NO26G00520, NO26G00520 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO26G00520
Unique Name	NO26G00520
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2224
Alignment location	chr26:184961..187184 -

Link to JBrowse

Properties


Property Name	Value
Description	Telomerase cajal body protein 1

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr26	genome	chr26:184961..187184 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR001680	WD40_repeat

Homology

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BLAST of NO26G00520 vs. NCBI_GenBank
Match: EWM23091.1 (telomerase cajal body protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 530.0 bits (1364), Expect = 8.400e-147
Identity = 281/486 (57.82%), Postives = 330/486 (67.90%), Query Frame = 0

Query:   67 PRPLEDGEV-------DVSSPAQVD-----AGAAATAMAALWHLPIPHGLNFEASSGTAVVCESIQTFEGSSNS---KTTGPRIFNNVVKAVRFSPDGTCLLTSSEDHILRVFEVPHHLVYDTPTSFSVTAAAAADPDSNRINSTVNASNGNEWQPCLACPEGETVYDQTWYPLMNARADPLTACFISSSRDHPIHLWDAFTGQIRASYRAYDHMDELASAHSLAFSPFGDKIFAGFERMVRVFDTATPGKDFDERPTRPTKRSRCGGQNGIISTICFSPQDAATGMYVAGSFAGSMALYDYRMKGDALLSWPSPHNGQGITTLRLSYDGRLLFSGARKNDCVHCWDLRKGSLLSSFWRDASSNQRLGIDLDPAGRYMATGCRKGGEEGKRGALVYDLSTGQEVGGLGLMEDTVSDVSFHPYAGLVAAGMGERHFDVEHEDNEEDEMVVEK-------------QKARRRSGVRLFQVPLAGAQKG 525
            P  L +GEV        +SS + ++       A +T     W  P P  L+F+ + G  VV +++Q F           + P    ++VKAVRFSPDGTCLLT+SEDH+LRVFE+PH L+   P              S             EW PCLACPEGE +YDQ WYP M+AR+DPL+ACF+SSSRDHPIHLWDA+TG +RASYRAY+HMDEL SAHSLAF+P GDKIFAGFER++RVFDTA PG+D ++RPTRP KRS   G NGIISTI FSP DAA GM+VAGSF+GSMALYDYRM+GD+LL WP PH GQG+TTLRLSYDGRLLFSGARKN  VHCWDLRKG+LLSSF R+ASSNQRLGIDLDPAGR++ATG R     G+  ALVYDLSTG+EV GLG ++DT SDVSFHPYAGLVA GMGERH++ E                                SGVRLF+VPLA    G
Sbjct:   19 PERLSNGEVAPPSRLPPMSSESSINDTTTSTEATSTIPVDAWQCPPPCDLDFDNTPGPLVVGQALQAFHSDGTGLPPPRSNPGTNQSIVKAVRFSPDGTCLLTASEDHVLRVFELPHDLLLPRP--------------SLXXXXXXXXXXXPEWAPCLACPEGEAIYDQAWYPRMDARSDPLSACFLSSSRDHPIHLWDAYTGGLRASYRAYNHMDELTSAHSLAFTPGGDKIFAGFERILRVFDTARPGRDHEDRPTRPHKRSPERGLNGIISTIAFSPLDAAPGMFVAGSFSGSMALYDYRMRGDSLLLWPDPHQGQGLTTLRLSYDGRLLFSGARKNGHVHCWDLRKGTLLSSFARNASSNQRLGIDLDPAGRFLATGNR-----GEGKALVYDLSTGKEVAGLGPLKDTASDVSFHPYAGLVAVGMGERHWEFESXXXXXXXXXXXXXXXXXXXXXXXGVTSTSWSSGVRLFRVPLAKQSSG 485

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BLAST of NO26G00520 vs. NCBI_GenBank
Match: XP_005855942.1 (telomerase cajal body protein 1, partial [Nannochloropsis gaditana CCMP526] >EKU20415.1 telomerase cajal body protein 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 434.5 bits (1116), Expect = 4.800e-118
Identity = 210/276 (76.09%), Postives = 242/276 (87.68%), Query Frame = 0

