NO26G00800, NO26G00800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00800 vs. NCBI_GenBank
Match: EWM23121.1 (fyve and coiled-coil domain-containing protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 353.6 bits (906), Expect = 1.000e-93 Identity = 183/286 (63.99%), Postives = 199/286 (69.58%), Query Frame = 0 Query: 149 AEQRGFLSYEEHEYHRHLNELDTALSAAVPQAGQPYHTHDLSWKSSGTPVRYLFKLPVPVDTAGTHVTYRFASDEFDISFAVFFLGVEEDAKMEIVLPAARVNSHQEPVSGDITVHRPGTVILLWDNTYSWFATKALSYSVHLRYPTGPTAERERGSRARAIVAAAEKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVHSRRTHLLPLLLRALPASVLLHLASFFSSNDQIQTTNKLFLQLFIQSRPGYQRPPSLSVS 435 A+QRGFLSYEEHEY +HL ELD AL+AAVPQAG P HTHDL+WKSSGTPVRY FKLPVPVDTAG+HV YRFASDEFDI FAVFF G EE AK+E VLP++RV+SH EPVSGDITVHRPGTV+LLWDN+YSWFATKALSYSVHLRYPTGP AE ERG RAR +VAAA D C SR HLLPLLLRALPA VLLHL +F +DQ+ NK+FLQLFIQSRPGY RPPSLSVS Sbjct: 299 AKQRGFLSYEEHEYRKHLAELDAALTAAVPQAGLPCHTHDLAWKSSGTPVRYFFKLPVPVDTAGSHVAYRFASDEFDIGFAVFFQGAEEGAKLETVLPSSRVDSHVEPVSGDITVHRPGTVVLLWDNSYSWFATKALSYSVHLRYPTGPAAEMERGMRARQVVAAAYHDMELAAGKHRVVQAEKEALTGEVTRLEEELARLHARLSEKRHELATLHEDALLLQECRTSRHQHLLPLLLRALPARVLLHLTGYFRRSDQVHALNKVFLQLFIQSRPGYLRPPSLSVS 584
BLAST of NO26G00800 vs. NCBI_GenBank
Match: CBN78640.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 95.1 bits (235), Expect = 6.400e-16 Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 189 LSWKSSGTPVRYLFKLPVPVDTAGTHVTYRFASDEFDISFAVFFL---------------GVEEDAKMEIVLPAARVNSHQEPVSGDITVHRPGTVILLWDNTYSWFATKALSYSVHLRYPTGPTAERERGSRA 308 ++WKSS TP+ F+LP+PV+ +G+ + Y F + D+ FA+ F G+ ED + E+++ +V S P++G I + RPG + L+WDN +SWF K LSYSV L P+ E+ + RA Sbjct: 29 ITWKSSTTPIATEFRLPIPVEHSGSVIDYSFETLHNDVQFAILFEEADDSKGGGAFSGDGGIAEDGQEEVIVEPQKVESQLGPITGTIPLTRPGRLTLVWDNGHSWFKHKILSYSVTLHVPSLLATEKAKCGRA 162
BLAST of NO26G00800 vs. NCBI_GenBank
Match: XP_008865788.1 (hypothetical protein H310_03628 [Aphanomyces invadans] >ETW06011.1 hypothetical protein H310_03628 [Aphanomyces invadans]) HSP 1 Score: 84.0 bits (206), Expect = 1.500e-12 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 0 Query: 189 LSWKSSGTPVRYL--FKLPVPVDTAGTHVTYRFASDEFDISFAVFFLGVEEDAKMEIVLPAARVNSHQEPVSGDITVHRPGTVILLWDNTYSWFATKALSYSVHLRYP 295 L+W SS V F+LP+ V+ AG+ ++Y F + + DI F++ F G+ +E ++ R SH+ V G + + PGTV+L+WDN YSWF K LSY V L+ P Sbjct: 53 LTWHSSHAIVAPAGRFELPIRVEEAGSDLSYTFETKDMDIDFSITFEGL---TSVEYLVHPTRCASHESTVRGSLDIPGPGTVVLVWDNEYSWFNAKELSYHVGLKTP 157
BLAST of NO26G00800 vs. NCBI_GenBank
Match: XP_008865789.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW06012.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 84.0 bits (206), Expect = 1.500e-12 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 0 Query: 189 LSWKSSGTPVRYL--FKLPVPVDTAGTHVTYRFASDEFDISFAVFFLGVEEDAKMEIVLPAARVNSHQEPVSGDITVHRPGTVILLWDNTYSWFATKALSYSVHLRYP 295 L+W SS V F+LP+ V+ AG+ ++Y F + + DI F++ F G+ +E ++ R SH+ V G + + PGTV+L+WDN YSWF K LSY V L+ P Sbjct: 53 LTWHSSHAIVAPAGRFELPIRVEEAGSDLSYTFETKDMDIDFSITFEGL---TSVEYLVHPTRCASHESTVRGSLDIPGPGTVVLVWDNEYSWFNAKELSYHVGLKTP 157
