NO26G00990, NO26G00990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00990 vs. NCBI_GenBank
Match: EWM23164.1 (fact complex subunit ssrp1 [Nannochloropsis gaditana]) HSP 1 Score: 889.0 bits (2296), Expect = 9.800e-255 Identity = 570/651 (87.56%), Postives = 610/651 (93.70%), Query Frame = 0 Query: 3 AIVEKFENIGLSGQSVGTLTFTEKGVEWRGPSNAKAVQAKDILRATWCIFGKWGHLRLFLRNGKALRCDGFVRTQEERVKEIFGTNYSLALEREALASGGANYGDLIFEDNTLVMALEDKAVLELPLGAVSQCVLPGTGNVKNEVELQFIETDAADRDEDALVEVRFYIPPGEEEESGAEVFQKNVLARTNVQASTGDALVTFAEDEGFFLYPRGRYVINLYANSFRLHGSKYDHKMAYDDIIHFFLLERPDHRWAFVIGLKKPIRQGQQRYNYLVLQTHDGVSEVTVNMTEDELKEKYEDRLEQAMGGPMHHLVAKTFKVLSGKKVYHSQRFESARNVRWIKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVAFDRVGGAVGVTRSFDLKITMKPLDGDVRREYVFAQIDKEEHATLSQYLRDKQTIRVIDDKPVSQAKIDRMLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDPNAPKKSLSGYMLFTQASREQLKVEQPSLKVTEVSKVMGERWRGMSAEEKKPFEDQAKEAKIKYLEDVQAYK 654 A +EKFENIGLSGQSVGTLTFT KG+EWRGPSNAK VQAKDILRA+W +FGKWGHLRLFL+NGKALRCDGF+RT+EERV+E+F +NYSL+LERE L SGGANYGDLIFEDNTLVM+LEDK VLELPLGAVSQCVLPGTGN+KNEVELQF+ETDAADRDED LVEVRFYIPPGEEE+ GAE FQKNVLART VQASTGDALVTFAEDEGFFLYPRGRYVINLY NSFRLHG+KYDHKMAYDDIIHFFLLERPDHRWAFVIGLKKPIRQGQQRYNYLVLQTHDG SEVTVNMTE+EL+EKYEDRLEQ M GPMHHLVAKTFK+LSGKKVYHSQRF+SARNVRW+KCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESV+FDRVGGAVGVTR+FDL++ ++PLDGDVRREY+FAQI+KEEHA LSQYLRDKQTI+VIDDKPVSQAKIDRML XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NAPK++LS YMLFTQASRE +K EQP LKVTE+SKVMGERWR +SAEEKK FEDQA AK++Y E+++AYK Sbjct: 2 ATIEKFENIGLSGQSVGTLTFTGKGLEWRGPSNAKTVQAKDILRASWSVFGKWGHLRLFLKNGKALRCDGFLRTEEERVREVFQSNYSLSLEREVLNSGGANYGDLIFEDNTLVMSLEDKPVLELPLGAVSQCVLPGTGNIKNEVELQFVETDAADRDEDTLVEVRFYIPPGEEEDDGAEAFQKNVLARTTVQASTGDALVTFAEDEGFFLYPRGRYVINLYTNSFRLHGAKYDHKMAYDDIIHFFLLERPDHRWAFVIGLKKPIRQGQQRYNYLVLQTHDGASEVTVNMTEEELREKYEDRLEQTMAGPMHHLVAKTFKILSGKKVYHSQRFQSARNVRWVKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVSFDRVGGAVGVTRTFDLRVLLRPLDGDVRREYIFAQIEKEEHANLSQYLRDKQTIKVIDDKPVSQAKIDRML----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAPKQALSAYMLFTQASREAVKAEQPGLKVTEISKVMGERWRALSAEEKKVFEDQAASAKVRYGEELRAYK 642
BLAST of NO26G00990 vs. NCBI_GenBank
