NO26G01090, NO26G01090 (gene) Nannochloropsis oceanica

Overview
NameNO26G01090
Unique NameNO26G01090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1740
Alignment locationchr26:361778..363517 +

Link to JBrowse

Properties
Property NameValue
DescriptionATPase, AFG1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:361778..363517 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005654ATPase_AFG1-like
Homology
BLAST of NO26G01090 vs. NCBI_GenBank
Match: EWM23141.1 (ATPase, AFG1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 756.5 bits (1952), Expect = 6.000e-215
Identity = 379/530 (71.51%), Postives = 447/530 (84.34%), Query Frame = 0
Query:   43 STQG-GPMLAYHKLVGEKRIERNEKQLQAVAQLQQLYNQVCEFHARPDDYRRTTYRFVDFAIKKEETITPPKGLYLYGGVGTGKTFLMDLFYAQAPSTWKKRRVHFNQFMLEVHERLHKLRQAGHRGDLLAEVTEGLYQQAWLLCFDEFQVTDVADAMVLKRLFSGLLEKGSVIISTSNRPPQDLYLNGLQRDLFLPFIDLLKERHHVHNIDSPTDYRLVHRAYGLATDTLFVHNRQKKKQAQPGEALATVASKLKDIRKNHYGDEDDEEDEARYAFNEALRNATKGQALVPMVIPVPQQGRRVYAPKVSLSTRTAMFTFHELCELPLGAADYIALSHTFPNIFLAEVPVMTLNDVNKLRRFITLVDCLYEARTQLVMLTDAPITELFDAAANSENGQDEVFAFGRTVSRLMEMQGADYRENHRASLTTHDGAALLGRALEGGQRGWAGAGPQQVFDFYDIDHKNRWETPMKLRAFLEDFSEVVLKRRDVVSDELVKQLLPTQLASSAKGLEAFMTEEEGRVVLERALRE 572
            S+QG GP+ AY+ +VGE+RIE N KQLQ VAQLQQ+++QV +F +RP+ YRR TY+FVDFAIKKEE +TPPKGLYLYGGVGTGKTFLMDLFYAQAPS+WKKRRVHFNQFMLEVHERLH+LR+ GHRGD LA V E LYQQAWL CFDEFQVTD+ADAMVLKRLFSGLL++GSV+ISTSNRPP+DLYLNGLQRDLFLPFI+LLKER+ VH IDSPTDYRLVHRAYGLATDTLFVH+R +      GEA   +A             E+ EED AR+ F EAL++ATKGQA+ P+ IP+PQQGRRV+ P+V LSTRTA+FTF ELCE PLGAADYIALS + P +FLA+VPVMTL DVNKLRRFITLVDCLYEARTQLV+LTDAP++ELFDAAA SE+ QDEVFAFGRTVSRLMEMQGADYRE+H+ +L+ +DGA LLGRAL G   GW G GP+++F FY++D +NRW++  K+RAFLED +EV L+RRDVVSD LV +++ +++  SA+G+E FMTE +GR  LE ALRE
Sbjct:   47 SSQGKGPLQAYNDMVGEQRIEWNGKQLQVVAQLQQVFDQVLDFSSRPEAYRRVTYKFVDFAIKKEEVVTPPKGLYLYGGVGTGKTFLMDLFYAQAPSSWKKRRVHFNQFMLEVHERLHRLRKEGHRGDPLATVAEDLYQQAWLHCFDEFQVTDIADAMVLKRLFSGLLQRGSVMISTSNRPPEDLYLNGLQRDLFLPFIELLKERNRVHYIDSPTDYRLVHRAYGLATDTLFVHSR-RLTGLMNGEAAPALAVP--------NAGEEMEEDGARFGFKEALKSATKGQAMTPVGIPLPQQGRRVHVPRVGLSTRTALFTFQELCEQPLGAADYIALSQSLPTLFLADVPVMTLVDVNKLRRFITLVDCLYEARTQLVLLTDAPVSELFDAAAYSESAQDEVFAFGRTVSRLMEMQGADYREHHQTALSKNDGATLLGRALGGRDGGWPGPGPEELFGFYNLDGRNRWDSAAKVRAFLEDLAEVTLQRRDVVSDALVARMMGSRVTVSARGMEEFMTEGDGRAKLEAALRE 567          
BLAST of NO26G01090 vs. NCBI_GenBank
Match: OQS07056.1 (hypothetical protein THRCLA_00940 [Thraustotheca clavata])

HSP 1 Score: 303.9 bits (777), Expect = 1.100e-78
Identity = 167/414 (40.34%), Postives = 250/414 (60.39%), Query Frame = 0
