NO26G00980, NO26G00980 (gene) Nannochloropsis oceanica

Overview
NameNO26G00980
Unique NameNO26G00980
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1140
Alignment locationchr26:320684..321823 -

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Properties
Property NameValue
DescriptionProtein phosphatase 2c-related protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:320684..321823 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
GO:0016787hydrolase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR036457PPM-type_dom_sf
IPR015655PP2C
IPR001932PPM-type_phosphatase_dom
Homology
BLAST of NO26G00980 vs. NCBI_GenBank
Match: EWM23175.1 (protein phosphatase 2c-related protein [Nannochloropsis gaditana])

HSP 1 Score: 446.8 bits (1148), Expect = 6.600e-122
Identity = 226/295 (76.61%), Postives = 251/295 (85.08%), Query Frame = 0
Query:   87 AIKGTLYPASGTFRGVSVAEEMNPLRRSTMEDVHRVLPVFDDDASMSFVGIYDGHGGRDIVDFLSTELEKNIAQELKVEDGASIPDKLARAYILTDVQSCQAELMGSGATAVTCLIKKSMVEREDGREEQIREIYAANVGDSRAVLCREGRGVRLSYDHKADDGAEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVREE--EEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGRVDVDAAGLLVQEAMRRGSSDNITCVVVFL 380
            +IKGT+YPASGTF+GVSVAEEMNPLRRSTMEDVHRVLPVFD DA MSFVGIYDGHGGRDIVDFL+TELEKN+A+ELKVEDGAS+P++L RAY+LTDVQS QAELMGSGATAVTCLIK       +G  E +REIY ANVGDSRAVLC +G+G+RL+YDHKA+D  EQARIEAAGGFVLR+RVLGILAVTRSFGDHR+KDYV+G+PYTSTT+V +   EE               FLILACDGVWDVLSDDEAVGLV   WE EG R +VDAAGLLVQEAMRRGSSDNITC+VV L
Sbjct:   91 SIKGTIYPASGTFKGVSVAEEMNPLRRSTMEDVHRVLPVFDGDACMSFVGIYDGHGGRDIVDFLATELEKNVARELKVEDGASVPERLERAYLLTDVQSRQAELMGSGATAVTCLIKARREGEGEGAGETVREIYTANVGDSRAVLCHQGKGMRLTYDHKAEDKGEQARIEAAGGFVLRSRVLGILAVTRSFGDHRMKDYVIGVPYTSTTIVEDSTPEE-------------SPFLILACDGVWDVLSDDEAVGLVRGQWEREGRRPEVDAAGLLVQEAMRRGSSDNITCIVVLL 372          
BLAST of NO26G00980 vs. NCBI_GenBank
Match: CBJ26526.1 (protein phosphatase 2C-like domain-containing protein [Ectocarpus siliculosus])

HSP 1 Score: 265.4 bits (677), Expect = 2.700e-67
Identity = 141/283 (49.82%), Postives = 192/283 (67.84%), Query Frame = 0
Query:   96 SGTFRGVSVAEEMNPLRRSTMEDVHRVLPVFDDDASMSFVGIYDGHGGRDIVDFLSTELEKNIAQELKVEDGASIPDKLARAYILTDVQSCQAELMGSGATAVTCLIKKSMVEREDGREEQIREIYAANVGDSRAVLCREGRGVRLSYDHKADDGAEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVREEEEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGRVDVDAAGLLVQEAMRRGSSDNITCVVVF 379
            + TFR VS A+EMNP  R++MED H  +  FD D S SF  +YDGHGGR  VDF+S+ LE+ +A+E++ ++ +SI +++ RAY LTD    +A ++ SGATAVTCL+++     +DG+      I+AAN+GDSRAVL R G+  RL+YDHKA+D AEQ R+ AAGGFVLRNRVLGILAV+RSFG+  +KD V  +P+ S T V  +                +FLILACDGVWDV +D++AV  V    E+     + D AG L++E++ RGS+DNIT V+VF
Sbjct:   45 TATFRCVSCADEMNPSWRNSMEDAHETVAHFDGDPSTSFFAVYDGHGGRGTVDFVSSRLEEILAEEMRADNTSSIQERITRAYGLTDCLCKEASVLTSGATAVTCLLRE-----QDGKV----TIHAANIGDSRAVLARGGKAERLTYDHKAEDAAEQERVNAAGGFVLRNRVLGILAVSRSFGNQGMKDLVTAVPHVSETSVCPD---------------CTFLILACDGVWDVFTDNDAVSFVTQAMET---MAEADVAGALLRESLARGSTDNITVVIVF 300          
BLAST of NO26G00980 vs. NCBI_GenBank
Match: GAX96708.1 (Hypothetical protein PINS_004584 [Pythium insidiosum])

