NO26G01060, NO26G01060 (gene) Nannochloropsis oceanica

Overview
NameNO26G01060
Unique NameNO26G01060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2632
Alignment locationchr26:352627..355258 -

Link to JBrowse

Properties
Property NameValue
DescriptionPyridoxal 5'-phosphate synthase subunit PdxS
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:352627..355258 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0042819vitamin B6 biosynthetic process
GO:0042823pyridoxal phosphate biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR011060RibuloseP-bd_barrel
IPR001852PdxS/SNZ
IPR033755PdxS/SNZ_N
Homology
[Close]
BLAST of NO26G01060 vs. NCBI_GenBank
Match: EWM23151.1 (ethylene-inducible protein [Nannochloropsis gaditana])

HSP 1 Score: 588.2 bits (1515), Expect = 1.700e-164
Identity = 314/347 (90.49%), Postives = 320/347 (92.22%), Query Frame = 0 
Query:    1 MNGHANCNGSTXXXXXXXXXXXXXGAVGTFRVKAGLAQMLKGGVIMDVVDVEQARIAEAAGAVAVMALERIPADIRRDGGVARMSDPSMIKEIKAAVTIPVMAKARIGHFVEAQILEAIEVDYIDESEVLTMADEENHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLTSMDEDELFVYAKDIRAPLELVQEVARTGRLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNAAVLAEVSTNLGAPMVGISDIKGDAVNFRDREGGVVGGGDGVPPKKTLHGATETQLYGSSWKAG 348
            MNGHAN NGST             GAVGTFRVKAGLAQMLKGGVIMDVVDVEQA+IAEAAGAVAVMALERIPADIRRDGGVARMSDP+MIKEIKAAVTIPVMAKARIGHFVEAQILE IEVDYIDESEVLTMADE+NHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRL +MDEDELFVYAKDIRAPLELVQEVAR+G+LPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRN  VLAEVST LG PMVGISDIKGD VNFRDREGGV   GDGVPPKK LHGATETQLYGSSW  G
Sbjct:    1 MNGHANGNGST--HGGPSSSSTSTGAVGTFRVKAGLAQMLKGGVIMDVVDVEQAKIAEAAGAVAVMALERIPADIRRDGGVARMSDPAMIKEIKAAVTIPVMAKARIGHFVEAQILETIEVDYIDESEVLTMADEDNHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLKTMDEDELFVYAKDIRAPLELVQEVARSGKLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNPQVLAEVSTKLGVPMVGISDIKGDPVNFRDREGGV--AGDGVPPKKQLHGATETQLYGSSWNVG 343
[Close]
BLAST of NO26G01060 vs. NCBI_GenBank
Match: EWM23152.1 (ethylene-inducible protein [Nannochloropsis gaditana])

HSP 1 Score: 508.4 bits (1308), Expect = 1.700e-140
Identity = 264/282 (93.62%), Postives = 269/282 (95.39%), Query Frame = 0 
Query:   66 MALERIPADIRRDGGVARMSDPSMIKEIKAAVTIPVMAKARIGHFVEAQILEAIEVDYIDESEVLTMADEENHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLTSMDEDELFVYAKDIRAPLELVQEVARTGRLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNAAVLAEVSTNLGAPMVGISDIKGDAVNFRDREGGVVGGGDGVPPKKTLHGATETQLYGSSWKAG 348
            MALERIPADIRRDGGVARMSDP+MIKEIKAAVTIPVMAKARIGHFVEAQILE IEVDYIDESEVLTMADE+NHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRL +MDEDELFVYAKDIRAPLELVQEVAR+G+LPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRN  VLAEVST LG PMVGISDIKGD VNFRDREGGV   GDGVPPKK LHGATETQLYGSSW  G
