NO26G00960, NO26G00960 (gene) Nannochloropsis oceanica

Overview
NameNO26G00960
Unique NameNO26G00960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3703
Alignment locationchr26:314051..317753 +

Link to JBrowse

Properties
Property NameValue
DescriptionPirin, C-terminal domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:314051..317753 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011051RmlC_Cupin
IPR003829Pirin_N_dom
IPR008778Pirin_C_dom
Homology
BLAST of NO26G00960 vs. NCBI_GenBank
Match: EWM23134.1 (Pirin, C-terminal domain protein [Nannochloropsis gaditana])

HSP 1 Score: 336.3 bits (861), Expect = 1.800e-88
Identity = 169/273 (61.90%), Postives = 199/273 (72.89%), Query Frame = 0
Query:  254 QVYGNGAAQFLTAGNGVLHEEMWEFSKGRDMELFQIWINLPRRHKDIDPSLQLVGDTDNHDGKGPIPEITILSPSXXXXXXXXXXFSASP----RGAEKKVTVRVLMGEAHGLQGKLESLTPMTVLHVSMDSGSSWAFPLPSHHTCHIYARKGPLDVLVDAGGG---------RDGGKPGLVRVETHETAFMKTGGELLQVHSPLDGKGG-----SDFLVLAGEPLREPVAASGPWVFNEASEATRAYARYQTGAFGLPWEHTLDDEAWRDVC 509
            Q+YG+GAAQ LTAG GVLHEEMW+FS GRD+ELFQIWINLP R K  +PSLQLVG+TD+ D  GPIPE+T+LS S            ASP      + +KV VR+L+GEAHG++ ++E+LTP TVLHVSMD+GSSWAFP+ + HT H+Y RKGP+D+LV AG G         R+   P  VRVETHETAF   GGELLQVH P  G GG      DFLVLAGEPL EPVAASGPWVFN+A++A RAYARYQ G FGLPW   LDDEAW+ +C
Sbjct:   34 QIYGDGAAQLLTAGRGVLHEEMWDFSNGRDVELFQIWINLPGRLKGTEPSLQLVGETDSPDAAGPIPEVTLLS-SALSERSSPPLPPASPLLPAPSSTRKVVVRILVGEAHGVRARMETLTPQTVLHVSMDAGSSWAFPVAASHTLHVYVRKGPVDILVGAGEGRGENQEGASREKRSPRFVRVETHETAFTHKGGELLQVHCPPVGTGGGRGGEGDFLVLAGEPLGEPVAASGPWVFNDAADAQRAYARYQAGVFGLPWGPALDDEAWKAMC 305          
BLAST of NO26G00960 vs. NCBI_GenBank
Match: CBN79124.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 250.4 bits (638), Expect = 1.300e-62
Identity = 151/423 (35.70%), Postives = 215/423 (50.83%), Query Frame = 0
Query:   93 PPSLRQIALVSKFARLPFWPIWHGLIIMFLDQIGFRELSQSLEATIGGRVAPMIYMPKPGVGERSEVEAFDFSTAGGFTEANKKKMEQEEKEMLSANLLALTDPFLMNVHHRHSFLKLDPFRWLQALIFPEGFPAHPHAGFNTLTYVLKGQMKHRDSMGVKQVYGNGAAQFLTAGNGVLHEEMWEFS---KGRDMELFQIWINLPRRHKDIDPSLQLVGDTDNHDGKG-PIPEITILSPSXXXXXXXXXXFSASPRGAEKKVTVRVLMGEAHGLQGKLESLTPMTVLHVSMDSGSS-WAFPLPSHHTCHIYARKGPLDVLVDAGG---GRDGGKPGLVRVETHETAFMKTGGELLQVHSPLDGKGGSDFLVLAGEPLREPVAASGPWVFNEASEATRAYARYQTGAFGLPWEHTLDDEAWRDV 508
            PP  R +    +  RLP WP+ +GLI   LD +  R+L+  LE   GGRV   +  P       ++VE                                 +DPF+M VHHRH+F  LDPFR +  +  PEGFPAHPH GF T+TYV++G M HRDSMG+KQ YG  A Q+++AG G+LHEEMW+     +  DMEL+QIW+NLP   K   P +QL G     +G G P+P   +  PS                   K   V V+ GE       +E++ P+++LHV M+ G+  WA  +P  H C IY R+G L ++    G   G +  +P LV   T     ++  G+  +  +   GK   DF+++  EP RE +A  G  V N   E  +AY  +  G FG+PW++ L+D+ WR++
