NO26G00790, NO26G00790 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00790 vs. NCBI_GenBank
Match: XP_002288414.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED93850.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 568.9 bits (1465), Expect = 2.900e-158 Identity = 290/556 (52.16%), Postives = 385/556 (69.24%), Query Frame = 0
Query: 20 EETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRME---HRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVP-YQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRS--VGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPFHQSKETLRAFLEELFEG 570
E+ + ITPLG+ +EVGRSC +L ++ TI+LDCGIHPG G LPFFD D +D++LI+HFHLDHAASLPYFTE+ FKGRIF THPTKA++RL+L ++++ ++ + G D+ Q LYTEADL +C+DKIE+ID+ Q ++ G++F NAGHVLGAAMF IE+GG VLYTGDYSME+DRHLMAAE+P Y +PD+LIVESTYGVQ H + ERE RFT + +IV GGRCL+PVFALGRAQEL+LILDEYW H LQ +P+Y+AS + +A RVY+TY NMMNA +R QMDL NPF F+ I+N +S V + DD P+VV ASPG L SG SRQLFDRW NG+++ GY E TLA+++++ P+ V L GR QPL V+ +SFSAHVD+ QN +F+ V + I+LVHG + +M LK AL+ +N I P +++L +R++A+++GKLAEAP G + +LV++ +++++ P DL TYT LR G VS ++H PF ETLR FL E+F G
Sbjct: 2 EDIMTITPLGSGQEVGRSCHLLTFRSTTILLDCGIHPGYDGMAGLPFFDR-VDPEQVDVLLITHFHLDHAASLPYFTERT---GFKGRIFMTHPTKAVIRLLLGDYLKLMMMKKGSGGADKDDNQD--VLYTEADLQSCVDKIELIDYHQTIDLNLPSGLKFHALNAGHVLGAAMFFIEVGGRSVLYTGDYSMEEDRHLMAAELPKYHASPDLLIVESTYGVQVHASRAEREARFTGTIERIVTGGGRCLIPVFALGRAQELLLILDEYWQEHPHLQSIPIYYASKMASRALRVYQTYANMMNARIRAQMDLGNPFHFSHIRNLKSIDVNNFDDRGPSVVFASPGMLQSGVSRQLFDRWAGDPKNGVMLAGYAVEHTLAKEIMSQPKEVVTLEGRRQPLNCLVDYVSFSAHVDFVQNRDFITSVNPRNIILVHGAKEEMGRLKGALML---HYNKLPENKRPTIAMPPNEVDVKLIFTRRRSAKVMGKLAEAPPREGDPV-RGILVTQQNSSKIVAPEDLSTYTPLRVGSVSSRLHVPFVGKIETLRLFLNEMFRG 547
BLAST of NO26G00790 vs. NCBI_GenBank
Match: CCA21396.1 (cleavage and polyadenylation specific factor 3 puta [Albugo laibachii Nc14]) HSP 1 Score: 566.6 bits (1459), Expect = 1.400e-157 Identity = 304/685 (44.38%), Postives = 416/685 (60.73%), Query Frame = 0
Query: 16 NEEDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAH 698
+ ++ + I PLGA EVGRSC+ILK+KG+TIMLDCG+HPG +G SLPFFD G +A +IDL+L++HFH+DH A+LP+FTEK FKGR+F THPTKA+M++ML++ +R + + + +Y + DL C+ K+E+IDF Q H GI+F YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P +PD+LIVESTYGVQ H ERE RFT +V ++RRGGRCL+PVFALGR QEL+LILDE+W AH DL +P+YFAS + KA RVY+TY+NMMN +R+Q+ + NPF F I N +S+ D DD P VV+ASPG L SG SRQLF+RWCS N ++ GY EGTLA+K+L+ P + + GR P+ +VE ISFSAH D+ F++++ IVLVHGE+N+M LK AL + H+P Y NI TP I L K A+ +GK+A + G+ + +LV L+ DLP YT+L G ++Q+ H PF QS L F+ +++E ++E E + I+++ VV+ H + L W P+ADM+AD+V+AL M+AQ SP + +++ P CAH
