NO26G00630, NO26G00630 (gene) Nannochloropsis oceanica

Overview
NameNO26G00630
Unique NameNO26G00630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4161
Alignment locationchr26:219461..223621 +

Link to JBrowse

Properties
Property NameValue
DescriptionTbc domain containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:219461..223621 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf
IPR000195Rab-GTPase-TBC_dom
Vocabulary: Biological Process
TermDefinition
GO:0042147retrograde transport, endosome to Golgi
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
Homology
BLAST of NO26G00630 vs. NCBI_GenBank
Match: EWM23100.1 (tbc domain containing protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 368.6 bits (945), Expect = 7.800e-98
Identity = 230/532 (43.23%), Postives = 296/532 (55.64%), Query Frame = 0
Query:    4 SPLPSRLSPFPPSQHAAVTASDE-DRSSLALLRRALDPCSKSPPPSPALVRALCRRLGVIPPDLRRQIWPILLLGKQSRSNDDASQKSSSCSGKNAGEHPTVLASGTESLGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLQQPLPSSSLLHALHTVPLNLPNQRVIEVDALRTRSELSLFKAPDIQIKVQKILTLYCKRQQISYKQGMNEVLAPFVYVMSGGRGEQEVQGGKLDAGARKEQWLKEEVTSDVAIERALSSSLEATAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMDIPPSPLSPRTTETDVMTLQCFTRFLQLFLRNMYTDKDFHCMQASFILFRLLLLYHHPSLSLRLDSNNLPPELYLTPWLLTFFARTLDMQTTLSLWDQYLLENDPLLHHFLLLAFLRQHLPLLLSCPHDVLPETISNLTFSGLIEVKSLIFEAKLIKKDTPESYCRRLYRVCLTDLNPSSLPPLLLELSHVPTVSLTAREVLEGVMDVLSFGE 535
            SP  + +S   P  H+   A    ++ + ALLRRAL P   +PPPSP LVR LC++LG IPPDLRR IWP+LLLG  +   D A+  S+   G +  E     A+    +GP                                      SL  A+  VPL+LPNQRV+E+DALRTRSEL LFK+P  Q  ++++LTLYCK Q ISYKQG+NEVLAPFV V+ G  G  + +G + D              +  A++                                                                PPS          ++  +CF RFL L L N+Y+D+DFH +QA F+LFRLLLLYH P LSLRLD+  LPPELYLTPW+LT  AR+LDM TTL+LWD YLLE DPLLHHFLLLA LR+H   LL+ P D+LPET+++L+FSG   V SL+ EAK ++  TP+SYCRRL RV  T+++ +SL  LLL+L+ VPTV+LTA+E LEGV+DVL +GE
Sbjct:   10 SPASTSVSSSTPPPHSDANAGTRGEQDTEALLRRALPPHRGAPPPSPLLVRTLCQQLGSIPPDLRRDIWPLLLLGPDAYDADVATAPSAIVQGFSGKEEG---ATAGAKVGPHCGNKSSPVDGPSRGLEALCG-----------DDAKPFSLAQAIEDVPLDLPNQRVVEIDALRTRSELPLFKSPGTQAMIERVLTLYCKLQGISYKQGLNEVLAPFVQVVMGREGGCDGEGRRPDRLXXXXXXXXXXXXAGGALQE-------------------------------------------------DGEGDGGDRRGQGCPPS------AAPSLLIYRCFARFLHLLLGNLYSDEDFHLLQALFLLFRLLLLYHCPRLSLRLDACGLPPELYLTPWVLTLLARSLDMPTTLALWDHYLLEQDPLLHHFLLLALLRRHRASLLAAPVDLLPETLASLSFSGTAHVASLVAEAKALRAQTPDSYCRRLARVSRTNVDAASLSALLLDLNAVPTVTLTAQEALEGVLDVLGYGE 472          
BLAST of NO26G00630 vs. NCBI_GenBank
Match: XP_005855943.1 (tbc domain containing protein [Nannochloropsis gaditana CCMP526] >EKU20416.1 tbc domain containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 313.5 bits (802), Expect = 3.000e-81
Identity = 202/481 (42.00%), Postives = 256/481 (53.22%), Query Frame = 0