HSP 1 Score: 236.1 bits (601), Expect = 1.800e-58
Identity = 130/279 (46.59%), Postives = 174/279 (62.37%), Query Frame = 0
Query:  100 RGVSVAEEMNPLRRSTMEDVHRVLPVFDDDASMSFVGIYDGHGGRDIVDFLSTELEKNIAQELKVEDGASIPDKLARAYILTDVQSCQAELMGSGATAVTCLIKKSMVEREDGREEQIREIYAANVGDSRAVLCREGRGVRLSYDHKADDGAEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVREEEEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGRVDVDAAGLLVQEAMRRGSSDNITCVVVF 379
            R VS+ EEMNP RR TMED  RV+  F       F G+YDGHGGRD+  +L + L +N+A EL+++D  ++  K+  AY++TD++ CQA     G+TAVT L+        DG     R+++ AN+GDSRAV+C  G+ VRL+ DHKAD+  E ARI   GGFV+ +RV G+LAV RSFGD  LK +V   P+ +TT + +E                 F+ILACDGVWD LSD EAV +V  L  ++  R    AA +LV+EA+ R S DNITC+VVF
Sbjct:   15 RCVSLYEEMNPARRKTMEDTVRVVDGFLHHHENGFFGVYDGHGGRDVSVYLQSALHENVAAELEMQDDRTVEQKIESAYLITDIECCQAFAGSVGSTAVTALV------LSDGAGS--RKLHVANIGDSRAVICHRGQAVRLTKDHKADEPDEMARILEHGGFVVHHRVSGVLAVARSFGDRELKQFVSARPHITTTTLTDEY---------------PFMILACDGVWDELSDQEAVDIVQRLAPADHFR----AAEVLVKEALARESCDNITCIVVF 266          
BLAST of NO26G00980 vs. NCBI_GenBank
Match: OQR96756.1 (protein phosphatase 2C [Achlya hypogyna])

HSP 1 Score: 220.3 bits (560), Expect = 1.000e-53
Identity = 128/286 (44.76%), Postives = 171/286 (59.79%), Query Frame = 0
Query:   97 GTFRGVSVAEEMNPLRRSTMEDVHRVLPVFDDDASMSFVGIYDGHGGRDIVDFLSTELEKNIAQELKVEDGASIPDKLARAYILTDVQSC---QAELMGSGATAVTCLIKKSMVEREDGREEQIREIYAANVGDSRAVLCREGRGVRLSYDHKADDGAEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVREEEEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGRVDVDAAGLLVQEAMRRGSSDNITCVVVFL 380
            G  R +S  EEMNP +R TMED  RV+  F       +  ++DGHGGR +  FL   L K +  E   +DGAS+ + L RA+I+TD+  C    +E  GS A  VT +        ++G E   R +YAANVGDSR VLC+ GR  RLS DHKA+D  E  RI  +GGFV++NRV G+LAV+RSFGD  LK++V+  P+ S TV+ E+ +               F+ILACDGVWD L D EAV +V++L   E  +    AA  LV+ A+ +GS DNI+ VVVF+
Sbjct:    9 GCCRLLSFHEEMNPSKRKTMEDTIRVVDGFMHAPQNGYFAVFDGHGGRGVSAFLQDRLHKTLEAEAARKDGASMEELLERAFIMTDMDCCLEDSSENAGSTAALVTIV--------QEGTE---RVLYAANVGDSRVVLCKSGRASRLSQDHKAEDPDEATRIVQSGGFVIQNRVAGVLAVSRSFGDRSLKEWVIAKPFVSRTVLDEQVD---------------FVILACDGVWDELDDQEAVNIVLSLEPLERPQ----AAKYLVESALEQGSCDNISAVVVFI 264          
BLAST of NO26G00980 vs. NCBI_GenBank
Match: GAX16965.1 (protein phosphatase [Fistulifera solaris])

