NO26G00670, NO26G00670 (gene) Nannochloropsis oceanica

Overview
NameNO26G00670
Unique NameNO26G00670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4361
Alignment locationchr26:238187..242547 +

Link to JBrowse

Properties
Property NameValue
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:238187..242547 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0005524ATP binding
GO:0004386helicase activity
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR011545DEAD/DEAH_box_helicase_dom
IPR003593AAA+_ATPase
IPR014001Helicase_ATP-bd
Homology
BLAST of NO26G00670 vs. NCBI_GenBank
Match: CBN74466.1 (DEAD box helicase [Ectocarpus siliculosus])

HSP 1 Score: 142.9 bits (359), Expect = 4.400e-30
Identity = 129/397 (32.49%), Postives = 175/397 (44.08%), Query Frame = 0
Query:  369 LPFGGLLLPPPLSLALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSS-------HFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPLLPSLPAPVLVGTAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLGVDPKLDPPVVVRGGGREGRGGGVEEGRAVSVPKGISHRYIAVPDEDVQGKLLAVRAYLIERQPRRPLLFVPQQQYVQTGGIEGEEGGRKEGGAAAGASVSEVVSRLGRLMRGTEWEGRVKALHEEMGF 759
            L FG L+L  P S  LL AGI+ PT IQ+     I+ G  V++H  TGSGKTL FLLP               A+A    +   +S          P QL++  PTRELAVQV R V  LL G      G    V LL++ +       L  + AP++VG+AKVL   + K+  T        RE  +  ++ +V+DEVDR +  L ++A  KE +++ RH +P   L+E V+   G    R              G P  R + R +G  P          G R G         AV +P  I H  + + D D   +L  + A + E QPRRPL+FVP Q+                        V+ VV+ L R   G     R  ALHE MGF
Sbjct:  324 LDFGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAAAASAGVNGERASDKAGGGVSHAPWQLLLALPTRELAVQVAREVV-LLSG------GLTASVELLVDANTFHD---LSKVTAPIVVGSAKVLERRIRKSRPT-------VREDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALLERVLAANGEAQCR---------KPRAQGHP--RRLLRVVGPKP----------GHRSG---------AVVIPDTIRHYCVPLGDGDFFSRLEGLTAAVRELQPRRPLIFVPPQE-----------------------RVTAVVAHLRR--AGGAVGARAVALHEAMGF 648          
BLAST of NO26G00670 vs. NCBI_GenBank
Match: CEL97128.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 139.8 bits (351), Expect = 3.700e-29
Identity = 106/316 (33.54%), Postives = 162/316 (51.27%), Query Frame = 0
Query:  403 IMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDL---LRGKGERED-GKEGQVALLIEESREGAPPLLPSLPAPVLVGTAKVLWSEMVKANGTSSQTRAGER---EGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLGVDPKLDPPVVVRGGGREGRGGGVEE---GRAVSVPKGISHRYIAVPDEDVQGKLLAVRAYLIERQPRRPLLFVPQQQYVQT 709