Query:    4 SPLPSRLSPFPPSQHAAVTASDE-DRSSLALLRRALDPCSKSPPPSPALVRALCRRLGVIPPDLRRQIWPILLLGKQSRSNDDASQKSSSCSGKNAGEHPTVLASGTESLGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLQQPLPSSSLLHALHTVPLNLPNQRVIEVDALRTRSELSLFKAPDIQIKVQKILTLYCKRQQISYKQGMNEVLAPFVYVMSGGRGEQEVQGGKLDAGARKEQWLKEEVTSDVAIERALSSSLEATAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMDIPPSPLSPRTTETDVMTLQCFTRFLQLFLRNMYTDKDFHCMQASFILFRLLLLYHHPSLSLRLDSNNLPPELYLTPWLLTFFARTLDMQTTLSLWDQYLLENDPLLHHFLLLAFLRQHLPLLLSCPHDVLPETISNLTFSGLIEVKSLIFEAKLIKKDTPE 484
            SP P+ +S   P  H+   A    ++ + ALLRRAL P   +PPPSP LVR LC++LG IPPDLRR IWP+LLLG  +   D A+  S+   G +  E     A+    +GP                                      SL  A+  VPL+LPNQRV+E+DALRTRSEL LFK+P  Q  ++++LTLYCK Q ISYKQG+NEVLAPFV V+ G  G  + +G + D    +                AL    E                                                        PPS          ++  +CFTRFL L L N+Y+D+DFH +QA F+LFRLLLLYH P LSLRLD+  LPPELYLTPW+LT  AR+LDM TTL+LWD YLLE DPLLHHFLLLA LR+H   LL+ P D+LPET+++L+FSG   V SL+ EAK ++  TP+
Sbjct:   10 SPAPTSVSSSTPPPHSDANAGTRGEQDTEALLRRALPPHRGAPPPSPLLVRTLCQQLGSIPPDLRRDIWPLLLLGPDAYDADVATAPSAIVQGFSGKEEG---ATAGAKVGPHCGNKSSPVDGPSRGLEALCG-----------DDAKPFSLAQAIEDVPLDLPNQRVVEIDALRTRSELPLFKSPGTQAMIERVLTLYCKLQGISYKQGLNEVLAPFVQVVMGREGGGDGEGRRPD----RLXXXXXXXXXXXXXGGALQEDGEGDGGDRRG---------------------------------------------QGCPPS------AAPSLLIYRCFTRFLHLLLGNLYSDEDFHLLQALFLLFRLLLLYHCPRLSLRLDACGLPPELYLTPWVLTLLARSLDMPTTLALWDHYLLEQDPLLHHFLLLALLRRHRASLLAAPVDLLPETLASLSFSGTAHVASLVAEAKALRAQTPD 421          
BLAST of NO26G00630 vs. NCBI_GenBank
Match: OWZ15845.1 (hypothetical protein PHMEG_00010450 [Phytophthora megakarya])

HSP 1 Score: 153.7 bits (387), Expect = 3.900e-33
Identity = 108/371 (29.11%), Postives = 165/371 (44.47%), Query Frame = 0
Query:  164 NLPNQRVIEVDALRTRSELSLFKAPDIQIKVQKILTLYCKRQQISYKQGMNEVLAPFVYVMSGGRGEQEVQGGKLDAGARKEQWLKEEVTSDVAIERALSSSLEATAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMDIPPSPLSPRTTETDVMTLQCFTRFLQLFLRNMYTDKDFHCMQASFILFRLLLLYHHPSLSLRLDSNNLPPELYLTPWLLTFFARTLDMQTTLSLWDQYLLENDPLLHHFLLLAFLRQHLPLLLSCPHDVLPETISNLTFSGLIEVKSLIFEAKLIKKDTPESYCRRLYRVCLTDLNPSSLPPLLLELSHVPTVSLTAREVLEGVMDVLSFGE 535
            +L NQRVI  DA RTR     FK P+    V K+LT YCK + ++YKQGMNEVLAPF+ +     G ++                                                                                            P PL+      + +  QCF   +  FL +++ DK+F  +Q SF L++LL+LYH P L   LD +++ PELY+TPW +T FAR+L  +    LWD +LLE DP L HF+  A +  +   +L+    +LP+ +S+LTFS   E++ +  +A  I + TP S+ R LY VC       ++ P L +L    ++ +   E++  ++D L+ G+
Sbjct:  117 DLDNQRVIAADAARTRGNEPRFKQPETAELVVKLLTYYCKCRSVTYKQGMNEVLAPFLLLTEQRDGCED--------------------------------------------------------------------------------------------PVPLA------EGVVFQCFYALIDKFLPHVFVDKEFKSLQCSFQLYKLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANREKILAADIAMLPQVLSSLTFSSRDELEQVCVDALAISESTPRSFKRDLYSVCYGGFT-DAMFPFLDQLYACSSLQVYPEELVRNLLDRLATGK 388          