HSP 1 Score: 219.5 bits (558), Expect = 1.700e-53
Identity = 128/281 (45.55%), Postives = 177/281 (62.99%), Query Frame = 0
Query:  102 VSVAEEMNPLRRSTMEDV---HRVLPVFDDDASMSFVGIYDGHGGRDIVDFLSTELEKNIAQELKVEDGASIPDKLARAYILTDVQSCQAELMGSGATAVTCLIKKSMVEREDGREEQIREIYAANVGDSRAVLCREGRGVRLSYDHKADDGAEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVREEEEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGRVDVDAAGLLVQEAMRRGSSDNITCVVVFL 380
            +  AE MNP  R+TMEDV   H        DA ++F G+YDGHGGR+IV+FL   L  ++AQEL  ED + I  +L RA+++TD+ + +A ++ SGAT  TCL+K         +     EI AAN GDSR VL  EG   RL+ DH+A D +E ARIE AGGF+ R RVLGIL++TRS GDH LK +V+G P    +V+    +    KE++R     + LILACDGV+DVLSD++AV +V      E       AA  LV+EA+++GS+DN++ +V++L
Sbjct:   54 IGKAEAMNPAWRATMEDVSVIHAPGTWEAPDADLAFFGLYDGHGGREIVNFLEHGLSFHVAQELAFEDDSDIQTRLQRAFLMTDIHARRAGVLTSGATVATCLVK------SQSQTPNRVEIVAANAGDSRVVLFHEGVVTRLTEDHRASDLSEVARIEQAGGFLFRERVLGILSLTRSIGDHLLKRFVIGHP----SVMSATLDLSSNKENER-----TLLILACDGVFDVLSDEQAVAVV-----RENASKGAGAARCLVEEALKKGSTDNVSAIVIWL 314          
BLAST of NO26G00980 vs. NCBI_GenBank
Match: ETP32219.1 (hypothetical protein F442_18991 [Phytophthora parasitica P10297])

HSP 1 Score: 217.6 bits (553), Expect = 6.500e-53
Identity = 123/284 (43.31%), Postives = 168/284 (59.15%), Query Frame = 0
Query:   97 GTFRGVSVAEEMNPLRRSTMEDVHRVLPVFDDDASMSFVGIYDGHGGRDIVDFLSTELEKNIAQELK-VEDGASIPDKLARAYILTDVQSCQAELMGSGATAVTCLIKKSMVEREDGREEQIREIYAANVGDSRAVLCREGRGVRLSYDHKADDGAEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVREEEEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGRVDVDAAGLLVQEAMRRGSSDNITCVVVFL 380
            G  R VS+ EEMN   R TMED  RV+  F       +  I+DGHGGR +  +L   L +NIA EL+  +D +++  +L R + ++D++ CQ+     GAT VT ++ +         EE ++ +Y ANVGDSRAV+   G+ VRLS DHKA D  E  RI   GGFV+++RV GILAV+RSFGD  LK +VV  P+TS T +    +               F +L CDGVWDVLSD E V ++ ++  +E  R    AA +LVQEA+ RGS DN+T +VVFL
Sbjct:    5 GCCRCVSICEEMNAKHRKTMEDTVRVVDGFFQHRKNGYFAIHDGHGGRSVSTYLQRILHENIANELQHADDDSTVEQRLERGFFISDMECCQSFSGSVGATVVTAILLE---------EEDVKTLYVANVGDSRAVISCNGKAVRLSKDHKASDHVENERIIQQGGFVIQDRVSGILAVSRSFGDRDLKQFVVAKPHTSATRLTPAAD-------------YPFFVLGCDGVWDVLSDQEVVDMMGSIPVAEQSR----AAQILVQEALARGSGDNVTAIVVFL 262          
BLAST of NO26G00980 vs. NCBI_GenBank
Match: ETK74608.1 (hypothetical protein L915_18636 [Phytophthora parasitica] >ETL28030.1 hypothetical protein L916_18540 [Phytophthora parasitica] >ETL81286.1 hypothetical protein L917_18363 [Phytophthora parasitica])