BLAST of NO26G00800 vs. NCBI_GenBank
Match: XP_009521737.1 (hypothetical protein PHYSODRAFT_556004, partial [Phytophthora sojae] >EGZ26449.1 hypothetical protein PHYSODRAFT_556004, partial [Phytophthora sojae]) HSP 1 Score: 82.4 bits (202), Expect = 4.300e-12 Identity = 45/139 (32.37%), Postives = 76/139 (54.68%), Query Frame = 0 Query: 167 NELDTALSAAVPQAGQPYHTHDLSWKSSGTPVRYL--FKLPVPVDTAGTHVTYRFASDEFDISFAVFFLGVEEDAKMEIVLPAARVNSHQEPVSGDITVHRPGTVILLWDNTYSWFATKALSYSVHLRYPTGPTAERER 304 N LS+ P +P +L WKSS P+ F+LP+ +D + Y F++ ++D++F V + D + +L + R S ++ V G +++ PG V+LLWDN++SW +K L+Y V L+ T P +E E+ Sbjct: 52 NSSSLRLSSESPP--KPPIVDELQWKSSQVPIAASGGFQLPIKLDARKGELHYSFSTRDYDVNFGVQMICA--DGSLIELLDSRRYESQKQQVQGQLSLSGPGMVLLLWDNSFSWLNSKQLAYHVELKQETLPVSEAEK 186
BLAST of NO26G00800 vs. NCBI_GenBank
Match: ETI36453.1 (hypothetical protein F443_17468 [Phytophthora parasitica P1569]) HSP 1 Score: 82.4 bits (202), Expect = 4.300e-12 Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 0 Query: 165 HLNELDTALSAAVPQAGQPYHTHDLSWKSSGTPVRYL--FKLPVPVDTAGTHVTYRFASDEFDISFAVFFLGVEEDAKMEIVLPAARVNSHQEPVSGDITVHRPGTVILLWDNTYSWFATKALSYSVHLRYPTGPTAERER 304 H++ LD+ P +P +L WKSS P+ F+LP+ +D + Y F++ ++D++F V + D + +L R S ++ V G +++ PG V+LLWDN++SW TK L+Y V L+ T P ++ E+ Sbjct: 55 HVSSLDS------PIKHKPPIVDELQWKSSQVPIAASGGFQLPIKLDARKGELHYSFSTRDYDVNFGVQMICA--DGSLIELLDTRRYESQKQKVEGQLSLTGPGMVLLLWDNSFSWVNTKQLAYHVELKQETLPVSDAEK 187
BLAST of NO26G00800 vs. NCBI_GenBank
Match: XP_008895936.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETI36454.1 hypothetical protein, variant [Phytophthora parasitica P1569] >ETN18238.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETP34400.1 hypothetical protein, variant [Phytophthora parasitica P10297] >KUF80216.1 hypothetical protein AM587_10011853 [Phytophthora nicotianae]) HSP 1 Score: 82.4 bits (202), Expect = 4.300e-12 Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 0 Query: 165 HLNELDTALSAAVPQAGQPYHTHDLSWKSSGTPVRYL--FKLPVPVDTAGTHVTYRFASDEFDISFAVFFLGVEEDAKMEIVLPAARVNSHQEPVSGDITVHRPGTVILLWDNTYSWFATKALSYSVHLRYPTGPTAERER 304 H++ LD+ P +P +L WKSS P+ F+LP+ +D + Y F++ ++D++F V + D + +L R S ++ V G +++ PG V+LLWDN++SW TK L+Y V L+ T P ++ E+ Sbjct: 55 HVSSLDS------PIKHKPPIVDELQWKSSQVPIAASGGFQLPIKLDARKGELHYSFSTRDYDVNFGVQMICA--DGSLIELLDTRRYESQKQKVEGQLSLTGPGMVLLLWDNSFSWVNTKQLAYHVELKQETLPVSDAEK 187
BLAST of NO26G00800 vs. NCBI_GenBank