Match: CBJ29726.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 372.5 bits (955), Expect = 3.100e-99 Identity = 285/654 (43.58%), Postives = 395/654 (60.40%), Query Frame = 0 Query: 8 FENIGLSGQSVGTLTFTEKGVEWRG--PSNAKAVQAKDILRATWCIFGKWGHLRLFL-RNGKALRCDGFVRTQEERVKEIFGTNYSLALEREALASGGANYGDLIFEDNTLVMALEDKAVLELPLGAVSQCVLPGTGNVKNEVELQFIETDAADRDEDALVEVRFYIPPGEE---EESGAEVFQKNVLARTNVQASTGDALVTFAEDEGFFLYPRGRYVINLYANSFRLHGSKYDHKMAYDDIIHFFLLERPDHRW-AFVIGLKKPIRQGQQRYNYLVLQTHDGVSEVTVNMTEDELKEKYEDRLEQAMGGPMHHLVAKTFKVLSGKKVYHSQRFESARNVRWIKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVAFDRVGGA--VGVTRSFDLKITMKPLDGDVRREYVFAQIDKEEHATLSQYLRDKQTIRVIDDKPVSQAKIDRMLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDPNAPKKSLSGYMLFTQASREQLKVEQPSLKVTEVSKVMGERWRGMSAEEKKPFEDQAKEAKIKYLEDVQAY 653 F IG+ G S+G L T + + W S++K V+ D+ ATW + + HLRLF+ R+ + +R DGF + Q + E F + ++L E+ GG NYGD+ DN + + +K + +L + VSQCV+PG N+VELQ E+DA D+ ED LV +R +P +E E S AE Q V+ R N+ G LV F E +G F +PRGRY + +Y++ R+HGS+YD+K+ Y+DI FLLE+PD R+ AFVI L KPIRQGQQ+Y +LVL+T + +TVNM+ ++L++KY+ L M GP+H+L+AK FKVLS K VY + +F S + +KC+L A+EG LYPL+K+F+FI+KPT I F +IESV F R GGA GVTR+FDL + K + G+ + YVF+ ID+ E+++L +L K+ +R+ K + ++ D + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX D +APK ++S +M F+QA+R Q+K + P LKVTE+SKV+GE+W + +KKP++D+A E K +Y + AY Sbjct: 3 FSKIGVQGYSLGNLQLTAEELNWTSDDKSSSKKVKWLDVSHATWAQYAAYCHLRLFMKRDARPVRLDGFSKAQHADI-EKFLSERDVSLSNESPNPGGGNYGDIEVLDNIVRFSSGNKTLFDLNIKDVSQCVMPGV-KKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKK-LRI---KNIKESGNDNAM------------------------------LQLGDLDDHDPYKAALDDDQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHKTSKKRPGTGSAKKGXXXXXXXXXXXXXXXXXXXXXXXXDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAY 620
BLAST of NO26G00990 vs. NCBI_GenBank
Match: OEU20514.1 (SSrecog-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 336.3 bits (861), Expect = 2.500e-88 Identity = 190/433 (43.88%), Postives = 268/433 (61.89%), Query Frame = 0 Query: 37 KAVQAKDILRATWCIFGKWGHLRL--FLRNGK----ALRCDGFVRTQEERVKEIFGTNYSLALEREALASGGANYGD-------LIFEDNTLVMALEDKAVLELPLGAVSQCVLPGTGNVKNEVELQFIETDAADRDEDALVEVRFYIPPGEE-------EESGAEVFQKNVLARTNVQASTGDALVTFAEDEGFFLYPRGRYVINLYANSFRLHGSKYDHKMAYDDIIHFFLLERPDH-RWAFVIGLKKPIRQGQQRYNYLVLQTHDGVSEVTVNMTEDELKEKYEDRLEQAMGGPMHHLVAKTFKVLSGKKVYHSQRFESARNVRWIKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVAFDRVGGAVGVTRSFDLKITMKPLDGDV--RREYVFAQIDKEEHATLSQYLRDKQTIRVIDDKPVSQA 447 K + +I +A W +FGK GHLR+ ++ GK LR DGF + +K+ F NY + + + ++S G YG L+F+ + D+ ++ L LG VSQCVLP GN +NEVELQF E+DA + + D LV VR YIPP E ++ AE+ Q ++ N++ +TGD +V F ++G FL PRGRY I LY FR+ G KYD+K+ YDDI FLL +PD