Query:   52 YHKLVGEKRIERNEKQLQAVAQLQQLYNQVCEFHARPDDYRRTTYRFVDF----AIKKEETITPPKGLYLYGGVGTGKTFLMDLFYAQAPSTWKKRRVHFNQFMLEVHERLHKLRQAGHRGDLLAEVTEGLYQQAWLLCFDEFQVTDVADAMVLKRLFSGLLEKGSVIISTSNRPPQDLYLNGLQRDLFLPFIDLLKERHHVHNI-DSPTDYRLVHRAYGLATDTLFVHNRQKKKQAQPGEALATVASKLKDIRKNHYGDEDDEEDEARYAFNEALRNATKGQALVPMVIPVPQQGRRVYAPKVSLSTRTAMFTFHELCELPLGAADYIALSHTFPNIFLAEVPVMTLNDVNKLRRFITLVDCLYEARTQLVMLTDAPITELFDAAANSENGQDEVFAFGRTVSRLMEMQGADY 461
            Y++ V +K I R+  Q++A+  L++L +++      P      T  F  +      ++++TI  PKG+YLYGGVG GKTFLMD+FY   P    KRRVHF++FMLEVHE++H+LR+ G   D +  +T+ L +++ +LCFDEFQVTDVADA++L+RLFS ++E GS++++TSNRPP+DLY NGLQRDLFLPFI LL+E   VH++ +S TDYR                                   KLK + +  +        E R  F +  ++ +K  ++ P+ + +  QGR +   + ++  +  + +F +LC+ PLGAADY+ L   F  +F+ ++P++ +++ N  RRFIT VDC+YE + QL  L  AP  +L     +S+N  DE FAF RTVSRLMEMQ  +Y
Sbjct:   28 YNEAVDKKEIRRDMVQIKALGHLERLQHELLTVVDEPPXXXXATSMFASWFGNDDKEEKKTIKSPKGVYLYGGVGCGKTFLMDMFYDNLP-VESKRRVHFHKFMLEVHEKMHELRKQGFHEDPIPHITKELVEKSRVLCFDEFQVTDVADALILRRLFSSMIEAGSIVVATSNRPPKDLYKNGLQRDLFLPFIALLQETSVVHSLEESSTDYR-----------------------------------KLKGVSEVEHVYRSPLTVENRAMFLQHFKDLSKDDSIEPVKLHL--QGRTLQVEQAAIREKVCLMSFSDLCDKPLGAADYLVLGEAFDYVFVQDIPLLDISNRNTTRRFITFVDCMYEKKVQLYCLAAAPPMDLLIQNQDSKNVLDEAFAFDRTVSRLMEMQSEEY 403          
BLAST of NO26G01090 vs. NCBI_GenBank
Match: OQR97085.1 (hypothetical protein ACHHYP_12761 [Achlya hypogyna])

HSP 1 Score: 293.5 bits (750), Expect = 1.400e-75
Identity = 173/433 (39.95%), Postives = 248/433 (57.27%), Query Frame = 0
Query:   35 SSSIASPLSTQGGPMLAYHKLVGEKRIERNEKQLQAVAQLQQLYNQVCEFHARP-DDYRRTTYRFVDFAIKKEETITP-----PKGLYLYGGVGTGKTFLMDLFYAQAPSTWKKRRVHFNQFMLEVHERLHKLRQAGHRGDLLAEVTEGLYQQAWLLCFDEFQVTDVADAMVLKRLFSGLLEKGSVIISTSNRPPQDLYLNGLQRDLFLPFIDLLKERHHVHNI-DSPTDYRLVHRAYGLATDTLFVHNRQKKKQAQPGEALATVASKLKDIRKNHYGDEDDEEDEARYAFNEALRNATKGQALVPMVIPVPQQGRRVYAPKVSLSTRTAMFTFHELCELPLGAADYIALSHTFPNIFLAEVPVMTLNDVNKLRRFITLVDCLYEARTQLVMLTDAPITELFDAAANSENGQDEVFAFGRTVSRLMEMQGADY 461
            S + A+P S     +  Y + V +K I  +  Q++A++ LQ+L   V      P       T  F  +   K+ET  P     PKG+Y+YGGVG GKTFLMD+F+   P    KRRVHF++FMLEVHE++H+LR+ G   D +  +T+ L + + ++CFDEFQVTDVADA++L+RLFS ++E GS++++TSNRPP DLY NGLQRDLFLPFI LL+E   VH++ +S TDYR                                   KLK   +  +          +  F+E  +  TKG A+ P  + +  QGR V   + ++  +  + +F +LC+ PLGAADY+ +   F  +F+ ++P++ +++ N  RRFIT VDC+YE + QL  L  A   +L    A S+N  DE FAF RTVSRLMEMQ  +Y
Sbjct:   13 SMATAAPRSL----LAIYQEAVDKKEIHADVVQVKALSHLQRLQEDVLSMDLTPAPKVEEATSMFASW-FGKDETPAPKARTSPKGVYMYGGVGCGKTFLMDMFFDNLPIE-SKRRVHFHKFMLEVHEKMHQLRKEGLHEDPIPHITKELVETSRVICFDEFQVTDVADALILRRLFSAMIEAGSIVVATSNRPPTDLYKNGLQRDLFLPFIALLQETSVVHSLEESSTDYR-----------------------------------KLKGEDEVEHVYRSPITATNQRLFHEHFKLLTKGDAIEP--VKLQTQGRTVAVEQAAIREKVCLMSFADLCDKPLGAADYLVIGEAFDTVFVEDIPLLDISNRNTTRRFITFVDCMYEKKVQLYCLAAALPMDLLVQNAGSKNVLDEAFAFDRTVSRLMEMQSEEY 402          