Sbjct:  108 PPLYRSVKTTMRPLRLPAWPVQNGLIYTALDFLRLRKLALHLEDLWGGRVG--VLQPP------NQVE---------------------------------SDPFIMLVHHRHTFWPLDPFRPISNMFVPEGFPAHPHRGFQTVTYVMRGGMVHRDSMGLKQRYGANAVQWMSAGRGILHEEMWDIKDKWEKADMELYQIWVNLPSSLKMTRPRIQLAG-----EGTGSPLP---VAKPS-------------------KGTEVIVVAGELCNETSPVETMQPLSMLHVKMEVGAEPWAHHVPWGHHCLIYVRRGDLTIVPTEEGYYEGDEDREPQLVSTAT--AVSLEDDGDYARFEN--RGKEDLDFMLIEAEPTRESIATRGSMVMNTEKECDKAYRDFSEGFFGVPWDNRLNDDEWREL 458          
BLAST of NO26G00960 vs. NCBI_GenBank
Match: XP_002291511.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91618.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 244.6 bits (623), Expect = 7.000e-61
Identity = 154/429 (35.90%), Postives = 208/429 (48.48%), Query Frame = 0
Query:   94 PSLRQIALVSKFARLPFWPIWHGLIIMFLDQIGFRELSQSLEATIGGRVAPMIYMPKPGVGERSEVEAFDFSTAGGFTEANKKKMEQEEKEMLSANLLALTDPFLMNVHHRHSFLKLDPFRWLQALIFPEGFPAHPHAGFNTLTYVLKGQMKHRDSMGVKQVYG------NGAAQFLTAGNGVLHEEMWEF---SKG---RDMELFQIWINLPRRHKDIDPSLQLVGDTDNHDGKGPIPE-ITILSPSXXXXXXXXXXFSASPRGAEKKVTVRVLMGEAHGLQGKLESLTPMTVLHVSMDS--GSSWAFPLP-SHHTCHIYARKGPLDVLVDAGGGRDGGKPGLVRVETHETAFMKTGGELLQVHSPLDGKGGSDFLVLAGEPLREPVAASGPWVFNEASEATRAYARYQTGAFGLPWEHTLDDEAWRD 507
            P+ RQIA V KFARLP WP+W G+ + FL +I  +E++  LE  IGGRV P                  +F ++G                         T PF++ VHHRHSF   DP R++Q   FPEGFPAHPH GF T+TY LKG M HRDS+G+KQ YG          Q+LTAG G+ HEEMW+    S+G      EL+QIW+NLP  +K   P+ +L+ +    D   PIPE IT +  S                  E      V+ GE +G+   ++  T  ++L +   S   S W   +P SH T  +Y +KG +             K G  RV  H T ++   GE L + +    +G +D L+L G PL EP+ + G  V N   E   AY  +Q G  G+PW   L D  WR+
Sbjct:   68 PTQRQIANVEKFARLPVWPVWQGVFLFFLSKIAGQEVAAKLEDVIGGRVCP------------------NFFSSGD------------------------TSPFVLLVHHRHSFSSWDPIRYIQRTFFPEGFPAHPHRGFVTVTYCLKGGMIHRDSLGIKQAYGAEDRHEGKHVQWLTAGAGIQHEEMWDVEPDSRGGWTSSQELYQIWLNLPAAYKMSAPNAELL-EAKIVDKSVPIPEGITPIIVSD-----------------EGNTITTVVSGEHNGIHAPVDCPTDASILRIEFTSKNQSIWKHMMPRSHKTAILYVKKGAI-------------KIGDERVPPHHTVYLTPDGEELTIEAL---EGEADVLLLTGAPLCEPIVSQGSMVMNTNQEIQEAYIDFQRGYMGVPWREKLSDYEWRE 420          
BLAST of NO26G00960 vs. NCBI_GenBank
Match: OLP97482.1 (putative ubiquitin-like-specific protease 1B [Symbiodinium microadriaticum])

HSP 1 Score: 241.5 bits (615), Expect = 5.900e-60
Identity = 142/432 (32.87%), Postives = 205/432 (47.45%), Query Frame = 0
Query:  102 VSKFARLPFWPIWHGLIIMFLD-QIGFRELSQSLEATIGGRVAPMIYMPKPGVGERSEVEAFDFSTAGGFTEANKKKMEQEEKEMLSANLLALTDPFLMNVHHRHSFLKLDPFRWLQALIFPEGFPAHPHAGFNTLTYVLKGQMKHRDSMGVKQVYG----------NGAAQFLTAGNGVLHEEMW---EFSKGRDMELFQIWINLPRRHKDIDPSLQLVGDTDNHDG---------------KGPIPEITILSPSXXXXXXXXXXFSASPRGAEKKVTVRVLMGEAHGLQGKLESLTPMTVLHVSMDSGSSWAFPLPSHHTCHIYARKGPLDVLVDAGGGRDGGKPGLVRVETHETAFMKTGGELLQVHSPLDGKGGSDFLVLAGEPLREPVAASGPWVFNEASEATRAYARYQTGAFGLPWEHTLDDEAW 505