AFVI L KPIRQGQQRY YLVLQT+ EV VN+ ED LK++Y D L+ M G + +LVAKTFKV++ KKV+ +F +A +KC+L+A+EGLLYPL+K F+FI+KP + I F ++ESV F R G G TR+FDL +T+K + ++EYVF+ ID+ ++ L +L K +IR+ + + +S A Sbjct: 1 KNIPKGNIEKAGWTVFGKSGHLRIGVIVKEGKNGPSELRFDGFPVASFDDLKDFFQENYDIEVSKHNISSAGTQYGQSKISGKKLLFQHCEFEVRTGDE-MMSLDLGEVSQCVLP--GNNRNEVELQFPESDAIEANNDQLVSVRLYIPPDPEVDPSDKTAKTSAELLQHRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQRYAGGQGSTRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTK-SIRIKNLQEISGA 429
BLAST of NO26G00990 vs. NCBI_GenBank
Match: GAX21600.1 (structure-specific recognition protein 1 [Fistulifera solaris]) HSP 1 Score: 335.5 bits (859), Expect = 4.200e-88 Identity = 184/466 (39.48%), Postives = 272/466 (58.37%), Query Frame = 0 Query: 8 FENIGLSGQSVGTLTFTEKGVEWRGP-------------SNAKAVQAKDILRATWCIFGKWGHLRLFLRNGK---ALRCDGFVRTQEERVKEIFGTNYSLALEREALASGGANYG----------------DLIFEDNTLVMALEDKAVLELPLGAVSQCVLPGTGNVKNEVELQFIETDAADRDEDALVEVRFYIPPGEEEE-------SGAEVFQKNVLARTNVQASTGDALVTFAEDEGFFLYPRGRYVINLYANSFRLHGSKYDHKMAYDDIIHFFLLERPDH-RWAFVIGLKKPIRQGQQRYNYLVLQTHDGVSEVTVNMTEDELKEKYEDRLEQAMGGPMHHLVAKTFKVLSGKKVYHSQRFESARNVRWIKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVAFDRVGGAVGVTRSFDLKITMKPLDGDVRREYVFAQIDKEEHATLSQYLRDKQ 434 +++IGL G S+GTL+ ++ + W+G + + + A I A W +FG+ GHLR+ +++ K LR DGF + +K+ Y++A++ ++S G YG D + E+ + ++ L L VSQCVLP GN +NE+E+QF E+DA + D LV +RFYIPP + + + AE+ Q ++A V+ +TGD + TF +G FL PRGRY + LY RL G KYD+K+ YDDI FLL +PD AFVI L KPIRQGQQRY YLVLQ EVT+ + ED L+++Y+ L+ M G + +L+AKTFKV+SGKKV+ +F ++ +KC+++A+EGLLYPL+K F+FI+KP + I F +IESV F R G G TR+FDL + +K + +EY+F+ ID+ ++A L +L KQ Sbjct: 9 WKHIGLHGHSMGTLSLLKERITWKGALTGGGAADDEYQGTMVRNIPASAIKGAQWTVFGRSGHLRIQIQDEKLPHELRFDGFPAQDVDILKDALQQQYNIAMQLHTMSSAGTQYGLTSVQGKQLLFRHCVLDEMNEEGQEFEPRPEHEMMSLNLAEVSQCVLP--GNNRNEIEVQFPESDAVEAGTDQLVSIRFYIPPDLDADPSDKTAPTAAELLQAKIMATAQVRKTTGDVICTFDAAKGTFLTPRGRYGMELYDRFLRLRGQKYDYKIKYDDINRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQYLVLQAPKDPDEVTIALDEDTLEKEYKGELQPVMRGSLSNLIAKTFKVISGKKVFIPGKFANSNEQACVKCAVRANEGLLYPLEKQFVFIHKPPIIIRFNEIESVEFQRYAGGQGSTRNFDLCVNLKDPEQSSTKEYIFSGIDRSDYAGLYNFLNGKQ 472
BLAST of NO26G00990 vs. NCBI_GenBank
