NO26G00700, NO26G00700 (gene) Nannochloropsis oceanica

Overview
NameNO26G00700
Unique NameNO26G00700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1455
Alignment locationchr26:242964..244418 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:242964..244418 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO26G00700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00700.1NO26G00700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|568201gene_7890Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00700.1NO26G00700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00700 ID=NO26G00700|Name=NO26G00700|organism=Nannochloropsis oceanica|type=gene|length=1455bp
TGGCAAGGAAATCAATGGCTGTACCAAACTAGGTATATGGCTGCTTGCTT
GCAAATGGTAAGGGTCTAATGGTGTGGTACATTCAGCCTCGATGATATGC
CTCCCGCCCGCTTTTTTCCTCTTCCCAAGGATCAATGCGAAGGAAGCATA
GGAGAGGTCAATATCTTTCCTTCCCGTGTCTCCTGCTGTAAACGCTCATC
ACTTCTATAGCTTGGCCCGAAGACAACGACTTAACCACACATACAGATAG
CACAAGAGATTTCCAATAAGACGTCTTTCCTCCAGAGCGATCCTGTGAAG
TTGCACCGAGAAGGAGTTCTTCAAAGTCGTGGCGACATGCCTGAAGTTTT
ATGTTTTTTGACTCCGAGCCGCTCTCGGCGCATCGTCGAGGATCTTCCCG
ATAGATTTTTGCTGCCTAAATTGATCGCTTGCATTGATTGGTCAACGCCA
ATTTACTTTGCAGGTGGCTCACTCCCTCGACATATTTTCTGACTATCTTC
CCCGCCGGCAGACAAGAAGGAAGAAAAGTAAAACGAATCTTGTGTCAAAA
AAGGCAGAGCCACGGGTTACGCCCGCATGATCGGACAGACACTTGTCCTA
GATTTTTAAGGCAAGGCGCTCCATCAGGGAGCAAGGATGTCGATGATCCG
TCCAAGATGTAGGCTTAGCATCATTTGTGCTGTGGCCTGGCCTCCCGCAG
TCCTCACGGTTGAAGCCCACCCCAAAAAAATGAGTCAATGACTTCAACTT
GAGTAACAGTGTTTTAGCAGTAAATTAGAACTTTGGCGGCCCGGTCATGG
GCGGTGTCGGACGGCAGCTTGGAACCCAGGGCAGAAAGATGAAAAAGATG
AACCAACTAGGCCAGGTGGAAGGCGCGCAGCTTCATATCACGATCTTGTC
AGCCTTCTCGGTCTTAATGATGGTCGTGGTCATCTTATTGAGTGGCTCAG
GCTTGGACATGATGACGGAGTGTCAGGTTGTGGGGCTTGTGTTGTGGATG
GGGAAGTGGAGGGGGGACCGTGAGCGACGTGCGCGGATTCAAAACGGTGC
GGCGGTGGCGACGCGCCCGCCTGCAGCACAAGCAGCCCGCCCGCAGCATG
AGCAAAGCACCATTGTCAGCTGGGCTGCGCGTGATCACATTTTGGTTTTC
CACAAATGAAAGAGAGCAGCCATCACGTGTCTAGGGCACATACTCTCTCG
CTCATCCCGTGTGTGCAAATGGCCGCTGTTGTCTCTTCAGCACGCGTGCA
AACTTTGATCAAAGGACACAATTTAATGACGTGAGCTCTTGTACAGTGGG
TGACAAGAATTTGAAAAGAAGCCAACAAGCAAGACAAGTCACAATGCCCC
CACTCAAGAACAACTGGAGACGACCACGTTGGCTATGTTCGGTTGAAAAT
CGGCGGGTTTTCAATTTATGTCGACATCCCTGCCCCGGTTCGTGGGTCAC
TATGG
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protein sequence of NO26G00700.1

>NO26G00700.1-protein ID=NO26G00700.1-protein|Name=NO26G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=121bp
MGGVGRQLGTQGRKMKKMNQLGQVEGAQLHITILSAFSVLMMVVVILLSG
SGLDMMTECQVVGLVLWMGKWRGDRERRARIQNGAAVATRPPAAQAARPQ
HEQSTIVSWAARDHILVFHK*
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Synonyms
Publications