            + K  RLP WP W G++ + LD  +G   +   LE   GGRV PMI+                                            A +DPFL+  HHRHSF   DPFR+L   + PEGFPAHPH GF T+TYVL+G + HRDS+GVK+ YG          + A Q++TAG+G+LHEEMW   E  +  D ELFQIW+NLP+  K  +P +Q++G +D  +                +GP+P +    P+                     V+VR++ GEA G++  +E+ + M +LHV++  G+ W +P P+  +C +Y RKG   +             G   +  H TA +       ++      K  ++ L+LAG PL+EPVA     + N  +E   A    + G FG  W+HT DD  W
Sbjct:  289 MEKHPRLPVWPAWFGIVYILLDLLLGKPSVGAWLEDRFGGRVCPMIFRD-----------------------------------------TAASDPFLLVAHHRHSFNAFDPFRYLFRFLLPEGFPAHPHRGFETVTYVLRGGLVHRDSLGVKKSYGAPKDSSGSGADAAVQWMTAGSGMLHEEMWRTGEALESSDQELFQIWVNLPKADKYTNPRMQMLGSSDTAESFSASKLGGMLTEVHERGPVPTV---EPAPG-------------------VSVRIVAGEADGVRSPIETFSDMAILHVTLQPGAVWTWPKPATWSCLLYMRKGEAIL-------------GDETLPVHHTATLTRAEIDEELKLAASQKEAAEVLILAGAPLQEPVAMGSNIIMNSDAELALANRDLRRGYFGPSWDHTDDDATW 644          
BLAST of NO26G00960 vs. NCBI_GenBank
Match: XP_002180878.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47530.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 238.0 bits (606), Expect = 6.500e-59
Identity = 150/429 (34.97%), Postives = 200/429 (46.62%), Query Frame = 0
Query:   98 QIALVSKFARLPFWPIWHGLIIMFLDQIGFRELSQSLEATIGGRVAPMIYMPKPGVGERSEVEAFDFSTAGGFTEANKKKMEQEEKEMLSANLLALTDPFLMNVHHRHSFLKLDPFRWLQALIFPEGFPAHPHAGFNTLTYVLKGQMKHRDSMGVKQVYG----------NGAAQFLTAGNGVLHEEM---------WEFSKGRDMELFQIWINLPRRHKDIDPSLQLVGDTDNHDGKGPIPEITILSPSXXXXXXXXXXFSASPRGAEKKVTVRVLMGEAHGLQGKLESLTPMTVLHVSMDSGSSWAFPL-PSHHTCHIYARKGPLDVLVDAGGGRDGGKPGLVRVETHETAFMKTGGELLQVHSPL-DGKGGSDFLVLAGEPLREPVAASGPWVFNEASEATRAYARYQTGAFGLPWEHTLDDEAWR 506
            +I  + K+ARLP WP W+G+ +  + ++   E +  LE TI GRV P  Y                               E EE           T PF+M VHH H+F   DP R+ Q   FPEGFPAHPH GF TLTY+L+G   HRDS G++Q YG          N  +Q+L  G G+LHEEM         W+    +  EL+Q+WINLP   K   P   ++G      G    P +  L+ +           + S R         +L G   G       +TPM++ HV M   ++W F L P++ T  +Y RKG    ++D+             +  H T +    G  L     L   +  +DFLVLAGEP+REP AA G  V NEASE  +AYA YQ G FG PW+ TLDD AW+
Sbjct:  120 KIKRIQKYARLPVWPAWNGVFLFLVGKVFGEETASKLEQTITGRVCPNFY-------------------------------EYEE-----------TTPFIMMVHHCHTFAAFDPLRFFQKTFFPEGFPAHPHRGFVTLTYILQGGFIHRDSQGIRQEYGQVDSAIARYKNKHSQWLNTGAGILHEEMFDLQQEKPFWQRPVFQRQELYQLWINLPASQKLNAPISTVLG------GDNETPVVQTLADNG----------TVSTR-------TLILAGSYDGASATTPIVTPMSIFHVVMQPDATWTFTLPPTYETLILYVRKG---CVLDSDE---------ASLPAHHTVYFDAQGAKLNEQLVLRTAEECADFLVLAGEPIREPCAAQGSMVMNEASEIQQAYADYQRGLFGAPWKETLDDAAWQ 471          
BLAST of NO26G00960 vs. NCBI_GenBank
Match: EJK65666.1 (hypothetical protein THAOC_13446, partial [Thalassiosira oceanica])

HSP 1 Score: 226.5 bits (576), Expect = 2.000e-55
Identity = 136/420 (32.38%), Postives = 196/420 (46.67%), Query Frame = 0