HSP 1 Score: 217.2 bits (552), Expect = 8.500e-53
Identity = 123/284 (43.31%), Postives = 168/284 (59.15%), Query Frame = 0
Query:   97 GTFRGVSVAEEMNPLRRSTMEDVHRVLPVFDDDASMSFVGIYDGHGGRDIVDFLSTELEKNIAQELK-VEDGASIPDKLARAYILTDVQSCQAELMGSGATAVTCLIKKSMVEREDGREEQIREIYAANVGDSRAVLCREGRGVRLSYDHKADDGAEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVREEEEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGRVDVDAAGLLVQEAMRRGSSDNITCVVVFL 380
            G  R VS+ EEMN   R TMED  RV+  F       +  I+DGHGGR +  +L   L +NIA EL+  +D +++  +L R + ++D++ CQ+     GAT VT ++ +         EE ++ +Y ANVGDSRAV+   G+ VRLS DHKA D  E  RI   GGFV+++RV GILAV+RSFGD  LK +VV  P+TS T +    +               F +L CDGVWDVLSD E V ++ ++  +E  R    AA +LVQEA+ RGS DN+T +VVFL
Sbjct:    5 GCCRCVSICEEMNAKHRKTMEDTVRVVDGFLQHRKNGYFAIHDGHGGRSVSTYLQRILHENIANELQHADDDSTVEQRLERGFFISDMECCQSFSGSVGATVVTAILLE---------EEDVKTLYVANVGDSRAVISCNGKAVRLSKDHKASDHVENERIIQQGGFVIQDRVSGILAVSRSFGDRDLKQFVVAKPHTSATRLTPAAD-------------YPFFVLGCDGVWDVLSDQEVVDMMGSIPVAEQSR----AAQILVQEALARGSGDNVTAIVVFL 262          
BLAST of NO26G00980 vs. NCBI_GenBank
Match: ETM34492.1 (hypothetical protein L914_18453 [Phytophthora parasitica])