Match: GAX14828.1 (structure-specific recognition protein 1 [Fistulifera solaris]) HSP 1 Score: 333.2 bits (853), Expect = 2.100e-87 Identity = 185/466 (39.70%), Postives = 273/466 (58.58%), Query Frame = 0 Query: 8 FENIGLSGQSVGTLTFTEKGVEWRGP-------------SNAKAVQAKDILRATWCIFGKWGHLRLFLRNGK---ALRCDGFVRTQEERVKEIFGTNYSLALEREALASGGANYG----------------DLIFEDNTLVMALEDKAVLELPLGAVSQCVLPGTGNVKNEVELQFIETDAADRDEDALVEVRFYIPPGEEEE-------SGAEVFQKNVLARTNVQASTGDALVTFAEDEGFFLYPRGRYVINLYANSFRLHGSKYDHKMAYDDIIHFFLLERPDH-RWAFVIGLKKPIRQGQQRYNYLVLQTHDGVSEVTVNMTEDELKEKYEDRLEQAMGGPMHHLVAKTFKVLSGKKVYHSQRFESARNVRWIKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVAFDRVGGAVGVTRSFDLKITMKPLDGDVRREYVFAQIDKEEHATLSQYLRDKQ 434 +++IGL G S+GTL+ T++ + W+G + + + A I A W +FG+ GHLR+ +++ K LR DGF + +K+ Y++A++ ++S G YG D I E+ + ++ L L VSQCVLP GN +NE+E+QF E+DA + D LV +RFYIPP + + + AE+ Q ++A V+ +TGD + TF +G FL PRGRY + LY RL G KYD+K+ YDDI FLL +PD AFVI L KPIRQGQQRY YLVLQ EVT+ + E+ L+++Y+ L+ M G + +L+AKTFKV+SGKKV+ +F ++ +KC+++A+EGLLYPL+K F+FI+KP + I F +IESV F R G G TR+FDL + +K + +EY+F+ ID+ ++A L +L KQ Sbjct: 8 WKHIGLHGHSMGTLSLTKERITWKGALTGGGTADDDFQGTMVRNIPALSIKGAQWTVFGRSGHLRIQIQDDKLPHELRFDGFPAQDIDILKDALQQQYNIAMQLHPMSSAGTQYGLTSVKGKQLVFRHCVLDEINEEGQEFEPRPEHEMMSLNLAEVSQCVLP--GNNRNEIEVQFPESDAVEAGTDQLVSIRFYIPPDLDADPSDKTAPTAAELLQAKIMATAQVRKTTGDVICTFDAAKGTFLTPRGRYGMELYDRFLRLRGQKYDYKIKYDDINRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQYLVLQAPKDPDEVTIALDEETLEKEYKGELQPVMRGSLSNLIAKTFKVISGKKVFIPGKFANSNEQACVKCAVRANEGLLYPLEKQFVFIHKPPIIIRFNEIESVEFQRYAGGQGSTRNFDLCVNLKDPEQST-KEYIFSGIDRSDYAGLYNFLNGKQ 470
BLAST of NO26G00990 vs. NCBI_GenBank
Match: EJK70063.1 (hypothetical protein THAOC_08612 [Thalassiosira oceanica]) HSP 1 Score: 322.8 bits (826), Expect = 2.800e-84 Identity = 186/470 (39.57%), Postives = 272/470 (57.87%), Query Frame = 0 Query: 6 EKFENIGLSGQSVGTLTFTEKGVEWRGP-------SNAKAVQAKDILRATWCIFGKWGHLRLFL---RNGK------ALRCDGFVRTQEERVKEIFGTNYSLALEREALASGGANYGD-------LIFEDNTLVMALED---------KAVLELPLGAVSQCVLPGTGNVKNEVELQFIETDAADRDEDALVEVRFYIPPGEEEE-------SGAEVFQKNVLARTNVQASTGDALVTFAEDEGFFLYPRGRYVINLYANSFRLHGSKYDHKMAYDDIIHFFLLERPDHRW-AFVIGLKKPIRQGQQRYNYLVLQTHDGVSEVTVNMTEDELKEKYEDRLEQAMGGPMHHLVAKTFKVLSGKKVYHSQRFESARNVRWIKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVAFDRVGGAVGVTRSFDLKITMKPLDGD--VRREYVFAQIDKEEHATLSQYLRDKQ 434 + +++IGL G +VGT + T G+ W+ + + + I A W +FGK GHLR+ R G+ A+R DGF T E + E + + L+R +++S G+++G+ L+F L A ED ++ L LG VSQCVLP GN +NE+E+QF+E+D + D LV +RFY+PP + + + AE Q ++ +V+ ++G + F E +G FL PRGRY I LY + RL G+KYD+K+ YDDI FLL R D AFVI L KPIRQGQQRYN LV+Q SE+ +N+ E L+++Y ++EQ M G +LVAKTFKV++ KKV+ +F ++ +KC+L+A+EG LYPL+K