Query:  226 MNARADPLTACFISSSRDHPIHLWDAFTGQIRASYRAYDHMDELASAHSLAFSPFGDKIFAGFERMVRVFDTATPGKDFDERPTRPTKRSRCGGQNGIISTICFSPQDAATGMYVAGSFAGSMALYDYRMKGDALLSWPSPHNGQGITTLRLSYDGRLLFSGARKNDCVHCWDLRKGSLLSSFWRDASSNQRLGIDLDPAGRYMATGCRKGGEEGKRGALVYDLSTGQEVGGLGLMEDTVSDVSFHPYAGLVAAGMGERHFDVEHEDNEEDEMVVE 502
            M+AR+DPL+ACF+SSSRDHPIHLWDA+TG +RASYRAY+HMDEL SAHSLAF+P GDKIFAGFER++RVFDTA PG+D ++RPTRP KRS   G NGIISTI FSP DAA GM+VAGSF+GSMALYDYRM+GD+LL WP PH GQG+TTLRLSYDGRLLFSGARKN  VHCWDLRKG+LLSSF R+ASSNQRLGIDLDPAGR++ATG R     G+  ALVYDLSTG+EV GLG ++DT SDVSFHPYAGLVA GMGERH++ E ED+EE+E++ E
Sbjct:    1 MDARSDPLSACFLSSSRDHPIHLWDAYTGGLRASYRAYNHMDELTSAHSLAFTPGGDKIFAGFERILRVFDTARPGRDHEDRPTRPHKRSPERGLNGIISTIAFSPLDAAPGMFVAGSFSGSMALYDYRMRGDSLLLWPDPHQGQGLTTLRLSYDGRLLFSGARKNGHVHCWDLRKGTLLSSFARNASSNQRLGIDLDPAGRFLATGNR-----GEGKALVYDLSTGKEVAGLGPLKDTASDVSFHPYAGLVAVGMGERHWEFESEDDEEEEILGE 271

[Close]

BLAST of NO26G00520 vs. NCBI_GenBank
Match: XP_024573114.1 (Guanine nucleotide-binding protein [Plasmopara halstedii] >CEG36745.1 Guanine nucleotide-binding protein [Plasmopara halstedii])

HSP 1 Score: 287.7 bits (735), Expect = 7.200e-74
Identity = 160/379 (42.22%), Postives = 221/379 (58.31%), Query Frame = 0

Query:  122 FEGSSNSKTTGPRIFNNVVKAVRFSPDGTCLLTSSEDHILRVFEVPHHLVYDTPTSFSVTAAAAADPDSNRINSTVNASNGNEWQPCLACPEGETVYDQTWYPLMNARADPLTACFISSSRDHPIHLWDAFTGQIRASYRAYDHMDELASAHSLAFSPFGDKIFAGFERMVRVFDTATPGKDFDERPTRPTKRSRCGGQNGIISTICFSPQDAATGMYVAGSFAGSMALYDYRMKGDALLSWPSPHNGQGITTLRLSYDGRLLFSGARKNDCVHCWDLR-KGSLLSSFWRDASSNQRLGIDLDPAGRYMATGCRKGGEEGKRGALVYDLSTGQEVGGLGLMEDTVSDVSF--HPYAGLVAAGMGERHFDVEHEDNEEDE 498
            F  S     T P   NN  K V+ SPDG CLLT+S+DH+LR+FEV                        N  +ST            L C EG  +YD  WYP M++ ADP +  F+S+SRD P+HLWDA+TG++RASYRA+DHMDEL SAHSLAF+  G K+FAGF+RM+R FD + P +DF  RP   T+RSR  GQ G+IST+ F+P  +   +Y AGS+AG+  +Y    KG+ LL+    H G+GIT ++ S  GR LF+ AR++  +HCWD+R    +L +F R A +N R+  DL   G+Y+ATG R G        ++YD+ TG  +     + D  + VSF   P   ++A   G+RH+D+  +  +EDE
Sbjct:   30 FTASKEFSFTSPSCSNNFTKGVKVSPDGLCLLTNSDDHVLRLFEV-----------------------CNEFDST----------SLLQCKEGNAIYDFEWYPFMSS-ADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELTSAHSLAFNTTGTKLFAGFDRMIRYFDLSQPSRDFQARPLSKTRRSR-DGQRGLISTLDFNPDHSQ--IYAAGSYAGTTCVYT-EDKGEELLTL-RDHGGRGITQVKFSPCGRFLFTAARQDAQIHCWDIRASNEILHTFNRVADTNLRIEFDLHCGGKYLATGSRSG------CVMLYDVMTGALLNENIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDLPEDMQDEDE 363

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BLAST of NO26G00520 vs. NCBI_GenBank
Match: XP_008908852.1 (hypothetical protein PPTG_13174 [Phytophthora parasitica INRA-310] >ETN05788.1 hypothetical protein PPTG_13174 [Phytophthora parasitica INRA-310])