Sbjct:    1 MALERIPADIRRDGGVARMSDPAMIKEIKAAVTIPVMAKARIGHFVEAQILETIEVDYIDESEVLTMADEDNHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLKTMDEDELFVYAKDIRAPLELVQEVARSGKLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNPQVLAEVSTKLGVPMVGISDIKGDPVNFRDREGGV--AGDGVPPKKQLHGATETQLYGSSWNVG 280
[Close]
BLAST of NO26G01060 vs. NCBI_GenBank
Match: CBJ30310.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 497.3 bits (1279), Expect = 4.000e-137
Identity = 261/316 (82.59%), Postives = 285/316 (90.19%), Query Frame = 0 
Query:   31 RVKAGLAQMLKGGVIMDVVDVEQARIAEAAGAVAVMALERIPADIRRDGGVARMSDPSMIKEIKAAVTIPVMAKARIGHFVEAQILEAIEVDYIDESEVLTMADEENHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLTSMDEDELFVYAKDIRAPLELVQEVARTGRLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNAAVLAEVSTNLGAPMVGISDIKGDAVNFRDREGGVVGGGDGVPPKKTLHGATETQLYGSSWKA 347
            RVKAGLAQMLKGGVIMDVV+VEQARIAE AGAVAVMALERIPADIR DGGVARMSDP MI+EIKAAV+IPVMAKARIGHFVEAQILE+IEVDYIDESEVLTMADE+NHINK KF+VPFVCGCR+LGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHAR VQ+EIR + SMDEDELFV+AK I+AP  LVQEVA+ GRLPVVNFAAGG+ATPADAALMMQLG+DGVFVGSGIFKS    +RA+AIVQA TH+++A +LAEVST LG  MVG+SDIKGDAVNFR REGG  G    +P K+ L G TETQLYGSSW+A
Sbjct:    2 RVKAGLAQMLKGGVIMDVVNVEQARIAEEAGAVAVMALERIPADIRVDGGVARMSDPKMIREIKAAVSIPVMAKARIGHFVEAQILESIEVDYIDESEVLTMADEDNHINKRKFQVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVQKEIRMVASMDEDELFVFAKQIQAPFSLVQEVAKNGRLPVVNFAAGGIATPADAALMMQLGVDGVFVGSGIFKSAHAAERAKAIVQATTHYKDAKILAEVSTGLGKAMVGVSDIKGDAVNFRGREGG--GSEGQIPKKRKLEGKTETQLYGSSWEA 315
[Close]
BLAST of NO26G01060 vs. NCBI_GenBank
Match: XP_002183347.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45047.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 495.7 bits (1275), Expect = 1.200e-136
Identity = 258/318 (81.13%), Postives = 286/318 (89.94%), Query Frame = 0 
Query:   27 VGTFRVKAGLAQMLKGGVIMDVVDVEQARIAEAAGAVAVMALERIPADIRRDGGVARMSDPSMIKEIKAAVTIPVMAKARIGHFVEAQILEAIEVDYIDESEVLTMADEENHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLTSMDEDELFVYAKDIRAPLELVQEVARTGRLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNAAVLAEVSTNLGAPMVGISDIKGDAVNFRDREGGVVGGGDGVPPKKTLHGATETQLYGSSW 345
            VGT RVK GLAQMLKGGVIMDV++VEQA+IAEAAGAVAVMALERIPADIRRDGGVARMSDP++IKEIK AVTIPVMAKARIGHFVEAQILEA E+DYIDESEVLTMAD+ +H++K ++ VPFVCGCR+LGEALRR+AEGA+MLRTKGEAGTGN+VEAVRHARTVQ EI+RL SM +DELFV AK++RAP ELV+EVA  G+LPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKS  PE+RARAIVQAVTH+++  VL EVST LG  MVGI+DIKGD VNFRDREGG       VPPKK LHG TETQ+YGSSW