F+FI+KP + I F +IESV F R G G TR+FDL +++ GD +EY F+ IDK +A L +L K+ Sbjct: 6 KSWKHIGLYGHAVGTFSATRHGIMWKSSVMGNDDIETKRVLPRESISGALWTVFGKSGHLRVLTKAPREGEQTKLPAAMRFDGFPGTDYEAMSEALRDLFGVTLKRHSMSSAGSSWGNTDISNKHLVFRQCNLEDADEDGQEFEPRDGDEMMSLDLGEVSQCVLP--GNNRNEIEMQFLESDTVEAGTDQLVALRFYVPPDADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTKEHSELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGSTRNFDLCVSLHSTPGDSASTKEYTFSGIDKSNYAALYSFLSGKK 473
BLAST of NO26G00990 vs. NCBI_GenBank
Match: XP_009537818.1 (hypothetical protein PHYSODRAFT_348389 [Phytophthora sojae] >EGZ07054.1 hypothetical protein PHYSODRAFT_348389 [Phytophthora sojae]) HSP 1 Score: 318.5 bits (815), Expect = 5.300e-83 Identity = 172/427 (40.28%), Postives = 259/427 (60.66%), Query Frame = 0 Query: 15 GQSVGTLTFTEKGVEWRG--PSNAKAVQAKDILRATWCIFG-KWGHLRLFLRNGKALRCDGFVRTQEERVKEIFGTNYSLALEREALASGGANYGDLIFEDNTLVMALEDKAVLELPLGAVSQCVLPGTGNVKNEVELQFIETDAADRDEDALVEVRFYIPP--GEEEESGAEVFQKNVLARTNVQASTGDALVTFAEDEGFFLYPRGRYVINLYANSFRLHGSKYDHKMAYDDIIHFFLLERPDH-RWAFVIGLKKPIRQGQQRYNYLVLQTHDGVSEVTVNMTEDELKEKYEDRLEQAMGGPMHHLVAKTFKVLSGKKVYHSQRFESARNVRWIKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVAFDRVGGAVG--VTRSFDLKITMKPLDGDVRREYVFAQIDKEEHATLSQYLRDKQ 434 G S G L + G+ WR + K + DI+ W G K HL+++ + GK +R G +++K +++ LE+E +A+GG N+GD+ FE L + +V+ELPL +SQC LPG KNEVELQF E D DE+ LVE+R Y+PP GE+E AE F++ VL + N+++ G ++V E G FL PRGRY + +Y + R+HG +D+K+ Y +I FLLE P+ AFVI L++PIRQG+Q Y +LVLQ + VNM+ +E+K KY + + M G + +VA FK + GKKVY S +F++ R +KC++KA G+L+PL+K+FMFI+KPT +I +++I+ + F R G G +R+FDL ++ K + G+ REY+F+ ID+ E LSQ+L K+ Sbjct: 12 GHSAGVLVLSASGLLWRSRTTESQKKLLKDDIVTLLWTPVGPKTHHLKVYQKGGKYVRFTGLKAQDVQQLKSHVESHFDRELEQEKVAAGGGNWGDMKFEGPNLNFRTSNASVMELPLEQISQCALPG----KNEVELQFHEDDTVAGDEETLVEMRLYLPPGDGEDEVVTAEEFRQQVLEKANIRSVMGKSIVDLDESIGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGLNTAFVISLEEPIRQGKQGYPHLVLQLSKNDVHIDVNMSAEEIK-KYNGNIHERMSGALPQIVATLFKFIIGKKVYTSGKFKTHSGDRAVKCAVKAQSGVLFPLEKSFMFIHKPTTFIRYEEIDYIEFQRYAGQSGSSASRNFDLLVSCKSVGGEAAREYIFSAIDRREFPELSQFLTSKK 433
BLAST of NO26G00990 vs. NCBI_GenBank