BLAST of NO26G01090 vs. NCBI_GenBank
Match: CBN80128.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 292.7 bits (748), Expect = 2.400e-75
Identity = 196/513 (38.21%), Postives = 277/513 (54.00%), Query Frame = 0
Query:   47 GPMLAYHKLVGEKRIERNEKQLQAVAQLQQLYNQVCEFHARPDDYRRTTYRFVDFAI----------------KKEETITPPKGLYLYGGVGTGKTFLMDLFYAQAPSTWKKRRVHFNQFMLEVHERLHKLRQAGHRGD-LLAEVTEGLYQQAWLLCFDEFQVTDVADAMVLKRLFSGLLEKGSVIISTSNRPPQDLYLNGLQRDLFLPFIDLLKERHHVHNID-SPTDYRLVHRAYGLATDTLFVHNRQKKKQAQPGEALATVASKLKDIRKNHYGDEDDEEDEARYAFNEALRNATKGQALVPMVIPVPQQGRRVYAPKVSLSTRTAMFTFHELCELPLGAADYIALSHTFPNIFLAEVPVMTLNDVNKLRRFITLVDCLYEARTQLVMLTDAPITELFD-AAANSENGQDEVFAFGRTVSRLMEMQGADY-RENHRAS---LTTHDGAALLGRALEGGQRGWAGAGPQQVFDFYDIDHKNRWETPMKLRAFLEDFSEVVLKRRDVVSDEL 537
            GP+ AY KLV +  I  +  Q++A+  LQ L+  +  +  RP    R  +  +  ++                  + T   P+G+Y++GGVGTGKTF+MDLF+ ++P T  KRRVHF  FML+VH+R+HK RQ G  G+ +++ VT+ + ++ WLLCFDE QVTD+ADAM++++LFSGL  KG+V+++TSNRPP  LY  GLQR  FLPFI+ LKER HVH+++ S TDYRL+        D++       K    P  A                        ++R  F+   +  + G   VP  + +  QGR V  P+     R AM TF ELC   LGAADY A+S  F  +F+  VP+M L  +N++RR ITLVD +YE   +LV L +A   ELFD      E+  DEVFAFGRT SRL EMQG  Y +   R S   L    G  L    L             ++++ YD++   R +   +L   +ED  E     R+V ++ L
Sbjct:   63 GPLQAYAKLVLKGEIREDRHQVKALHLLQTLHASLEGY--RPQVPLREQHLGLWSSVLNSLGGNNDDNGSSGGHSQPTENTPRGIYMHGGVGTGKTFMMDLFFQESPVT-SKRRVHFLDFMLDVHQRMHKCRQRGISGEVMVSTVTDEILEEGWLLCFDEMQVTDIADAMMIRQLFSGLWGKGAVVVATSNRPPDHLYHKGLQRAAFLPFIEQLKERSHVHSLEASRTDYRLLK-----GVDSV------SKVYLSPDNA------------------------KSREEFDNLWKAISGGVQTVP--VNLSAQGRSVRIPRAVKGGRVAMMTFDELCGKALGAADYTAISEAFHTLFVHGVPMMNLVHINQVRRLITLVDVMYERGVKLVCLAEALPLELFDPGPGRREDMPDEVFAFGRTASRLTEMQGQKYLKRTWRPSENYLVRFTGEQLSDEEL------------VKIWEAYDVNGDGRMDRE-ELSFLMEDLCEAKNGHRNVPTEAL 522          
BLAST of NO26G01090 vs. NCBI_GenBank
Match: XP_008618168.1 (hypothetical protein SDRG_13848 [Saprolegnia diclina VS20] >EQC28520.1 hypothetical protein SDRG_13848 [Saprolegnia diclina VS20])

HSP 1 Score: 289.7 bits (740), Expect = 2.100e-74
Identity = 178/437 (40.73%), Postives = 246/437 (56.29%), Query Frame = 0
Query:   32 RLFSSSIASPLSTQGGPMLAYHKLVGEKRIERNEKQLQAVAQLQQLYNQVCEFHARPD---DYRRTTYRFVDFAIKKE----ETITPPKGLYLYGGVGTGKTFLMDLFYAQAPSTWKKRRVHFNQFMLEVHERLHKLRQAGHRGDLLAEVTEGLYQQAWLLCFDEFQVTDVADAMVLKRLFSGLLEKGSVIISTSNRPPQDLYLNGLQRDLFLPFIDLLKERHHVHNID-SPTDYRLVHRAYGLATDTLFVHNRQKKKQAQPGEALATVASKLKDIRKNHYGDEDDEEDEARYAFNEALRNATKGQALVPMVIPVPQQGRRVYAPKVSLSTRTAMFTFHELCELPLGAADYIALSHTFPNIFLAEVPVMTLNDVNKLRRFITLVDCLYEARTQLVMLTDAPITELFDAAANSENGQDEVFAFGRTVSRLMEMQGADY 461
