NO26G00790, NO26G00790 (gene) Nannochloropsis oceanica

Overview
NameNO26G00790
Unique NameNO26G00790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4165
Alignment locationchr26:265537..270534 +

Link to JBrowse

Properties
Property NameValue
Descriptioncleavage and polyadenylation specificity factor 73-I
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:265537..270534 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro
IPR011108RMMBL
IPR022712Beta_Casp
IPR021718CPSF73-100_C
IPR001279Beta-lactamas-like
Homology
BLAST of NO26G00790 vs. NCBI_GenBank
Match: XP_002288414.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED93850.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 568.9 bits (1465), Expect = 2.900e-158
Identity = 290/556 (52.16%), Postives = 385/556 (69.24%), Query Frame = 0
Query:   20 EETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRME---HRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVP-YQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRS--VGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPFHQSKETLRAFLEELFEG 570
            E+ + ITPLG+ +EVGRSC +L ++  TI+LDCGIHPG  G   LPFFD   D   +D++LI+HFHLDHAASLPYFTE+     FKGRIF THPTKA++RL+L ++++   ++  + G   D+ Q    LYTEADL +C+DKIE+ID+ Q ++     G++F   NAGHVLGAAMF IE+GG  VLYTGDYSME+DRHLMAAE+P Y  +PD+LIVESTYGVQ H  + ERE RFT  + +IV  GGRCL+PVFALGRAQEL+LILDEYW  H  LQ +P+Y+AS  + +A RVY+TY NMMNA +R QMDL NPF F+ I+N +S  V + DD  P+VV ASPG L SG SRQLFDRW     NG+++ GY  E TLA+++++ P+ V  L GR QPL   V+ +SFSAHVD+ QN +F+  V  + I+LVHG + +M  LK AL+     +N         I  P    +++L   +R++A+++GKLAEAP   G  +   +LV++  +++++ P DL TYT LR G VS ++H PF    ETLR FL E+F G
Sbjct:    2 EDIMTITPLGSGQEVGRSCHLLTFRSTTILLDCGIHPGYDGMAGLPFFDR-VDPEQVDVLLITHFHLDHAASLPYFTERT---GFKGRIFMTHPTKAVIRLLLGDYLKLMMMKKGSGGADKDDNQD--VLYTEADLQSCVDKIELIDYHQTIDLNLPSGLKFHALNAGHVLGAAMFFIEVGGRSVLYTGDYSMEEDRHLMAAELPKYHASPDLLIVESTYGVQVHASRAEREARFTGTIERIVTGGGRCLIPVFALGRAQELLLILDEYWQEHPHLQSIPIYYASKMASRALRVYQTYANMMNARIRAQMDLGNPFHFSHIRNLKSIDVNNFDDRGPSVVFASPGMLQSGVSRQLFDRWAGDPKNGVMLAGYAVEHTLAKEIMSQPKEVVTLEGRRQPLNCLVDYVSFSAHVDFVQNRDFITSVNPRNIILVHGAKEEMGRLKGALML---HYNKLPENKRPTIAMPPNEVDVKLIFTRRRSAKVMGKLAEAPPREGDPV-RGILVTQQNSSKIVAPEDLSTYTPLRVGSVSSRLHVPFVGKIETLRLFLNEMFRG 547          
BLAST of NO26G00790 vs. NCBI_GenBank
Match: CCA21396.1 (cleavage and polyadenylation specific factor 3 puta [Albugo laibachii Nc14])

HSP 1 Score: 566.6 bits (1459), Expect = 1.400e-157
Identity = 304/685 (44.38%), Postives = 416/685 (60.73%), Query Frame = 0
Query:   16 NEEDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAH 698
            + ++   + I PLGA  EVGRSC+ILK+KG+TIMLDCG+HPG +G  SLPFFD G +A +IDL+L++HFH+DH A+LP+FTEK     FKGR+F THPTKA+M++ML++ +R   + +            +  +Y + DL  C+ K+E+IDF Q   H GI+F  YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P   +PD+LIVESTYGVQ H    ERE RFT +V  ++RRGGRCL+PVFALGR QEL+LILDE+W AH DL  +P+YFAS  + KA RVY+TY+NMMN  +R+Q+ + NPF F  I N +S+ D DD  P VV+ASPG L SG SRQLF+RWCS   N  ++ GY  EGTLA+K+L+ P  +  + GR  P+  +VE ISFSAH D+     F++++    IVLVHGE+N+M  LK AL +    H+P    Y  NI TP     I L     K A+ +GK+A    + G+ +   +LV       L+   DLP YT+L  G ++Q+ H PF  QS   L  F+ +++E  ++E    E +                                         I+++                VV+ H        +  L W   P+ADM+AD+V+AL M+AQ SP + +++  P   CAH