HSP 1 Score: 217.2 bits (552), Expect = 8.500e-53
Identity = 123/284 (43.31%), Postives = 168/284 (59.15%), Query Frame = 0
Query:   97 GTFRGVSVAEEMNPLRRSTMEDVHRVLPVFDDDASMSFVGIYDGHGGRDIVDFLSTELEKNIAQELK-VEDGASIPDKLARAYILTDVQSCQAELMGSGATAVTCLIKKSMVEREDGREEQIREIYAANVGDSRAVLCREGRGVRLSYDHKADDGAEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVREEEEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGRVDVDAAGLLVQEAMRRGSSDNITCVVVFL 380
            G  R VS+ EEMN   R TMED  RV+  F       +  I+DGHGGR +  +L   L +NIA EL+  +D +++  +L R + ++D++ CQ+     GAT VT ++ +         EE ++ +Y ANVGDSRAV+   G+ VRLS DHKA D  E  RI   GGFV+++RV GILAV+RSFGD  LK +VV  P+TS T +    +               F +L CDGVWDVLSD E V ++ ++  +E  R    AA +LVQEA+ RGS DN+T +VVFL
Sbjct:    5 GCCRCVSICEEMNAKHRKTMEDTVRVVDGFLQHRKNGYFAIHDGHGGRSVSTYLQRILHENIANELQHADDDSTVEQRLERGFFISDMECCQSFSGSVGATVVTAILLE---------EEDVKTLYVANVGDSRAVISCNGKAVRLSKDHKASDHVENERIIQQGGFVIQDRVSGILAVSRSFGDRDLKQFVVAKPHTSATRLMPAAD-------------YPFFVLGCDGVWDVLSDQEVVDMMGSIPVAEQSR----AAQILVQEALARGSGDNVTAIVVFL 262          
BLAST of NO26G00980 vs. NCBI_GenBank
Match: ETP04141.1 (hypothetical protein F441_19026 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 217.2 bits (552), Expect = 8.500e-53
Identity = 123/284 (43.31%), Postives = 168/284 (59.15%), Query Frame = 0
Query:   97 GTFRGVSVAEEMNPLRRSTMEDVHRVLPVFDDDASMSFVGIYDGHGGRDIVDFLSTELEKNIAQELK-VEDGASIPDKLARAYILTDVQSCQAELMGSGATAVTCLIKKSMVEREDGREEQIREIYAANVGDSRAVLCREGRGVRLSYDHKADDGAEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVREEEEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGRVDVDAAGLLVQEAMRRGSSDNITCVVVFL 380
            G  R VS+ EEMN   R TMED  RV+  F       +  I+DGHGGR +  +L   L +NIA EL+  +D +++  +L R + ++D++ CQ+     GAT VT ++ +         EE ++ +Y ANVGDSRAV+   G+ VRLS DHKA D  E  RI   GGFV+++RV GILAV+RSFGD  LK +VV  P+TS T +    +               F +L CDGVWDVLSD E V ++ ++  +E  R    AA +LVQEA+ RGS DN+T +VVFL
Sbjct:    5 GCCRCVSICEEMNAKHRKTMEDTVRVVDGFLQHRKNGYFAIHDGHGGRSVSTYLQRILHENIANELQHADDDSTVEQRLERGFFISDMECCQSFSGSVGATVVTAILLE---------EEDVKTLYVANVGDSRAVISCNGKAVRLSKDHKASDHVENERIIQQGGFVIQDRVSGILAVSRSFGDRDLKQFVVAKPHTSATRLTPAAD-------------YPFFVLGCDGVWDVLSDQEVVDMMGSIPVAEQSR----AAQILVQEALARGSGDNVTAIVVFL 262          
BLAST of NO26G00980 vs. NCBI_GenBank
Match: XP_002289835.1 (hypothetical protein THAPSDRAFT_262201, partial [Thalassiosira pseudonana CCMP1335] >EED93372.1 hypothetical protein THAPSDRAFT_262201, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 217.2 bits (552), Expect = 8.500e-53
Identity = 130/300 (43.33%), Postives = 177/300 (59.00%), Query Frame = 0
Query:  102 VSVAEEMNPLRRSTMEDVHRVLPV----FDDDASMSFVGIYDGHGGRDIVDFLSTELEKNIAQELKVEDGAS----IPDKLARAYILTDVQSCQAELMGSGATAVTCLIKKSMVEREDGREEQIR-EIYAANVGDSRAVL-------------CREGRGVRLSYDHKADDGAEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVREEEEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGRVDVDAAGLLVQEAMRRGSSDNITCVVVFL 380
            VS+AEEMNP RRSTMEDVH   P          S +F+G+YDGHGGR IVD+L   L +N+ +E +  + +S    I   L RA++LTD+QS  A    SGAT   C++   +    DG +  I   I+AAN GD+R VL                   +RL++DHK+ D  E +RIE++GG ++R RVLG+LAV+RS GDH LK++V+G P+ S+TVVR      +G+          FLI+ACDG+WDV+ D EAV +V    E          A +L+ EAMRRGS+DNIT +V +L
