NO26G00670, NO26G00670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00670 vs. NCBI_GenBank
Match: CBN74466.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 142.9 bits (359), Expect = 4.400e-30 Identity = 129/397 (32.49%), Postives = 175/397 (44.08%), Query Frame = 0 Query: 369 LPFGGLLLPPPLSLALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSS-------HFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPLLPSLPAPVLVGTAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLGVDPKLDPPVVVRGGGREGRGGGVEEGRAVSVPKGISHRYIAVPDEDVQGKLLAVRAYLIERQPRRPLLFVPQQQYVQTGGIEGEEGGRKEGGAAAGASVSEVVSRLGRLMRGTEWEGRVKALHEEMGF 759 L FG L+L P S LL AGI+ PT IQ+ I+ G V++H TGSGKTL FLLP A+A + +S P QL++ PTRELAVQV R V LL G G V LL++ + L + AP++VG+AKVL + K+ T RE + ++ +V+DEVDR + L ++A KE +++ RH +P L+E V+ G R G P R + R +G P G R G AV +P I H + + D D +L + A + E QPRRPL+FVP Q+ V+ VV+ L R G R ALHE MGF Sbjct: 324 LDFGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAAAASAGVNGERASDKAGGGVSHAPWQLLLALPTRELAVQVAREVV-LLSG------GLTASVELLVDANTFHD---LSKVTAPIVVGSAKVLERRIRKSRPT-------VREDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALLERVLAANGEAQCR---------KPRAQGHP--RRLLRVVGPKP----------GHRSG---------AVVIPDTIRHYCVPLGDGDFFSRLEGLTAAVRELQPRRPLIFVPPQE-----------------------RVTAVVAHLRR--AGGAVGARAVALHEAMGF 648
BLAST of NO26G00670 vs. NCBI_GenBank
Match: CEL97128.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 139.8 bits (351), Expect = 3.700e-29 Identity = 106/316 (33.54%), Postives = 162/316 (51.27%), Query Frame = 0 Query: 403 IMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDL---LRGKGERED-GKEGQVALLIEESREGAPPLLPSLPAPVLVGTAKVLWSEMVKANGTSSQTRAGER---EGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLGVDPKLDPPVVVRGGGREGRGGGVEE---GRAVSVPKGISHRYIAVPDEDVQGKLLAVRAYLIERQPRRPLLFVPQQQYVQT 709 I+ G VL+H ETGSGKTLAFLLP + A + ++ P + +++ PTRELA+Q+ + + +L L G + + V L+I++ L P +VGTA L + + SSQ R ++N+R L++DEVDR +SPLG+YATL++K+ + +HP+PA ++ + V+ VQ + ASATIGRPLRRE+A +GV V +GG R VEE RAV VP I H ++ + + + K+ + A L +P RPL+F+ V++ Sbjct: 4 ILSGEDVLLHSETGSGKTLAFLLP-----------LMVRRLAQARRARGAARERAPMETLVIAPTRELAIQLAQEILELEGALTGSRSNDPLQRPDLVHLVIDDENLPLERTLLRTSCPYVVGTATSLLRALRYDSTASSQHHHLARVKPHRLLQNVRHLIMDEVDRLVSPLGRYATLRDKEVRKKHPRPATVIAQAVLET----SRHLRQSVQLIAASATIGRPLRRELANMMGVRD------VDKGGPLLIRPFEVEEYLHSRAVGVPDTIEHFFLPLTNNTLGAKVNGLVAALRTLKPSRPLIFLAPHHSVRS 298
BLAST of NO26G00670 vs. NCBI_GenBank