Sbjct:   11 DSDERHIMRIMPLGAGNEVGRSCIILKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLVTHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVAKVEIIDFHQEKTHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVESVIRRGGRCLIPVFALGRTQELLLILDEHWQAHPDLHDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAVSNPFLFDHISNLKSMDDFDDSGPCVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIVAMDGRVLPMNCTVEYISFSAHADFVGTSGFVEKLVPPNIVLVHGEKNEMMRLKSALNKKF--HDPKT--YRPNIFTPANMQEIVLEFKGEKIAKAIGKIASEQPQQGKVI-SGLLVEHDSFIHLMEEEDLPLYTKLVSGKITQRQHIPFVQQSFHVLETFIRKMYEDVVKENENSEQS--------------------------------------RLIIDKK----------------VVLTHFPPE----KILLEWSTEPIADMIADSVVALTMQAQASPASFKISQHPIAACAH 615          
BLAST of NO26G00790 vs. NCBI_GenBank
Match: POM81377.1 (Cleavage and polyadenylation specificity factor subunit 3 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 566.2 bits (1458), Expect = 1.900e-157
Identity = 309/688 (44.91%), Postives = 416/688 (60.47%), Query Frame = 0
Query:   18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAHRRGGK 703
            ++   + I PLGA  EVGRSC++LK+KG+TIMLDCG+HPG +G  SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK     FKGR+F THPTKA+M++ML++ +R   + +            +  +Y + DL  C+ K+E+IDF Q M H GI+F  YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P   +PD+LIVESTYGVQ H    ERE RFT +V  +VRRGGRCL+PVFALGR QEL+LILDE+W AH DLQ +P+YFAS  + KA RVY+TY+NMMN  +R+Q+ + NPF+F  I N +S+ D DD  P+VV+ASPG L SG SRQLF+RWCS   N  ++ GY  EGTLA+K+L+ P  +  L GR  P+  +VE ISFSAH D+     F++++    IVLVHGE+N+M  LK AL +    ++P    Y  NI TP     I L     K A+ +G LA    + G  +   +LV     T L+   DL TYT+L  G ++QK H PF + S + L  F+ +++E                  +HL                                        +KE    +    VV      +G   +  + W   P ADM+AD+V+ALAM AQ SP + +++  P   C H    K
Sbjct:   12 DERHIMRIMPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRAHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKF--NDPKV--YHPNISTPANMQEIVLEFKGEKIAKAIGGLASDQPKNG-TVISGLLVEVDSQTHLMDKDDLSTYTKLISGSITQKQHVPFEYNSFDVLITFIRQMYE----------------DVVHL----------------------------------------EKENRVVVCKQVVVTRCAVTKGATEKLVVEWTSAPTADMIADSVIALAMHAQASPASFKLSGQPTAACPHDHSKK 621          
BLAST of NO26G00790 vs. NCBI_GenBank
Match: CCI46934.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 565.1 bits (1455), Expect = 4.200e-157
Identity = 302/682 (44.28%), Postives = 415/682 (60.85%), Query Frame = 0
Query:   16 NEEDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVPCCA 697
            + ++   + I PLGA  EVGRSC+ILK+KG+TIMLDCG+HPG +G  SLPFFD G +A +IDL+L++HFH+DH A+LP+FTEK     FKGR+F THPTKA+M++ML++ +R   + +            +  +Y + DL  C+ K+E+IDF Q   H GI+F  YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P   +PD+LIVESTYGVQ H    ERE RFT +V  ++RRGGRCL+PVFALGR QEL+LILDE+W AH DL  +P+YFAS  + KA RVY+TY+NMMN  +R+Q+ + NPF F  I N +S+ D DD  P VV+ASPG L SG SRQLF+RWCS   N  ++ GY  EGTLA+K+L+ P  +  + GR  P+  +VE ISFSAH D+     F++++    IVLVHGE+N+M  LK AL +    H+P    Y  NI TP     I L     K A+ +GK+A    + G+ +   +LV     T L+   DLP YT+L  G ++Q+ H PF  QS   L  F+ ++++   + ++ +E                                                  GK   +   +   VV+ H        +  L W   P+ADM+AD+V+AL M+AQ SP + +++  P  A