Query:  108 LPFWPIWHGLIIMFLDQIGFRELSQSLEATIGGRVAPMIYMPKPGVGERSEVEAFDFSTAGGFTEANKKKMEQEEKEMLSANLLALTDPFLMNVHHRHSFLKLDPFRWLQALIFPEGFPAHPHAGFNTLTYVLKGQMKHRDSMGVKQVY------GNGAAQFLTAGNGVLHEEMWE-----------FSKGRDMELFQIWINLPRRHKDIDPS---LQLVGDTDNHDGKGPIPEITILSPSXXXXXXXXXXFSASPRGAEKKVTVRVLMGEAHGLQGKLESLTPMTVLHVSMDSGSSWAFPLP-SHHTCHIYARKGPLDVLVDAGGGRDGGKPGLVRVETHETAFMKTGGELLQVHSPLDGKGGSDFLVLAGEPLREPVAASGPWVFNEASEATRAYARYQTGAFGLPWEHTLDDEAWRD 507
            LP WP+W G+I+ F  ++    ++   E  IGGRV P  +                                     +++  +   T PF++ VHHRH+F+  DP R+LQ   FPEGFP+HPH GF T+TY L G M HRDSMG+KQ Y      G    Q+L  G+G+ HEEMW+             +    EL+QIW+N+P   K   P    LQ  G  D  D K P P  T                   P   E  VT  V+ G+ +G++   +  T   +L V +  G++W   +P SH T  IY + G +++  D             R+  H TA++   G+ L V +  D    +D L+L+G P+ EPV + G  V N  SE  +AY  YQ+G  G+PW++ L DE W++
Sbjct:    1 LPVWPVWQGVILFFAGKLLGETVAAEWEDRIGGRVCPNFF---------------------------------SSSSVVTDTIYGGTSPFVLLVHHRHAFMNWDPLRFLQKSFFPEGFPSHPHRGFVTVTYCLSGGMLHRDSMGIKQAYGAEQRHGGNHVQWLNTGSGMQHEEMWDVFEPDEKDEGSLLQTSSQELYQIWLNVPSSQKMTSPKAHLLQKYGVKDESD-KLPPPYST-------------------PIITECGVTTTVVCGDHNGIRAPWDIPTDAAILRVELTKGATWEHSMPASHKTAIIYVKSGFIEIEGD-------------RIAPHHTAYLTQDGQTLTVRACDD---SADILLLSGAPILEPVYSQGSMVMNSKSEIQKAYQDYQSGYMGVPWDYKLTDEEWQE 351          
BLAST of NO26G00960 vs. NCBI_GenBank
Match: GAX24906.1 (hypothetical protein FisN_2Lh177 [Fistulifera solaris])

HSP 1 Score: 206.8 bits (525), Expect = 1.600e-49
Identity = 135/431 (31.32%), Postives = 190/431 (44.08%), Query Frame = 0
Query:   97 RQIALVSKFARLPFWPIWHGLIIMFLDQIGFRELSQSLEATIGGRVAPMIYMPKPGVGERSEVEAFDFSTAGGFTEANKKKMEQEEKEMLSANLLALTDPFLMNVHHRHSFLKLDPFRWLQALIFPEGFPAHPHAGFNTLTYVLKGQMKHRDSMGVKQVYGNGA---------------AQFLTAGNGVLHEEMWE-----FSKGRDMELFQIWINLPRRHKDIDPSLQLVGDTDNHDGKGPIPEITILSPSXXXXXXXXXXFSASPRGAEKKVTVRVLMGEAHGLQGKLESLTPMTVLHVSMDSGSSWAFPLPSHH--TCHIYARKGPLDVLVDAGGGRDGGKPGLVRVETHETAFMKTGGELLQVHSPLDGKGGSDFLVLAGEPLREPVAASGPWVFNEASEATRAYARYQTGAFGLPWEHTLDDEAWR 506
            R +A V  FARLP WP+ +G+++  + Q+     + + E  I GRV P  +                              + QE            T PF+M VHH HSF   DP R+LQA  FPEGFPAHPH GF T+TY+L G   HRDS+GV+Q+YGN                  Q+L  G+G+LHEEM++     + K    EL+Q+W+N+P   K  +P   L+G        GP+                      +P   +      VL G   G        +P+ +LHV ++ G +W +     H  T  +Y RKG            +G       +  H  A+   G +   V    D     DFL LAG+PLREP  +SG  V + + E  +AY+ YQ G  G+PW H L D+ W+
Sbjct:   58 RPVARVETFARLPVWPVVNGVVLWMIQQLFGTATAAAWEHRITGRVCPNFF------------------------------VYQE------------TSPFVMLVHHCHSFAAWDPIRYLQATFFPEGFPAHPHRGFVTVTYMLDGGFVHRDSVGVRQMYGNALQSGNHGVLTDTEHKHTQWLHTGSGMLHEEMFDNKIRSWWKPTRQELYQLWLNVPISDKMNEPMTVLLG--------GPV---------------------ETPLVQDTTSRTLVLAGNFAGTIAAAPIHSPLCILHVQIEPGGTWIYKNEEQHFETALLYVRKG------------NGLACAETPISVHSVAYFAQGIQGRIVLQNTDRHTMVDFLFLAGDPLREPCVSSGSMVMSNSLEINQAYSDYQKGMLGVPWSHKLSDDEWK 405          