Sbjct: 11 DSDERHIMRIMPLGAGNEVGRSCIILKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLVTHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVAKVEIIDFHQEKTHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVESVIRRGGRCLIPVFALGRTQELLLILDEHWQAHPDLHDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAVSNPFLFDHISNLKSMDDFDDSGPCVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIVAMDGRVLPMNCTVEYISFSAHADFVGTSGFVEKLVPPNIVLVHGEKNEMMRLKSALNKKF--HDPKT--YRPNIFTPANMQEIVLEFKGEKIAKAIGKIASEQPQQGKVI-SGLLVEHDSFIHLMEEEDLPLYTKLVSGKITQRQHIPFVQQSFHVLETFIRKMYEDVVKENENSEQS--------------------------------------RLIIDKK----------------VVLTHFPPE----KILLEWSTEPIADMIADSVVALTMQAQASPASFKISQHPIAACAH 615
BLAST of NO26G00790 vs. NCBI_GenBank
Match: POM81377.1 (Cleavage and polyadenylation specificity factor subunit 3 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 566.2 bits (1458), Expect = 1.900e-157 Identity = 309/688 (44.91%), Postives = 416/688 (60.47%), Query Frame = 0
Query: 18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAHRRGGK 703
++ + I PLGA EVGRSC++LK+KG+TIMLDCG+HPG +G SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK FKGR+F THPTKA+M++ML++ +R + + + +Y + DL C+ K+E+IDF Q M H GI+F YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P +PD+LIVESTYGVQ H ERE RFT +V +VRRGGRCL+PVFALGR QEL+LILDE+W AH DLQ +P+YFAS + KA RVY+TY+NMMN +R+Q+ + NPF+F I N +S+ D DD P+VV+ASPG L SG SRQLF+RWCS N ++ GY EGTLA+K+L+ P + L GR P+ +VE ISFSAH D+ F++++ IVLVHGE+N+M LK AL + ++P Y NI TP I L K A+ +G LA + G + +LV T L+ DL TYT+L G ++QK H PF + S + L F+ +++E +HL +KE + VV +G + + W P ADM+AD+V+ALAM AQ SP + +++ P C H K
Sbjct: 12 DERHIMRIMPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRAHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKF--NDPKV--YHPNISTPANMQEIVLEFKGEKIAKAIGGLASDQPKNG-TVISGLLVEVDSQTHLMDKDDLSTYTKLISGSITQKQHVPFEYNSFDVLITFIRQMYE----------------DVVHL----------------------------------------EKENRVVVCKQVVVTRCAVTKGATEKLVVEWTSAPTADMIADSVIALAMHAQASPASFKLSGQPTAACPHDHSKK 621
BLAST of NO26G00790 vs. NCBI_GenBank
Match: CCI46934.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 565.1 bits (1455), Expect = 4.200e-157 Identity = 302/682 (44.28%), Postives = 415/682 (60.85%), Query Frame = 0
Query: 16 NEEDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVPCCA 697
+ ++ + I PLGA EVGRSC+ILK+KG+TIMLDCG+HPG +G SLPFFD G +A +IDL+L++HFH+DH A+LP+FTEK FKGR+F THPTKA+M++ML++ +R + + + +Y + DL C+ K+E+IDF Q H GI+F YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P +PD+LIVESTYGVQ H ERE RFT +V ++RRGGRCL+PVFALGR QEL+LILDE+W AH DL +P+YFAS + KA RVY+TY+NMMN +R+Q+ + NPF F I N +S+ D DD P VV+ASPG L SG SRQLF+RWCS N ++ GY EGTLA+K+L+ P + + GR P+ +VE ISFSAH D+ F++++ IVLVHGE+N+M LK AL + H+P Y NI TP I L K A+ +GK+A + G+ + +LV T L+ DLP YT+L G ++Q+ H PF QS L F+ ++++ + ++ +E GK + + VV+ H + L W P+ADM+AD+V+AL M+AQ SP + +++ P A