Sbjct:   17 VGTDRVKQGLAQMLKGGVIMDVMNVEQAKIAEAAGAVAVMALERIPADIRRDGGVARMSDPALIKEIKNAVTIPVMAKARIGHFVEAQILEACEIDYIDESEVLTMADDVHHLDKTQYSVPFVCGCRNLGEALRRIAEGASMLRTKGEAGTGNIVEAVRHARTVQSEIKRLASMSKDELFVAAKELRAPYELVKEVAELGKLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSHNPEERARAIVQAVTHYKDPKVLMEVSTGLGPAMVGIADIKGDKVNFRDREGGEFAYEGKVPPKKDLHGYTETQMYGSSW 334
[Close]
BLAST of NO26G01060 vs. NCBI_GenBank
Match: EJK62766.1 (hypothetical protein THAOC_16609 [Thalassiosira oceanica])

HSP 1 Score: 491.9 bits (1265), Expect = 1.700e-135
Identity = 258/318 (81.13%), Postives = 283/318 (88.99%), Query Frame = 0 
Query:   27 VGTFRVKAGLAQMLKGGVIMDVVDVEQARIAEAAGAVAVMALERIPADIRRDGGVARMSDPSMIKEIKAAVTIPVMAKARIGHFVEAQILEAIEVDYIDESEVLTMADEENHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLTSMDEDELFVYAKDIRAPLELVQEVARTGRLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNAAVLAEVSTNLGAPMVGISDIKGDAVNFRDREGGVVGGGDGVPPKKTLHGATETQLYGSSW 345
            +GT +VK GLAQMLKGGVIMDV++VEQA+IAEAAGAVAVMALERIPADIRRDGGVARMSDPSMI EIK AVTIPVMAKARIGHFVEAQILEA EVDYIDESEVLTMADE NHI+KN+F VPFVCGCR++GEALRRVAEG AMLRTKGEAGTGN+VEAVRHARTVQ EI+RL+ M +DELFV AK+++AP ELV+ VA  GRLPVVNFAAGGVATPADAALMMQLG+DGVFVGSGIFKS +PE RA+AIV+AVTH+++  VL EVST LG  MVGI DIKGD VNFRDREGG       VPPKK LHG TETQ+YGSSW
Sbjct:   15 IGTSKVKQGLAQMLKGGVIMDVMNVEQAKIAEAAGAVAVMALERIPADIRRDGGVARMSDPSMILEIKNAVTIPVMAKARIGHFVEAQILEACEVDYIDESEVLTMADEVNHIDKNQFNVPFVCGCRNIGEALRRVAEGGAMLRTKGEAGTGNIVEAVRHARTVQGEIKRLSVMTKDELFVAAKELQAPYELVKYVADNGRLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSADPEARAKAIVKAVTHYKDPKVLMEVSTGLGPAMVGICDIKGDPVNFRDREGGEYTYSGKVPPKKELHGKTETQMYGSSW 332
[Close]
BLAST of NO26G01060 vs. NCBI_GenBank
Match: XP_002296881.1 (hypothetical protein THAPSDRAFT_42612 [Thalassiosira pseudonana CCMP1335] >EED86865.1 hypothetical protein THAPSDRAFT_42612 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 489.2 bits (1258), Expect = 1.100e-134
Identity = 258/318 (81.13%), Postives = 283/318 (88.99%), Query Frame = 0 
Query:   27 VGTFRVKAGLAQMLKGGVIMDVVDVEQARIAEAAGAVAVMALERIPADIRRDGGVARMSDPSMIKEIKAAVTIPVMAKARIGHFVEAQILEAIEVDYIDESEVLTMADEENHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLTSMDEDELFVYAKDIRAPLELVQEVARTGRLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNAAVLAEVSTNLGAPMVGISDIKGDAVNFRDREGGVVGGGDGVPPKKTLHGATETQLYGSSW 345
            VGT +VK GLAQMLKGGVIMDV++VEQA+IAEAAGAVAVMALERIPADIRRDGGVARMSDP+MI EIK AVTIPVMAKARIGH+VEAQILEA E+DYIDESEVLTMADE NHI+K +F VPFVCGCR++GEALRRVAEGAAMLRTKGEAGTGN+VEAVRHARTVQ +I+RLT M +DELFV AK+++AP ELV+ VA  GRLPVVNFAAGGVATPADAALMMQLG+DGVFVGSGIFKS  PE RA AIV+AVTH+++  VL EVST LG  MVGISDIKGDAVNFRDREGG       VPPK  LHGATETQ+YGSSW