            I+ G  VL+H ETGSGKTLAFLLP              +  A    +  ++    P + +++ PTRELA+Q+ + + +L   L G    +   +   V L+I++        L     P +VGTA  L   +   +  SSQ     R      ++N+R L++DEVDR +SPLG+YATL++K+ + +HP+PA ++ + V+             VQ + ASATIGRPLRRE+A  +GV        V +GG    R   VEE    RAV VP  I H ++ + +  +  K+  + A L   +P RPL+F+     V++
Sbjct:    4 ILSGEDVLLHSETGSGKTLAFLLP-----------LMVRRLAQARRARGAARERAPMETLVIAPTRELAIQLAQEILELEGALTGSRSNDPLQRPDLVHLVIDDENLPLERTLLRTSCPYVVGTATSLLRALRYDSTASSQHHHLARVKPHRLLQNVRHLIMDEVDRLVSPLGRYATLRDKEVRKKHPRPATVIAQAVLET----SRHLRQSVQLIAASATIGRPLRRELANMMGVRD------VDKGGPLLIRPFEVEEYLHSRAVGVPDTIEHFFLPLTNNTLGAKVNGLVAALRTLKPSRPLIFLAPHHSVRS 298          
BLAST of NO26G00670 vs. NCBI_GenBank
Match: GAX21048.1 (hypothetical protein FisN_1Lh280 [Fistulifera solaris])

HSP 1 Score: 131.3 bits (329), Expect = 1.300e-26
Identity = 107/328 (32.62%), Postives = 156/328 (47.56%), Query Frame = 0
Query:  368 LLPFGGLLLPPPLSLALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPL----LPSLPAPVLVGTAKVLWSEMV-KANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLGVDPKLDPPVVVRGGGREGRGGGVEEGRAVSVPKGISHRYIAVPDEDVQGKLLAVRAYLIE 691
            L+ F GL L P    AL RA    P+ IQ  A P++ RG   ++H ETGSGKTLAFLLP               A                   +++ PTRELA Q+  + + L      R   +     L+ + S+E   P+    L + P  + +G+AK +   +       +  TR  E   +++N+R +V+DEVDR L+     A   EK+ K  H KPA ++   V R          G+VQ V ASAT+GRPLRRE+AR LG+ P+  PPVV       G G  V   RAV++P  +++ Y+        G++L     +I+
Sbjct:  162 LIDFAGLKLSPVAGDALGRAKFIKPSPIQAAAIPRLSRGESCILHAETGSGKTLAFLLPLTEYLWTQGQDRDSFA-------------------VVMAPTRELASQIAGIAAVLAPPGTIRFISRPAD--LMADGSKERGVPIDVDELGTKPR-LFIGSAKTIMHSLYGDGKMPAPPTRKPEAMEFLKNVRCIVMDEVDRMLAVQKSRA---EKQYKKIHEKPAAVVCSAVTR-------LTLGRVQIVAASATVGRPLRRELARVLGLPPQECPPVVCASDATGGAGKDVATTRAVTIPDSVTN-YVVPTAGSSPGQVLTAAYQVIQ 456          
BLAST of NO26G00670 vs. NCBI_GenBank
Match: GAX12347.1 (hypothetical protein FisN_1Hh280 [Fistulifera solaris])

HSP 1 Score: 128.6 bits (322), Expect = 8.500e-26
Identity = 105/328 (32.01%), Postives = 156/328 (47.56%), Query Frame = 0
Query:  368 LLPFGGLLLPPPLSLALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPL----LPSLPAPVLVGTAKVLWSEMV-KANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLGVDPKLDPPVVVRGGGREGRGGGVEEGRAVSVPKGISHRYIAVPDEDVQGKLLAVRAYLIE 691