Sbjct: 11 DSDERHIMRIMPLGAGNEVGRSCIILKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLVTHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVAKVEIIDFHQEKTHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVESVIRRGGRCLIPVFALGRTQELLLILDEHWQAHPDLHNIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAVSNPFLFDHISNLKSMDDFDDSGPCVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIVAMDGRVLPMNCTVEYISFSAHADFVGTSGFVEKLVPPNIVLVHGEKNEMMRLKSALNKKF--HDPKT--YRPNIFTPANMQEIVLEFKGEKIAKAIGKMASEQPQQGKVI-SGLLVEHDSFTHLMEEEDLPLYTKLVSGKITQRQHIPFVQQSFHVLETFIRQMYD---DVVINDEM-------------------------------------------------GKARLIIDKK---VVITHFSSE----KILLEWTTEPIADMIADSVVALTMQAQASPASFKVSKHPIAA 611
BLAST of NO26G00790 vs. NCBI_GenBank
Match: XP_024571869.1 (cleavage and polyadenylation specificity factor subunit 3 [Plasmopara halstedii] >CEG35500.1 cleavage and polyadenylation specificity factor subunit 3 [Plasmopara halstedii]) HSP 1 Score: 564.7 bits (1454), Expect = 5.400e-157 Identity = 310/698 (44.41%), Postives = 419/698 (60.03%), Query Frame = 0
Query: 18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVPCCA----HRRGGKKGGRELDE 711
++ + ITPLGA EVGRSC++LK+KG+TIMLDCG+HPG +G SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK FKGR+F THPTKA+M++ML++ +R + + + +Y + DL C+ K+E+IDF Q M H GI+F YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P +PD+LIVESTYGVQ H ERE RFT +V +VRRGGRCL+PVFALGR QEL+LILDE+W +H DLQ +P+YFAS + KA RVY+TY+NMMN +R+Q+ + NPF+F I N +S+ D DD P+VV+ASPG L SG SRQLF+RWCS N ++ GY EGTLA+K+L+ P + L GR P+ +VE ISFSAH D+ F++++ IVLVHGE+N+M LK AL++ ++P Y I TP I L K A+ +G LA + G + +LV T L+ DL YT+L G ++QK H PF + S + L FL +++E +HL K E + V+ L +G + + W P ADM+AD+V+ALAM AQ SP + +++ P A H R +DE
Sbjct: 12 DERHIMRITPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALMKKF--NDPKV--YHPTISTPANMQEIVLEFKGEKIAKAIGGLASDQPKNG-TVISGLLVEVDSQTHLMAKEDLSAYTKLISGKITQKQHVPFEYNSFDVLITFLCQMYE----------------DVVHL----------------------------------------KNENRLVVCKQVVITRCLVTKGATEKLIVEWTSAPTADMIADSVVALAMHAQASPASFKLSGQPTAACPHDHTRQPSNFDESVDE 631
BLAST of NO26G00790 vs. NCBI_GenBank
Match: ETP33735.1 (hypothetical protein F442_17788 [Phytophthora parasitica P10297]) HSP 1 Score: 563.9 bits (1452), Expect = 9.300e-157 Identity = 308/695 (44.32%), Postives = 419/695 (60.29%), Query Frame = 0
Query: 18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAHRRGGKKGGRELD 710
++ + I PLGA EVGRSC++LK+KG+TIMLDCG+HPG +G SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK FKGR+F THPTKA+M++ML++ +R + + + +Y + DL C+ K+E+IDF Q M H GI+F YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P +PD+LIVESTYGVQ H ERE RFT +V +VRRGGRCL+PVFALGR QEL+LILDE+W +H DLQ +P+YFAS + KA RVY+TY+NMMN +R+Q+ + NPF+F I N +S+ D DD P+VV+ASPG L SG SRQLF+RWCS N ++ GY EGTLA+K+L+ P + L GR P+ +VE ISFSAH D+ F++++ IVLVHGE+N+M LK AL + ++P Y +I TP I L K A+ +G LA + G + +LV T L+ DL TYT+L G ++QK H PF + S + L F+ +++E +HL +KE + VV +G + + W P ADM+AD+V+ALAM AQ SP + ++++ P C H K + D