BLAST of NO26G00960 vs. NCBI_GenBank
Match: GAX26402.1 (hypothetical protein FisN_2Hh177 [Fistulifera solaris])

HSP 1 Score: 202.6 bits (514), Expect = 3.000e-48
Identity = 132/431 (30.63%), Postives = 188/431 (43.62%), Query Frame = 0
Query:   97 RQIALVSKFARLPFWPIWHGLIIMFLDQIGFRELSQSLEATIGGRVAPMIYMPKPGVGERSEVEAFDFSTAGGFTEANKKKMEQEEKEMLSANLLALTDPFLMNVHHRHSFLKLDPFRWLQALIFPEGFPAHPHAGFNTLTYVLKGQMKHRDSMGVKQVYGNGA----------------AQFLTAGNGVLHEEMWE-----FSKGRDMELFQIWINLPRRHKDIDPSLQLVGDTDNHDGKGPIPEITILSPSXXXXXXXXXXFSASPRGAEKKVTVRVLMGEAHGLQGKLESLTPMTVLHVSMDSGSSWAF-PLPSHHTCHIYARKGPLDVLVDAGGGRDGGKPGLVRVETHETAFMKTGGELLQVHSPLDGKGGSDFLVLAGEPLREPVAASGPWVFNEASEATRAYARYQTGAFGLPWEHTLDDEAWR 506
            R +A V  FARLP WP+ +G+++  + Q+     + + E  I GRV P  +                      + E                     T PF+M VHH HSF   DP R LQA  FPEGF AH HAGF T+TY+L G   HRDS+GV+Q YGN                   Q+L  G+G+LHEEM++     + K    EL+Q+W+N+P   K  +P   L+G ++                              +P   +      VL G   G        +P+ +LHV ++ G +W +   P   T  +Y RKG            +G       +  H  A+++ G +   V    D     DFL LAG+PLREP  +SG  V + + E  +AY+ YQ G FG+PW H L D+ W+
Sbjct:   61 RPVARVETFARLPVWPVVNGVVLWMIQQLFGAATAAAWEDWITGRVCPNFF---------------------AYPE---------------------TSPFVMLVHHCHSFAAWDPIRCLQATFFPEGFSAHLHAGFVTVTYILDGGFVHRDSVGVRQTYGNALHSENHGVLTGNTEHKHTQWLHTGSGILHEEMFDNTIRSWWKPTRQELYQLWLNVPISEKMNEPMTVLLGGSEE-----------------------------TPLIQDATSRTLVLAGNFAGTTAAAPIHSPLCILHVQIEPGGTWIYNEEPHFETALLYVRKG------------NGLACAETPIPVHSVAYIEPGIQGPIVLQNTDRDTVVDFLFLAGDPLREPCVSSGSMVLSNSLEINQAYSDYQRGMFGMPWSHKLSDDEWK 408          
BLAST of NO26G00960 vs. NCBI_GenBank
Match: XP_005768628.1 (hypothetical protein EMIHUDRAFT_119076 [Emiliania huxleyi CCMP1516] >EOD16199.1 hypothetical protein EMIHUDRAFT_119076 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 189.1 bits (479), Expect = 3.500e-44
Identity = 137/411 (33.33%), Postives = 178/411 (43.31%), Query Frame = 0
Query:  127 FRELSQSLEATIGGRVAPMIYMPKPGVGERSEVEAFDFSTAGGFTEANKKKMEQEEKEMLSANLLALTDPFLMNVHHRHSFLKLDPFRWL-QALIFPEGFPAHPHAGFNTLTYVLKGQ--MKHRDSMGVKQVYGNGAAQFLTAGNGVLHEEMWEFSKGRDMELFQIWINLPRRHKDIDPSLQLVGDTDNHDGKGPIPEITILSPSXXXXXXXXXXFSASPRGAEKKVTVRVLMGE----------------AHGLQ---------GKLESLTPMTVLHVSMDSGSSWAFPLPSHHTCHIYARKGPLDVLVDAGGGRDGGKPGLVRVETHETA-FMKTGGELLQVHSPLDGKGGSDFLVLAGEPLREPVAASGPWVFNEASEATRAYARYQTGAFGLPWEHTLDDEAWRDVC 509
            FR  +  LE   GGRVAP+ + P+                                            DPF++ VHHRH+F  LD  R L  A I PEGFPAHPH GF T+TYVL G+  + HRDS G +  YG+GA Q++TAG G+LHEEMW+     D EL+Q+W+NLP R K +                            XXX          +   AE++                         + G+Q         G  E+ +PM + HV + +G  +   LP   TC +Y R+G + V     GG + G         HET    + GG+ L +     G   +D LVLAGEPL  PV ASG       +E  RA   Y+ G FGLPWEHTL DE W   C