HSP 1 Score: 286.6 bits (732), Expect = 1.600e-73
Identity = 167/423 (39.48%), Postives = 236/423 (55.79%), Query Frame = 0

Query:  119 IQTFEGSSNSKTTGPRIFNNVVKAVRFSPDGTCLLTSSEDHILRVFEVPHHLVYDTPTSFSVTAAAAADPDSNRINSTVNASNGNEWQPCLACPEGETVYDQTWYPLMNARADPLTACFISSSRDHPIHLWDAFTGQIRASYRAYDHMDELASAHSLAFSPFGDKIFAGFERMVRVFDTATPGKDFDERPTRPTKRSRCGGQNGIISTICFSPQDAATGMYVAGSFAGSMALYDYRMKGDALLSWPSPHNGQGITTLRLSYDGRLLFSGARKNDCVHCWDLR-KGSLLSSFWRDASSNQRLGIDLDPAGRYMATGCRKGGEEGKRGALVYDLSTGQEVGGLGLMEDTVSDVSF--HPYAGLVAAGMGERHFDVEHEDNEEDEMVVE----------KQKARRRSGVRLFQVPLAGAQKGEVGE 529
            +  F  S    +  P   NN  K V+ SPDG CLLT+S+DH+LR+FE+                                 SN ++    L   EG TVYD  WYP M++ ADP +  F+S+SRD P+HLWDA+TG++RASYRA+DHMDELASA SLAF+  G K+FAGF+RM+R FD + P +DF  RP   T+RSR  GQ G+IST+ F+P  +   +Y AGS+AG+  +Y    +G+ LL+    H+G+GI+ ++ S  GR LF+ AR++  +HCWD+R    +L +F R A +N R+  DL   GRY+ATG R G        ++YD+ TG  +     + D  + VSF   P   ++A   G+RH+D+  +  +EDE V +            + R    V  FQ+P   A KG   E
Sbjct:   28 LHRFTASKEFSSASPSCSNNFTKGVKVSPDGLCLLTNSDDHVLRLFEM---------------------------------SNASDSTSLLQAKEGGTVYDYEWYPFMSS-ADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTGTKLFAGFDRMIRFFDLSQPSRDFRARPLSKTRRSR-KGQRGLISTLHFNPDHSK--IYAAGSYAGTTCVYT-EDEGEELLAL-RDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHTFNRVADTNLRIEFDLHCGGRYLATGSRTG------RVMLYDVLTGALLDESIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDLPEDMQDEDEAVADGIDVDMKTAVNSQVRNVLQVYDFQMPQGQAVKGTASE 405

[Close]

BLAST of NO26G00520 vs. NCBI_GenBank
Match: ETI42346.1 (hypothetical protein F443_12517 [Phytophthora parasitica P1569])

HSP 1 Score: 286.2 bits (731), Expect = 2.100e-73
Identity = 167/420 (39.76%), Postives = 235/420 (55.95%), Query Frame = 0

Query:  122 FEGSSNSKTTGPRIFNNVVKAVRFSPDGTCLLTSSEDHILRVFEVPHHLVYDTPTSFSVTAAAAADPDSNRINSTVNASNGNEWQPCLACPEGETVYDQTWYPLMNARADPLTACFISSSRDHPIHLWDAFTGQIRASYRAYDHMDELASAHSLAFSPFGDKIFAGFERMVRVFDTATPGKDFDERPTRPTKRSRCGGQNGIISTICFSPQDAATGMYVAGSFAGSMALYDYRMKGDALLSWPSPHNGQGITTLRLSYDGRLLFSGARKNDCVHCWDLR-KGSLLSSFWRDASSNQRLGIDLDPAGRYMATGCRKGGEEGKRGALVYDLSTGQEVGGLGLMEDTVSDVSF--HPYAGLVAAGMGERHFDVEHEDNEEDEMVVE----------KQKARRRSGVRLFQVPLAGAQKGEVGE 529
            F  S    +  P   NN  K V+ SPDG CLLT+S+DH+LR+FE+                                 SN ++    L   EG TVYD  WYP M++ ADP +  F+S+SRD P+HLWDA+TG++RASYRA+DHMDELASA SLAF+  G K+FAGF+RM+R FD + P +DF  RP   T+RSR  GQ G+IST+ F+P  +   +Y AGS+AG+  +Y    +G+ LL+    H+G+GI+ ++ S  GR LF+ AR++  +HCWD+R    +L +F R A +N R+  DL   GRY+ATG R G        ++YD+ TG  +     + D  + VSF   P   ++A   G+RH+D+  +  +EDE V +            + R    V  FQ+P   A KG   E
Sbjct:   31 FTASKEFSSASPSCSNNFTKGVKVSPDGLCLLTNSDDHVLRLFEM---------------------------------SNASDSTSLLQAKEGGTVYDYEWYPFMSS-ADPNSCIFVSASRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTGTKLFAGFDRMIRFFDLSQPSRDFRARPLSKTRRSR-KGQRGLISTLHFNPDHSK--IYAAGSYAGTTCVYT-EDEGEELLAL-RDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHTFNRVADTNLRIEFDLHCGGRYLATGSRTG------RVMLYDVLTGALLDESIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDLPEDMQDEDEAVADGIDVDMKTTVNSQVRNVLQVYDFQMPQGQAVKGTASE 405