Sbjct: 12 DERHIMRIMPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKF--NDPKV--YHPSISTPANMQEIVLEFKGEKIAKAIGGLASDQPKNG-TVISGLLVEVDSQTHLMDKEDLSTYTKLISGTITQKQHVPFEYNSFDVLITFIRQMYE----------------DVVHL----------------------------------------EKENRVVVCKQVVVTRCAVAKGATEKLVVEWTSAPTADMIADSVIALAMHAQASPASFKLSNQPTAACPHDHSKKTEANDKD 628
BLAST of NO26G00790 vs. NCBI_GenBank
Match: XP_002905073.1 (cleavage and polyadenylation specificity factor subunit 3 [Phytophthora infestans T30-4] >EEY53455.1 cleavage and polyadenylation specificity factor subunit 3 [Phytophthora infestans T30-4]) HSP 1 Score: 563.9 bits (1452), Expect = 9.300e-157 Identity = 307/688 (44.62%), Postives = 418/688 (60.76%), Query Frame = 0
Query: 18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAHRRGGK 703
++ + I PLGA EVGRSC++LK+KG+TIMLDCG+HPG +G SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK FKGR+F THPTKA+M++ML++ +R + + + +Y + DL C+ K+E+IDF Q M H GI+F YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P +PD+LIVESTYGVQ H ERE RFT +V +VRRGGRCL+PVFALGR QEL+LILDE+W +H DLQ +P+YFAS + KA RVY+TY+NMMN +R+Q+ + NPF+F I N +S+ D DD P+VV+ASPG L SG SRQLF+RWCS N ++ GY EGTLA+K+L+ P + L GR P+ +VE ISFSAH D+ F++++ IVLVHGE+N+M LK AL + ++P Y +I TP I L K A+ +G LA + G + +LV T L+ DL TYT+L G ++QK H PF + S + L F+ +++E +HL +KE A+ VV +G + + W P ADM+AD+++ALAM AQ SP + ++++ P C H K
Sbjct: 12 DERHIMRIMPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKF--NDPKV--YHPSISTPANMQEIVLEFKGEKIAKAIGGLASNQPKNG-TIISGLLVEVDSQTHLMDKEDLSTYTKLISGTITQKQHVPFEYNSFDVLITFIRQMYE----------------DVVHL----------------------------------------EKENRVAVCKQVVVTRCAVAKGATEKLVVEWTSAPTADMIADSLIALAMHAQASPASFKLSNQPTAACPHDHSKK 621
BLAST of NO26G00790 vs. NCBI_GenBank
Match: GAX15257.1 (cleavage and polyadenylation specificity factor subunit 3 [Fistulifera solaris]) HSP 1 Score: 563.9 bits (1452), Expect = 9.300e-157 Identity = 305/679 (44.92%), Postives = 421/679 (62.00%), Query Frame = 0
Query: 20 EETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDS-GPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRS--VGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQA-LFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPFHQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVPC 695