BLAST of NO26G00630 vs. NCBI_GenBank
Match: ETK95984.1 (hypothetical protein L915_01156 [Phytophthora parasitica])

HSP 1 Score: 152.1 bits (383), Expect = 1.100e-32
Identity = 111/379 (29.29%), Postives = 162/379 (42.74%), Query Frame = 0
Query:  153 SLLHALHTVPLNLPNQRVIEVDALRTRSELSLFKAPDIQIKVQKILTLYCKRQQISYKQGMNEVLAPFVYVMSGGRGEQEVQGGKLDAGARKEQWLKEEVTSDVAIERALSSSLEATAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMDIPPSPLSPRTTETDVMTLQCFTRFLQLFLRNMYTDKDFHCMQASFILFRLLLLYHHPSLSLRLDSNNLPPELYLTPWLLTFFARTLDMQTTLSLWDQYLLENDPLLHHFLLLAFLRQHLPLLLSCPHDVLPETISNLTFSGLIEVKSLIFEAKLIKKDTPESYCRRLYRVCLTDLNPSSLPPLLLELSHVPTVSLTAREVLEGVMDVLS 532
            SL  ++  V  +L NQRVI  DA RTR     FK P+    V K+LT YCK + I YKQGMNEVLAPF+ +     G Q+                                                                                                  R    + +  QCF   +  FL +++ DK+F  +Q SF L+RLL+LYH P L   LD +++ PELY+TPW +T FAR+L  +    LWD +LLE DP L HF+  A +  +   +      +LP+ +S+LTFS   E++ +  +A    + TP+SY R LY VC       ++ P L +L    ++ +   E++  +MD L+
Sbjct:  115 SLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQK--------------------------------------------------------------------------------------------------RVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANREKIFDADIAMLPQVLSSLTFSSRDELEQVCADALAFSELTPKSYKRDLYSVCYGGFT-DAMVPFLDQLYACSSLQVYPEELVRNLMDRLA 394          
BLAST of NO26G00630 vs. NCBI_GenBank
Match: ETL49362.1 (hypothetical protein L916_01136 [Phytophthora parasitica])

HSP 1 Score: 152.1 bits (383), Expect = 1.100e-32
Identity = 111/379 (29.29%), Postives = 162/379 (42.74%), Query Frame = 0
Query:  153 SLLHALHTVPLNLPNQRVIEVDALRTRSELSLFKAPDIQIKVQKILTLYCKRQQISYKQGMNEVLAPFVYVMSGGRGEQEVQGGKLDAGARKEQWLKEEVTSDVAIERALSSSLEATAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMDIPPSPLSPRTTETDVMTLQCFTRFLQLFLRNMYTDKDFHCMQASFILFRLLLLYHHPSLSLRLDSNNLPPELYLTPWLLTFFARTLDMQTTLSLWDQYLLENDPLLHHFLLLAFLRQHLPLLLSCPHDVLPETISNLTFSGLIEVKSLIFEAKLIKKDTPESYCRRLYRVCLTDLNPSSLPPLLLELSHVPTVSLTAREVLEGVMDVLS 532
            SL  ++  V  +L NQRVI  DA RTR     FK P+    V K+LT YCK + I YKQGMNEVLAPF+ +     G Q+                                                                                                  R    + +  QCF   +  FL +++ DK+F  +Q SF L+RLL+LYH P L   LD +++ PELY+TPW +T FAR+L  +    LWD +LLE DP L HF+  A +  +   +      +LP+ +S+LTFS   E++ +  +A    + TP+SY R LY VC       ++ P L +L    ++ +   E++  +MD L+
Sbjct:  115 SLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQK--------------------------------------------------------------------------------------------------RVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANREKIFDADIAMLPQVLSSLTFSSRDELEQVCADALAFSELTPKSYKRDLYSVCYGGFT-DAMVPFLDQLYACSSLQVYPEELVRNLMDRLA 394          
BLAST of NO26G00630 vs. NCBI_GenBank
