXXXXXXXXXQGQENLQPVRERRIVAIDPGRVNLV--TALDSQTGKI---KTLTRRAYYEKG------RINECKRK--------------FSSWEDALGDINAAFSRTTMKSCCPDLRGAHRELIVRHYHRLWDARCEKKRARAHMAVYAGKQKVLDVFYAGLTGPGQAK---PIIAYGAGIFPHTGKGEVSVPVERVL--RVCERY---YRTVYVPEHLTTKVHLDCGQRLNPIAR 313
M+ + + + K+ W F V ++ R FH+ + TDG VSV F R XXXXXXXXXXXXXXXX + + N P + +V +DPGR N+V + D++ ++ +T + YY++ + NE +K + + E+ + D N S T K A+ +++ HY LW+ + +KK + M VY+ KQK + F L P + K IA+G F TG+GE R+ ++ ER R +V E T+KV C Q LN + +
Sbjct: 164 MEERHKQSEDILYKQGWYLLFDVKKIKKLRPNWNFHS-IQTDGEGVSVLF-------SREVEXXXXXXXXXXXXXXXXGDEDRRNYPPTNAKYVVGVDPGRTNVVSCSVFDTRQKRVVRKHRMTAKQYYQESWMTDRRKANETYKKNNKEYKEALEEITRYDNGEEIINDGNGDTSTPTKKF------EAYLKVVNEHYRLLWNEKGKKKYRKNAMKVYSRKQKCISNFIDELI-PKRDKIEDYHIAFGDAKFACTGRGEQYASPARIFAKKIKERVGGDKRFTFVDEKYTSKVCHRCNQPLNMLEK 455 The following BLAST results are available for this feature:
BLAST of NO26G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01140 ID=NO26G01140|Name=NO26G01140|organism=Nannochloropsis oceanica|type=gene|length=2562bpback to top protein sequence of NO26G01140.1 >NO26G01140.1-protein ID=NO26G01140.1-protein|Name=NO26G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=758bpback to top Synonyms
Publications
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