            R F+SS A PL      +  Y + V ++ I  +  Q++A+  LQ+L ++V +              T  F  +   KE    E    PKG+Y++GGVG GKTFLMD+FY   P    KRRVHF++FMLEVHE++H LR+AG   D +  +T+ L   + ++CFDEFQVTDVADA++L+RLFS ++E GS++++TSNRPP DLY NGLQRDLFLPFI LL+E   VH++D S TDYR                                   KLK   +  +       +  R  F E  +  TKG A+ P  + +  QGR V     ++  +    TF ELC+ PLGAADY+AL   F  +F+ ++P++ +++ N  RRFIT VDC+YE + QL  L DA    L      S++  DE FAF RTVSRL+EMQ  +Y
Sbjct:   14 RTFASS-ARPL------LDIYQEAVTKQEIRADAVQVKALVHLQRLQDEVLDMDLSTPAAIAIEEPTSMFSAWFGAKEARVPEKKASPKGVYMHGGVGCGKTFLMDMFYDNLPIE-SKRRVHFHKFMLEVHEKMHTLRKAGLHEDPIPHITKELVATSRVICFDEFQVTDVADALILRRLFSAMIEAGSIVVATSNRPPTDLYKNGLQRDLFLPFIALLQETSVVHSLDESSTDYR-----------------------------------KLKGEDEVEHVYRQPLTEANRRLFYEHFKLFTKGDAIEP--VKLHTQGRTVNVEHAAIREKVCQVTFSELCDKPLGAADYLALGEAFDTVFVQDIPLLDISNRNTTRRFITFVDCMYEKKVQLYCLADALPMHLLVQNPESKSVLDEAFAFDRTVSRLLEMQSEEY 405          
BLAST of NO26G01090 vs. NCBI_GenBank
Match: XP_008618169.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC28521.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 289.7 bits (740), Expect = 2.100e-74
Identity = 178/437 (40.73%), Postives = 246/437 (56.29%), Query Frame = 0
Query:   32 RLFSSSIASPLSTQGGPMLAYHKLVGEKRIERNEKQLQAVAQLQQLYNQVCEFHARPD---DYRRTTYRFVDFAIKKE----ETITPPKGLYLYGGVGTGKTFLMDLFYAQAPSTWKKRRVHFNQFMLEVHERLHKLRQAGHRGDLLAEVTEGLYQQAWLLCFDEFQVTDVADAMVLKRLFSGLLEKGSVIISTSNRPPQDLYLNGLQRDLFLPFIDLLKERHHVHNID-SPTDYRLVHRAYGLATDTLFVHNRQKKKQAQPGEALATVASKLKDIRKNHYGDEDDEEDEARYAFNEALRNATKGQALVPMVIPVPQQGRRVYAPKVSLSTRTAMFTFHELCELPLGAADYIALSHTFPNIFLAEVPVMTLNDVNKLRRFITLVDCLYEARTQLVMLTDAPITELFDAAANSENGQDEVFAFGRTVSRLMEMQGADY 461
            R F+SS A PL      +  Y + V ++ I  +  Q++A+  LQ+L ++V +              T  F  +   KE    E    PKG+Y++GGVG GKTFLMD+FY   P    KRRVHF++FMLEVHE++H LR+AG   D +  +T+ L   + ++CFDEFQVTDVADA++L+RLFS ++E GS++++TSNRPP DLY NGLQRDLFLPFI LL+E   VH++D S TDYR                                   KLK   +  +       +  R  F E  +  TKG A+ P  + +  QGR V     ++  +    TF ELC+ PLGAADY+AL   F  +F+ ++P++ +++ N  RRFIT VDC+YE + QL  L DA    L      S++  DE FAF RTVSRL+EMQ  +Y
Sbjct:   14 RTFASS-ARPL------LDIYQEAVTKQEIRADAVQVKALVHLQRLQDEVLDMDLSTPAAIAIEEPTSMFSAWFGAKEARVPEKKASPKGVYMHGGVGCGKTFLMDMFYDNLPIE-SKRRVHFHKFMLEVHEKMHTLRKAGLHEDPIPHITKELVATSRVICFDEFQVTDVADALILRRLFSAMIEAGSIVVATSNRPPTDLYKNGLQRDLFLPFIALLQETSVVHSLDESSTDYR-----------------------------------KLKGEDEVEHVYRQPLTEANRRLFYEHFKLFTKGDAIEP--VKLHTQGRTVNVEHAAIREKVCQVTFSELCDKPLGAADYLALGEAFDTVFVQDIPLLDISNRNTTRRFITFVDCMYEKKVQLYCLADALPMHLLVQNPESKSVLDEAFAFDRTVSRLLEMQSEEY 405          
BLAST of NO26G01090 vs. NCBI_GenBank
Match: XP_012210253.1 (hypothetical protein SPRG_14379 [Saprolegnia parasitica CBS 223.65] >KDO19042.1 hypothetical protein SPRG_14379 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 288.1 bits (736), Expect = 6.000e-74