Match: ETM02423.1 (hypothetical protein L917_01106 [Phytophthora parasitica])

HSP 1 Score: 152.1 bits (383), Expect = 1.100e-32
Identity = 111/379 (29.29%), Postives = 162/379 (42.74%), Query Frame = 0
Query:  153 SLLHALHTVPLNLPNQRVIEVDALRTRSELSLFKAPDIQIKVQKILTLYCKRQQISYKQGMNEVLAPFVYVMSGGRGEQEVQGGKLDAGARKEQWLKEEVTSDVAIERALSSSLEATAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMDIPPSPLSPRTTETDVMTLQCFTRFLQLFLRNMYTDKDFHCMQASFILFRLLLLYHHPSLSLRLDSNNLPPELYLTPWLLTFFARTLDMQTTLSLWDQYLLENDPLLHHFLLLAFLRQHLPLLLSCPHDVLPETISNLTFSGLIEVKSLIFEAKLIKKDTPESYCRRLYRVCLTDLNPSSLPPLLLELSHVPTVSLTAREVLEGVMDVLS 532
            SL  ++  V  +L NQRVI  DA RTR     FK P+    V K+LT YCK + I YKQGMNEVLAPF+ +     G Q+                                                                                                  R    + +  QCF   +  FL +++ DK+F  +Q SF L+RLL+LYH P L   LD +++ PELY+TPW +T FAR+L  +    LWD +LLE DP L HF+  A +  +   +      +LP+ +S+LTFS   E++ +  +A    + TP+SY R LY VC       ++ P L +L    ++ +   E++  +MD L+
Sbjct:  115 SLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQK--------------------------------------------------------------------------------------------------RVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANREKIFDADIAMLPQVLSSLTFSSRDELEQVCADALAFSELTPKSYKRDLYSVCYGGFT-DAMVPFLDQLYACSSLQVYPEELVRNLMDRLA 394          
BLAST of NO26G00630 vs. NCBI_GenBank
Match: XP_008890885.1 (hypothetical protein PPTG_01037 [Phytophthora parasitica INRA-310] >ETN24858.1 hypothetical protein PPTG_01037 [Phytophthora parasitica INRA-310])

HSP 1 Score: 152.1 bits (383), Expect = 1.100e-32
Identity = 111/379 (29.29%), Postives = 162/379 (42.74%), Query Frame = 0
Query:  153 SLLHALHTVPLNLPNQRVIEVDALRTRSELSLFKAPDIQIKVQKILTLYCKRQQISYKQGMNEVLAPFVYVMSGGRGEQEVQGGKLDAGARKEQWLKEEVTSDVAIERALSSSLEATAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMDIPPSPLSPRTTETDVMTLQCFTRFLQLFLRNMYTDKDFHCMQASFILFRLLLLYHHPSLSLRLDSNNLPPELYLTPWLLTFFARTLDMQTTLSLWDQYLLENDPLLHHFLLLAFLRQHLPLLLSCPHDVLPETISNLTFSGLIEVKSLIFEAKLIKKDTPESYCRRLYRVCLTDLNPSSLPPLLLELSHVPTVSLTAREVLEGVMDVLS 532
            SL  ++  V  +L NQRVI  DA RTR     FK P+    V K+LT YCK + I YKQGMNEVLAPF+ +     G Q+                                                                                                  R    + +  QCF   +  FL +++ DK+F  +Q SF L+RLL+LYH P L   LD +++ PELY+TPW +T FAR+L  +    LWD +LLE DP L HF+  A +  +   +      +LP+ +S+LTFS   E++ +  +A    + TP+SY R LY VC       ++ P L +L    ++ +   E++  +MD L+
Sbjct:  115 SLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQK--------------------------------------------------------------------------------------------------RVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANREKIFDADIAMLPQVLSSLTFSSRDELEQVCADALAFSELTPKSYKRDLYSVCYGGFT-DAMVPFLDQLYACSSLQVYPEELVRNLMDRLA 394          
BLAST of NO26G00630 vs. NCBI_GenBank