Match: GAX21048.1 (hypothetical protein FisN_1Lh280 [Fistulifera solaris]) HSP 1 Score: 131.3 bits (329), Expect = 1.300e-26 Identity = 107/328 (32.62%), Postives = 156/328 (47.56%), Query Frame = 0 Query: 368 LLPFGGLLLPPPLSLALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPL----LPSLPAPVLVGTAKVLWSEMV-KANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLGVDPKLDPPVVVRGGGREGRGGGVEEGRAVSVPKGISHRYIAVPDEDVQGKLLAVRAYLIE 691 L+ F GL L P AL RA P+ IQ A P++ RG ++H ETGSGKTLAFLLP A +++ PTRELA Q+ + + L R + L+ + S+E P+ L + P + +G+AK + + + TR E +++N+R +V+DEVDR L+ A EK+ K H KPA ++ V R G+VQ V ASAT+GRPLRRE+AR LG+ P+ PPVV G G V RAV++P +++ Y+ G++L +I+ Sbjct: 162 LIDFAGLKLSPVAGDALGRAKFIKPSPIQAAAIPRLSRGESCILHAETGSGKTLAFLLPLTEYLWTQGQDRDSFA-------------------VVMAPTRELASQIAGIAAVLAPPGTIRFISRPAD--LMADGSKERGVPIDVDELGTKPR-LFIGSAKTIMHSLYGDGKMPAPPTRKPEAMEFLKNVRCIVMDEVDRMLAVQKSRA---EKQYKKIHEKPAAVVCSAVTR-------LTLGRVQIVAASATVGRPLRRELARVLGLPPQECPPVVCASDATGGAGKDVATTRAVTIPDSVTN-YVVPTAGSSPGQVLTAAYQVIQ 456
BLAST of NO26G00670 vs. NCBI_GenBank
Match: GAX12347.1 (hypothetical protein FisN_1Hh280 [Fistulifera solaris]) HSP 1 Score: 128.6 bits (322), Expect = 8.500e-26 Identity = 105/328 (32.01%), Postives = 156/328 (47.56%), Query Frame = 0 Query: 368 LLPFGGLLLPPPLSLALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPL----LPSLPAPVLVGTAKVLWSEMV-KANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLGVDPKLDPPVVVRGGGREGRGGGVEEGRAVSVPKGISHRYIAVPDEDVQGKLLAVRAYLIE 691 L+ F GL L AL RA P+ IQ A PQ++RG ++H ETGSGKTLAFLLP A +++ PTRELA Q+ + + L R + L+ + ++E P+ L + P + +G+AK + + + TR E +++N+R +V+DEVDR L+ A EK+ K H KPA ++ V R G+VQ V ASAT+GRPLRRE+AR LG+ P+ PPV+ G G G RAV++P +++ Y+ G++L +I+ Sbjct: 168 LINFAGLKLSTVAGDALGRAKFFKPSPIQAAAIPQLVRGESCILHAETGSGKTLAFLLPLTEYLWTQGQDRDSFA-------------------VVMAPTRELASQIAGIAAVLAPPGTVRFISR--PTDLMADGAKERGVPIDVDELGTKPR-LFIGSAKTIMHSLYGDGKMPAPPTRKPEAMEFLKNVRCIVMDEVDRMLAVQKSRA---EKQYKKIHEKPAAVVCAAVTR-------LTLGRVQIVAASATVGRPLRRELARVLGLPPQECPPVICAGDGTGDAGQDAATTRAVTIPDSVTN-YVVPTAGSSPGQVLTAAYQVIQ 462
BLAST of NO26G00670 vs. NCBI_GenBank
Match: XP_005822812.1 (hypothetical protein GUITHDRAFT_117980 [Guillardia theta CCMP2712] >EKX35832.1 hypothetical protein GUITHDRAFT_117980 [Guillardia theta CCMP2712]) HSP 1 Score: 102.1 bits (253), Expect = 8.500e-18 Identity = 77/257 (29.96%), Postives = 122/257 (47.47%), Query Frame = 0 Query: 371 FGGLLLPPPLSLALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPLLPSLPAPVLVGTAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVAR 628 F GL+ P + L G+S+P IQ A P IM G V++ TGSGKTLA+L+P + G+ P + +IV PTRELA+Q ++S+ +R +G G + + E E + P+++ T S + + + + NL +V+DEVD+ L+PL ++A LK+ K + HP P L+++ +++ R +Q V SATI R LR+E+AR Sbjct: 131 FAGLMCTPQVHEKLQAIGVSTPLPIQHVAIPSIMSGRSVIVQSPTGSGKTLAYLMP-----------LFARFEEGSKPR----------RGLIVAPTRELALQ---ILSECVRYRG----AGFGMMIVGGTERFEDQLDKMMKTTCPIVICTPDRYQSILATIRDKD------QLQQLLGNLEVMVLDEVDKLLNPLNKHAPLKKVKMRKAHPMPTSLMMQRILQHH----NRRSLPLQIVSCSATISRSLRQELAR 349