            L+ F GL L      AL RA    P+ IQ  A PQ++RG   ++H ETGSGKTLAFLLP               A                   +++ PTRELA Q+  + + L      R   +     L+ + ++E   P+    L + P  + +G+AK +   +       +  TR  E   +++N+R +V+DEVDR L+     A   EK+ K  H KPA ++   V R          G+VQ V ASAT+GRPLRRE+AR LG+ P+  PPV+  G G    G      RAV++P  +++ Y+        G++L     +I+
Sbjct:  168 LINFAGLKLSTVAGDALGRAKFFKPSPIQAAAIPQLVRGESCILHAETGSGKTLAFLLPLTEYLWTQGQDRDSFA-------------------VVMAPTRELASQIAGIAAVLAPPGTVRFISR--PTDLMADGAKERGVPIDVDELGTKPR-LFIGSAKTIMHSLYGDGKMPAPPTRKPEAMEFLKNVRCIVMDEVDRMLAVQKSRA---EKQYKKIHEKPAAVVCAAVTR-------LTLGRVQIVAASATVGRPLRRELARVLGLPPQECPPVICAGDGTGDAGQDAATTRAVTIPDSVTN-YVVPTAGSSPGQVLTAAYQVIQ 462          
BLAST of NO26G00670 vs. NCBI_GenBank
Match: XP_005822812.1 (hypothetical protein GUITHDRAFT_117980 [Guillardia theta CCMP2712] >EKX35832.1 hypothetical protein GUITHDRAFT_117980 [Guillardia theta CCMP2712])

HSP 1 Score: 102.1 bits (253), Expect = 8.500e-18
Identity = 77/257 (29.96%), Postives = 122/257 (47.47%), Query Frame = 0
Query:  371 FGGLLLPPPLSLALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPLLPSLPAPVLVGTAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVAR 628
            F GL+  P +   L   G+S+P  IQ  A P IM G  V++   TGSGKTLA+L+P              +   G+ P           + +IV PTRELA+Q   ++S+ +R +G       G + +   E  E     +     P+++ T     S +             + +  + NL  +V+DEVD+ L+PL ++A LK+ K +  HP P  L+++ +++       R    +Q V  SATI R LR+E+AR
Sbjct:  131 FAGLMCTPQVHEKLQAIGVSTPLPIQHVAIPSIMSGRSVIVQSPTGSGKTLAYLMP-----------LFARFEEGSKPR----------RGLIVAPTRELALQ---ILSECVRYRG----AGFGMMIVGGTERFEDQLDKMMKTTCPIVICTPDRYQSILATIRDKD------QLQQLLGNLEVMVLDEVDKLLNPLNKHAPLKKVKMRKAHPMPTSLMMQRILQHH----NRRSLPLQIVSCSATISRSLRQELAR 349          
BLAST of NO26G00670 vs. NCBI_GenBank
Match: EWM23105.1 (hypothetical protein Naga_100643g3, partial [Nannochloropsis gaditana])

HSP 1 Score: 95.9 bits (237), Expect = 6.100e-16
Identity = 70/206 (33.98%), Postives = 102/206 (49.51%), Query Frame = 0
Query:   64 LPSSARSPSLLPRPTTRLSVDFNT-LPR---PDAATALAAATGTGNDNLPDRLPIVAIIGHPGSGQTTFASMLAEDYPKLHYISTSSEPGLLNEVRTILRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILLDGWPRSMTDLKTLEDGGREGG-EARSVYVDACVFLDSGEEKEDRELVLLRE 265
            L +S  +  L+P P+T LS   +T +P    P  A   + A+     ++P   P+VAI+G PGSGQ+TF+ +L +D+P L  +S+SSEPG+L +VR I +                                                    +LLD WPRS+ + K +E  G+EGG E R+  ++ACVFLD+GEE ED +L  LRE