[Close]

BLAST of NO26G00520 vs. NCBI_GenBank
Match: ETK82355.1 (hypothetical protein L915_12241 [Phytophthora parasitica] >ETP12072.1 hypothetical protein F441_12484 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 286.2 bits (731), Expect = 2.100e-73
Identity = 167/420 (39.76%), Postives = 235/420 (55.95%), Query Frame = 0

Query:  122 FEGSSNSKTTGPRIFNNVVKAVRFSPDGTCLLTSSEDHILRVFEVPHHLVYDTPTSFSVTAAAAADPDSNRINSTVNASNGNEWQPCLACPEGETVYDQTWYPLMNARADPLTACFISSSRDHPIHLWDAFTGQIRASYRAYDHMDELASAHSLAFSPFGDKIFAGFERMVRVFDTATPGKDFDERPTRPTKRSRCGGQNGIISTICFSPQDAATGMYVAGSFAGSMALYDYRMKGDALLSWPSPHNGQGITTLRLSYDGRLLFSGARKNDCVHCWDLR-KGSLLSSFWRDASSNQRLGIDLDPAGRYMATGCRKGGEEGKRGALVYDLSTGQEVGGLGLMEDTVSDVSF--HPYAGLVAAGMGERHFDVEHEDNEEDEMVVE----------KQKARRRSGVRLFQVPLAGAQKGEVGE 529
            F  S    +  P   NN  K V+ SPDG CLLT+S+DH+LR+FE+                                 SN ++    L   EG TVYD  WYP M++ ADP +  F+S+SRD P+HLWDA+TG++RASYRA+DHMDELASA SLAF+  G K+FAGF+RM+R FD + P +DF  RP   T+RSR  GQ G+IST+ F+P  +   +Y AGS+AG+  +Y    +G+ LL+    H+G+GI+ ++ S  GR LF+ AR++  +HCWD+R    +L +F R A +N R+  DL   GRY+ATG R G        ++YD+ TG  +     + D  + VSF   P   ++A   G+RH+D+  +  +EDE V +            + R    V  FQ+P   A KG   E
Sbjct:   31 FTASKEFSSASPSCSNNFTKGVKVSPDGLCLLTNSDDHVLRLFEM---------------------------------SNASDSTSLLQAKEGGTVYDYEWYPFMSS-ADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTGTKLFAGFDRMIRFFDLSQPSRDFRARPLSKTRRSR-KGQRGLISTLHFNPDHSK--IYAAGSYAGTTCVYT-EDEGEELLAL-RDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHTFNRVADTNLRIEFDLHCGGRYLATGSRTG------RVMLYDVLTGALLDESIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDLPEDMQDEDEAVADGIDVDMKTTVNSQVRNVLQVYDFQMPQGQAVKGTASE 405

[Close]

BLAST of NO26G00520 vs. NCBI_GenBank
Match: ETL35747.1 (hypothetical protein L916_12160 [Phytophthora parasitica] >ETM42225.1 hypothetical protein L914_12083 [Phytophthora parasitica] >ETP40190.1 hypothetical protein F442_12429 [Phytophthora parasitica P10297])

HSP 1 Score: 286.2 bits (731), Expect = 2.100e-73
Identity = 167/420 (39.76%), Postives = 235/420 (55.95%), Query Frame = 0

