NO26G00930, NO26G00930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00930 vs. NCBI_GenBank
Match: XP_005852611.1 (small subunit ribosomal protein S9e [Nannochloropsis gaditana CCMP526] >EKU23223.1 small subunit ribosomal protein S9e [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 332.0 bits (850), Expect = 1.500e-87 Identity = 168/175 (96.00%), Postives = 172/175 (98.29%), Query Frame = 0 Query: 34 MPSIAFRRNYRKTANTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKVRKAARELLTLDDKDPRRVFEAPALLRRCVRAGLLEQDKAELDYVLQLTTQKLLERRLQTKVYKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 209 MPSIAFRRNYRKT TPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAK+RKAARELLTLD+KDPRRVFE PALLRRCVRAGLLEQDKAELD+VLQLTTQKLLERRLQTKV+KQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA Sbjct: 1 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 175
BLAST of NO26G00930 vs. NCBI_GenBank
Match: EWM23131.1 (40s ribosomal protein s9 [Nannochloropsis gaditana]) HSP 1 Score: 332.0 bits (850), Expect = 1.500e-87 Identity = 168/176 (95.45%), Postives = 173/176 (98.30%), Query Frame = 0 Query: 33 TMPSIAFRRNYRKTANTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKVRKAARELLTLDDKDPRRVFEAPALLRRCVRAGLLEQDKAELDYVLQLTTQKLLERRLQTKVYKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 209 +MPSIAFRRNYRKT TPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAK+RKAARELLTLD+KDPRRVFE PALLRRCVRAGLLEQDKAELD+VLQLTTQKLLERRLQTKV+KQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA Sbjct: 54 SMPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 229
BLAST of NO26G00930 vs. NCBI_GenBank
Match: CBN76630.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 283.9 bits (725), Expect = 4.600e-73 Identity = 139/175 (79.43%), Postives = 155/175 (88.57%), Query Frame = 0 Query: 34 MPSIAFRRNYRKTANTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKVRKAARELLTLDDKDPRRVFEAPALLRRCVRAGLLEQDKAELDYVLQLTTQKLLERRLQTKVYKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 209 MP + RNYRKT TPRRP+EKERLD ELKLCGEYGLRCK EIWRVQFALAK+RKAAR+LLTLD KDP+R+FE PALLRR R GLL +D+ ELD+VLQLTT+K+LERRLQTKV+KQ LAKSIHHARVLI+ RHIRVGKQLVN+P F+VR+DSEKHIDFS TSPYGQGR GRVA Sbjct: 1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDEKELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVA 175
BLAST of NO26G00930 vs. NCBI_GenBank
Match: XP_009038600.1 (hypothetical protein AURANDRAFT_28757 [Aureococcus anophagefferens] >EGB06855.1 hypothetical protein AURANDRAFT_28757 [Aureococcus anophagefferens]) HSP 1 Score: 273.9 bits (699), Expect = 4.700e-70 Identity = 137/175 (78.29%), Postives = 154/175 (88.00%), Query Frame = 0 Query: 34 MPSIAFRRNYRKTANTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKVRKAARELLTLDDKDPRRVFEAPALLRRCVRAGLLEQDKAELDYVLQLTTQKLLERRLQTKVYKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 209 MP +F RNYRKT+ TPRRPFEKER+D ELKL GEYGLRCK E+WR Q ALAK+RKAAR LLTLD KDP R+FEAPALLRR R GLL++ + ELD VLQ+TTQ+LLERRLQTKV+KQ LAKSIHHARVLI+QRHIRVGKQ+VN+PSFLVR+DSEKHIDF+ TSPYGQGR GRVA Sbjct: 1 MPKTSFLRNYRKTSKTPRRPFEKERIDGELKLVGEYGLRCKRELWRTQLALAKLRKAARTLLTLDTKDPARMFEAPALLRRLQRYGLLDETELELDAVLQMTTQRLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQVVNVPSFLVRLDSEKHIDFAITSPYGQGRPGRVA 175