E+ + +TPLGA +EVGRSC +L+++G TIMLD GIHPG G + LPF D PD ID++L++HFHLDHAASLPY TE+ FKGRIF THPTK+++RL+L +++R + + E LYTEA+L +C++KIE+ID+ + G+ F NAGHVLGA MF +E+GG VLYTGDYSME DRHLMAAE+P Q PD+LIVESTYGVQ H + ERE RFT V ++V RGGRCL+PVFALGRAQEL+LILDEYW A+ LQK+P+Y+AS + +A RVY+TY NMMNA +R QMD+ NPF F FI+N +S V + DD P+VV ASPG L SG SRQLFDRW + NG+++ GY E TLA++++ P+ V L GR QPL V+ +SFSAHVD+ QN F+ +V + I+LVHG++++M LK ALV + ++ I P ++L +R++A+++G LA EP + + ++V+ SF++++++P DL TYT LR G +S K+H PF + TL FL E++ G + E E S+++ L G K V + GV + + W+ P D++AD+V+AL + AQ S ++R+TS PC
Sbjct: 2 EDIMSLTPLGAGQEVGRSCHVLEFRGMTIMLDIGIHPGYDGMNGLPFLDRIEPD--QIDVLLVTHFHLDHAASLPYLTERTN---FKGRIFMTHPTKSVLRLLLGDYLRL---------LQMNNAKAEDVLYTEAELQSCINKIELIDYHTTVTVGGLSFHALNAGHVLGACMFWMELGGRSVLYTGDYSMEQDRHLMAAEIPDQ-KPDLLIVESTYGVQAHTSRPEREARFTGTVERVVTRGGRCLIPVFALGRAQELLLILDEYWQANPHLQKIPIYYASKLASRALRVYQTYANMMNARIRAQMDISNPFSFRFIQNLKSIDVHNFDDSGPSVVFASPGMLQSGVSRQLFDRWAADPKNGVLIAGYAVEHTLAKEIMAQPKEVVSLEGRRQPLNCLVDYVSFSAHVDFVQNRSFITQVAPRHIILVHGQKDEMGRLKSALVHMYKQYPENK---RPTITMPPNLQEVKLKFARRRSAKVMGTLANREDEPQEGEKVEGIMVTNSFSSKIVSPDDLATYTPLRLGSISSKLHVPFCGAATTLELFLNEMYHG--VKKYETEGIEGSITNFELQ--------------------------------------GGKVSVTIGQSAGVAI-------------VEWEASPAGDVIADSVVALLLHAQSSSASIRLTSKPC 609
BLAST of NO26G00790 vs. NCBI_GenBank
Match: ETI35792.1 (hypothetical protein F443_17940 [Phytophthora parasitica P1569]) HSP 1 Score: 563.1 bits (1450), Expect = 1.600e-156 Identity = 307/688 (44.62%), Postives = 417/688 (60.61%), Query Frame = 0
Query: 18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAHRRGGK 703
++ + I PLGA EVGRSC++LK+KG+TIMLDCG+HPG +G SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK FKGR+F THPTKA+M++ML++ +R + + + +Y + DL C+ K+E+IDF Q M H GI+F YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P +PD+LIVESTYGVQ H ERE RFT +V +VRRGGRCL+PVFALGR QEL+LILDE+W +H DLQ +P+YFAS + KA RVY+TY+NMMN +R+Q+ + NPF+F I N +S+ D DD P+VV+ASPG L SG SRQLF+RWCS N ++ GY EGTLA+K+L+ P + L GR P+ +VE ISFSAH D+ F++++ IVLVHGE+N+M LK AL + ++P Y +I TP I L K A+ +G LA + G + +LV T L+ DL TYT+L G ++QK H PF + S + L F+ +++E +HL +KE + VV +G + + W P ADM+AD+V+ALAM AQ SP + ++++ P C H K
Sbjct: 12 DERHIMRIMPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKF--NDPKV--YHPSISTPANMQEIVLEFKGEKIAKAIGGLASDQPKNG-TVISGLLVEVDSQTHLMDKEDLSTYTKLISGTITQKQHVPFEYNSFDVLITFIRQMYE----------------DVVHL----------------------------------------EKENRVVVCKQVVVTRCAVAKGATEKLVVEWTSAPTADMIADSVIALAMHAQASPASFKLSNQPTAACPHDHSKK 621
BLAST of NO26G00790 vs. NCBI_GenBank
Match: XP_008896459.1 (hypothetical protein PPTG_04321 [Phytophthora parasitica INRA-310] >ETK76032.1 hypothetical protein L915_17463 [Phytophthora parasitica] >ETL29471.1 hypothetical protein L916_17355 [Phytophthora parasitica] >ETL82692.1 hypothetical protein L917_17188 [Phytophthora parasitica] >ETN18849.1 hypothetical protein PPTG_04321 [Phytophthora parasitica INRA-310] >ETP05617.1 hypothetical protein F441_17810 [Phytophthora parasitica CJ01A1] >KUF75915.1 Cleavage and polyadenylation specificity factor subunit 3 [Phytophthora nicotianae]) HSP 1 Score: 563.1 bits (1450), Expect = 1.600e-156 Identity = 307/688 (44.62%), Postives = 417/688 (60.61%), Query Frame = 0