Query:  122 FEGSSNSKTTGPRIFNNVVKAVRFSPDGTCLLTSSEDHILRVFEVPHHLVYDTPTSFSVTAAAAADPDSNRINSTVNASNGNEWQPCLACPEGETVYDQTWYPLMNARADPLTACFISSSRDHPIHLWDAFTGQIRASYRAYDHMDELASAHSLAFSPFGDKIFAGFERMVRVFDTATPGKDFDERPTRPTKRSRCGGQNGIISTICFSPQDAATGMYVAGSFAGSMALYDYRMKGDALLSWPSPHNGQGITTLRLSYDGRLLFSGARKNDCVHCWDLR-KGSLLSSFWRDASSNQRLGIDLDPAGRYMATGCRKGGEEGKRGALVYDLSTGQEVGGLGLMEDTVSDVSF--HPYAGLVAAGMGERHFDVEHEDNEEDEMVVE----------KQKARRRSGVRLFQVPLAGAQKGEVGE 529
            F  S    +  P   NN  K V+ SPDG CLLT+S+DH+LR+FE+                                 SN ++    L   EG TVYD  WYP M++ ADP +  F+S+SRD P+HLWDA+TG++RASYRA+DHMDELASA SLAF+  G K+FAGF+RM+R FD + P +DF  RP   T+RSR  GQ G+IST+ F+P  +   +Y AGS+AG+  +Y    +G+ LL+    H+G+GI+ ++ S  GR LF+ AR++  +HCWD+R    +L +F R A +N R+  DL   GRY+ATG R G        ++YD+ TG  +     + D  + VSF   P   ++A   G+RH+D+  +  +EDE V +            + R    V  FQ+P   A KG   E
Sbjct:   31 FTASKEFSSASPSCSNNFTKGVKVSPDGLCLLTNSDDHVLRLFEM---------------------------------SNASDSTSLLQAKEGGTVYDYEWYPFMSS-ADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTGTKLFAGFDRMIRFFDLSQPSRDFRARPLSKTRRSR-KGQRGLISTLHFNPDHSK--IYAAGSYAGTTCVYT-EDEGEELLAL-RDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHTFNRVADTNLRIEFDLHCGGRYLATGSRTG------RVMLYDVLTGALLDESIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDLPEDMQDEDEAVADGIDVDMKTAVNSQVRNVLQVYDFQMPQGQAVKGTASE 405

[Close]

BLAST of NO26G00520 vs. NCBI_GenBank
Match: ETL88986.1 (hypothetical protein L917_11996 [Phytophthora parasitica])

HSP 1 Score: 286.2 bits (731), Expect = 2.100e-73
Identity = 167/420 (39.76%), Postives = 235/420 (55.95%), Query Frame = 0

Query:  122 FEGSSNSKTTGPRIFNNVVKAVRFSPDGTCLLTSSEDHILRVFEVPHHLVYDTPTSFSVTAAAAADPDSNRINSTVNASNGNEWQPCLACPEGETVYDQTWYPLMNARADPLTACFISSSRDHPIHLWDAFTGQIRASYRAYDHMDELASAHSLAFSPFGDKIFAGFERMVRVFDTATPGKDFDERPTRPTKRSRCGGQNGIISTICFSPQDAATGMYVAGSFAGSMALYDYRMKGDALLSWPSPHNGQGITTLRLSYDGRLLFSGARKNDCVHCWDLR-KGSLLSSFWRDASSNQRLGIDLDPAGRYMATGCRKGGEEGKRGALVYDLSTGQEVGGLGLMEDTVSDVSF--HPYAGLVAAGMGERHFDVEHEDNEEDEMVVE----------KQKARRRSGVRLFQVPLAGAQKGEVGE 529
            F  S    +  P   NN  K V+ SPDG CLLT+S+DH+LR+FE+                                 SN ++    L   EG TVYD  WYP M++ ADP +  F+S+SRD P+HLWDA+TG++RASYRA+DHMDELASA SLAF+  G K+FAGF+RM+R FD + P +DF  RP   T+RSR  GQ G+IST+ F+P  +   +Y AGS+AG+  +Y    +G+ LL+    H+G+GI+ ++ S  GR LF+ AR++  +HCWD+R    +L +F R A +N R+  DL   GRY+ATG R G        ++YD+ TG  +     + D  + VSF   P   ++A   G+RH+D+  +  +EDE V +            + R    V  FQ+P   A KG   E
Sbjct:   31 FTASKEFSSASPSCSNNFTKGVKVSPDGLCLLTNSDDHVLRLFEM---------------------------------SNASDSTSLLQAKEGGTVYDYEWYPFMSS-ADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTGTKLFAGFDRMIRFFDLSQPSRDFRARPLSKTRRSR-KGQRGLISTLHFNPDHSK--IYAAGSYAGTTCVYT-EDEGEELLAL-RDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHTFNRVADTNLRIEFDLHCGGRYLATGSRTG------RVMLYDVLTGALLDESIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDLPEDMQDEDEAVADGIDVDMKTAVNSQVRNVLQVYDFQMPQGQAVKGTASE 405