Sbjct:   22 LVTSPCTAFLVPSPSTPLSAPRDTHVPHCLAPIVAATKSEASHASGTHVP---PMVAIVGQPGSGQSTFSRLLLQDFPSLRLVSSSSEPGVLQDVRAIFQ--------------AAAEDTHPPSHPITFPQALSQVLASRIDVLSRGPTPPPLLLDAWPRSVEEWKVVE--GQEGGREGRAYRLNACVFLDTGEETEDADLRDLRE 208          
BLAST of NO26G00670 vs. NCBI_GenBank
Match: XP_005780747.1 (hypothetical protein EMIHUDRAFT_463070 [Emiliania huxleyi CCMP1516] >EOD28318.1 hypothetical protein EMIHUDRAFT_463070 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 95.5 bits (236), Expect = 8.000e-16
Identity = 90/309 (29.13%), Postives = 127/309 (41.10%), Query Frame = 0
Query:  372 GGLLLPPPLSLALLRA-GISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVAL-------------LIEESREGAPPLLPSLPAPVLVG------------------------------------TAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLG 631
            G ++LPP L   L  A G+ S   +Q  A P  + G   L+H ETG+GKTL F LP               A+A  A SSP++        +++ PT EL  Q   V++ LL G        E    L             ++      A  LLP+  AP   G                                                  T+ ++R+ E  G + +LR LV+DE D  L  LG+YAT ++K+ + RHPKPA L+V+ +            G +Q +GASAT+GRPLRRE+    G
Sbjct:   61 GEVVLPPSLEERLSSALGVRSLNPLQRLALPHALGGGDTLVHAETGAGKTLCFALPIAASL----------AAADGAASSPAACDG-SVHALVLSPTLELCAQTAAVLNALLPGCAAVVATDEAARLLSXXXXXXXLAGARVLVSPASLALALLPASEAPAGGGRRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVRSRSLEPGGLLGSLRLLVLDEADALLGTLGKYATQRQKESRSRHPKPAALVVKSLF-TAAASRPPSSGTLQLLGASATVGRPLRRELQALSG 357          
BLAST of NO26G00670 vs. NCBI_GenBank
Match: XP_005769478.1 (hypothetical protein EMIHUDRAFT_470341 [Emiliania huxleyi CCMP1516] >EOD17049.1 hypothetical protein EMIHUDRAFT_470341 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 94.7 bits (234), Expect = 1.400e-15
Identity = 91/312 (29.17%), Postives = 127/312 (40.71%), Query Frame = 0
Query:  369 LPFGGLLLPPPLSLALLRA-GISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVAL-------------LIEESREGAPPLLPSLPAPVLVG------------------------------------TAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLG 631
            L  G + LPP L   L  A G+ S   +Q  A P  + G   L+H ETG+GKTL F LP               A+A  A SSP++        +++ PT EL  Q   V++ LL G        E    L             ++      A  LLP+  AP   G                                                  T+ ++R+ E  G + +LR LV+DE D  L  LG+YAT ++K+ + RHPKPA L+V+ +            G +Q +GASAT+GRPLRRE+    G