Match: ETO84923.1 (hypothetical protein F444_01225 [Phytophthora parasitica P1976])

HSP 1 Score: 152.1 bits (383), Expect = 1.100e-32
Identity = 111/379 (29.29%), Postives = 162/379 (42.74%), Query Frame = 0
Query:  153 SLLHALHTVPLNLPNQRVIEVDALRTRSELSLFKAPDIQIKVQKILTLYCKRQQISYKQGMNEVLAPFVYVMSGGRGEQEVQGGKLDAGARKEQWLKEEVTSDVAIERALSSSLEATAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMDIPPSPLSPRTTETDVMTLQCFTRFLQLFLRNMYTDKDFHCMQASFILFRLLLLYHHPSLSLRLDSNNLPPELYLTPWLLTFFARTLDMQTTLSLWDQYLLENDPLLHHFLLLAFLRQHLPLLLSCPHDVLPETISNLTFSGLIEVKSLIFEAKLIKKDTPESYCRRLYRVCLTDLNPSSLPPLLLELSHVPTVSLTAREVLEGVMDVLS 532
            SL  ++  V  +L NQRVI  DA RTR     FK P+    V K+LT YCK + I YKQGMNEVLAPF+ +     G Q+                                                                                                  R    + +  QCF   +  FL +++ DK+F  +Q SF L+RLL+LYH P L   LD +++ PELY+TPW +T FAR+L  +    LWD +LLE DP L HF+  A +  +   +      +LP+ +S+LTFS   E++ +  +A    + TP+SY R LY VC       ++ P L +L    ++ +   E++  +MD L+
Sbjct:  115 SLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQK--------------------------------------------------------------------------------------------------RVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANREKIFDADIAMLPQVLSSLTFSSRDELEQVCADALAFSELTPKSYKRDLYSVCYGGFT-DAMVPFLDQLYACSSLQVYPEELVRNLMDRLA 394          
BLAST of NO26G00630 vs. NCBI_GenBank
Match: ETO99702.1 (hypothetical protein F441_22882 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 152.1 bits (383), Expect = 1.100e-32
Identity = 111/379 (29.29%), Postives = 162/379 (42.74%), Query Frame = 0
Query:  153 SLLHALHTVPLNLPNQRVIEVDALRTRSELSLFKAPDIQIKVQKILTLYCKRQQISYKQGMNEVLAPFVYVMSGGRGEQEVQGGKLDAGARKEQWLKEEVTSDVAIERALSSSLEATAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMDIPPSPLSPRTTETDVMTLQCFTRFLQLFLRNMYTDKDFHCMQASFILFRLLLLYHHPSLSLRLDSNNLPPELYLTPWLLTFFARTLDMQTTLSLWDQYLLENDPLLHHFLLLAFLRQHLPLLLSCPHDVLPETISNLTFSGLIEVKSLIFEAKLIKKDTPESYCRRLYRVCLTDLNPSSLPPLLLELSHVPTVSLTAREVLEGVMDVLS 532
            SL  ++  V  +L NQRVI  DA RTR     FK P+    V K+LT YCK + I YKQGMNEVLAPF+ +     G Q+                                                                                                  R    + +  QCF   +  FL +++ DK+F  +Q SF L+RLL+LYH P L   LD +++ PELY+TPW +T FAR+L  +    LWD +LLE DP L HF+  A +  +   +      +LP+ +S+LTFS   E++ +  +A    + TP+SY R LY VC       ++ P L +L    ++ +   E++  +MD L+
Sbjct:  115 SLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQK--------------------------------------------------------------------------------------------------RVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANREKIFDADIAMLPQVLSSLTFSSRDELEQVCADALAFSELTPKSYKRDLYSVCYGGFT-DAMVPFLDQLYACSSLQVYPEELVRNLMDRLA 394          
BLAST of NO26G00630 vs. NCBI_GenBank
Match: ETP54000.1 (hypothetical protein F442_01160 [Phytophthora parasitica P10297])