[Close]

BLAST of NO26G00520 vs. NCBI_GenBank
Match: KUF92278.1 (hypothetical protein AM588_10005929 [Phytophthora nicotianae])

HSP 1 Score: 286.2 bits (731), Expect = 2.100e-73
Identity = 167/420 (39.76%), Postives = 235/420 (55.95%), Query Frame = 0

Query:  122 FEGSSNSKTTGPRIFNNVVKAVRFSPDGTCLLTSSEDHILRVFEVPHHLVYDTPTSFSVTAAAAADPDSNRINSTVNASNGNEWQPCLACPEGETVYDQTWYPLMNARADPLTACFISSSRDHPIHLWDAFTGQIRASYRAYDHMDELASAHSLAFSPFGDKIFAGFERMVRVFDTATPGKDFDERPTRPTKRSRCGGQNGIISTICFSPQDAATGMYVAGSFAGSMALYDYRMKGDALLSWPSPHNGQGITTLRLSYDGRLLFSGARKNDCVHCWDLR-KGSLLSSFWRDASSNQRLGIDLDPAGRYMATGCRKGGEEGKRGALVYDLSTGQEVGGLGLMEDTVSDVSF--HPYAGLVAAGMGERHFDVEHEDNEEDEMVVE----------KQKARRRSGVRLFQVPLAGAQKGEVGE 529
            F  S    +  P   NN  K V+ SPDG CLLT+S+DH+LR+FE+                                 SN ++    L   EG TVYD  WYP M++ ADP +  F+S+SRD P+HLWDA+TG++RASYRA+DHMDELASA SLAF+  G K+FAGF+RM+R FD + P +DF  RP   T+RSR  GQ G+IST+ F+P  +   +Y AGS+AG+  +Y    +G+ LL+    H+G+GI+ ++ S  GR LF+ AR++  +HCWD+R    +L +F R A +N R+  DL   GRY+ATG R G        ++YD+ TG  +     + D  + VSF   P   ++A   G+RH+D+  +  +EDE V +            + R    V  FQ+P   A KG   E
Sbjct:   31 FTASKEFSSASPSCSNNFTKGVKVSPDGLCLLTNSDDHVLRLFEM---------------------------------SNASDSTSLLQAKEGGTVYDYEWYPFMSS-ADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTGTKLFAGFDRMIRFFDLSQPSRDFRARPLSKTRRSR-KGQRGLISTLHFNPDHSK--IYAAGSYAGTTCVYT-EDEGEELLAL-RDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHTFNRVADTNLRIEFDLHCGGRYLATGSRTG------RVMLYDVLTGALLDESIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDLPEDMQDEDEAVADGIDVDMKTTVNSQVRNVLQVYDFQMPQGQAVKGTASE 405

[Close]

BLAST of NO26G00520 vs. NCBI_GenBank
Match: KUF82459.1 (Telomerase Cajal body protein 1 [Phytophthora nicotianae])

HSP 1 Score: 283.9 bits (725), Expect = 1.000e-72
Identity = 166/423 (39.24%), Postives = 235/423 (55.56%), Query Frame = 0

Query:  119 IQTFEGSSNSKTTGPRIFNNVVKAVRFSPDGTCLLTSSEDHILRVFEVPHHLVYDTPTSFSVTAAAAADPDSNRINSTVNASNGNEWQPCLACPEGETVYDQTWYPLMNARADPLTACFISSSRDHPIHLWDAFTGQIRASYRAYDHMDELASAHSLAFSPFGDKIFAGFERMVRVFDTATPGKDFDERPTRPTKRSRCGGQNGIISTICFSPQDAATGMYVAGSFAGSMALYDYRMKGDALLSWPSPHNGQGITTLRLSYDGRLLFSGARKNDCVHCWDLR-KGSLLSSFWRDASSNQRLGIDLDPAGRYMATGCRKGGEEGKRGALVYDLSTGQEVGGLGLMEDTVSDVSF--HPYAGLVAAGMGERHFDVEHEDNEEDEMVVE----------KQKARRRSGVRLFQVPLAGAQKGEVGE 529
            +  F  S    +  P   NN  K V+ SPDG CLLT+S+DH+LR+FE+                                 SN ++    L   EG TVYD  WYP M++ ADP +  F+S+SRD P+HLWDA+TG++RASYRA+DHMDELASA SLAF+    K+FAGF+RM+R FD + P +DF  RP   T+RSR  GQ G+IST+ F+P  +   +Y AGS+AG+  +Y    +G+ LL+    H+G+GI+ ++ S  GR LF+ AR++  +HCWD+R    +L +F R A +N R+  DL   GRY+ATG R G        ++YD+ TG  +     + D  + VSF   P   ++A   G+RH+D+  +  +EDE V +            + R    V  FQ+P   A KG   E
Sbjct:   28 LHRFTASKEFSSASPSCSNNFTKGVKVSPDGLCLLTNSDDHVLRLFEM---------------------------------SNASDSTSLLQAKEGGTVYDYEWYPFMSS-ADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTDTKLFAGFDRMIRFFDLSQPSRDFRARPLSKTRRSR-KGQRGLISTLHFNPDHSK--IYAAGSYAGTTCVYT-EDEGEELLAL-RDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHTFNRVADTNLRIEFDLHCGGRYLATGSRTG------RVMLYDVLTGALLDESIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDLPEDMQDEDEAVADGIDVDMKTTVNSQVRNVLQVYDFQMPQGQAVKGTASE 405