Query: 18 EDEETVYITPLGAAKEVGRSCLILKYKGRTIMLDCGIHPGRTGDDSLPFFDSGPDAADIDLILISHFHLDHAASLPYFTEKVQGGAFKGRIFATHPTKAIMRLMLQNHIRTDTVRLAADGTTPDEGQQEAPLYTEADLLACLDKIEVIDFQQRMEHRGIRFWCYNAGHVLGAAMFMIEIGGLRVLYTGDYSMEDDRHLMAAEVPYQYTPDILIVESTYGVQNHPPKEERERRFTDEVAKIVRRGGRCLLPVFALGRAQELMLILDEYWHAHKDLQKVPVYFASYTSEKAHRVYETYVNMMNAHVRQQMDLVNPFRFAFIKNCRSVGDIDDFQPAVVLASPGFLNSGPSRQLFDRWCSSDANGLVMTGYTQEGTLARKLLTHPEVVEDLRGRPQPLKASVESISFSAHVDYRQNEEFMKRVKSQIIVLVHGEQNQMNELKRALVRTIGSHNPSQGGYGANILTPDLCSNIQLTIPQRKTARILGKLAEAPLEPGQALFDAVLVSRSFTTRLLTPADLPTYTQLRPGGVSQKVHFPF-HQSKETLRAFLEELFEGGIEELVEEEAAFPSLSSLHLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEREGGKKEGVCALRINGVVVFHLDRRGGGGRGCLVWDGGPVADMVADAVLALAMEAQVSPMALRMTSVP--CCAHRRGGK 703
++ + I PLGA EVGRSC++LK+KG+TIMLDCG+HPG +G SLPFFD G +A +IDL+LI+HFH+DH A+LP+FTEK FKGR+F THPTKA+M++ML++ +R + + + +Y + DL C+ K+E+IDF Q M H GI+F YNAGHVLGA M++IEIGG++VLYTGDYS+E+DRHLMAAE+P +PD+LIVESTYGVQ H ERE RFT +V +VRRGGRCL+PVFALGR QEL+LILDE+W +H DLQ +P+YFAS + KA RVY+TY+NMMN +R+Q+ + NPF+F I N +S+ D DD P+VV+ASPG L SG SRQLF+RWCS N ++ GY EGTLA+K+L+ P + L GR P+ +VE ISFSAH D+ F++++ IVLVHGE+N+M LK AL + ++P Y +I TP I L K A+ +G LA + G + +LV T L+ DL TYT+L G ++QK H PF + S + L F+ +++E +HL +KE + VV +G + + W P ADM+AD+V+ALAM AQ SP + ++++ P C H K
Sbjct: 12 DERHIMRIMPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPFFD-GVEAEEIDLLLITHFHIDHVAALPHFTEKTN---FKGRVFMTHPTKAVMQMMLRDFLRVSNISV------------DDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVLYTGDYSLENDRHLMAAELP-ACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKF--NDPKV--YHPSISTPANMQEIVLEFKGEKIAKAIGGLASDQPKNG-TVISGLLVEVDSQTHLMDKEDLSTYTKLISGTITQKQHVPFEYNSFDVLITFIRQMYE----------------DVVHL----------------------------------------EKENRVVVCKQVVVTRCAVAKGATEKLVVEWTSAPTADMIADSVIALAMHAQASPASFKLSNQPTAACPHDHSKK 621 The following BLAST results are available for this feature:
BLAST of NO26G00790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00790 ID=NO26G00790|Name=NO26G00790|organism=Nannochloropsis oceanica|type=gene|length=4165bpback to top protein sequence of NO26G00790.1 >NO26G00790.1-protein ID=NO26G00790.1-protein|Name=NO26G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=949bpback to top protein sequence of NO26G00790.2 >NO26G00790.2-protein ID=NO26G00790.2-protein|Name=NO26G00790.2|organism=Nannochloropsis oceanica|type=polypeptide|length=833bpback to top Synonyms
Publications
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