Identity = 176/437 (40.27%), Postives = 248/437 (56.75%), Query Frame = 0
Query:   32 RLFSSSIASPLSTQGGPMLAYHKLVGEKRIERNEKQLQAVAQLQQLYNQVCEFH----ARPDDYRRTTYRFVDFAIKKE---ETITPPKGLYLYGGVGTGKTFLMDLFYAQAPSTWKKRRVHFNQFMLEVHERLHKLRQAGHRGDLLAEVTEGLYQQAWLLCFDEFQVTDVADAMVLKRLFSGLLEKGSVIISTSNRPPQDLYLNGLQRDLFLPFIDLLKERHHVHNID-SPTDYRLVHRAYGLATDTLFVHNRQKKKQAQPGEALATVASKLKDIRKNHYGDEDDEEDEARYAFNEALRNATKGQALVPMVIPVPQQGRRVYAPKVSLSTRTAMFTFHELCELPLGAADYIALSHTFPNIFLAEVPVMTLNDVNKLRRFITLVDCLYEARTQLVMLTDAPITELFDAAANSENGQDEVFAFGRTVSRLMEMQGADY 461
            R F+SS A PL      +  Y + V ++ I  +  Q++A+A LQ+L ++V           +    T+     F  K+E   E +  PKG+Y++GGVG GKTFLMD+FY   P    KRRVHF++FMLEVHE++H LR+AG   D +  +T+ L   + ++CFDEFQVTDVADA++L+RLFS ++E GS++++TSNRPP DLY NGLQRDLFLPFI LL+E   VH++D S TDYR                                   KLK   +  +       +  +  F E  +  TKG A+ P  + +  QGR V     ++  +  + TF ELC+ PLGAADY+ L   F  +F+ ++P++ +++ N  RRFIT VDC+YE + QL  L  A    L      S++  DE FAF RTVSRL+EMQ  +Y
Sbjct:   14 RTFTSS-ARPL------LDIYQEAVTKQEIRADAVQVKALAHLQRLQDEVLAMSLSTPVAAEIEEPTSIFSAWFGAKEERVPEKMASPKGVYMHGGVGCGKTFLMDMFYDNLPIE-SKRRVHFHKFMLEVHEKMHMLRKAGLHEDPIPHITKELVATSRVICFDEFQVTDVADALILRRLFSAMIEAGSIVVATSNRPPTDLYKNGLQRDLFLPFIALLQETSVVHSLDESSTDYR-----------------------------------KLKGEDEVEHVYRQPLTEANQRLFYEHFKLFTKGDAIEP--VKLHTQGRAVNVEHAAIREKVCLVTFSELCDKPLGAADYLVLGEAFDTVFVQDIPLLDISNRNTTRRFITFVDCMYEKKVQLYCLAAALPMHLLVQNPESKSVLDEAFAFDRTVSRLLEMQSEEY 405          
BLAST of NO26G01090 vs. NCBI_GenBank
Match: ETI31395.1 (hypothetical protein F443_21634 [Phytophthora parasitica P1569])

HSP 1 Score: 287.0 bits (733), Expect = 1.300e-73
Identity = 174/453 (38.41%), Postives = 250/453 (55.19%), Query Frame = 0
Query:   20 ASSRPPPKAFKTRLFSSSIASPLSTQGGPMLAYHKLVGEKRIERNEKQLQAVAQLQQLYNQVCEFHARPDDYRRTTYR---FVDFAIKKEET----ITPPKGLYLYGGVGTGKTFLMDLFYAQAPSTWKKRRVHFNQFMLEVHERLHKLRQAGHRGDLLAEVTEGLYQQAWLLCFDEFQVTDVADAMVLKRLFSGLLEKGSVIISTSNRPPQDLYLNGLQRDLFLPFIDLLKERHHVHNI-DSPTDYRLVHRAYGLATDTLFVHNRQKKKQAQPGEALATVASKLKDIRKNHYGDEDDEEDEARYAFNEALRNATKGQALVPMVIPVPQQGRRVYAPKVSLSTRTAMFTFHELCELPLGAADYIALSHTFPNIFLAEVPVMTLNDVNKLRRFITLVDCLYEARTQLVMLTDAPITELFDAAANSENGQDEVFAFGRTVSRLMEMQGADYRENH 465
            AS R        R  S+  AS  S+Q      Y +      +  +  Q++AV  L  LY++V  +         T      +     K+E+T    I  PKGLYLYGGVG GKTF+MD+F+   P    K RVHF++FML++H+R+H+LR+ G   D +  + + L + +WLLCFDEFQVTDVADA++L+RLFS LL +G V+++TSNRPP DLY NGLQR+LF+PFIDLL ER +V ++ DS TDYR++  A  +  D ++                                 E     + R AF+       KG+  V     V  QGR+V+ P+ ++      FTF +LC+ PLGAADY+A++  F  +F++++P++    +N++RRFIT VDC+Y+   +L  L       L+    N ++  DEVFAF RTVSRL+EM    Y   H