Sbjct:  170 FRSWADRLEDAFGGRVAPIQFDPRE------------------------------------------ADPFILLVHHRHAFRPLDFLRPLFSAAIMPEGFPAHPHRGFETVTYVLPGRAGLVHRDSEGCRMRYGDGAVQWMTAGRGMLHEEMWDTGASVDAELYQLWVNLPPRSKLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGAVRVRGIARPPAEEEAAXXXXXXXXXXXXXXXXXXXXXXISRGMQAAGCRRAGAGGAETYSPMRIEHVEIGAGGVYEQSLPEGWTCIVYVRRGTVAV-----GGEEVG--------MHETCQLARRGGDGLSL--ACVGGRAADVLVLAGEPLGAPVVASG-----TMAEVDRAVIDYRRGEFGLPWEHTLSDEEWARRC 518          
BLAST of NO26G00960 vs. NCBI_GenBank
Match: EJK43809.1 (hypothetical protein THAOC_37710 [Thalassiosira oceanica])

HSP 1 Score: 170.2 bits (430), Expect = 1.700e-38
Identity = 116/424 (27.36%), Postives = 181/424 (42.69%), Query Frame = 0
Query:   97 RQIALVSKFARLPFWPIWHGLIIMFLDQIGFRELSQSLEATIGGRVAPMIYMPKPGVGERSEVEAFDFSTAGGFTEANKKKMEQEEKEMLSANLLALTDPFLMNVHHRHSFLKLDPFRWLQALIFPEGFPAHPHAGFNTLTYVLKGQMKHRDSMGVKQVYGNGA-------------AQFLTAGNGVLHEEMWEFSK-----GR-------DMELFQIWINLPRRHKDIDPSLQLVGDTDNHDGKGPIPEITILSPSXXXXXXXXXXFSASPRGAEKKVTVRVLMGEAHGLQGKLESLTPMTVLHVSMDSGSSWAF-PLPSHHTCHIYARKGPLDVLVDAGGGRDGGKPGLVRVETHETAFMKTGGELLQVHSPLDGKGGSDFLVLAGEPLREPVAASGPWVFNEASEATRAYARYQTGAFGLP 495
            R +  V KF R+P WP  +G+    + Q    +L+  LE   GG   P +++ K    +                                      T PFLM  HH HSF   DP R ++  I PEGFPAH H G  T+T  L+G + HRDS G KQ++G                 Q+LT G G++HE MW+ S+     GR         E++QIW++LP   +  +P ++L+GD +                              SP   E      ++ G+  G +  +++++ +++L   +     W + P  SH T  IY R G +             K G   V+ H TA++  GGE + +H+    + G++ LVL+G+PL +   A G  V +   +  RA+A Y+ G  G+P
Sbjct:  126 RTVRKVDKFERIPTWPASNGIRWKAISQFN-PDLAAKLEHQYGGADCPNLWLDKATSPQ--------------------------------------TSPFLMMCHHNHSFRLNDPVRLMEKQIMPEGFPAHGHRGMTTVTICLRGGLVHRDSEGNKQLFGADEPSRSAKKPYKGMHTQWLTFGKGIIHELMWDNSRREGQFGRRDNGNVVHQEIYQIWVDLPSDERLTEPRIELLGDDE------------------------------SPTVVENGCKTTIIAGDYSGSKASVDTVSDLSILTAQIGQRKVWQYAPPTSHSTVIIYVRLGSI-------------KIGQTEVDAHCTAYLSQGGESVSIHA----EKGAEILVLSGQPLDQRSVAKGCMVTDSHEDLERAFADYEQGHLGVP 463          
The following BLAST results are available for this feature:
BLAST of NO26G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23134.11.800e-8861.90Pirin, C-terminal domain protein [Nannochloropsis ... [more]
CBN79124.11.300e-6235.70conserved unknown protein [Ectocarpus siliculosus][more]
XP_002291511.17.000e-6135.90predicted protein [Thalassiosira pseudonana CCMP13... [more]
OLP97482.15.900e-6032.87putative ubiquitin-like-specific protease 1B [Symb... [more]
XP_002180878.16.500e-5934.97predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK65666.12.000e-5532.38hypothetical protein THAOC_13446, partial [Thalass... [more]