Sbjct:   11 DSDERHIMRIMPLGAGNEVGRSCIILKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLVTHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVAKVEIIDFHQEKTHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVESVIRRGGRCLIPVFALGRTQELLLILDEHWQAHPDLHNIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAVSNPFLFDHISNLKSMDDFDDSGPCVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIVAMDGRVLPMNCTVEYISFSAHADFVGTSGFVEKLVPPNIVLVHGEKNEMMRLKSALNKKF--HDPKT--YRPNIFTPANMQEIVLEFKGEKIAKAIGKMASEQPQQGKVI-SGLLVEHDSFTHLMEEEDLPLYTKLVSGKITQRQHIPFVQQSFHVLETFIRQMYD---DVVINDEM-------------------------------------------------GKARLIIDKK---VVITHFSSE----KILLEWTTEPIADMIADSVVALTMQAQASPASFKVSKHPIAA 611          
BLAST of NO26G00790 vs. NCBI_GenBank
Match: XP_024571869.1 (cleavage and polyadenylation specificity factor subunit 3 [Plasmopara halstedii] >CEG35500.1 cleavage and polyadenylation specificity factor subunit 3 [Plasmopara halstedii])

HSP 1 Score: 564.7 bits (1454), Expect = 5.400e-157
Identity = 310/698 (44.41%), Postives = 419/698 (60.03%), Query Frame = 0
Query:   18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVPCCA----HRRGGKKGGRELDE 711
            ++   + ITPLGA  EVGRSC++LK+KG+TIMLDCG+HPG +G  SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK     FKGR+F THPTKA+M++ML++ +R   + +            +  +Y + DL  C+ K+E+IDF Q M H GI+F  YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P   +PD+LIVESTYGVQ H    ERE RFT +V  +VRRGGRCL+PVFALGR QEL+LILDE+W +H DLQ +P+YFAS  + KA RVY+TY+NMMN  +R+Q+ + NPF+F  I N +S+ D DD  P+VV+ASPG L SG SRQLF+RWCS   N  ++ GY  EGTLA+K+L+ P  +  L GR  P+  +VE ISFSAH D+     F++++    IVLVHGE+N+M  LK AL++    ++P    Y   I TP     I L     K A+ +G LA    + G  +   +LV     T L+   DL  YT+L  G ++QK H PF + S + L  FL +++E                  +HL                                        K E    +    V+   L  +G   +  + W   P ADM+AD+V+ALAM AQ SP + +++  P  A    H R        +DE
Sbjct:   12 DERHIMRITPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALMKKF--NDPKV--YHPTISTPANMQEIVLEFKGEKIAKAIGGLASDQPKNG-TVISGLLVEVDSQTHLMAKEDLSAYTKLISGKITQKQHVPFEYNSFDVLITFLCQMYE----------------DVVHL----------------------------------------KNENRLVVCKQVVITRCLVTKGATEKLIVEWTSAPTADMIADSVVALAMHAQASPASFKLSGQPTAACPHDHTRQPSNFDESVDE 631          
BLAST of NO26G00790 vs. NCBI_GenBank
Match: ETP33735.1 (hypothetical protein F442_17788 [Phytophthora parasitica P10297])

HSP 1 Score: 563.9 bits (1452), Expect = 9.300e-157
Identity = 308/695 (44.32%), Postives = 419/695 (60.29%), Query Frame = 0
Query:   18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAHRRGGKKGGRELD 710
            ++   + I PLGA  EVGRSC++LK+KG+TIMLDCG+HPG +G  SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK     FKGR+F THPTKA+M++ML++ +R   + +            +  +Y + DL  C+ K+E+IDF Q M H GI+F  YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P   +PD+LIVESTYGVQ H    ERE RFT +V  +VRRGGRCL+PVFALGR QEL+LILDE+W +H DLQ +P+YFAS  + KA RVY+TY+NMMN  +R+Q+ + NPF+F  I N +S+ D DD  P+VV+ASPG L SG SRQLF+RWCS   N  ++ GY  EGTLA+K+L+ P  +  L GR  P+  +VE ISFSAH D+     F++++    IVLVHGE+N+M  LK AL +    ++P    Y  +I TP     I L     K A+ +G LA    + G  +   +LV     T L+   DL TYT+L  G ++QK H PF + S + L  F+ +++E                  +HL                                        +KE    +    VV      +G   +  + W   P ADM+AD+V+ALAM AQ SP + ++++ P   C H    K    + D