Sbjct:   10 ASLRQSNALHAARWNSTLGASIPSSQRTLHAIYKQRADSGNVTYDPVQVRAVHHLDALYDEVVSYGGPKPQATNTNSSGSWWQKLTGKEEKTEQEPINAPKGLYLYGGVGCGKTFVMDMFFDNVP-VKHKLRVHFHEFMLDIHKRMHELRRQGFHEDPIPHIADELLENSWLLCFDEFQVTDVADALILRRLFSALLARGFVMVATSNRPPSDLYKNGLQRELFVPFIDLLGERCNVVSLEDSTTDYRVLKGA--IHADNVY---------------------------------EYPITPDTRAAFDYEFMTYCKGEETVATY--VTTQGRKVHVPEAAVEAGACRFTFSDLCDKPLGAADYLAIAEAFSVVFVSDIPLLNAEKLNQMRRFITFVDCMYDRDVRLHCLAPESPERLYQVDVNMKSHVDEVFAFDRTVSRLVEMGSEAYLLAH 424          
BLAST of NO26G01090 vs. NCBI_GenBank
Match: ETK71769.1 (hypothetical protein L915_21037 [Phytophthora parasitica] >ETL25213.1 hypothetical protein L916_20913 [Phytophthora parasitica] >ETP01182.1 hypothetical protein F441_21526 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 287.0 bits (733), Expect = 1.300e-73
Identity = 174/453 (38.41%), Postives = 250/453 (55.19%), Query Frame = 0
Query:   20 ASSRPPPKAFKTRLFSSSIASPLSTQGGPMLAYHKLVGEKRIERNEKQLQAVAQLQQLYNQVCEFHARPDDYRRTTYR---FVDFAIKKEET----ITPPKGLYLYGGVGTGKTFLMDLFYAQAPSTWKKRRVHFNQFMLEVHERLHKLRQAGHRGDLLAEVTEGLYQQAWLLCFDEFQVTDVADAMVLKRLFSGLLEKGSVIISTSNRPPQDLYLNGLQRDLFLPFIDLLKERHHVHNI-DSPTDYRLVHRAYGLATDTLFVHNRQKKKQAQPGEALATVASKLKDIRKNHYGDEDDEEDEARYAFNEALRNATKGQALVPMVIPVPQQGRRVYAPKVSLSTRTAMFTFHELCELPLGAADYIALSHTFPNIFLAEVPVMTLNDVNKLRRFITLVDCLYEARTQLVMLTDAPITELFDAAANSENGQDEVFAFGRTVSRLMEMQGADYRENH 465
            AS R        R  S+  AS  S+Q      Y +      +  +  Q++AV  L  LY++V  +         T      +     K+E+T    I  PKGLYLYGGVG GKTF+MD+F+   P    K RVHF++FML++H+R+H+LR+ G   D +  + + L + +WLLCFDEFQVTDVADA++L+RLFS LL +G V+++TSNRPP DLY NGLQR+LF+PFIDLL ER +V ++ DS TDYR++  A  +  D ++                                 E     + R AF+       KG+  V     V  QGR+V+ P+ ++      FTF +LC+ PLGAADY+A++  F  +F++++P++    +N++RRFIT VDC+Y+   +L  L       L+    N ++  DEVFAF RTVSRL+EM    Y   H
Sbjct:   10 ASLRQSNALHAARWNSTLGASIPSSQRTLHAIYKQRADSGNVTYDPVQVRAVHHLDALYDEVVSYGGPKPQATNTNSSGSWWQKLTGKEEKTEQEPINAPKGLYLYGGVGCGKTFVMDMFFDNVP-VKHKLRVHFHEFMLDIHKRMHELRRQGFHEDPIPHIADELLENSWLLCFDEFQVTDVADALILRRLFSALLARGFVMVATSNRPPSDLYKNGLQRELFVPFIDLLGERCNVVSLEDSTTDYRVLKGA--IHADNVY---------------------------------EYPITPDTRAAFDYEFMTYCKGEETVATY--VTTQGRKVHVPEAAVEAGACRFTFSDLCDKPLGAADYLAIAEAFSVVFVSDIPLLNAEKLNQMRRFITFVDCMYDRDVRLHCLAPESPERLYQVDVNMKSHVDEVFAFDRTVSRLVEMGSEAYLLAH 424          
BLAST of NO26G01090 vs. NCBI_GenBank
Match: ETL78431.1 (hypothetical protein L917_20771 [Phytophthora parasitica])

HSP 1 Score: 287.0 bits (733), Expect = 1.300e-73
Identity = 174/453 (38.41%), Postives = 250/453 (55.19%), Query Frame = 0