BLAST of NO26G00670 vs. NCBI_GenBank
Match: EWM23105.1 (hypothetical protein Naga_100643g3, partial [Nannochloropsis gaditana]) HSP 1 Score: 95.9 bits (237), Expect = 6.100e-16 Identity = 70/206 (33.98%), Postives = 102/206 (49.51%), Query Frame = 0 Query: 64 LPSSARSPSLLPRPTTRLSVDFNT-LPR---PDAATALAAATGTGNDNLPDRLPIVAIIGHPGSGQTTFASMLAEDYPKLHYISTSSEPGLLNEVRTILRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILLDGWPRSMTDLKTLEDGGREGG-EARSVYVDACVFLDSGEEKEDRELVLLRE 265 L +S + L+P P+T LS +T +P P A + A+ ++P P+VAI+G PGSGQ+TF+ +L +D+P L +S+SSEPG+L +VR I + +LLD WPRS+ + K +E G+EGG E R+ ++ACVFLD+GEE ED +L LRE Sbjct: 22 LVTSPCTAFLVPSPSTPLSAPRDTHVPHCLAPIVAATKSEASHASGTHVP---PMVAIVGQPGSGQSTFSRLLLQDFPSLRLVSSSSEPGVLQDVRAIFQ--------------AAAEDTHPPSHPITFPQALSQVLASRIDVLSRGPTPPPLLLDAWPRSVEEWKVVE--GQEGGREGRAYRLNACVFLDTGEETEDADLRDLRE 208
BLAST of NO26G00670 vs. NCBI_GenBank
Match: XP_005780747.1 (hypothetical protein EMIHUDRAFT_463070 [Emiliania huxleyi CCMP1516] >EOD28318.1 hypothetical protein EMIHUDRAFT_463070 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 95.5 bits (236), Expect = 8.000e-16 Identity = 90/309 (29.13%), Postives = 127/309 (41.10%), Query Frame = 0 Query: 372 GGLLLPPPLSLALLRA-GISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVAL-------------LIEESREGAPPLLPSLPAPVLVG------------------------------------TAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLG 631 G ++LPP L L A G+ S +Q A P + G L+H ETG+GKTL F LP A+A A SSP++ +++ PT EL Q V++ LL G E L ++ A LLP+ AP G T+ ++R+ E G + +LR LV+DE D L LG+YAT ++K+ + RHPKPA L+V+ + G +Q +GASAT+GRPLRRE+ G Sbjct: 61 GEVVLPPSLEERLSSALGVRSLNPLQRLALPHALGGGDTLVHAETGAGKTLCFALPIAASL----------AAADGAASSPAACDG-SVHALVLSPTLELCAQTAAVLNALLPGCAAVVATDEAARLLSXXXXXXXLAGARVLVSPASLALALLPASEAPAGGGRRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVRSRSLEPGGLLGSLRLLVLDEADALLGTLGKYATQRQKESRSRHPKPAALVVKSLF-TAAASRPPSSGTLQLLGASATVGRPLRRELQALSG 357
BLAST of NO26G00670 vs. NCBI_GenBank
Match: XP_005769478.1 (hypothetical protein EMIHUDRAFT_470341 [Emiliania huxleyi CCMP1516] >EOD17049.1 hypothetical protein EMIHUDRAFT_470341 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 94.7 bits (234), Expect = 1.400e-15 Identity = 91/312 (29.17%), Postives = 127/312 (40.71%), Query Frame = 0 Query: 369 LPFGGLLLPPPLSLALLRA-GISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVAL-------------LIEESREGAPPLLPSLPAPVLVG------------------------------------TAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLG 631 L G + LPP L L A G+ S +Q A P + G L+H ETG+GKTL F LP A+A A SSP++ +++ PT EL Q V++ LL G E L ++ A LLP+ AP G T+ ++R+ E G + +LR LV+DE D L LG+YAT ++K+ + RHPKPA L+V+ + G +Q +GASAT+GRPLRRE+ G Sbjct: 59 LASGEVALPPSLEERLSSALGVRSLNPLQRLALPHALGGGDTLVHAETGAGKTLCFALPIAASL----------AAADGAASSPAACDG-SVHALVLSPTLELCAQTAAVLNALLPGCAAVVATDEAARLLSXXXXXXXLAGARVLVSPASLALALLPASEAPAGGGRRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVRSRSLEPGGLLGSLRLLVLDEADALLGTLGKYATQRQKESRSRHPKPAALVVKSLF-TAAASRPPSSGTLQLLGASATVGRPLRRELQALSG 358