Sbjct:   59 LASGEVALPPSLEERLSSALGVRSLNPLQRLALPHALGGGDTLVHAETGAGKTLCFALPIAASL----------AAADGAASSPAACDG-SVHALVLSPTLELCAQTAAVLNALLPGCAAVVATDEAARLLSXXXXXXXLAGARVLVSPASLALALLPASEAPAGGGRRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVRSRSLEPGGLLGSLRLLVLDEADALLGTLGKYATQRQKESRSRHPKPAALVVKSLF-TAAASRPPSSGTLQLLGASATVGRPLRRELQALSG 358          
BLAST of NO26G00670 vs. NCBI_GenBank
Match: XP_020610817.1 (uncharacterized protein LOC110049368 [Orbicella faveolata])

HSP 1 Score: 87.8 bits (216), Expect = 1.700e-13
Identity = 96/341 (28.15%), Postives = 150/341 (43.99%), Query Frame = 0
Query:  368 LLPFGGLLLPPPLSLALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPLLPSLPAPVLVGTAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRGGGRDGGKVQFVGASATIGRPLRREVARCLGVDPKLDPPVVVRGGGREGRGGGVEEGRAVSVPKGISHRYIAVPDEDVQGKLLAVRAYLIERQPRRPLLFVPQQQYVQT 709
            ++ F    L P L   L R GI+ PT+IQ++A P I +   +LI  ETGSGKTL FLLP                    A   P  +       +I+ PTRELA Q+      LL  K   E    G     I+ S++ A          +++GTAK +  E+V  + +  Q           + + +VIDEVD+ L PL +    K+   +  HP+PA LLVE++++            +Q +GASAT+   L+ ++   LG     D   V++    EG+          +VP  I H+Y+         K  A+    ++   +  L+F+ + Q V +
Sbjct:  185 IVSFQDFDLHPKLVEKLNRDGITMPTAIQKQAIPLIFKRKSLLIQSETGSGKTLVFLLP--------------------ALQFPGKAF----GTVIIVPTRELASQLLFETRRLLGDKTIVESFVSG-----IDLSKQEARLKDNKRKPLIVIGTAKKI-LEIVDKDPSLVQ-----------HTKTIVIDEVDKVLLPLHRKTPFKKLTHRENHPRPAKLLVEKILKTS------KVKPIQLIGASATVNDELKEDLIE-LGWG---DHVTVIQSPSLEGKHR--------NVPPCIKHQYVICDHSLGITKAEALARIFMDSGQKSALVFIHRLQSVDS 466          
BLAST of NO26G00670 vs. NCBI_GenBank
Match: XP_001748307.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ86762.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 85.5 bits (210), Expect = 8.300e-13
Identity = 76/250 (30.40%), Postives = 114/250 (45.60%), Query Frame = 0
Query:  383 ALLRAGISSPTSIQEEAFPQIMRGHHVLIHDETGSGKTLAFLLPXXXXXXXXXXXXXXKASAGTAPSSPSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLIEESREGAPPLLPSLPAPVLVGTAKVLWSEMVKANGTSSQTRAGEREGWMRNLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVM--RREGRGGGRDG-----GKVQFVGASATIGRPLRREV 626
            AL R GI   T +Q  A  +I  G  VLI  ETG+GKTLA+LLP                    A +   ++ F   Q++I+ PTRELAVQV ++  +LL+     + GK                    +  A  L+G  K L                 ER  +++ +   ++DEVD  L PL   A+ ++K ++ +HP+PA  +++ V   R       RD        VQ VGASAT+G+ ++RE+