GAX24906.11.600e-4931.32hypothetical protein FisN_2Lh177 [Fistulifera sola... [more]
GAX26402.13.000e-4830.63hypothetical protein FisN_2Hh177 [Fistulifera sola... [more]
XP_005768628.13.500e-4433.33hypothetical protein EMIHUDRAFT_119076 [Emiliania ... [more]
EJK43809.11.700e-3827.36hypothetical protein THAOC_37710 [Thalassiosira oc... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005973NSK005973Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00960.1NO26G00960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|559140gene_7919Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100523g1gene7315Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00960.1NO26G00960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00960 ID=NO26G00960|Name=NO26G00960|organism=Nannochloropsis oceanica|type=gene|length=3703bp
CCTCTCTTCTTCACCCCCCCCTTCCCTCCCTTCCATCCCCGGCGCCCAGG
GTGCCGGCCTCTCAAAAACGTCCTCCCATTCAAAACCCCTGAAAAAAGCA
TGCCTCTTAATCTCCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCACTAGT
CCCCAGCCTCTCCTCGGGGCACCGGACCAGCATTCCCTCAATCACACTCC
TGGCTGAGGACGAGGGGGGCAATGAAGGTGGGAAGGAGAGGGGGAAAGAG
CCATTGCAGTGCTGCATTATCAGGTCGAAGGTTAAATACTCAGAGGGAGC
GAGGAACGGAGGGACGCCAGTGAGTAGGTGGAAGAGGAGGCAGCCCACAG
CCCAAAAGTCTACCGCAGGAGTGGCAGGCTCACCAATCAAGACTTCCGGA
GAGACGTACTCAGCTGTACCCACGAAGGAACGCCGGGGCTCTTCCCTCCC
TCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CAACTTGCGCCTCGGTCTTGTCCACATCGACTACTGTAAGGGCGTCATTG
CTCTTCTTGGCTGCTCTTACAAGCTTGGCACCCATGACGCCATTCCTCTC
ACTGCCCTTCTCTCCCTTCCTCCCCTTACCTTTCTCTCCCCCTCCCTCCT
TCCCTTCTTCCCCCAGCACCAAGACTGAGCCAAAATCCGCCAGCTTTACA
TGACCGTCCTGTCCTACAAGGATATTCTCGGGCTTTACGTCTCTGTGCAC
TATTCTCTGTGAGTGCAGGTATCCCAAGGCCAGGATAACCTCCCCTACGT
AGAAACGGGCGAGCTGCACGGGGCAACAAGAGTGCAGGGAAGAATGAGAG
GCTGGAAGTTCCCCTCTTTTTTCTCCTCCTCCTCCTCCCCCTCCTCCTCC
TCCTCCCTCCTTGAAATACCTTATCACACGCATCAAATCCCCACCTACAT
GATAGTCAAGGACCAGGTACAAATTATCCGCATCCTGAAACGTAAACCAC
AATTTCACAATGCCCGGGTGCGAGAGACGGGCCAAGACGGTTTTCTCGGC
CAGGACTTGCCGCACCTTGTTCTCCCGGTGGATATGGCGTTTTTCCATCA
CTTTGATGGCGAAGTCTTTTCCTTCAGCGTAATGATTTGGCAATTGCTGC
TGTGACTGCGAGGACTGCTGCTGCTGTGACGGCTGCTGACCGCTGCCGTT
GCTGCCGCCGCTGCTACTGCTCCTGTTTCTGCCTTCGTTGGTCGTGACTA
GAGTAACAGGCCGAGGCTTAAGTCTGGCGTGGACTACCCGTGCATAGGCT
CCTTCTCCCAGGGTGCGGCCCCACCAAAAAGCGGCCTGGCTGAACCGCGA
TGGTGGCGGCGGCGGCGACGACCGTGGCTCCTCTTGCTGCTGTGACCGTG
GTGGCTGCGGTGGCTGCGGCAGCGAAGATTGTGATGGAGGGTCGTGTGAA
GATTGTGATGATGGATTGAAAGCAGCAGGAGTGGGCGAAGGAGGAGGAGG
AGGGGAAGGGCATGAAGCTGCTGCAGTGGTGGGGTCGCCTTGGCGGGCCA
TGTGATGATGACGATGACGCAAGGGAAGCAGCGCACCGGCTTAATTTACA
GGGACAGCCTGTAGGGGGAACTGAGGGCACTACGGGTTTCTCTTTCTGCT
TACACCTCTGCTGTGGGTGGTGGAGTAGTGAAGTGGGCATGATCATACCG
TGCGAATGGTCAATGGAAATAAAGAAGGACGAATATGAGTCAACCTCCTC
CTACCTCTTCTCCCTGTCATGCTCTGGCACTTGCCTCCGTTGGTCTCTGA