Sbjct:    7 VSIAEEMNPTRRSTMEDVHVYHPPNSWNHPTCTSATFIGVYDGHGGRSIVDYLEDHLAENVGKENETNNNSSEGQLIQKALERAFLLTDIQSRIAGHTTSGATVACCVVIPKLA--GDGSKRVIEIGIHAANAGDARIVLSSGVARSTPXXXXXXXXXAMRLTHDHKSTDPTEISRIESSGGIMIRGRVLGVLAVSRSLGDHGLKEFVIGRPFLSSTVVRSASPFTDGE----------FLIVACDGLWDVMEDQEAVDMVRKYVE--------QTAQILIDEAMRRGSADNITVIVHWL 286          
The following BLAST results are available for this feature:
BLAST of NO26G00980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23175.16.600e-12276.61protein phosphatase 2c-related protein [Nannochlor... [more]
CBJ26526.12.700e-6749.82protein phosphatase 2C-like domain-containing prot... [more]
GAX96708.11.800e-5846.59Hypothetical protein PINS_004584 [Pythium insidios... [more]
OQR96756.11.000e-5344.76protein phosphatase 2C [Achlya hypogyna][more]
GAX16965.11.700e-5345.55protein phosphatase [Fistulifera solaris][more]
ETP32219.16.500e-5343.31hypothetical protein F442_18991 [Phytophthora para... [more]
ETK74608.18.500e-5343.31hypothetical protein L915_18636 [Phytophthora para... [more]
ETM34492.18.500e-5343.31hypothetical protein L914_18453 [Phytophthora para... [more]
ETP04141.18.500e-5343.31hypothetical protein F441_19026 [Phytophthora para... [more]
XP_002289835.18.500e-5343.33hypothetical protein THAPSDRAFT_262201, partial [T... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005970NSK005970Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00980.1NO26G00980.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100043g45gene7313Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00980.1NO26G00980.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00980 ID=NO26G00980|Name=NO26G00980|organism=Nannochloropsis oceanica|type=gene|length=1140bp
ATGGTGCCTACTGTAGAAGGGGCCTATAATGACACCCAAGAGCTGCCAAC
GATGGCCGCTTGCAAACCCGACGGAAGTATGAGCAGCACTAGCGCCATCC
AGGAGAGCACCACCCCTCCCACTCCCTTTCCCCCTCCCGCCGACACCGCC
ACCCCGGCCAGTGACCCAGAGGAGGAGGAAGGCCGCTCCGGTTCTTCACA
GTTGGACCACTCCAACAGTGCGTCGTCGATTGCCACTTCGGCGTCGGCCG
CCATCCAAGCCATCAAAGGCACTCTTTACCCGGCCAGTGGGACTTTCCGG
GGGGTAAGCGTTGCGGAGGAGATGAACCCCCTGCGAAGGAGTACCATGGA
AGATGTCCACAGAGTCCTACCGGTGTTTGACGATGATGCGAGTATGAGTT
TTGTGGGTATTTACGACGGGCATGGAGGGAGAGATATCGTTGATTTCCTC
TCCACAGAGTTGGAGAAGAATATAGCCCAGGAACTCAAGGTAGAGGATGG
GGCATCCATACCCGACAAACTGGCCAGGGCGTATATATTGACCGACGTGC
AGTCATGCCAAGCAGAGCTGATGGGCTCGGGAGCCACGGCCGTGACGTGC
CTTATAAAAAAATCAATGGTGGAGCGTGAGGATGGAAGGGAAGAGCAGAT
CCGTGAGATATACGCGGCGAATGTAGGGGACAGTCGCGCGGTACTGTGTA
GGGAGGGAAGGGGGGTGAGGTTATCGTATGACCACAAGGCAGACGATGGG
GCAGAGCAGGCGCGGATTGAGGCGGCAGGAGGATTTGTCCTCCGGAATCG
TGTCTTGGGTATTTTGGCTGTAACGAGGAGTTTTGGGGACCATCGACTGA
AGGACTATGTGGTGGGCTTGCCCTACACCTCGACGACGGTTGTGCGGGAG
GAGGAAGAAGGTGTAGAAGGAAAAGAAGACAAAAGGGAGAGAGGGGGAGA
CTCTTTTTTGATCTTGGCCTGTGATGGGGTCTGGGATGTGTTGAGCGATG
ACGAGGCGGTGGGGCTGGTCATGGCGCTGTGGGAGAGCGAGGGAGGGAGG
GTGGACGTGGATGCAGCGGGGTTGTTGGTGCAGGAGGCGATGAGGAGGGG
CAGCTCGGATAACATTACATGTGTGGTGGTCTTTCTGTAA
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protein sequence of NO26G00980.1

>NO26G00980.1-protein ID=NO26G00980.1-protein|Name=NO26G00980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=380bp
MVPTVEGAYNDTQELPTMAACKPDGSMSSTSAIQESTTPPTPFPPPADTA
TPASDPEEEEGRSGSSQLDHSNSASSIATSASAAIQAIKGTLYPASGTFR
GVSVAEEMNPLRRSTMEDVHRVLPVFDDDASMSFVGIYDGHGGRDIVDFL
STELEKNIAQELKVEDGASIPDKLARAYILTDVQSCQAELMGSGATAVTC
LIKKSMVEREDGREEQIREIYAANVGDSRAVLCREGRGVRLSYDHKADDG
AEQARIEAAGGFVLRNRVLGILAVTRSFGDHRLKDYVVGLPYTSTTVVRE
EEEGVEGKEDKRERGGDSFLILACDGVWDVLSDDEAVGLVMALWESEGGR
VDVDAAGLLVQEAMRRGSSDNITCVVVFL*
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Synonyms
Publications