BLAST of NO26G00930 vs. NCBI_GenBank
Match: GAY00900.1 (30S ribosomal protein S4 [Pythium insidiosum]) HSP 1 Score: 271.6 bits (693), Expect = 2.300e-69 Identity = 136/175 (77.71%), Postives = 153/175 (87.43%), Query Frame = 0 Query: 34 MPSIAFRRNYRKTANTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKVRKAARELLTLDDKDPRRVFEAPALLRRCVRAGLLEQDKAELDYVLQLTTQKLLERRLQTKVYKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 209 MP ++ RNYRKT TP RPF KERLD ELKL GEYGLRCK EIWRVQF L+K+RKAARELLTLD+KDP+R+FE ALLRR R GLL ++++ELDYVL+L QKLLERRLQTKV+KQ LAKS+HHARVLIRQRHIRVGKQLVNIPSF+VR+DSEKHIDF+ TSPYGQGR GRVA Sbjct: 1 MPKVSRHRNYRKTYRTPARPFGKERLDGELKLLGEYGLRCKREIWRVQFMLSKLRKAARELLTLDEKDPKRLFEGNALLRRLQRYGLLSEEESELDYVLRLNVQKLLERRLQTKVFKQGLAKSVHHARVLIRQRHIRVGKQLVNIPSFMVRLDSEKHIDFAVTSPYGQGRPGRVA 175
BLAST of NO26G00930 vs. NCBI_GenBank
Match: XP_009531030.1 (hypothetical protein PHYSODRAFT_354997 [Phytophthora sojae] >EGZ13601.1 hypothetical protein PHYSODRAFT_354997 [Phytophthora sojae]) HSP 1 Score: 271.2 bits (692), Expect = 3.100e-69 Identity = 136/175 (77.71%), Postives = 154/175 (88.00%), Query Frame = 0 Query: 34 MPSIAFRRNYRKTANTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKVRKAARELLTLDDKDPRRVFEAPALLRRCVRAGLLEQDKAELDYVLQLTTQKLLERRLQTKVYKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 209 MP I+ RNYRKT TP R FEKERLDQELKL GEYGLRCK EIWRVQ+AL+K+RKAARELLTLD KDP+R+FE ALLRR R G+L +D+ ELD+VL+L QKLLERRLQTKV+KQ+LAKSIHHARVLI+QRHIRVGKQLV++PSFLVR+DSEKHIDF+ TSPYGQGR GRVA Sbjct: 1 MPKISRHRNYRKTYRTPSRAFEKERLDQELKLLGEYGLRCKREIWRVQYALSKLRKAARELLTLDPKDPKRIFEGSALLRRLKRYGMLSEDENELDFVLRLNVQKLLERRLQTKVFKQNLAKSIHHARVLIKQRHIRVGKQLVDVPSFLVRMDSEKHIDFAVTSPYGQGRPGRVA 175
BLAST of NO26G00930 vs. NCBI_GenBank
Match: OWY92947.1 (40S ribosomal protein S9-1 [Phytophthora megakarya]) HSP 1 Score: 271.2 bits (692), Expect = 3.100e-69 Identity = 137/175 (78.29%), Postives = 154/175 (88.00%), Query Frame = 0 Query: 34 MPSIAFRRNYRKTANTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKVRKAARELLTLDDKDPRRVFEAPALLRRCVRAGLLEQDKAELDYVLQLTTQKLLERRLQTKVYKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 209 MP I+ RNYRKT TP R FEKERLDQELKL GEYGLRCK EIWRVQFAL+K+RKAARELLTLD KDP+R+FE ALLRR R G+L +D+ ELD+VL+L QKLLERRLQTKV+KQ+LAKSIHHARVLI+QRHIRVGKQLV++PSFLVR+DSEKHIDF+ TSPYGQGR GRVA Sbjct: 1 MPKISRHRNYRKTYRTPSRAFEKERLDQELKLLGEYGLRCKREIWRVQFALSKLRKAARELLTLDPKDPKRLFEGSALLRRLKRYGMLAEDENELDFVLRLNVQKLLERRLQTKVFKQNLAKSIHHARVLIKQRHIRVGKQLVDVPSFLVRMDSEKHIDFAVTSPYGQGRPGRVA 175
BLAST of NO26G00930 vs. NCBI_GenBank
Match: XP_008876439.1 (ribosomal protein S4 [Aphanomyces invadans] >ETV94848.1 ribosomal protein S4 [Aphanomyces invadans]) HSP 1 Score: 270.8 bits (691), Expect = 4.000e-69 Identity = 134/175 (76.57%), Postives = 153/175 (87.43%), Query Frame = 0 Query: 34 MPSIAFRRNYRKTANTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKVRKAARELLTLDDKDPRRVFEAPALLRRCVRAGLLEQDKAELDYVLQLTTQKLLERRLQTKVYKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 209 MP I+ RNYRKT TP R FEKERLDQE+KL GEYGLRCK EIWRVQ+ LAK+RKAAR+LLTLD KDP+R+FE PAL+RR R GLL +D+ ELD+VLQ+ TQKLLERRLQTKV+KQ LAKSIHHAR LI+QRHIRVG+QLV++PSF+VR+DSEKHIDFS TSPYGQGR GRVA Sbjct: 1 MPKISRHRNYRKTYRTPSRAFEKERLDQEMKLLGEYGLRCKREIWRVQYTLAKLRKAARQLLTLDPKDPKRLFEGPALMRRLKRYGLLAEDENELDFVLQMNTQKLLERRLQTKVFKQGLAKSIHHARTLIKQRHIRVGRQLVDVPSFMVRLDSEKHIDFSVTSPYGQGRPGRVA 175