Sbjct:   12 DERHIMRIMPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKF--NDPKV--YHPSISTPANMQEIVLEFKGEKIAKAIGGLASDQPKNG-TVISGLLVEVDSQTHLMDKEDLSTYTKLISGTITQKQHVPFEYNSFDVLITFIRQMYE----------------DVVHL----------------------------------------EKENRVVVCKQVVVTRCAVAKGATEKLVVEWTSAPTADMIADSVIALAMHAQASPASFKLSNQPTAACPHDHSKKTEANDKD 628          
BLAST of NO26G00790 vs. NCBI_GenBank
Match: XP_002905073.1 (cleavage and polyadenylation specificity factor subunit 3 [Phytophthora infestans T30-4] >EEY53455.1 cleavage and polyadenylation specificity factor subunit 3 [Phytophthora infestans T30-4])

HSP 1 Score: 563.9 bits (1452), Expect = 9.300e-157
Identity = 307/688 (44.62%), Postives = 418/688 (60.76%), Query Frame = 0
Query:   18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAHRRGGK 703
            ++   + I PLGA  EVGRSC++LK+KG+TIMLDCG+HPG +G  SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK     FKGR+F THPTKA+M++ML++ +R   + +            +  +Y + DL  C+ K+E+IDF Q M H GI+F  YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P   +PD+LIVESTYGVQ H    ERE RFT +V  +VRRGGRCL+PVFALGR QEL+LILDE+W +H DLQ +P+YFAS  + KA RVY+TY+NMMN  +R+Q+ + NPF+F  I N +S+ D DD  P+VV+ASPG L SG SRQLF+RWCS   N  ++ GY  EGTLA+K+L+ P  +  L GR  P+  +VE ISFSAH D+     F++++    IVLVHGE+N+M  LK AL +    ++P    Y  +I TP     I L     K A+ +G LA    + G  +   +LV     T L+   DL TYT+L  G ++QK H PF + S + L  F+ +++E                  +HL                                        +KE   A+    VV      +G   +  + W   P ADM+AD+++ALAM AQ SP + ++++ P   C H    K
Sbjct:   12 DERHIMRIMPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKF--NDPKV--YHPSISTPANMQEIVLEFKGEKIAKAIGGLASNQPKNG-TIISGLLVEVDSQTHLMDKEDLSTYTKLISGTITQKQHVPFEYNSFDVLITFIRQMYE----------------DVVHL----------------------------------------EKENRVAVCKQVVVTRCAVAKGATEKLVVEWTSAPTADMIADSLIALAMHAQASPASFKLSNQPTAACPHDHSKK 621          
BLAST of NO26G00790 vs. NCBI_GenBank
Match: GAX15257.1 (cleavage and polyadenylation specificity factor subunit 3 [Fistulifera solaris])

HSP 1 Score: 563.9 bits (1452), Expect = 9.300e-157
Identity = 305/679 (44.92%), Postives = 421/679 (62.00%), Query Frame = 0
Query:   20 EETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDS-GPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRS--VGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQA-LFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPFHQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVPC 695
            E+ + +TPLGA +EVGRSC +L+++G TIMLD GIHPG  G + LPF D   PD   ID++L++HFHLDHAASLPY TE+     FKGRIF THPTK+++RL+L +++R             +  + E  LYTEA+L +C++KIE+ID+   +   G+ F   NAGHVLGA MF +E+GG  VLYTGDYSME DRHLMAAE+P Q  PD+LIVESTYGVQ H  + ERE RFT  V ++V RGGRCL+PVFALGRAQEL+LILDEYW A+  LQK+P+Y+AS  + +A RVY+TY NMMNA +R QMD+ NPF F FI+N +S  V + DD  P+VV ASPG L SG SRQLFDRW +   NG+++ GY  E TLA++++  P+ V  L GR QPL   V+ +SFSAHVD+ QN  F+ +V  + I+LVHG++++M  LK ALV     +  ++      I  P     ++L   +R++A+++G LA    EP +    + ++V+ SF++++++P DL TYT LR G +S K+H PF  +  TL  FL E++ G   +  E E    S+++  L                                       G K  V   +  GV +             + W+  P  D++AD+V+AL + AQ S  ++R+TS PC