Sbjct:   16 VGTDKVKMGLAQMLKGGVIMDVMNVEQAKIAEAAGAVAVMALERIPADIRRDGGVARMSDPAMILEIKNAVTIPVMAKARIGHYVEAQILEACEIDYIDESEVLTMADEVNHIDKTQFGVPFVCGCRNIGEALRRVAEGAAMLRTKGEAGTGNIVEAVRHARTVQSDIKRLTCMSKDELFVAAKNLQAPYELVKYVADNGRLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSANPEARAAAIVKAVTHYKDPKVLMEVSTGLGPAMVGISDIKGDAVNFRDREGGEYVYEGKVPPKVALHGATETQMYGSSW 333
[Close]
BLAST of NO26G01060 vs. NCBI_GenBank
Match: OEU17172.1 (vitamin B6 biosynthesis protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 484.2 bits (1245), Expect = 3.500e-133
Identity = 254/318 (79.87%), Postives = 279/318 (87.74%), Query Frame = 0 
Query:   27 VGTFRVKAGLAQMLKGGVIMDVVDVEQARIAEAAGAVAVMALERIPADIRRDGGVARMSDPSMIKEIKAAVTIPVMAKARIGHFVEAQILEAIEVDYIDESEVLTMADEENHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLTSMDEDELFVYAKDIRAPLELVQEVARTGRLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNAAVLAEVSTNLGAPMVGISDIKGDAVNFRDREGGVVGGGDGVPPKKTLHGATETQLYGSSW 345
            VGT  VK GLAQMLKGGVIMDV++VEQA++AEAAGAVAVMALERIPADIRRDGGVARMSDP MI+EIK AVTIPVMAKARIGHFVEAQILEA+EVD+IDESEVLTMAD+ +H++K ++ VPFVCGCRDLGEALRR+AEGA+MLRTKGEAGTGNVVEAVRHAR VQ +IRRL SM +DEL+V AK++RAP ELV++VA  G+LPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKS  PE RARAIVQA THFR+  VL E ST LG  MVGI DIK D VNFRDREGG       VPPKK LHG TETQ+YGSSW
Sbjct:   14 VGTSTVKQGLAQMLKGGVIMDVMNVEQAKLAEAAGAVAVMALERIPADIRRDGGVARMSDPLMIQEIKNAVTIPVMAKARIGHFVEAQILEALEVDFIDESEVLTMADDTHHLDKTQYNVPFVCGCRDLGEALRRIAEGASMLRTKGEAGTGNVVEAVRHARQVQGDIRRLKSMSKDELYVAAKEMRAPYELVKQVAEAGKLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSANPEARARAIVQATTHFRDPKVLVECSTGLGPAMVGICDIKADPVNFRDREGGEYTYEGKVPPKKELHGHTETQMYGSSW 331
[Close]
BLAST of NO26G01060 vs. NCBI_GenBank
Match: OQS00351.1 (pyridoxal biosynthesis lyase pdxS [Thraustotheca clavata])

HSP 1 Score: 478.8 bits (1231), Expect = 1.500e-131
Identity = 249/294 (84.69%), Postives = 272/294 (92.52%), Query Frame = 0 
Query:   28 GTFRVKAGLAQMLKGGVIMDVVDVEQARIAEAAGAVAVMALERIPADIRRDGGVARMSDPSMIKEIKAAVTIPVMAKARIGHFVEAQILEAIEVDYIDESEVLTMADEENHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLTSMDEDELFVYAKDIRAPLELVQEVARTGRLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNAAVLAEVSTNLGAPMVGISDIKGDAVNFRDREGGVVGG 322
            GTF VKAGLA+MLKGGVIMDV++VEQARIAE AGAVAVMALERIPADIR DGGVARMSDP MI+EIK AVTIPVMAK RIGHFVEAQILEAIE+DYIDESEVLTMADEENHINKNKFKVPFVCGCR+LGEALRR+AEGAAMLRTKGEAGTGNVVEAVRHAR VQREI+RLTSMDEDELFV AK+++AP ELV++VA TGRLPVVNFAAGGVATPADAALMMQLG+DGVFVGSGIFKS +P KRARA+VQAVTHFR++ +L E+ST+LG  MVGI D+K  +VNFRDREGG   G
Sbjct:   14 GTFLVKAGLAKMLKGGVIMDVINVEQARIAEEAGAVAVMALERIPADIRSDGGVARMSDPQMIEEIKKAVTIPVMAKCRIGHFVEAQILEAIEIDYIDESEVLTMADEENHINKNKFKVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARAVQREIKRLTSMDEDELFVAAKEMQAPYELVKQVAATGRLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPVKRARAMVQAVTHFRDSKILKEISTDLGEAMVGIQDLKASSVNFRDREGGAPHG 307