BLAST of NO26G00670 vs. NCBI_GenBank
Match: XP_020610817.1 (uncharacterized protein LOC110049368 [Orbicella faveolata]) HSP 1 Score: 87.8 bits (216), Expect = 1.700e-13 Identity = 96/341 (28.15%), Postives = 150/341 (43.99%), Query Frame = 0 Query: 368 LLPFGGLLLPPPLSLALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPLLPSLPAPVLVGTAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLGVDPKLDPPVVVRGGGREGRGGGVEEGRAVSVPKGISHRYIAVPDEDVQGKLLAVRAYLIERQPRRPLLFVPQQQYVQT 709 ++ F L P L L R GI+ PT+IQ++A P I + +LI ETGSGKTL FLLP A P + +I+ PTRELA Q+ LL K E G I+ S++ A +++GTAK + E+V + + Q + + +VIDEVD+ L PL + K+ + HP+PA LLVE++++ +Q +GASAT+ L+ ++ LG D V++ EG+ +VP I H+Y+ K A+ ++ + L+F+ + Q V + Sbjct: 185 IVSFQDFDLHPKLVEKLNRDGITMPTAIQKQAIPLIFKRKSLLIQSETGSGKTLVFLLP--------------------ALQFPGKAF----GTVIIVPTRELASQLLFETRRLLGDKTIVESFVSG-----IDLSKQEARLKDNKRKPLIVIGTAKKI-LEIVDKDPSLVQ-----------HTKTIVIDEVDKVLLPLHRKTPFKKLTHRENHPRPAKLLVEKILKTS------KVKPIQLIGASATVNDELKEDLIE-LGWG---DHVTVIQSPSLEGKHR--------NVPPCIKHQYVICDHSLGITKAEALARIFMDSGQKSALVFIHRLQSVDS 466
BLAST of NO26G00670 vs. NCBI_GenBank
Match: XP_001748307.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ86762.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 85.5 bits (210), Expect = 8.300e-13 Identity = 76/250 (30.40%), Postives = 114/250 (45.60%), Query Frame = 0 Query: 383 ALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPLLPSLPAPVLVGTAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVM--RREGRGGGRDG-----GKVQFVGASATIGRPLRREV 626 AL R GI T +Q A +I G VLI ETG+GKTLA+LLP A + ++ F Q++I+ PTRELAVQV ++ +LL+ + GK + A L+G K L ER +++ + ++DEVD L PL A+ ++K ++ +HP+PA +++ V R RD VQ VGASAT+G+ ++RE+ Sbjct: 192 ALARLGIHRATDVQRRAVSKIAEGVDVLITSETGTGKTLAYLLP--------------------ALARVIANDFRAHQVLILVPTRELAVQVYQLTHELLKDVRGIKAGK------------------AINCLARGLLGENKQL----------------SERHPFLQEIDMCILDEVDHLLDPLSSTASQRQKMRRQKHPRPASQVLDRVYFGREVKYTEERDDLEPLRRTVQLVGASATLGQRVKREL 387 The following BLAST results are available for this feature:
BLAST of NO26G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00670 ID=NO26G00670|Name=NO26G00670|organism=Nannochloropsis oceanica|type=gene|length=4361bpback to top protein sequence of NO26G00670.1 >NO26G00670.1-protein ID=NO26G00670.1-protein|Name=NO26G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=809bpback to top Synonyms
Publications
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