Sbjct:    2 EDIMSLTPLGAGQEVGRSCHVLEFRGMTIMLDIGIHPGYDGMNGLPFLDRIEPD--QIDVLLVTHFHLDHAASLPYLTERTN---FKGRIFMTHPTKSVLRLLLGDYLRL---------LQMNNAKAEDVLYTEAELQSCINKIELIDYHTTVTVGGLSFHALNAGHVLGACMFWMELGGRSVLYTGDYSMEQDRHLMAAEIPDQ-KPDLLIVESTYGVQAHTSRPEREARFTGTVERVVTRGGRCLIPVFALGRAQELLLILDEYWQANPHLQKIPIYYASKLASRALRVYQTYANMMNARIRAQMDISNPFSFRFIQNLKSIDVHNFDDSGPSVVFASPGMLQSGVSRQLFDRWAADPKNGVLIAGYAVEHTLAKEIMAQPKEVVSLEGRRQPLNCLVDYVSFSAHVDFVQNRSFITQVAPRHIILVHGQKDEMGRLKSALVHMYKQYPENK---RPTITMPPNLQEVKLKFARRRSAKVMGTLANREDEPQEGEKVEGIMVTNSFSSKIVSPDDLATYTPLRLGSISSKLHVPFCGAATTLELFLNEMYHG--VKKYETEGIEGSITNFELQ--------------------------------------GGKVSVTIGQSAGVAI-------------VEWEASPAGDVIADSVVALLLHAQSSSASIRLTSKPC 609          
BLAST of NO26G00790 vs. NCBI_GenBank
Match: ETI35792.1 (hypothetical protein F443_17940 [Phytophthora parasitica P1569])

HSP 1 Score: 563.1 bits (1450), Expect = 1.600e-156
Identity = 307/688 (44.62%), Postives = 417/688 (60.61%), Query Frame = 0
Query:   18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAHRRGGK 703
            ++   + I PLGA  EVGRSC++LK+KG+TIMLDCG+HPG +G  SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK     FKGR+F THPTKA+M++ML++ +R   + +            +  +Y + DL  C+ K+E+IDF Q M H GI+F  YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P   +PD+LIVESTYGVQ H    ERE RFT +V  +VRRGGRCL+PVFALGR QEL+LILDE+W +H DLQ +P+YFAS  + KA RVY+TY+NMMN  +R+Q+ + NPF+F  I N +S+ D DD  P+VV+ASPG L SG SRQLF+RWCS   N  ++ GY  EGTLA+K+L+ P  +  L GR  P+  +VE ISFSAH D+     F++++    IVLVHGE+N+M  LK AL +    ++P    Y  +I TP     I L     K A+ +G LA    + G  +   +LV     T L+   DL TYT+L  G ++QK H PF + S + L  F+ +++E                  +HL                                        +KE    +    VV      +G   +  + W   P ADM+AD+V+ALAM AQ SP + ++++ P   C H    K
Sbjct:   12 DERHIMRIMPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKF--NDPKV--YHPSISTPANMQEIVLEFKGEKIAKAIGGLASDQPKNG-TVISGLLVEVDSQTHLMDKEDLSTYTKLISGTITQKQHVPFEYNSFDVLITFIRQMYE----------------DVVHL----------------------------------------EKENRVVVCKQVVVTRCAVAKGATEKLVVEWTSAPTADMIADSVIALAMHAQASPASFKLSNQPTAACPHDHSKK 621          
BLAST of NO26G00790 vs. NCBI_GenBank
Match: XP_008896459.1 (hypothetical protein PPTG_04321 [Phytophthora parasitica INRA-310] >ETK76032.1 hypothetical protein L915_17463 [Phytophthora parasitica] >ETL29471.1 hypothetical protein L916_17355 [Phytophthora parasitica] >ETL82692.1 hypothetical protein L917_17188 [Phytophthora parasitica] >ETN18849.1 hypothetical protein PPTG_04321 [Phytophthora parasitica INRA-310] >ETP05617.1 hypothetical protein F441_17810 [Phytophthora parasitica CJ01A1] >KUF75915.1 Cleavage and polyadenylation specificity factor subunit 3 [Phytophthora nicotianae])

HSP 1 Score: 563.1 bits (1450), Expect = 1.600e-156
Identity = 307/688 (44.62%), Postives = 417/688 (60.61%), Query Frame = 0
Query:   18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAHRRGGK 703