Query:   20 ASSRPPPKAFKTRLFSSSIASPLSTQGGPMLAYHKLVGEKRIERNEKQLQAVAQLQQLYNQVCEFHARPDDYRRTTYR---FVDFAIKKEET----ITPPKGLYLYGGVGTGKTFLMDLFYAQAPSTWKKRRVHFNQFMLEVHERLHKLRQAGHRGDLLAEVTEGLYQQAWLLCFDEFQVTDVADAMVLKRLFSGLLEKGSVIISTSNRPPQDLYLNGLQRDLFLPFIDLLKERHHVHNI-DSPTDYRLVHRAYGLATDTLFVHNRQKKKQAQPGEALATVASKLKDIRKNHYGDEDDEEDEARYAFNEALRNATKGQALVPMVIPVPQQGRRVYAPKVSLSTRTAMFTFHELCELPLGAADYIALSHTFPNIFLAEVPVMTLNDVNKLRRFITLVDCLYEARTQLVMLTDAPITELFDAAANSENGQDEVFAFGRTVSRLMEMQGADYRENH 465
            AS R        R  S+  AS  S+Q      Y +      +  +  Q++AV  L  LY++V  +         T      +     K+E+T    I  PKGLYLYGGVG GKTF+MD+F+   P    K RVHF++FML++H+R+H+LR+ G   D +  + + L + +WLLCFDEFQVTDVADA++L+RLFS LL +G V+++TSNRPP DLY NGLQR+LF+PFIDLL ER +V ++ DS TDYR++  A  +  D ++                                 E     + R AF+       KG+  V     V  QGR+V+ P+ ++      FTF +LC+ PLGAADY+A++  F  +F++++P++    +N++RRFIT VDC+Y+   +L  L       L+    N ++  DEVFAF RTVSRL+EM    Y   H
Sbjct:   10 ASLRQSNALHAARWNSTLGASIPSSQRTLHAIYKQRADSGNVTYDPVQVRAVHHLDALYDEVVSYGGPKPQATNTNSSGSWWQKLTGKEEKTEQEPINAPKGLYLYGGVGCGKTFVMDMFFDNVP-VEHKLRVHFHEFMLDIHKRMHELRRQGFHEDPIPHIADELLENSWLLCFDEFQVTDVADALILRRLFSALLARGFVMVATSNRPPSDLYKNGLQRELFVPFIDLLGERCNVVSLEDSTTDYRVLKGA--IHADNVY---------------------------------EYPITPDTRAAFDYEFMTYCKGEETVATY--VTTQGRKVHVPEAAVEAGACRFTFSDLCDKPLGAADYLAIAEAFSVVFVSDIPLLNAEKLNQMRRFITFVDCMYDRDVRLHCLAPESPERLYQVDVNMKSHVDEVFAFDRTVSRLVEMGSEAYLLAH 424          
The following BLAST results are available for this feature:
BLAST of NO26G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23141.16.000e-21571.51ATPase, AFG1-like protein [Nannochloropsis gaditan... [more]
OQS07056.11.100e-7840.34hypothetical protein THRCLA_00940 [Thraustotheca c... [more]
OQR97085.11.400e-7539.95hypothetical protein ACHHYP_12761 [Achlya hypogyna... [more]
CBN80128.12.400e-7538.21conserved unknown protein [Ectocarpus siliculosus][more]
XP_008618168.12.100e-7440.73hypothetical protein SDRG_13848 [Saprolegnia dicli... [more]
XP_008618169.12.100e-7440.73hypothetical protein, variant [Saprolegnia diclina... [more]
XP_012210253.16.000e-7440.27hypothetical protein SPRG_14379 [Saprolegnia paras... [more]
ETI31395.11.300e-7338.41hypothetical protein F443_21634 [Phytophthora para... [more]
ETK71769.11.300e-7338.41hypothetical protein L915_21037 [Phytophthora para... [more]
ETL78431.11.300e-7338.41hypothetical protein L917_20771 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005959NSK005959Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01090.1NO26G01090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|559170gene_7937Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100043g32gene7302Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01090.1NO26G01090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01090 ID=NO26G01090|Name=NO26G01090|organism=Nannochloropsis oceanica|type=gene|length=1740bp