HSP 1 Score: 152.1 bits (383), Expect = 1.100e-32
Identity = 111/379 (29.29%), Postives = 162/379 (42.74%), Query Frame = 0
Query:  153 SLLHALHTVPLNLPNQRVIEVDALRTRSELSLFKAPDIQIKVQKILTLYCKRQQISYKQGMNEVLAPFVYVMSGGRGEQEVQGGKLDAGARKEQWLKEEVTSDVAIERALSSSLEATAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMDIPPSPLSPRTTETDVMTLQCFTRFLQLFLRNMYTDKDFHCMQASFILFRLLLLYHHPSLSLRLDSNNLPPELYLTPWLLTFFARTLDMQTTLSLWDQYLLENDPLLHHFLLLAFLRQHLPLLLSCPHDVLPETISNLTFSGLIEVKSLIFEAKLIKKDTPESYCRRLYRVCLTDLNPSSLPPLLLELSHVPTVSLTAREVLEGVMDVLS 532
            SL  ++  V  +L NQRVI  DA RTR     FK P+    V K+LT YCK + I YKQGMNEVLAPF+ +     G Q+                                                                                                  R    + +  QCF   +  FL +++ DK+F  +Q SF L+RLL+LYH P L   LD +++ PELY+TPW +T FAR+L  +    LWD +LLE DP L HF+  A +  +   +      +LP+ +S+LTFS   E++ +  +A    + TP+SY R LY VC       ++ P L +L    ++ +   E++  +MD L+
Sbjct:  115 SLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQK--------------------------------------------------------------------------------------------------RVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANREKIFDADIAMLPQVLSSLTFSSRDELEQVCADALAFSELTPKSYKRDLYSVCYGGFT-DAMVPFLDQLYACSSLQVYPEELVRNLMDRLA 394          
The following BLAST results are available for this feature:
BLAST of NO26G00630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23100.17.800e-9843.23tbc domain containing protein, partial [Nannochlor... [more]
XP_005855943.13.000e-8142.00tbc domain containing protein [Nannochloropsis gad... [more]
OWZ15845.13.900e-3329.11hypothetical protein PHMEG_00010450 [Phytophthora ... [more]
ETK95984.11.100e-3229.29hypothetical protein L915_01156 [Phytophthora para... [more]
ETL49362.11.100e-3229.29hypothetical protein L916_01136 [Phytophthora para... [more]
ETM02423.11.100e-3229.29hypothetical protein L917_01106 [Phytophthora para... [more]
XP_008890885.11.100e-3229.29hypothetical protein PPTG_01037 [Phytophthora para... [more]
ETO84923.11.100e-3229.29hypothetical protein F444_01225 [Phytophthora para... [more]
ETO99702.11.100e-3229.29hypothetical protein F441_22882 [Phytophthora para... [more]
ETP54000.11.100e-3229.29hypothetical protein F442_01160 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006016NSK006016Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00630.1NO26G00630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|174531gene_7884Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100755g1gene7350Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00630.1NO26G00630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00630 ID=NO26G00630|Name=NO26G00630|organism=Nannochloropsis oceanica|type=gene|length=4161bp
ACAGATACAAGACGGCGAAGGTGATCTCACCGGCTAGCCGGATGGATGCT
TCCCCACTACCATCACGACTGTCGCCATTCCCCCCATCCCAGCACGCTGC
TGTCACCGCCAGCGACGAAGACCGGTCATCCTTGGCGTTATTGCGCCGGG