            ++   + I PLGA  EVGRSC++LK+KG+TIMLDCG+HPG +G  SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK     FKGR+F THPTKA+M++ML++ +R   + +            +  +Y + DL  C+ K+E+IDF Q M H GI+F  YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P   +PD+LIVESTYGVQ H    ERE RFT +V  +VRRGGRCL+PVFALGR QEL+LILDE+W +H DLQ +P+YFAS  + KA RVY+TY+NMMN  +R+Q+ + NPF+F  I N +S+ D DD  P+VV+ASPG L SG SRQLF+RWCS   N  ++ GY  EGTLA+K+L+ P  +  L GR  P+  +VE ISFSAH D+     F++++    IVLVHGE+N+M  LK AL +    ++P    Y  +I TP     I L     K A+ +G LA    + G  +   +LV     T L+   DL TYT+L  G ++QK H PF + S + L  F+ +++E                  +HL                                        +KE    +    VV      +G   +  + W   P ADM+AD+V+ALAM AQ SP + ++++ P   C H    K
Sbjct:   12 DERHIMRIMPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKF--NDPKV--YHPSISTPANMQEIVLEFKGEKIAKAIGGLASDQPKNG-TVISGLLVEVDSQTHLMDKEDLSTYTKLISGTITQKQHVPFEYNSFDVLITFIRQMYE----------------DVVHL----------------------------------------EKENRVVVCKQVVVTRCAVAKGATEKLVVEWTSAPTADMIADSVIALAMHAQASPASFKLSNQPTAACPHDHSKK 621          
The following BLAST results are available for this feature:
BLAST of NO26G00790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002288414.12.900e-15852.16predicted protein, partial [Thalassiosira pseudona... [more]
CCA21396.11.400e-15744.38cleavage and polyadenylation specific factor 3 put... [more]
POM81377.11.900e-15744.91Cleavage and polyadenylation specificity factor su... [more]
CCI46934.14.200e-15744.28unnamed protein product [Albugo candida][more]
XP_024571869.15.400e-15744.41cleavage and polyadenylation specificity factor su... [more]
ETP33735.19.300e-15744.32hypothetical protein F442_17788 [Phytophthora para... [more]
XP_002905073.19.300e-15744.62cleavage and polyadenylation specificity factor su... [more]
GAX15257.19.300e-15744.92cleavage and polyadenylation specificity factor su... [more]
ETI35792.11.600e-15644.62hypothetical protein F443_17940 [Phytophthora para... [more]
XP_008896459.11.600e-15644.62hypothetical protein PPTG_04321 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005995NSK005995Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00790.1NO26G00790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO26G00790.2NO26G00790.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632588gene_7901Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101523g1gene7331Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00790.1NO26G00790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO26G00790.2NO26G00790.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00790 ID=NO26G00790|Name=NO26G00790|organism=Nannochloropsis oceanica|type=gene|length=4165bp
TAATCGGGCTTCTTCGATACGGACTTCCGATAGCAAAATTTATGCGTGGC
TTCCGGGTAGGATATTGCATATATGCGTGCATGTACGTGTGTTCTAACCG
CACATGTATGCATGTATGTGTATATCGCTATCGCATTTATTGCCTTTCTT
GTCCCTGGTTGACGCCTTTTGGGGCGTTTGTTAACAATATCAGGCACAAG
gtagggccgcgcacattcacatgatatttatctccctctcctttgtatta
ttgcatttcctccaccagatttgcttgatgacgtcggtatctcacaccct
ccctcccgtccctctctccttcccgccctcccgccctcagCGGATGGAGC
ACAGGGGCATTCGGTTCTGGTGCTATAACGCGGGCCACGTCTTAGGAGCT
GCCATGTTCATGATTGAGATTGGGGGTCTCCGCGTGCTGTATACAGGAGA