[Close]
BLAST of NO26G01060 vs. NCBI_GenBank
Match: OQR97603.1 (pyridoxal biosynthesis lyase pdxS [Achlya hypogyna])

HSP 1 Score: 476.1 bits (1224), Expect = 9.500e-131
Identity = 250/295 (84.75%), Postives = 272/295 (92.20%), Query Frame = 0 
Query:   26 AVGTFRVKAGLAQMLKGGVIMDVVDVEQARIAEAAGAVAVMALERIPADIRRDGGVARMSDPSMIKEIKAAVTIPVMAKARIGHFVEAQILEAIEVDYIDESEVLTMADEENHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLTSMDEDELFVYAKDIRAPLELVQEVARTGRLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNAAVLAEVSTNLGAPMVGISDIKGDAVNFRDREGGVVG 321
            A GTF VKAGLA+MLKGGVIMDVV+VEQARIAE AGAVAVMALERIPADIR DGGVARMSDP MI+ IK AVTIPVMAK RIGHFVEAQILEA+E+DYIDESEVLTMADEENHINKNKFKVPFVCGCR+LGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHAR+VQREI+RL SMDEDELFV AK+++AP ELV++VA TGRLPVVNFAAGGVATPADAALMMQLG+DGVFVGSGIFKS +P KRARA+VQAVTHFR+A +L E+ST+LG  MVGI D+K   VNFRDREGG+ G
Sbjct:   13 AEGTFLVKAGLAKMLKGGVIMDVVNVEQARIAEEAGAVAVMALERIPADIRADGGVARMSDPQMIEAIKKAVTIPVMAKVRIGHFVEAQILEAVEIDYIDESEVLTMADEENHINKNKFKVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARSVQREIKRLQSMDEDELFVAAKEMQAPYELVKQVAATGRLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPVKRARAMVQAVTHFRDAKILKEISTDLGEAMVGIQDLKKSNVNFRDREGGLHG 307
[Close]
BLAST of NO26G01060 vs. NCBI_GenBank
Match: XP_008901515.1 (pyridoxal biosynthesis lyase pdxS [Phytophthora parasitica INRA-310] >ETI52549.1 pyridoxal biosynthesis lyase pdxS [Phytophthora parasitica P1569] >ETK92451.1 pyridoxal biosynthesis lyase pdxS [Phytophthora parasitica] >ETL45845.1 pyridoxal biosynthesis lyase pdxS [Phytophthora parasitica] >ETL99006.1 pyridoxal biosynthesis lyase pdxS [Phytophthora parasitica] >ETN13503.1 pyridoxal biosynthesis lyase pdxS [Phytophthora parasitica INRA-310] >ETO81353.1 pyridoxal biosynthesis lyase pdxS [Phytophthora parasitica P1976] >ETP22418.1 pyridoxal biosynthesis lyase pdxS [Phytophthora parasitica CJ01A1] >ETP50300.1 pyridoxal biosynthesis lyase pdxS [Phytophthora parasitica P10297] >KUF80423.1 Pyridoxal biosynthesis lyase PdxS [Phytophthora nicotianae] >KUF97316.1 Threonine--tRNA ligase [Phytophthora nicotianae])

HSP 1 Score: 473.0 bits (1216), Expect = 8.000e-130
Identity = 247/293 (84.30%), Postives = 269/293 (91.81%), Query Frame = 0 
Query:   28 GTFRVKAGLAQMLKGGVIMDVVDVEQARIAEAAGAVAVMALERIPADIRRDGGVARMSDPSMIKEIKAAVTIPVMAKARIGHFVEAQILEAIEVDYIDESEVLTMADEENHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLTSMDEDELFVYAKDIRAPLELVQEVARTGRLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNAAVLAEVSTNLGAPMVGISDIKGDAVNFRDREGGVVG 321