CAACAAACCCTCCTCTCCAACCACCAGGACAGGGACCTGAAAAGTACAAC
ACCCTTGAGGCACATGGCTGCTTTTGTCCTCACGTCCTGCTGCTGCCTCC
CATTTCTTTTATGCGCAAGTCAGGCCTTCCTCCTCTCACACTACCACAAC
ACGCCGGTTGCCCTGCCCCCAGTACCAGCATCAGTAGCTTTGAAGCTTCT
GGTGGGTACTGCGCGCACGACGGCTGGTGCTCGATCTGTCCTCTCTCCTA
ATAAATTTACAACCAGACATTGGTCCTCCTCCTCGTCCTCCTCTTCCACC
AGCACCAGCACCTCTCCTTCCTCCTCCTTCGATGACAAACCACCTTCCCT
CCGTCAAATCGCCCTCGTCAGTAAATTCGCCCGTTTGCCATTTTGGCCTA
TTTGGCATGGGCTTATCATCATGTTCCTCGATCAAATCGGCTTTCGGGAG
TTGAGTCAATCGCTAGAAGCGACCATTGGAGGCCGGGTGGCACCTATGAT
TTACATGCCTAAACCCGGCGTGGGTGAGCGCAGTGAGGTCGAAGCGTTTG
ATTTTTCCACTGCCGGTGGTTTTACCGAGGCGAATAAAAAGAAGATGGAA
CAGGAAGAGAAGGAGATGCTGTCCGCGAACCTACTGGCATTGACGGATCC
ATTTTTGATGAATGTCCATCATCGTCATTCGTTCCTTAAATTGGACCCGT
TCCGGTGGCTGCAAGCGCTCATTTTCCCGGAAGGCTTTCCCGCGCACCCT
CATGCGGGATTTAATACCCTTACGTATGTACTGAAGGGACAGATGAAGCA
CCGAGATTCCATGGGCGTTAAGCAGgtagggatggtcgtccccccccccc
cccccttcttttcttcccctttttcgatgcttgtattcgagtaatcccac
ctatcccactccgatttttacctttatccctcctcttaagGTATATGGCA
ACGGCGCCGCCCAGTTCCTCACAGCAGGCAACGGCGTGTTGCACGAGGAA
ATGTGGGAGTTTTCCAAAGgtacgtgctcctgcaattactgctactacaa
ccagaggtactacccctcccttttgaaagaagaaaaatcggctcatcccc
ccaccctcccttctcttccttactttccctcccccccctccccccatcaa
gGCCGAGACATGGAGCTCTTCCAAATTTGGATCAACCTCCCCCGCCGGCA
CAAGGACATCGACCCCTCCCTCCAACTCGTCGGCGACACAGACAACCACG
ACGGTAAAGGCCCCATCCCAGAAATAACCATCCTCTCCCCGTCCTCCTCG
TCCTCCACGTCATCCTCGTCCGTCTTCTCCGCCTCTCCTCGAGGCGCGGA
AAAAAAAGTCACGGTCCGGGTGCTCATGGGAGAGGCTCACGGTCTACAAG
GAAAACTTGAATCTCTCACCCCAATGACCGTCCTTCACGTCAGCATGGAC
TCGGGCAGCTCGTGGGCCTTTCCCCTCCCATCTCATCACACCTGTCACAT
ATACGCACGGAAAGGGCCATTAGATGTGTTGGTTGATGCCGGGGGAGGGA
GGGACGGGGGAAAGCCGGGGCTTGTGAGAGTAGAGACGCATGAGACTGCC
TTCATGAAGACGGGAGGGGAGTTACTGCAGGTGCATAGCCCTCTTGATGG
GAAGGGAGGGAGCGATTTCTTAGTGCTGGCAGGAGAACCATTGCGTGAAC
CAGTAGCGGCGAGTGGACCATGGGTTTTCAATGAGGCGAGTGAGGCGACT
CGTGCATATGCCCGATATCAGACGGGCGCGTTTGGCTTGCCGTGGGAGCA
TACATTGGATGATGAGGCCTGGCGGGATGTGTGTAGAGTGGGGAGGAGAG
GAGGAGGAGGAGAAGGAGGAGGAGGAGGGGGCGGTATTACAAGAGATCTG
TAG
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protein sequence of NO26G00960.1

>NO26G00960.1-protein ID=NO26G00960.1-protein|Name=NO26G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=531bp
MAAFVLTSCCCLPFLLCASQAFLLSHYHNTPVALPPVPASVALKLLVGTA
RTTAGARSVLSPNKFTTRHWSSSSSSSSTSTSTSPSSSFDDKPPSLRQIA
LVSKFARLPFWPIWHGLIIMFLDQIGFRELSQSLEATIGGRVAPMIYMPK
PGVGERSEVEAFDFSTAGGFTEANKKKMEQEEKEMLSANLLALTDPFLMN
VHHRHSFLKLDPFRWLQALIFPEGFPAHPHAGFNTLTYVLKGQMKHRDSM
GVKQVYGNGAAQFLTAGNGVLHEEMWEFSKGRDMELFQIWINLPRRHKDI
DPSLQLVGDTDNHDGKGPIPEITILSPSSSSSTSSSSVFSASPRGAEKKV
TVRVLMGEAHGLQGKLESLTPMTVLHVSMDSGSSWAFPLPSHHTCHIYAR
KGPLDVLVDAGGGRDGGKPGLVRVETHETAFMKTGGELLQVHSPLDGKGG
SDFLVLAGEPLREPVAASGPWVFNEASEATRAYARYQTGAFGLPWEHTLD
DEAWRDVCRVGRRGGGGEGGGGGGGITRDL*
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Synonyms
Publications