BLAST of NO26G00930 vs. NCBI_GenBank
Match: XP_009846369.1 (ribosomal protein S4 [Aphanomyces astaci] >ETV64145.1 ribosomal protein S4 [Aphanomyces astaci]) HSP 1 Score: 270.0 bits (689), Expect = 6.800e-69 Identity = 134/175 (76.57%), Postives = 152/175 (86.86%), Query Frame = 0 Query: 34 MPSIAFRRNYRKTANTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKVRKAARELLTLDDKDPRRVFEAPALLRRCVRAGLLEQDKAELDYVLQLTTQKLLERRLQTKVYKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 209 MP I+ RNYRKT TP R FEKERLDQE+KL GEYGLRCK EIWRVQ+ LAK+RKAAR+LLTLD KDP+R+FE PAL+RR R GLL D+ ELD+VLQ+ TQKLLERRLQTKV+KQ LAKSIHHAR LI+QRHIRVG+QLV++PSF+VR+DSEKHIDFS TSPYGQGR GRVA Sbjct: 1 MPKISRHRNYRKTYRTPSRAFEKERLDQEMKLLGEYGLRCKREIWRVQYTLAKLRKAARQLLTLDPKDPKRLFEGPALIRRLKRYGLLADDENELDFVLQMNTQKLLERRLQTKVFKQGLAKSIHHARTLIKQRHIRVGRQLVDVPSFMVRLDSEKHIDFSVTSPYGQGRPGRVA 175
BLAST of NO26G00930 vs. NCBI_GenBank
Match: XP_002903192.1 (40S ribosomal protein S9-1 [Phytophthora infestans T30-4] >XP_008911307.1 ribosomal protein S4 [Phytophthora parasitica INRA-310] >EEY55616.1 40S ribosomal protein S9-1 [Phytophthora infestans T30-4] >ETI37949.1 ribosomal protein S4 [Phytophthora parasitica P1569] >ETK78146.1 ribosomal protein S4 [Phytophthora parasitica] >ETL31582.1 ribosomal protein S4 [Phytophthora parasitica] >ETL84827.1 ribosomal protein S4 [Phytophthora parasitica] >ETM37979.1 ribosomal protein S4 [Phytophthora parasitica] >ETN03534.1 ribosomal protein S4 [Phytophthora parasitica INRA-310] >ETO66726.1 ribosomal protein S4 [Phytophthora parasitica P1976] >ETP07838.1 ribosomal protein S4 [Phytophthora parasitica CJ01A1] >ETP35871.1 ribosomal protein S4 [Phytophthora parasitica P10297] >KUG01772.1 40S ribosomal protein S9-1 [Phytophthora nicotianae]) HSP 1 Score: 270.0 bits (689), Expect = 6.800e-69 Identity = 136/175 (77.71%), Postives = 154/175 (88.00%), Query Frame = 0 Query: 34 MPSIAFRRNYRKTANTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKVRKAARELLTLDDKDPRRVFEAPALLRRCVRAGLLEQDKAELDYVLQLTTQKLLERRLQTKVYKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPYGQGRKGRVA 209 MP I+ RNYRKT TP R FEKERLDQELKL GEYGLRCK EIWRVQ+AL+K+RKAARELLTLD KDP+R+FE ALLRR R G+L +D+ ELD+VL+L QKLLERRLQTKV+KQ+LAKSIHHARVLI+QRHIRVGKQLV++PSFLVR+DSEKHIDF+ TSPYGQGR GRVA Sbjct: 1 MPKISRHRNYRKTYRTPSRAFEKERLDQELKLLGEYGLRCKREIWRVQYALSKLRKAARELLTLDPKDPKRLFEGSALLRRLKRYGMLAEDENELDFVLRLNVQKLLERRLQTKVFKQNLAKSIHHARVLIKQRHIRVGKQLVDVPSFLVRMDSEKHIDFAVTSPYGQGRPGRVA 175 The following BLAST results are available for this feature:
BLAST of NO26G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00930 ID=NO26G00930|Name=NO26G00930|organism=Nannochloropsis oceanica|type=gene|length=1466bpback to top protein sequence of NO26G00930.1 >NO26G00930.1-protein ID=NO26G00930.1-protein|Name=NO26G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bpback to top Synonyms
Publications
|