TTATTCGATGGAGGACGATCGgtaggtccctccttccctccctccctccc
tccctccctccctccctcctgtgcattcataacttctccctccctccctc
cctccctcccttccttcttacctccctcttataaagACATCTGATGGCAG
CTGAAGTTCCCTATCAGTACACTCCCGATATTCTCATCGTCGAGTCCACC
TACGGAGTGCAGAATCATCCGCCCAAGGAGGAGAGAGAGCGTCGCTTCAC
AGgtatgtatcgccttctctccctccctctctccctccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctccct
ccctccctccctctctctctctgcctccctccctccctccctcaaaaaag
ggatatgagagcgctttcatagcgaggtatggcaacctctcgagtcgtgg
tgcacgattgaagccgaccctccctcgtatgaacttccctcccttcctcc
ctcccttcctccctcccttcctccctcccttcctccccccagACGAGGTC
GCCAAGATCGTCCGCCGTGGGGGTCGGTGCCTCTTGCCTGTCTTCGCCCT
CGGCCGAGCCCAAGAGCTGATGCTAATTCTAGACGAATACTGGCATGCTC
ACAAGGACCTGCAGAAGgtacccctccctccctccctccctccctctccc
cctccttgctttctccctccctccacgaaatctaacgcaccacgcccccc
cccttcccagGTGCCCGTCTACTTCGCCTCATACACGTCCGAGAAGGCCC
ACCGTGTCTACGAGACTTACGTCAACATGATGAACGCTCACGTACGCCAG
CAGgtacgtgccttccttccctccgtccgtccgtccgtccctcccgccct
ccctccctccttccggccctccctccctccccacatttcttctacccgtc
cctctccatcctcaattcccgccatcgctctctccccccccctccctttc
tgtctcttccactctccttcacccgaaccctctccgccctccccccctcc
ttccccctccagATGGACCTTGTCAACCCCTTTCGCTTCGCCTTCATTAA
AAACTGTCGCTCTGTGGGTGATATCGATGACTTCCAACCCGCTGTTGTCC
TTGCCTCTCCTGGCTTCCTCAATTCGGGGCCCTCGCGCCAGCTTTTCGAT
AGgtccgtccctccctccctccctccctccccccctctttctttccgtcc
ctcctcccctccctcttttgtttccaacccccctatttatcctccctccc
tccctccctccctcctccctccctccctccctgctcagGTGGTGTTCATC
CGACGCCAATGGCCTGGTGATGACCGGCTACACGCAAGAAGGCACGCTGG
CCCGGAAACTTCTAACTCACCCGGAGGTGGTCGAGGACTTGAGGGGACGG
CCACAGCCGCTGAAAGCAAGgtaagccactccatgcttccctccctccct
ccctccctcccacccaccctccctccctccctccctccctccctcccacc
ctccagacgacacaaaagcaatgaatttgcacccttctcactcatgcatc
cctccgcccctccctccctccctccccccccctccattccttcctccctc
acagCGTGGAGTCCATCTCCTTCTCGGCCCATGTTGACTACCGACAGAAC
GAGGAATTTATGAAGCGAGTTAAGTCGCAAATTATTGTGTTGGTGCACGG
GGAGCAGAACCAGgtgaagccctccctccctccttccctcccttcctcct
ttcccccttcccttcctccctccctccttccttgcctccttccctcactc
cctttttccctccttccctccctccctccttcccatggcctttctcccac
cacatcaacggcactccttcacctcccgtctctccccccgtccgtccctc
cctccctccctccctccccccctccctccgtagATGAACGAGCTCAAGCG
TGCCCTGGTGCGGACAATCGGCTCCCACAATCCTTCTCAGGGAGGATATG
GCGCGAACATCCTCACCCCCGACCTCTGCAGTAACATCCAGCTGACCATC
CCCCAAAGAAAGACGGCGCGGATCCTTGGGAAGCTGGCCGAAGCACCGTT
AGAACgtaagtctaccatatccatttttatgtatatatatgtctatgtat
atattatgtatgtatttcatattcatctttgaataaaacgatgcataaac
gtgatgaatcaactaacccccccctcccccccccttccctttgtcttgac
agCCGGGCAAGCGCTCTTTGACGCCGTCCTTGTCTCGAGAAGTTTCACGA
CCCGCCTCCTCACTCCTGCAGACCTTCCCACCTACACTCAACTCCGCCCC
GGGGGAGTTAGTCAGAAGGTTCATTTCCCCTTTCATCAATCCAAAGAGAC
CTTGAGGGCTTTCTTGGAAGAACTGTTCGAGGGCGGGATAGAGGAATTGG
TGGAGGAAGAGGCCGCCTTTCCCTCCCTCTCTTCCTTGCACTTGTCTGCT
AGGGCGACGGCAACGGGGAGTGGTGGAGGGGGAGGGGGAGGGGGAATGGG
TGTAGTGGGAGGAGGGAGAAGAACGCCTGTGTCTGGAGGGATTGAGGAGG
AGAGGGAGGGCGGGAAGAAGGAGGGTGTGTGTGCGTTGAGGATCAACGGA
GTGGTGGTGTTTCATTTGGACCGAAGGGGGGGAGGAGGGAGAGGGTGCTT
GGTGTGGGATGGGGGTCCCGTGGCGGATATGGTTGCGGATGCTGTCTTGG
CGCTGGCGATGGAGGCGCAGGTAAGTCCGATGGCCTTGAGGATGACGAGT
GTTCCATGTTGTGCACATAGGAGGGGGGGAAAGAAGGGCGGGAGGGAGTT
GGATGAGGAGAAGGAGGCGGCGGGAGCGGGGGCAGTAGCCGTCGCTGAGG
AGAAGGAGGAGGTGGAGGCGGAGGAGGAGGGGAAAAAGACCGAGACAAGA
GGGAGGGGAAAGGGGGAAAAGAAAGAAGAGGAGGAGCAAGAGGAAGAGGA
AAAGGAAGAGGAGGAAACCCCGCCGATCAAGCCAGAAGGAGACGAAGACG