Sbjct:  192 ALARLGIHRATDVQRRAVSKIAEGVDVLITSETGTGKTLAYLLP--------------------ALARVIANDFRAHQVLILVPTRELAVQVYQLTHELLKDVRGIKAGK------------------AINCLARGLLGENKQL----------------SERHPFLQEIDMCILDEVDHLLDPLSSTASQRQKMRRQKHPRPASQVLDRVYFGREVKYTEERDDLEPLRRTVQLVGASATLGQRVKREL 387          
The following BLAST results are available for this feature:
BLAST of NO26G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN74466.14.400e-3032.49DEAD box helicase [Ectocarpus siliculosus][more]
CEL97128.13.700e-2933.54unnamed protein product [Vitrella brassicaformis C... [more]
GAX21048.11.300e-2632.62hypothetical protein FisN_1Lh280 [Fistulifera sola... [more]
GAX12347.18.500e-2632.01hypothetical protein FisN_1Hh280 [Fistulifera sola... [more]
XP_005822812.18.500e-1829.96hypothetical protein GUITHDRAFT_117980 [Guillardia... [more]
EWM23105.16.100e-1633.98hypothetical protein Naga_100643g3, partial [Nanno... [more]
XP_005780747.18.000e-1629.13hypothetical protein EMIHUDRAFT_463070 [Emiliania ... [more]
XP_005769478.11.400e-1529.17hypothetical protein EMIHUDRAFT_470341 [Emiliania ... [more]
XP_020610817.11.700e-1328.15uncharacterized protein LOC110049368 [Orbicella fa... [more]
XP_001748307.18.300e-1330.40hypothetical protein [Monosiga brevicollis MX1] >E... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006006NSK006006Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00670.1NO26G00670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00670.1NO26G00670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00670 ID=NO26G00670|Name=NO26G00670|organism=Nannochloropsis oceanica|type=gene|length=4361bp
CCTTTCATTGTGTGCGTCCAGCCAACTCTAGGTACACAGTGAAATGCGTT
TCTTTTTTTTAAAACATGTATTTTCTCTCCATTTCCCTCTTATCAACCAT
TACCCCTTCATCACCATTTCCATTATAGCCGTGTCCTCCATGTCCTTTTC
GGTTCGCTCCCTCACCTAGCTACCCCTTGTCAGCTCCGGGGCAACCACAT
GCCCTTTATTTGTCGCCGCAGCTGCCGGGCTGCGACCTTTCCTCCGCCCA
CACGTTTGCTCCCAATCCCTCCCCCTCCTCCCAAGAAAAAAACAAATTAT
GCGTCCTTTCCGGTCTTTTTTCTTCTTTTCAATTAAATACCGATAATTTC
ATCAATCATTTATCTTATCGATCAATTATTTTAAGATTATTTCATGACTA
CCCGTGCCACAGCCGAGAAATCCTTCTCGCCCTCCCCCTGCTCCAACGCC
GTCACGTAGTCCCTGTTCGCCGCCGCAGCTGTTGGCACCGACGCCCCCAC
TTTCTCAGCAAGCGTCAAGGCAAACGCCAAATCTTTCTGCGCATGTTTCA
AGGGGAAATTGACCTCGTGGTCGTCCGCTATGATCTTAGGACCCTTGAGG
TTGAACATGGGATTGGTCATCGCGCCAAGCGACAGGACCTTTACCACATC
CTCTGTGGACAAATTCGCTTTTTGAGCCAGGGCAAGGCCTTCGGAGAGGG
AGGACATCATCGTAGCCATTATCATGTTAACGACCAGTTTCATCTCAGTC