CGTTGGACCCTTGCAGCAAAAGCCCCCCTCCCTCCCCTGCTTTGGTCCGA
GCATTGTGTCGGCGCCTAGGAGTCATCCCACCTGACCTCCGGCGGCAAAT
CTGGCCAATTTTACTCTTGGGCAAACAAAGTCGTTCCAACGATGATGCAA
GTCAGAAGAGTAGTAGCTGTAGTGGTAAGAATGCTGGCGAACATCCAACC
GTATTGGCAAGCGGCACGGAGTCTCTCGGACCTCTCCCTTCTCCCTCCAG
CAGCAATGGCATCGGCAGCAACAAAGACAACGACATCACCAGCAGCAGCA
GCAGCAGCAGCAGCGTTGTTCCATTACAGCAACCACTGCCATCTTCGTCC
CTTCTACACGCCCTGCACACGGTCCCTCTCAATTTGCCCAACCAAAGAGT
TATCGAAGTGGACGCCCTGCGAACACGGTCCGAACTTTCTCTGTTTAAGG
CTCCGGATATTCAAATAAAGGTACAGAAGATATTGACGCTTTATTGTAAG
AGACAACAGATCAGTTACAAACAAGGGATGAATGAAGTGCTTGCGCCGTT
TGTGTACGTCATGAGTGGCGGGAGAGGAGAGCAGGAAGTGCAAGGAGGAA
AATTAGACGCCGGGGCTCGGAAAGAGCAATGGTTGAAAGAGGAGGTGACC
AGCGATGTAGCAATAGAAAGAGCACTTTCATCATCCCTAGAAGCAACGGC
AAAAACATCAAAAACATCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGAAACGGCA
GCAGGAGGAGGAGAAGCAGCAGCTGACGACACCAGCAGCAGGGCAACCAT
TATGGACATACCGCCTTCCCCTCTCTCTCCTCGCACCACCGAAACCGACG
TCATGACCCTTCAATGCTTCACTCGCTTCCTCCAACTCTTCCTCCGGAAT
ATGTACACAGATAAGGACTTTCACTGCATGCAGGCCTCCTTCATCCTCTT
CCGTCTCCTCCTCCTCTACCACCACCCCTCCCTCTCCCTCCGCCTCGACT
CTAACAATCTCCCCCCCGAGCTGTATTTAACCCCCTGGCTCCTCACCTTC
TTCGCCCGTACCCTCGACATGCAAACCACACTCTCACTTTGGGACCAATA
CCTACTCGAGAACGACCCCCTCCTCCACCACTTCCTCCTTCTCGCCTTCC
TCCGTCAGCACCTCCCACTCCTCCTCTCCTGCCCTCATGATGTCCTTCCA
GAAACGATATCTAACCTGACCTTCTCTGGGTTAATAGAAGTCAAATCCCT
CATTTTTGAGGCCAAATTAATCAAGAAAGACACACCTGAATCTTATTGTC
GCCGTCTCTACCGTGTGTGTTTGACAGACTTGAACCCTTCCTCGCTCCCG
CCCTTGCTTCTGGAATTAAGCCATGTCCCCACGGTCAGTTTGACTGCGCG
GGAGGTGTTGGAGGGGGTGATGGATGTCTTATCGTTCGGGGAGGAGGAGG
AGGAGGAAGAGGAGGAAGAAGAAGAAGAAGAGGAGAGCGCGGCGGGGGAA
GGGCTGGGGAAGGCAAAGCCGTTGAAGCCCCCAAGGAAAGTAGAGGGAGA
GCATCAGGATGGGGAAAAGGGTGACAGGAAAGAGGAGACAAAAGGAGAAA
AGAAGAAGAGGGGAAAGAGGAAAGAGATGGACGCGAGTGACACGTCGGTG
CGCACACAGAATGAAGCACGGGTGGAAGACCAGGAGGAGCAGGAGGACGA
GGACGAGGAGGAGGAAGGGGAAGAGGGAGCGGAGGACCGCGCGTTGGCAG
GGGCATTCGGCTCTCCCTTTTCACGGTTTGTAGCCGCATCAAAAGCAACA
GCAGGTGCAGCACCAATGGCAGTAACAACAGCAGCAGCTGCAGCTGCCTC
CTTCTTGCACCGACACCACCCCCTCATCCTCCTTGACTGTCGCCCGTGgt
cagaattttcgaaatttcgaatcgagtcttccatgcacctagactcgcga
ctattacccgaaggaagggagaaaggaaagggaggagggcgcacagattc
ccgagggtcgctttcgcatcaagCGAGGGAGGGGGGGGGGAGGAAGGGGA
GTTGGAGGAGTTTCTAAAGGCGGTGTATGCAGCATGGGGCGGGGTGGCCC
ACGTGTGCTTGATCTTTTCTGCTGCAGCTGCTGCAACAACTGCTGCTTCT
GCTTCTTCTCCTCCTCCTCCTCCTCCTCTTCTCTTTTCCTCCTCCTCAGC
ATTCCTCCGTGGCACAAGACCTGGGGCACCGGACGCCTCTTCGTCCACCC
CTTCCTCCCTCCCGCCCTCCTTCCCCCTCCATCCCTCCTCTGTCCCCGCT
CGCTTTCTGCAGGCCCTCTTGTCGTTCGGGTTTCCACGTGTCTCGTTTTT
GCAGGGGGGGATTGAGACGTTCGTTGGATATCTAGAGCAGCAATTGAGGG
AGGCAGGGAGGGCGGGAGGGAGGGGGAGGTATAAGAAGTTGGAGAGGGTT
TTGACGGTGGGTCGACCGGTGAGGAGGGGGAGGGAGGGACAGGAAGAGGG
AGACGAAGAGAAAATGAATTTGTTTCGGAGAATGTTTGGACCAGGTGTAG
TAGGGACGAAAGGAAGGAGGGAGGGAGGAAAGGAGAAGAAGCAGAAGCCG
GGGGCAACGAAGGGGAAAAGGGCGGAAAAGGAGGTTGTAGAGGGAGGGGA
GGGATGGAAGGAGAAGGATGCAGGGGAAGGGGGTATTGAGCCACCGTCCA
GCCTCTTATCCTACTTGATGGCACTGGAAGAAGAGGAAGAACAAGGAAAG