ATGGTGCTGCTGCGGCGGGTAGGGCCGCCGGCACCACTCCAATGGCGGAT
CCTCTTCGCTTCTTCTCGACCTCCCCCAAAGGCTTTCAAAACCCGCCTGT
TCTCGTCGTCCATCGCCTCCCCTCTCTCGACGCAAGGAGGTCCGATGTTG
GCGTACCATAAGCTGGTAGGGGAGAAGCGTATCGAGCGGAACGAGAAACA
GTTACAGGCAGTGGCGCAGCTGCAGCAGCTTTACAACCAAGTTTGTGAGT
TCCATGCCCGGCCGGACGATTACCGGCGCACTACCTACCGCTTCGTGGAC
TTTGCCATCAAGAAAGAAGAAACCATCACGCCGCCCAAAGGCCTGTACTT
GTACGGGGGGGTGGGCACGGGAAAGACGTTTCTGATGGACTTGTTCTACG
CACAAGCACCTTCGACGTGGAAAAAGCGGCGAGTGCATTTTAACCAGTTT
ATGCTCGAGGTCCACGAGCGCCTGCACAAGCTCCGCCAAGCCGGCCATCG
CGGGGATCTCCTCGCGGAGGTCACAGAGGGTTTGTACCAGCAGGCCTGGC
TCTTGTGTTTCGACGAATTCCAGGTGACAGATGTCGCGGACGCGATGGTA
TTGAAGCGTTTGTTTTCGGGTTTGTTGGAAAAGGGTTCGGTAATAATTAG
CACCTCAAACCGCCCACCCCAAGATCTGTACCTAAACGGATTACAGCGCG
ACCTGTTCCTACCATTCATTGACCTTCTCAAGGAACGTCATCACGTGCAC
AACATTGACTCCCCGACGGACTACCGGCTCGTGCACCGTGCTTATGGCCT
TGCTACCGACACTCTTTTTGTCCACAACCGTCAGAAAAAAAAGCAGGCCC
AACCAGGAGAAGCATTGGCGACTGTCGCGAGCAAGCTTAAGGATATCCGG
AAAAATCATTACGGAGATGAGGATGACGAAGAGGATGAGGCGCGGTATGC
CTTCAATGAGGCCCTGAGGAATGCGACTAAAGGACAAGCCCTAGTTCCCA
TGGTCATCCCCGTCCCCCAGCAAGGCCGAAGGGTCTACGCCCCGAAGGTG
AGTCTGAGCACACGCACGGCCATGTTTACGTTTCATGAGCTGTGCGAACT
CCCTCTGGGTGCTGCAGATTATATTGCCTTGTCCCACACGTTTCCTAACA
TATTTTTGGCTGAGGTACCGGTGATGACTCTGAATGACGTGAATAAACTC
CGACGGTTCATTACTCTGGTTGATTGCCTCTATGAGGCACGCACCCAATT
GGTCATGCTGACCGACGCCCCGATCACCGAACTTTTCGATGCGGCGGCCA
ACAGCGAGAATGGGCAGGACGAGGTCTTTGCCTTTGGACGGACGGTGTCT
AGGCTCATGGAAATGCAAGGAGCTGACTACAGGGAAAACCACCGAGCGTC
CCTTACTACCCATGACGGGGCGGCTTTGTTAGGGAGGGCACTGGAAGGGG
GCCAGAGGGGGTGGGCAGGGGCAGGACCACAGCAGGTGTTTGATTTTTAT
GACATAGACCATAAGAATCGTTGGGAGACACCGATGAAGCTCAGGGCGTT
CTTGGAAGATTTCTCCGAGGTGGTGCTAAAGAGGAGGGATGTCGTTAGCG
ATGAGCTGGTCAAGCAGCTGCTACCAACGCAATTGGCGTCCTCGGCGAAG
GGCTTGGAAGCTTTCATGACAGAGGAGGAGGGGAGGGTGGTTTTGGAGAG
GGCGTTGCGGGAGGAGAGTTTGAGGGGGGGGGGAAACTGA
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protein sequence of NO26G01090.1

>NO26G01090.1-protein ID=NO26G01090.1-protein|Name=NO26G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=580bp
MVLLRRVGPPAPLQWRILFASSRPPPKAFKTRLFSSSIASPLSTQGGPML
AYHKLVGEKRIERNEKQLQAVAQLQQLYNQVCEFHARPDDYRRTTYRFVD
FAIKKEETITPPKGLYLYGGVGTGKTFLMDLFYAQAPSTWKKRRVHFNQF
MLEVHERLHKLRQAGHRGDLLAEVTEGLYQQAWLLCFDEFQVTDVADAMV
LKRLFSGLLEKGSVIISTSNRPPQDLYLNGLQRDLFLPFIDLLKERHHVH
NIDSPTDYRLVHRAYGLATDTLFVHNRQKKKQAQPGEALATVASKLKDIR
KNHYGDEDDEEDEARYAFNEALRNATKGQALVPMVIPVPQQGRRVYAPKV
SLSTRTAMFTFHELCELPLGAADYIALSHTFPNIFLAEVPVMTLNDVNKL
RRFITLVDCLYEARTQLVMLTDAPITELFDAAANSENGQDEVFAFGRTVS
RLMEMQGADYRENHRASLTTHDGAALLGRALEGGQRGWAGAGPQQVFDFY
DIDHKNRWETPMKLRAFLEDFSEVVLKRRDVVSDELVKQLLPTQLASSAK
GLEAFMTEEEGRVVLERALREESLRGGGN*
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Synonyms
Publications