            GTF VKAGLA+MLKGGVIMDV +VEQARIAE AGAVAVMALERIPADIR DGGVARMSDP MI+ IK AVTIPVMAK RIGHFVEAQILEA E+DYIDESEVLTMADEENHINKNKFKVPFVCGCR+LGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHAR+VQREIRRL SMDEDELFV AK+++AP ELV++VA TG+LPVVNFAAGGVATPADAALMMQLG+DGVFVGSGIFKS +P KRARA+VQAVTHF +A +L E+STNLG  MVG+ D+K  +VNFRDREGG+ G
Sbjct:   16 GTFLVKAGLAKMLKGGVIMDVTNVEQARIAEEAGAVAVMALERIPADIRVDGGVARMSDPQMIEAIKKAVTIPVMAKVRIGHFVEAQILEATEIDYIDESEVLTMADEENHINKNKFKVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARSVQREIRRLVSMDEDELFVAAKEMQAPYELVKQVATTGKLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPAKRARAMVQAVTHFNDAKILKEISTNLGEAMVGVQDLKAASVNFRDREGGLRG 308
The following BLAST results are available for this feature:
BLAST of NO26G01060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23151.11.700e-16490.49ethylene-inducible protein [Nannochloropsis gadita... [more]
EWM23152.11.700e-14093.62ethylene-inducible protein [Nannochloropsis gadita... [more]
CBJ30310.14.000e-13782.59conserved unknown protein [Ectocarpus siliculosus][more]
XP_002183347.11.200e-13681.13predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK62766.11.700e-13581.13hypothetical protein THAOC_16609 [Thalassiosira oc... [more]
XP_002296881.11.100e-13481.13hypothetical protein THAPSDRAFT_42612 [Thalassiosi... [more]
OEU17172.13.500e-13379.87vitamin B6 biosynthesis protein [Fragilariopsis cy... [more]
OQS00351.11.500e-13184.69pyridoxal biosynthesis lyase pdxS [Thraustotheca c... [more]
OQR97603.19.500e-13184.75pyridoxal biosynthesis lyase pdxS [Achlya hypogyna... [more]
XP_008901515.18.000e-13084.30pyridoxal biosynthesis lyase pdxS [Phytophthora pa... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005962NSK005962Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01060.1NO26G01060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|559169gene_7933Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100043g37gene7305Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01060.1NO26G01060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01060 ID=NO26G01060|Name=NO26G01060|organism=Nannochloropsis oceanica|type=gene|length=2632bp
ACACAGCATCAACCTTTGCAACTATCCAGCCATACCAAGCATCATGAACG
GGCACGCCAATTGCAACGGCAGTACCAACGGAGGCGCCTCCTCCTCCTCC
TCCACCACCTCGGCAGGGGCCGTAGGCACCTTCCGTGTAAAGGCCGGTTT
GGCCCAAATGCTCAAGGGCGGCGTTATTATGGgtacgtggatgtttggga
tttatgatggaggggtggaggagatgcacctgcgttgggaagggccccgc
tcgatagtgtccttgcgtgcagtcgctgagttggcagtcattcacagcgc
acccccggaccggctcacgaggtttggagaggaagtattggacctcgcct
cagtcatcgatggccatttttggtcttacgcccacccttccacccatgat
ccctccctgtcatgtccgccatcttcagtaagtcgtcagcacctactcac
ttcaactctttcccgccttcccctttcctaaaacaaacagATGTGGTAGA
CGTGGAGCAAGCTAGGATCGCTGAGGCCGCAGGGGCCGTGGCCGTCATGG
CCCTGGAGCGCATCCCTGCTGACATTCGACGGGATGGGGGCGTGGCCCGC
ATGAGCGACCCCTCTATGATCAAGGAGATCAAAGCCGCGGTGACTATTCC