CCTTTTCCGGTATCGCCCAGGAAGAAACTTGCTTTCCCCATAGCATCTAA
ATAAGGCACGGCTTCTTTAAACACTCCCTCATTCCCTCCCGTCAAAAACA
CCAACTGGCCCGTTTCTGCCGGTACCTTACTCCCACTCACGGGCGCCTCT
AGAAAACTCCCGCCCTTGGCTTTGACGGCAATGTCGAATGCCTGCATGTC
CTTGACTTCCAACGTGGCACAATCTATTAGTTTAGACCCTTTTTGGATCC
CTGCAAGAATACCTTCAGGGGCGTCAAAGACCTCCCTTGCCGCTGCAGGA
GTCGAAAGCATCGAGAATGTCAACCCCTCTCCAACCTCTTCAAGAACTTG
TTTGGGATTTTTTGCGATGCGGACGCGTATACGGTCGGTCGTAGGGGGGT
ATTCTGACAAAAGTTTCTCGCTTTTCTCCACGCTTCGATTCCAGACTATG
ACATCGTCTCCTTTTTCCAGGAGGCGACGGACCATCCCCGCGCCCATGTA
TCCTAAGCCAATAAAGCCTACTTTTTTGGAGGACGAGAGGGGCAAGGACG
AGGACGAGGAGGCGAGGGCACGGAAGGTTTGCCTCTGTCGCTGGTGGAGC
TGGAGGCGGGAGAGGGAGGGGAAGGTGGGGGAGGGTGTGCGGAAGGCAAA
GGCGGTGGTGAGCTGGAGGACGAGCATGGTGCTGAAAATGACGAGCAGAG
AAATGGGCGAGAAGGACAATGGCGGCATTTGCCTGTAGTGTTTGTGTTGC
GAGGGTGTGCGTGAGCAGCTGGAGAGAAGGGCAGCAGGAGGAGGAGGCTC
TATAGGATGATAGGCTCTATAGGATGATATGACGATGAGAAGCCGAGGCG
TGATCAGGCCGAGGAAAGAAAAGGAGGACGAGGACAAGTGTTGCCTGAGC
TATAAACCTGTATGCTCATACTGGTGGTGTGCTCGATGTTGGTGTGGTAA
GGTTTGGCGTTTGCATGTCTTGTTGTGCGGCCGCTGGCGCAACGAGAGCG
GCAAGAAGCCCTGTTGCACTGCAACTTCTCACTCTATCCTATATACACAC
AGCAATGCCAACGCCGGACACATCCCCACCAAGAAGAAGATTGCAAAATA
GTCTCCGCCTTATCCTCCTCAGCCTGACGACGATCAGTAACCTGGCCTTC
CTCTTGCCCTCCTCAGCGCGCTCCCCCAGCCTCCTCCCTCGGCCCACCAC
ACGTTTATCGGTTGACTTCAACACGCTACCTCGCCCTGATGCTGCCACTG
CTCTTGCTGCGGCTACAGGGACAGGCAATGACAATCTACCGGACAGACTG
CCTATTGTGGCCATAATTGGCCACCCCGGCTCGGGTCAGACAACTTTTGC
CAGgtattttttgcaggcccgagataagaaagccccccgctccctccctc
cctccccccctccctccatctgggcatatatttgtatccattgtcgacat
atttaatgcgtaacacaggtagatgtcatcgatactttgcttgtttatgc
tctgcactgctccacttaccatcgtcatcctccccttcctccctccctcc
ctccctccctccctgcccctcagTATGCTCGCTGAAGACTACCCCAAACT
TCACTACATCTCCACCAGCAGCGAACCAGGTCTCCTCAATGAAGTCCGCA
CAATTCTTCGACAAGCAGCAGAAAAAGCAGCAGCAGCACAAGCAGACCCC
TCCCTCCCTCCTTCCCTCCCCCTCTCCCTTCCCGAAGCCATGTCCCATGC
CTTGGCCTCACGGATTCGCTCGGTCCTTGCCCTCCCTCCCTCCCTCCCTC
CCCCCCTCCCTTCCGCCATCCTTCTGGACGGGTGGCCCCGTTCGATGACC
GATCTAAAAACTTTGGAGGATGGGGGGAGGGAGGGAGGGGAGGCAAGGTC
GGTGTATGTGGATGCCTGTGTCTTTCTTGATAGTGGCGAAGAGAAAGAGG
ACCGGGAGCTGGTCTTGCTGAGGGAGGGGTTGAAGGAGGGGGGAAGGGAG
AGAGGGAGGGCGTGGGTGATACCTAATGACGGGGAGGTGGGCGAGGTTTA
CAAGAAGGTGAAGGAGGTCTTGGCGCCTGTATTGGCGAAGGGCGGGTTGA
GGGAGGGAGGGAAGGAGGGAGGGAAGGAGGTTGTACAATCCGAATCACCT
GCAGAGGCAGCAGGAGTAGCAGCAGCAGCAGCAGCAGCAATAAGAACAAA
AGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACAGCAGCTGCAGCAG
CAACAGCCAAAACAAAACCCGCCTCCTCTTCCTCCCTCCTCCCATTCGGA
GGCCTCCTTCTTCCCCCTCCCCTCTCCCTCGCTCTCCTCCGTGCCGGCAT