Match: XP_002899348.1 (FACT complex subunit SSRP1, putative [Phytophthora infestans T30-4] >EEY62317.1 FACT complex subunit SSRP1, putative [Phytophthora infestans T30-4]) HSP 1 Score: 317.8 bits (813), Expect = 9.000e-83 Identity = 173/427 (40.52%), Postives = 257/427 (60.19%), Query Frame = 0 Query: 15 GQSVGTLTFTEKGVEWRG--PSNAKAVQAKDILRATWCIFG-KWGHLRLFLRNGKALRCDGFVRTQEERVKEIFGTNYSLALEREALASGGANYGDLIFEDNTLVMALEDKAVLELPLGAVSQCVLPGTGNVKNEVELQFIETDAADRDEDALVEVRFYIPP--GEEEESGAEVFQKNVLARTNVQASTGDALVTFAEDEGFFLYPRGRYVINLYANSFRLHGSKYDHKMAYDDIIHFFLLERPDH-RWAFVIGLKKPIRQGQQRYNYLVLQTHDGVSEVTVNMTEDELKEKYEDRLEQAMGGPMHHLVAKTFKVLSGKKVYHSQRFESARNVRWIKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVAFDRVGGAVG--VTRSFDLKITMKPLDGDVRREYVFAQIDKEEHATLSQYLRDKQ 434 G S G L + G+ WR + K + DI+ W G K HL+++ + GK +R G ++K ++ LE+E +A+GG N+GD+ FE L + +V+ELPL +SQC LPG KNEVELQF E D DE+ LVE+R Y+PP GEEE AE F++ VL + N+++ G ++V E G FL PRGRY + +Y + R+HG +D+K+ Y +I FLLE P+ AFVI L++PIRQG+Q Y +LVLQ + VNM+ +E+K KY + + M G + +VA FK + GKKVY S +F++ R +KC++KA G+L+PL+K+FMFI+KPT +I +++I+ + F R G G +R+FDL ++ K + G+ REY+F+ ID+ E LSQ+L K+ Sbjct: 12 GHSAGVLVLSASGLLWRSRTTESQKKLLKDDIVTLLWTPVGPKTHHLKVYQKGGKYVRFTGLKAQDVAQLKSHVEIHFDRELEQEKVAAGGGNWGDMKFEGPNLNFRTANASVMELPLEQISQCALPG----KNEVELQFHEDDTVAGDEETLVEMRLYLPPGDGEEEVVTAEEFRQEVLEKANIRSVMGKSIVDLDETIGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGINTAFVISLEEPIRQGKQGYPHLVLQLSKNDVHIDVNMSSEEIK-KYNGNIHERMSGALPQIVATLFKFIIGKKVYTSGKFKTHSGERAVKCAVKAQSGVLFPLEKSFMFIHKPTTFIRYEEIDYIEFQRYAGQSGSSASRNFDLLVSCKSVGGEAAREYIFSAIDRREFPELSQFLTSKK 433
BLAST of NO26G00990 vs. NCBI_GenBank
Match: XP_002290767.1 (structure specific recognition protein 1 [Thalassiosira pseudonana CCMP1335] >EED92519.1 structure specific recognition protein 1 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 316.2 bits (809), Expect = 2.600e-82 Identity = 171/408 (41.91%), Postives = 251/408 (61.52%), Query Frame = 0 Query: 44 ILRATWCIFGKWGHLRLFLRN--------GKALRCDGFVRTQEERVKEIFGTNYSLALEREALASGGANYGDLIFEDNTLVMALEDKAVLELPLGAVSQCVLPGTGNVKNEVELQFIETDAADRDEDALVEVRFYIPPGEEEE-------SGAEVFQKNVLARTNVQASTGDALVTFAEDEGFFLYPRGRYVINLYANSFRLHGSKYDHKMAYDDIIHFFLL-ERPDHRWAFVIGLKKPIRQGQQRYNYLVLQTHDGVSEVTVNMTEDELKEKYEDRLEQAMGGPMHHLVAKTFKVLSGKKVYHSQRFESARNVRWIKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVAFDRVGGAVGVTRSFDLKITMKPLDGD--VRREYVFAQIDKEEHATLSQYLRDKQ 434 I A W IFGK GHLR+ + ALR DGF + +R+ E F T Y + L+R +++S GA++G+ + L + + +L L LG VSQCVLP GN +NE+E+QF+E+D + D LV +RFY+PP ++ + + AE+ Q + +V+ ++G + F E++G FL PRGRY I LY + RL G+KYD+K+ YDDI FLL ++ D AFVI L KPIRQGQQRYN LV+Q SE+ +N+ + ++++Y ++ M G +LVAKTFKV++ KKV+ +F +A +KC+L+A+EG LYPL+K F+FI+KP + I F +IESV F R G G TR+FDL +++ GD +EY F+ IDK +A+L +L K+ Sbjct: 18 