GTGCACAAAAGGAGAAGCAGCAGCTACAGCACCAACAAGGGATCAGCAGG
AGCAGCCGGAGCGGTGCGAGCACGACCACCAACAAATCCAAGGCAGATCC
GCACACCCGAAAGCTTAGACGTCTCTACCGTATCCTGTCCTCAGTCTACG
GCACTTCCTCTCTCTCTCTCGACCTTTCCATCCTCCAAATCACGCTCTCT
CTGCCGGGGGGAAGCGAGTGCCGGGTGCGCCTTGAAGTGGGGCTGGAGGG
AGGGAAGGAGGGAGGGCAAGGGAGGATGGAGGTAACAGCGGATGACGGGG
TGGTGCTGGAGCAGGTGCGGAATGTAGTGAGGCGTGTCGGTGGGACGTTG
AACGATAAGGTGGTGGCTGCTGTGGGGGTTGGAGGAGGAGGGTATGGAGG
AAGTGGGGCGGGAAGGGGGGAAGGAGAGATGGAGGAGGAGGAGGAAGGGA
GGGAGGTAGGGATGGACGAGGGGGTTGGGGAGGTGGTGAAGAAGGAGGAG
GTGGCTGAGGAGGAGGAAAGATAGAAGAAGGTGGGGAAAAATAGAGGGTT
AAGGAGGCACGCGAAAGATGAATAAATAACAACAAGTCATGATCGCCTTA
TTTCCAGACTTTTTA
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protein sequence of NO26G00790.1

>NO26G00790.1-protein ID=NO26G00790.1-protein|Name=NO26G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=949bp
MAYKRPHHHPTRQGVNEEDEETVYITPLGAAKEVGRSCLILKYKGRTIML
DCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQ
GGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLY
TEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLR
VLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRF
TDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFAS
YTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQP
AVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPE
VVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQN
QMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILG
KLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHF
PFHQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSARATATGSGG
GGGGGGMGVVGGGRRTPVSGGIEEEREGGKKEGVCALRINGVVVFHLDRR
GGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVPCCAHRRG
GKKGGRELDEEKEAAGAGAVAVAEEKEEVEAEEEGKKTETRGRGKGEKKE
EEEQEEEEKEEEETPPIKPEGDEDGAQKEKQQLQHQQGISRSSRSGASTT
TNKSKADPHTRKLRRLYRILSSVYGTSSLSLDLSILQITLSLPGGSECRV
RLEVGLEGGKEGGQGRMEVTADDGVVLEQVRNVVRRVGGTLNDKVVAAVG
VGGGGYGGSGAGRGEGEMEEEEEGREVGMDEGVGEVVKKEEVAEEEER*
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protein sequence of NO26G00790.2

>NO26G00790.2-protein ID=NO26G00790.2-protein|Name=NO26G00790.2|organism=Nannochloropsis oceanica|type=polypeptide|length=833bp
MRGFRVGYCIYACMYVCSNRTCMHVCVYRYRIYCLSCPWLTPFGAFVNNI
RHKRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLM
AAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLL
PVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNM
MNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSR
QLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASV
ESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSH
NPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDA
VLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPFHQSKETLRAFLEEL
FEGGIEELVEEEAAFPSLSSLHLSARATATGSGGGGGGGGMGVVGGGRRT
PVSGGIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVA
DMVADAVLALAMEAQVSPMALRMTSVPCCAHRRGGKKGGRELDEEKEAAG
AGAVAVAEEKEEVEAEEEGKKTETRGRGKGEKKEEEEQEEEEKEEEETPP
IKPEGDEDGAQKEKQQLQHQQGISRSSRSGASTTTNKSKADPHTRKLRRL
YRILSSVYGTSSLSLDLSILQITLSLPGGSECRVRLEVGLEGGKEGGQGR
MEVTADDGVVLEQVRNVVRRVGGTLNDKVVAAVGVGGGGYGGSGAGRGEG
EMEEEEEGREVGMDEGVGEVVKKEEVAEEEER*
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Synonyms
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