CTCCTCACCCACCTCTATTCAAGAGGAAGCTTTTCCCCAAATCATGCGAG
GACACCACGTCCTAATCCACGACGAAACCGGGTCTGGCAAAACCCTCGCT
TTCCTCCTCCCCCTCCTCCTTCCCCTCCTCCCTCCCCCCTCCCCCTCGGA
TGAGAAAGCGAGCGCGGGTACTGCCCCTTCCTCCCCCTCCTCCTCCCATT
TCCTACCTTGCCAATTAATGATTGTGTGTCCCACGCGTGAATTAGCCGTC
CAAGTCGGTCGAGTCGTTTCGGACCTTCTGAGAGGGAAGGGCGAGAGGGA
GGATGGGAAGGAAGGGCAGGTCGCCCTGTTGATCGAAGAGAGCAGGGAGG
GAGCTCCACCCCTCCTCCCCTCCCTCCCTGCCCCTGTGTTGGTGGGCACA
GCCAAGGTATTGTGGTCGGAGATGGTAAAGGCGAATGGCACCTCGTCCCA
GACGAGGGCGGGGGAGAGGGAGGGGTGGATGCGGAATCTGCGGGCCTTGG
TGATAGATGAGGTGGACCGGTGTTTGTCGCCCCTGGGGCAATATGCAACG
TTGAAGGAGAAGAAGCAGAAGGGACGGCATCCCAAACCGGCGGTGTTGCT
GGTGGAAGAGGTGATGAGGAGGGAAGGGAGGGGAGGAGGGAGGGACGGAG
GGAAGGTGCAGTTTGTGGGGGCATCGGCAACGATCGGGCGGCCGTTAAGG
AGAGAGGTAGCACGATGCCTTGGAGTGGACCCGAAGCTTGACCCCCCTGT
GGTGGTGCGGGGAGGAGGGAGGGAGGGAAGAGGGGGAGGAGTGGAAGAAG
GAAGGGCGGTGAGTGTGCCCAAAGGGATTTCGCACCGGTATATTGCGGTG
CCTGATGAAGATGTGCAGGGAAAGCTCCTGGCAGTGAGGGCGTATTTGAT
CGAAAGGCAGCCACGGAGGCCCTTGTTATTTGTTCCACAGCAGCAGTATG
TTCAAACAGGGGGAATAGAGGGGGAGGAGGGAGGGAGGAAGGAGGGGGGG
GCGGCGGCGGGCGCGAGTGTGAGTGAGGTGGTGTCACGGTTGGGGAGGTT
AATGAGGGGCACAGAATGGGAAGGGAGGGTGAAGGCTTTGCATGAAGAGA
TGGGGTTTGGAGGAGGAGGAGGAGGAGGAAGGAGGACAGGAGGAAGGGCG
GGGAAACAGGTGGTGGATGGGAGGGGGGGAAGAAGGGGAGGGGGATGGGG
GGGGGGGGAAGGCGCAAGTGGGAGAGGAGGAGGAGAGGGAGGGGAGGAGG
AAGGTCGCTGA
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protein sequence of NO26G00670.1

>NO26G00670.1-protein ID=NO26G00670.1-protein|Name=NO26G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=809bp
MSCCAAAGATRAARSPVALQLLTLSYIHTAMPTPDTSPPRRRLQNSLRLI
LLSLTTISNLAFLLPSSARSPSLLPRPTTRLSVDFNTLPRPDAATALAAA
TGTGNDNLPDRLPIVAIIGHPGSGQTTFASMLAEDYPKLHYISTSSEPGL
LNEVRTILRQAAEKAAAAQADPSLPPSLPLSLPEAMSHALASRIRSVLAL
PPSLPPPLPSAILLDGWPRSMTDLKTLEDGGREGGEARSVYVDACVFLDS
GEEKEDRELVLLREGLKEGGRERGRAWVIPNDGEVGEVYKKVKEVLAPVL
AKGGLREGGKEGGKEVVQSESPAEAAGVAAAAAAAIRTKAAAAAATAATA
TAAAAATAKTKPASSSSLLPFGGLLLPPPLSLALLRAGISSPTSIQEEAF
PQIMRGHHVLIHDETGSGKTLAFLLPLLLPLLPPPSPSDEKASAGTAPSS
PSSSHFLPCQLMIVCPTRELAVQVGRVVSDLLRGKGEREDGKEGQVALLI
EESREGAPPLLPSLPAPVLVGTAKVLWSEMVKANGTSSQTRAGEREGWMR
NLRALVIDEVDRCLSPLGQYATLKEKKQKGRHPKPAVLLVEEVMRREGRG
GGRDGGKVQFVGASATIGRPLRREVARCLGVDPKLDPPVVVRGGGREGRG
GGVEEGRAVSVPKGISHRYIAVPDEDVQGKLLAVRAYLIERQPRRPLLFV
PQQQYVQTGGIEGEEGGRKEGGAAAGASVSEVVSRLGRLMRGTEWEGRVK
ALHEEMGFGGGGGGGRRTGGRAGKQVVDGRGGRRGGGWGGGEGASGRGGG
EGGEEEGR*
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Synonyms
Publications