GTTGGAGGAAGGAAAAGAGGGGGGGGGGGGGAGGAACAAAGAAAGCCTCC
CCTTCCCGGCAGCAACACCAGCAGCAGCAAGGGCCAGGTCTCgtatcagc
gttcggaaatctacgctcgtccttcctgtctttcgcagggatgggttcgc
aatttcctatcttgtcctcgcccttcccccctccctcggcgcagctgccg
tcttccccccttcccaacagTACCAGCGGCGGGCCGCCTCCTTGTCTTCG
TGCGCCTCACTCGTCTCTTCCTCTGACTACTGCAGGAGGCGGAGAAGATA
AAGGGGGAGAAGAAGGAGGAGGAGGAGCAGGAGGAGGAGGAGCAGCAGCA
GCAGCAGCAGCAGCAGCGACATCAGCAGGAGCAGGAGCAGGAGCAGGAGG
GAAGGGAGGAGGGGGAGAGCAACAATCTCACCTCCTCGGCCGTTTGATCC
GACGCATCAGCAGTGTCGCTCCTTTTCCTCCTTCCTCTGCGCCCACTCAT
GCTTCGTCTTCCTCCCTCTCGTCTCCTCTCTCCTTTACATCTCCGAGCAC
AGATCAGCAGGCCATGGCACTGGTTGCCTCTGCCCCCCTCCTCTTCCTCC
CGGATTTCATCCTTCCCCCTACCGCCTTCCAAGACCGAGGGATGGAAAGA
CAAGGGCGAAGAAGGGAGGGAGGAAGGGCGGCAGAGTTTAGAGTACACCG
GCAATTGCCTTCGGGGAGGCTGTCTGTGTGTGTGTTGGTGCTGGCGAGAG
GGAAAGTCCTCGTAGGCGTCGACGATCTCACGCGGGACAGGGGCTGGATT
AGGGTTTTGATTGAAAAGGATATTAAAACCTTGACGCAGGTGACCAAGAA
GAAGAAGAGCGCGCATTCGATTCGGATGCATTTTTGTGGGGAGGAAGGGG
AGGAGGGGGAGGGAGGGAGGGAGCGACCGAGGGGATTGTCGCAGTCCTTG
TCGTCGACGATAGGGATGTCAAGTCAAGGGCAAGGAGGGAGGGAGGGAGC
GAGGGAGGGGGCGAGGGAGGTGGTAGAAATTTATTCCACGGAATATTTGA
GTATCGTGGAGGAGTTGAAGAAGATGGTGATGGAGGCCCAGCAAGCGGAG
GATGAGGGCGGGAGGGAGGGAGAGGCGTTTAAGTTGGCGGCAGAAGCACA
GAAGGAGAAAGGAAAGGGGGGAGGATTAGAGGGAGAACGACAGGAAGTCA
TGTCTGTATGA
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protein sequence of NO26G00630.1

>NO26G00630.1-protein ID=NO26G00630.1-protein|Name=NO26G00630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1289bp
MDASPLPSRLSPFPPSQHAAVTASDEDRSSLALLRRALDPCSKSPPPSPA
LVRALCRRLGVIPPDLRRQIWPILLLGKQSRSNDDASQKSSSCSGKNAGE
HPTVLASGTESLGPLPSPSSSNGIGSNKDNDITSSSSSSSSVVPLQQPLP
SSSLLHALHTVPLNLPNQRVIEVDALRTRSELSLFKAPDIQIKVQKILTL
YCKRQQISYKQGMNEVLAPFVYVMSGGRGEQEVQGGKLDAGARKEQWLKE
EVTSDVAIERALSSSLEATAKTSKTSGGGGGGGGGGGGGGGEGGGGGGGG
ETAAGGGEAAADDTSSRATIMDIPPSPLSPRTTETDVMTLQCFTRFLQLF
LRNMYTDKDFHCMQASFILFRLLLLYHHPSLSLRLDSNNLPPELYLTPWL
LTFFARTLDMQTTLSLWDQYLLENDPLLHHFLLLAFLRQHLPLLLSCPHD
VLPETISNLTFSGLIEVKSLIFEAKLIKKDTPESYCRRLYRVCLTDLNPS
SLPPLLLELSHVPTVSLTAREVLEGVMDVLSFGEEEEEEEEEEEEEEESA
AGEGLGKAKPLKPPRKVEGEHQDGEKGDRKEETKGEKKKRGKRKEMDASD
TSVRTQNEARVEDQEEQEDEDEEEEGEEGAEDRALAGAFGSPFSRFVAAS
KATAGAAPMAVTTAAAAAASFLHRHHPLILLDCRPCEGGGGEEGELEEFL
KAVYAAWGGVAHVCLIFSAAAAATTAASASSPPPPPPLLFSSSSAFLRGT
RPGAPDASSSTPSSLPPSFPLHPSSVPARFLQALLSFGFPRVSFLQGGIE
TFVGYLEQQLREAGRAGGRGRYKKLERVLTVGRPVRRGREGQEEGDEEKM
NLFRRMFGPGVVGTKGRREGGKEKKQKPGATKGKRAEKEVVEGGEGWKEK
DAGEGGIEPPSSLLSYLMALEEEEEQGKVGGRKRGGGGEEQRKPPLPGSN
TSSSKGQVSTSGGPPPCLRAPHSSLPLTTAGGGEDKGGEEGGGGAGGGGA
AAAAAAAATSAGAGAGAGGKGGGGEQQSHLLGRLIRRISSVAPFPPSSAP
THASSSSLSSPLSFTSPSTDQQAMALVASAPLLFLPDFILPPTAFQDRGM
ERQGRRREGGRAAEFRVHRQLPSGRLSVCVLVLARGKVLVGVDDLTRDRG
WIRVLIEKDIKTLTQVTKKKKSAHSIRMHFCGEEGEEGEGGRERPRGLSQ
SLSSTIGMSSQGQGGREGAREGAREVVEIYSTEYLSIVEELKKMVMEAQQ
AEDEGGREGEAFKLAAEAQKEKGKGGGLEGERQEVMSV*
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Synonyms
Publications