Match: ETL30091.1 (hypothetical protein L916_16893, partial [Phytophthora parasitica] >ETL83328.1 hypothetical protein L917_16722, partial [Phytophthora parasitica] >ETM36545.1 hypothetical protein L914_16805, partial [Phytophthora parasitica]) HSP 1 Score: 82.4 bits (202), Expect = 4.300e-12 Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 0 Query: 165 HLNELDTALSAAVPQAGQPYHTHDLSWKSSGTPVRYL--FKLPVPVDTAGTHVTYRFASDEFDISFAVFFLGVEEDAKMEIVLPAARVNSHQEPVSGDITVHRPGTVILLWDNTYSWFATKALSYSVHLRYPTGPTAERER 304 H++ LD+ P +P +L WKSS P+ F+LP+ +D + Y F++ ++D++F V + D + +L R S ++ V G +++ PG V+LLWDN++SW TK L+Y V L+ T P ++ E+ Sbjct: 63 HVSSLDS------PIKHKPPIVDELQWKSSQVPIAASGGFQLPIKLDARKGELHYSFSTRDYDVNFGVQMICA--DGSLIELLDTRRYESQKQKVEGQLSLTGPGMVLLLWDNSFSWVNTKQLAYHVELKQETLPVSDAEK 195
BLAST of NO26G00800 vs. NCBI_GenBank
Match: ETL30092.1 (hypothetical protein, variant, partial [Phytophthora parasitica] >ETL83329.1 hypothetical protein, variant, partial [Phytophthora parasitica] >ETM36546.1 hypothetical protein, variant, partial [Phytophthora parasitica]) HSP 1 Score: 82.4 bits (202), Expect = 4.300e-12 Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 0 Query: 165 HLNELDTALSAAVPQAGQPYHTHDLSWKSSGTPVRYL--FKLPVPVDTAGTHVTYRFASDEFDISFAVFFLGVEEDAKMEIVLPAARVNSHQEPVSGDITVHRPGTVILLWDNTYSWFATKALSYSVHLRYPTGPTAERER 304 H++ LD+ P +P +L WKSS P+ F+LP+ +D + Y F++ ++D++F V + D + +L R S ++ V G +++ PG V+LLWDN++SW TK L+Y V L+ T P ++ E+ Sbjct: 63 HVSSLDS------PIKHKPPIVDELQWKSSQVPIAASGGFQLPIKLDARKGELHYSFSTRDYDVNFGVQMICA--DGSLIELLDTRRYESQKQKVEGQLSLTGPGMVLLLWDNSFSWVNTKQLAYHVELKQETLPVSDAEK 195
BLAST of NO26G00800 vs. NCBI_GenBank
Match: XP_008895935.1 (hypothetical protein PPTG_03901 [Phytophthora parasitica INRA-310] >ETN18237.1 hypothetical protein PPTG_03901 [Phytophthora parasitica INRA-310] >ETP34399.1 hypothetical protein F442_17319 [Phytophthora parasitica P10297]) HSP 1 Score: 82.4 bits (202), Expect = 4.300e-12 Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 0 Query: 165 HLNELDTALSAAVPQAGQPYHTHDLSWKSSGTPVRYL--FKLPVPVDTAGTHVTYRFASDEFDISFAVFFLGVEEDAKMEIVLPAARVNSHQEPVSGDITVHRPGTVILLWDNTYSWFATKALSYSVHLRYPTGPTAERER 304 H++ LD+ P +P +L WKSS P+ F+LP+ +D + Y F++ ++D++F V + D + +L R S ++ V G +++ PG V+LLWDN++SW TK L+Y V L+ T P ++ E+ Sbjct: 55 HVSSLDS------PIKHKPPIVDELQWKSSQVPIAASGGFQLPIKLDARKGELHYSFSTRDYDVNFGVQMICA--DGSLIELLDTRRYESQKQKVEGQLSLTGPGMVLLLWDNSFSWVNTKQLAYHVELKQETLPVSDAEK 187 The following BLAST results are available for this feature:
BLAST of NO26G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00800 ID=NO26G00800|Name=NO26G00800|organism=Nannochloropsis oceanica|type=gene|length=3641bpback to top protein sequence of NO26G00800.1 >NO26G00800.1-protein ID=NO26G00800.1-protein|Name=NO26G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=496bpback to top Synonyms
Publications
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