The following BLAST results are available for this feature:

BLAST of NO26G00520 vs. NCBI_GenBank

BLAST of NO26G00520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM23091.1	8.400e-147	57.82	telomerase cajal body protein 1 [Nannochloropsis g...	[more]
XP_005855942.1	4.800e-118	76.09	telomerase cajal body protein 1, partial [Nannochl...	[more]
XP_024573114.1	7.200e-74	42.22	Guanine nucleotide-binding protein [Plasmopara hal...	[more]
XP_008908852.1	1.600e-73	39.48	hypothetical protein PPTG_13174 [Phytophthora para...	[more]
ETI42346.1	2.100e-73	39.76	hypothetical protein F443_12517 [Phytophthora para...	[more]
ETK82355.1	2.100e-73	39.76	hypothetical protein L915_12241 [Phytophthora para...	[more]
ETL35747.1	2.100e-73	39.76	hypothetical protein L916_12160 [Phytophthora para...	[more]
ETL88986.1	2.100e-73	39.76	hypothetical protein L917_11996 [Phytophthora para...	[more]
KUF92278.1	2.100e-73	39.76	hypothetical protein AM588_10005929 [Phytophthora ...	[more]
KUF82459.1	1.000e-72	39.24	Telomerase Cajal body protein 1 [Phytophthora nico...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL049	nonsL049	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR037	ncniR037	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR045	ngnoR045	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK006031	NSK006031	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO26G00520.1	NO26G00520.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|600324	gene_7873	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100536g5	gene7361	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO26G00520.1	NO26G00520.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO26G00520 ID=NO26G00520|Name=NO26G00520|organism=Nannochloropsis oceanica|type=gene|length=2224bp
TTTTTGGTCGGCATGGGCCAGGAGTGGCGTAGGGCATAGTGTTGGTACTT
CGTGTCTGGCTTACGTAGACTGTTGTCGTTTTTATTGACATTACTGGTAA
TATATCTGCTTCTGATGCGCGTGTAATGTATATACCTCTCACTGGTTTTC
TTTTGTAGTACTGCTGCATCTATTGACGGTGCTGGAACGCGAAGTCATGT
TCGTCGTTCGGGTTGGCGAGCGTTCAGGTTTTGTAGCCGCACCAGAGACA
AAGAGACTTAAGCATCCTTTCTCATTCATGAGgtatgtgctggtgatagg
aggcatcgtcatggtcttgtgctagaccgctcggcagcacgcattatcaa
aacgagggttcgatctcactttaccctcccctacctttcaccttcccaca
ctcttcacactcagCGCCAGAGCCATGGAATCAGACGAGACCAACGATGC
GACATTGATGATACCTAATCCTGTCACTGCGAATGACATTGCCGAAGAAC
CACCGCCAGCATCGCCCGCAGGAGAGCCAAGGCCTTTAGAAGATGGGGAG
GTTGACGTATCTTCCCCTGCTCAGGTGGACGCTGGCGCGGCAGCCACCGC
CATGGCTGCGTTGTGGCACCTTCCCATACCACACGGTCTGAATTTTGAGG
CCTCAAGCGGAACAGCGGTAGTGTGCGAGAGCATTCAAACCTTTGAAGGC
AGCAGCAATAGCAAGACGACGGGGCCTCGCATATTCAACAACGTCGTCAA
AGCCGTGCGTTTCTCCCCAGATGGCACCTGTCTACTCACTTCGTCCGAAG
ACCACATCCTCCGTGTGTTTGAAGTCCCGCATCACCTTGTTTATGATACC
CCAACCAGCTTCTCTGTTACTGCTGCCGCAGCAGCAGATCCCGACAGCAA
CAGAATCAATAGTACCGTCAATGCTAGCAACGGTAACGAATGGCAGCCCT
GCCTTGCCTGTCCTGAAGGTGAAACTGTCTATGACCAAACCTGGTACCCC
TTGATGAATGCTCGTGCCGATCCTTTGACTGCCTGCTTTATCAGCAGCAG
TCGCGATCACCCGATTCATTTATGGGACGCATTTACCGGCCAAATCCGCG
CTTCGTATCGCGCGTACGACCACATGGACGAACTGGCCTCGGCGCACTCC
TTAGCATTCTCCCCATTTGGCGATAAGATTTTTGCGGGCTTTGAGCGGAT
GGTCCGGGTATTCGATACGGCGACACCGGGGAAGGACTTCGACGAACGCC
CGACGAGGCCGACGAAACGGAGTAGGTGCGGAGGCCAAAATGGAATTATT
TCCACTATTTGTTTCAGTCCTCAGGATGCAGCGACGGGGATGTATGTGGC
CGGATCGTTTGCAGGgtaagtttggtcgccaggtgatgaaaggagagtgg
gaaaaagggggctatgtctttgtctatatatctatattttgttgtttgtt
gttgtgtttgttgatttgttggtgtgggtgtgggtgtggggggggggtgc
ctgcacctgcgtgtgaatacttacttattattcatgtgcctgtgtcaact
tcagcacacgcgtgtgccagtctcattttaccttataatgagtatccaca
aattgtactctttccgtcctttcgtttcagATCTATGGCCCTTTACGACT
ACCGGATGAAAGGCGACGCCCTCCTTTCCTGGCCTTCTCCACACAATGGT
CAAGGGATCACTACTCTCCGTTTATCGTATGACGGCCGCCTTCTCTTTTC
TGGAGCACGCAAGAACGACTGTGTGCATTGTTGGGACTTGCGGAAGGGTT
CGCTGCTTTCCTCCTTTTGGAGGGACGCATCCAGCAATCAGAGACTTGGG
ATTGATCTCGACCCCGCGGGACGGTATATGGCGACTGGGTGTAGGAAGGG
AGGGGAAGAAGGGAAAAGGGGGGCATTGGTATATGATTTGAGCACAGGGC
AGGAGGTGGGAGGGCTGGGGCTGATGGAGGACACGGTGAGTGATGTGAGC
TTTCACCCGTATGCGGGTTTAGTGGCGGCTGGAATGGGAGAGAGGCACTT
TGATGTAGAGCACGAGGATAATGAGGAGGATGAGATGGTTGTTGAGAAGC
AGAAAGCGAGGAGGCGGAGTGGGGTGCGTCTATTCCAGGTGCCACTGGCT
GGAGCGCAGAAGGGGGAGGTTGGAGAGGGGGAAGGGGAGTAAAAGTAACA
TGTACAAAACAAAGTTGACAGGAA