IAGALWTIFGKSGHLRVLTKTLEGSKTKLPAALRFDGFPPSDFDRLTEAFQTMYGITLKRHSMSSAGASWGNTDIANKHLFEPRDGEEMLSLDLGEVSQCVLP--GNNRNEIEMQFLESDTVEAGTDQLVAIRFYVPPDQDADPTDKDAPTSAELLQSRITEVASVKKTSGAIIAEFDENKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPKQDDMHMAFVIALDKPIRQGQQRYNMLVMQCTKEQSELNINLDDATIEKEYNGEIQAHMNGSFSNLVAKTFKVITKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGSTRNFDLSVSLINTPGDNLAVKEYTFSGIDKTNYASLYSFLSQKK 423
BLAST of NO26G00990 vs. NCBI_GenBank
Match: POM80838.1 (FACT complex subunit SSRP1 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 315.5 bits (807), Expect = 4.500e-82 Identity = 171/427 (40.05%), Postives = 258/427 (60.42%), Query Frame = 0 Query: 15 GQSVGTLTFTEKGVEWRG--PSNAKAVQAKDILRATWCIFG-KWGHLRLFLRNGKALRCDGFVRTQEERVKEIFGTNYSLALEREALASGGANYGDLIFEDNTLVMALEDKAVLELPLGAVSQCVLPGTGNVKNEVELQFIETDAADRDEDALVEVRFYIPP--GEEEESGAEVFQKNVLARTNVQASTGDALVTFAEDEGFFLYPRGRYVINLYANSFRLHGSKYDHKMAYDDIIHFFLLERPDH-RWAFVIGLKKPIRQGQQRYNYLVLQTHDGVSEVTVNMTEDELKEKYEDRLEQAMGGPMHHLVAKTFKVLSGKKVYHSQRFESARNVRWIKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVAFDRVGGAVG--VTRSFDLKITMKPLDGDVRREYVFAQIDKEEHATLSQYLRDKQ 434 G S G L + G+ WR + K + DI+ W G K HL+++ + GK +R G ++K +++ LE+E +A+GG N+GD+ FE L + +V+ELPL +SQC LPG KNEVELQF E D DE+ LVE+R Y+PP G++E AE F++ VL + N+++ G ++V E G FL PRGRY + +Y + R+HG +D+K+ Y +I FLLE P+ AFVI L++PIRQG+Q Y +LVLQ + VNM+ +E+K KY + + M G + +VA FK + GKKVY S +F++ R +KC++KA G+L+PL+K+FMFI+KPT +I +++I+ + F R G G +R+FDL ++ K + G+ REY+F+ ID+ E LSQ+L K+ Sbjct: 12 GHSAGVLVLSASGLLWRSRTTESQKKLLKDDIVTLLWTPVGPKTHHLKVYQKGGKYVRFTGLKAQDVAQLKSHVESHFDRELEQEKVAAGGGNWGDMKFEGPNLNFRTANASVMELPLEQISQCALPG----KNEVELQFHEDDTVAGDEETLVEMRLYLPPGDGDDEVVTAEEFRQEVLEKANIRSVMGKSIVDLDETIGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGINTAFVISLEEPIRQGKQGYPHLVLQLSKNDVHIDVNMSAEEIK-KYNGNIHERMSGALPQIVATLFKFIIGKKVYTSGKFKTHSGDRAVKCAVKAQSGVLFPLEKSFMFIHKPTTFIRYEEIDYIEFQRYAGQSGSSASRNFDLLVSCKSVGGEAAREYIFSAIDRREFPELSQFLTSKK 433 The following BLAST results are available for this feature:
BLAST of NO26G00990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00990 ID=NO26G00990|Name=NO26G00990|organism=Nannochloropsis oceanica|type=gene|length=3179bpback to top protein sequence of NO26G00990.1 >NO26G00990.1-protein ID=NO26G00990.1-protein|Name=NO26G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=738bpback to top Synonyms
Publications
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