CGTGATGGCGAAGgtgagtgagggaagatagacggagaaggagggagaag
aaggcaaagggggcagaatggagatgaagccaagggctgtgaggaaagat
acatgaaacaccattttagcagatagggacatcagagcgcgacatgtcgt
cgcaagtgctgatttcatagactttacgactgagccacggaaataaaaga
ggagattttattcgcaaaatatcgccaccgcactccaccttcagtcacac
actctttttacctccgatattcctacccctctcttctcacgtcagGCTCG
TATCGGCCATTTCGTGGAGGCCCAAATCCTGGAAGCAATCGAAGTGGACT
ACATCGATGAGTCCGAGGTCTTGACCATGGCGGACGAGGAGAATCATATA
AACAAGAACAAGTTCAAGGTGCCCTTCGTATGCGGCTGCCGGGACTTAGG
AGAGGCGTTGCGCCGGGTGGCAGAGGGCGCGGCTATGCTCCGCACAAAGG
GGGAGGCAGGAACGGGGAATGTGGTAGAAGCAGTGAGGCATGCGCGGACC
GTGCAACGGGAGATCAGACGACTCACCTCCATGGACGAAGACGAGCTCTT
CGTGTACGCCAAGGACATCCGTGCCCCGCTGGAGCTGGTGCAGGAGGTAG
CACGCACAGGAAGACTGCCGGTGGTCAATTTCGCGGCGGGGGGGGTAGCA
ACCCCAGCGGACGCAGCGCTGATGATGCAGTTGGGCTTGGACGGGGTTTT
TGTGGGCTCGGGCATTTTCAAGTCCACGGAGCCGGAGAAGAGGGCTCGGG
CGATCGTCCAGGCGGTGACTCACTTTAGGAACGCGGCTGTCTTGGCGGAG
GTGAGCACAAACCTGGGGGCACCAATGGTGGGGATCTCGGACATAAAGGG
CGACGCGGTGAATTTCAGGGACAGGGAGGGAGGGGTGGTGGGAGGGGGGG
ATGGGGTACCGCCCAAGAAGACGTTGCATGGCGCCACAGAGACACAGTTG
TATGGGAGTAGTTGGAAGGCGGGGCAGGCGGGGCATTAAGGGGAAAGAGA
GAGAGAGAGAGTGGCGGAGATGAGTGAAGGAGTTCCACATGTATACCCAC
GGACTTGGGAGCTGGAGCGATGGGGCAAAATAGAAATGGAAAGCAAGGAA
AGGGGAGACAGGGGGATGCAGGTGCGACGCGGAGGGTTATGAAATGGTAA
GGAGGATGGGGACGAGGACGACTACAAGGTCGACATCCTGAGCGATAGAA
AAAGTTCAAGCATAATGACGGGGAAGGGATATTGAGAAGAAATGGGGCAG
TAGTAGTCCCGGGCTCAGTGCTCTTGCAGATAGGATAATTTTGTTGTTGC
TCTTGTTAGATTTATTTAACACCAGAAAAGAAGGAGAAGAAGGACGGCGA
CAGAAAGGATGACTCAGTTTTCGTATCTGCCACTGTGTGGCCTGCCTTCG
CATTTTATAGAAATACAAGGAGAGATACAAGTAGGGACATCCGAATGTAC
GGCTATTCTCCCTTGTAATCTGTTTGCTGTGACATTCATGCTGGGGGGAA
GATGGAGAGGGCTGATTCAAGGAACAGCAAAAGATAGGTGGTGCGAATGA
ATTCAACAGTCTCCCCATGCCCAACTTAGGTTGAAGTGTCGAGCTAAGAG
AGAGGCGAGGGGAGAGAGAGGAAGGGGGAGAAATGCACGAAAAAGGCCGA
GACGCTTGCGCGTGTTGGCGAGTGTATGCGATTGTGTATGTGTGTGCGTC
TGACGGACAAGTTAGGAAAGAGCAAGACAAAGGCCAGTGTGTGGATCAAG
AGAAGTGGGAGACGTGTGAGAGGGGGGGGTAAAGTCGGGTTCAGAGGGAG
GGACCAGCGGGAAGTCGAATCAAGCGTCGAACCGTCTCCGAGCAAAAGCC
AGTTTCCCTTTTCCATATATAGGTGTGCTACAATCGATATGATAAAACGA
AATAGAGAACGAAGCATGAAATTAAAACACAA
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protein sequence of NO26G01060.1

>NO26G01060.1-protein ID=NO26G01060.1-protein|Name=NO26G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=352bp
MNGHANCNGSTNGGASSSSSTTSAGAVGTFRVKAGLAQMLKGGVIMDVVD
VEQARIAEAAGAVAVMALERIPADIRRDGGVARMSDPSMIKEIKAAVTIP
VMAKARIGHFVEAQILEAIEVDYIDESEVLTMADEENHINKNKFKVPFVC
GCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLTSM
DEDELFVYAKDIRAPLELVQEVARTGRLPVVNFAAGGVATPADAALMMQL
GLDGVFVGSGIFKSTEPEKRARAIVQAVTHFRNAAVLAEVSTNLGAPMVG
ISDIKGDAVNFRDREGGVVGGGDGVPPKKTLHGATETQLYGSSWKAGQAG
H*
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Synonyms
Publications