protein sequence of NO26G00520.1

>NO26G00520.1-protein ID=NO26G00520.1-protein|Name=NO26G00520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=533bp
MFVVRVGERSGFVAAPETKRLKHPFSFMSARAMESDETNDATLMIPNPVT
ANDIAEEPPPASPAGEPRPLEDGEVDVSSPAQVDAGAAATAMAALWHLPI
PHGLNFEASSGTAVVCESIQTFEGSSNSKTTGPRIFNNVVKAVRFSPDGT
CLLTSSEDHILRVFEVPHHLVYDTPTSFSVTAAAAADPDSNRINSTVNAS
NGNEWQPCLACPEGETVYDQTWYPLMNARADPLTACFISSSRDHPIHLWD
AFTGQIRASYRAYDHMDELASAHSLAFSPFGDKIFAGFERMVRVFDTATP
GKDFDERPTRPTKRSRCGGQNGIISTICFSPQDAATGMYVAGSFAGSMAL
YDYRMKGDALLSWPSPHNGQGITTLRLSYDGRLLFSGARKNDCVHCWDLR
KGSLLSSFWRDASSNQRLGIDLDPAGRYMATGCRKGGEEGKRGALVYDLS
TGQEVGGLGLMEDTVSDVSFHPYAGLVAAGMGERHFDVEHEDNEEDEMVV
EKQKARRRSGVRLFQVPLAGAQKGEVGEGEGE*

Synonyms

Publications