NO26G00510, NO26G00510 (gene) Nannochloropsis oceanica

Overview
NameNO26G00510
Unique NameNO26G00510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5032
Alignment locationchr26:179892..184923 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:179892..184923 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
Homology
The following BLAST results are available for this feature:
BLAST of NO26G00510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006033NSK006033Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00510.1NO26G00510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600322gene_7871Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00510.1NO26G00510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00510 ID=NO26G00510|Name=NO26G00510|organism=Nannochloropsis oceanica|type=gene|length=5032bp
TCCTACACTCTTACTTTGATTTTATGGAACTGGTTAGCTGCGGCCTTCTA
AAGTTGGTGAGGCAGTTAGTGGCACTCGCTGTGCATCTCAAGTCCAAGCG
CCACACTGGAGCGTGAATGAGGTCACATCGTCCCCACGCCACTCTTCCAA
CAGTCACATCACCCACAAATTTGAATGCCAGTGCGAGAAATCACTCAACA
AGTACGATGCTTTTCATATTTCACCCGGCAAGGGTAAGTTTGTGTCCTTT
GAAATCAATTCACCCCAACATGTCGGAAGGGTACATTTTGCTTCCGTGTC
TTTCCCCGGCCCACCGTGCATTTCCCCCTTTTCTGGCCGTGCATACATAA
CGTGTTACAGGAGGCGAAGATCTGCCCACACTTTAGCTTGTCAATTCTAT
ACTAGCATGTCAATTCTATGCCGCTGCTGTCCAGCTATTCTTTCACTTTA
TCACCAACATGACTTCAAAGTGCGAGAGGCACTCGCGACAACGGCGAACC
CCGAAGGGCCTTTTTTCTTCCTAACCATCTCATCCTACACTCCACCACCA
TCTACATAGTTACGGGCACTGTGCGTTATGGACGCGGAGGTAAACGTGAA
GGATGGCGTTTCTGCTGCTGCTGGCGGCCACTTTGTTCTACCTCCACCTC
TTCCTCCTGCGCTGCCTCTCCTCCTCACCTTGCCCGACCTCTCCGAGGCC
CCACCACCTGCCTACCAGATGCACGTTACCGCCACCCTCACCTATCTCGA
CGACCTACTGAAGCGCCACCCAAATCCTACTCGAGAGTCTCTGGCCCTGG
TCTTTGCTTTCGCCCGACGCGTTTTCGCCCAGCAGCAACATTCCCCCTGG
AGGGCACAAGGAGGAGCAGAAGGCGACGCTGCCTTTGCTGCTTGCATGGA
TGGGATCCTCAACATCTTACCTCGCTTCCTCGAGCCCATGGGTAAAACCA
CATGGCTGTATCCTTATCCTCTTTCCCCTGCATCTACCGCCAGTTCCTCC
TCTTCTCTTCCTCCCTCCTCCTCATCGCCCTACAATAAAGACCGTCTAGA
CTGCCTCTCCTTCGCCTGCAGCGAACTCCTCGCTCTCGATAGTCACGTCT
ACGGAGACACGCGCAAATTAATGCTCGTGTGGAAACATCTGGTTAGTCTT
GCCACTGCCCACTCACATTCCCCAGCCCTCGCCTCCCTCATGGTGGCTGG
AGGAAGAGGAGGAGGAGGAGGAGGAGAAAAAGAAGGAGGAAAGCGGAAGG
AAGGAAGGGTTGTGTTTAGCGCTGAAGAAGCGCTGTGGGTATTGGTGAGA
AAATATGCCGAGGAAGGGTTGGGGCAGATGGAAAAGGCGTTACGGCGGTT
GTCTCAGGCCTGTAGTAGCAGCACCAGTGCTTCCTCCCTCCCCTCTTCCT
CCCACTTCTCCTCCTCTTCCTCCCACACGCCCATCACCACCACACCTGCA
GCAACAACAGGAGCAGCAACAGCAGCGGAAGACGTAGCAACGACAACGAC
ACCACTGAGTGAATCCGACGTTCAGGCCACGACAGTGTGCTTCACTCAAG
CCACTAAATTAATGACCCTCTTCCTCCTCCGCATCGCCCTCCTCATTCTC
CATTTCGGCCCTTCCTTCTGCCCCCACCCTCCCTCTCTCCCTCCCTTTTC
CGCCACCGTAGCACCAGGACGAGAGAGGGAGGAAGGACAGGAGGTGTCAC
CTCCTTGTCCTAGGGTCCTGCAGCAAGCCCTCGTCTTATTCATTCGTCTA
CGCGGTATACTCGACCCGGCTCACCCTCTCTGGCAACCGCTCATCGAGCA
GCAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCCGTCGCAACAACCACAAC
AACAGCAACAACAGGCACAAGCATCCAAGCCCTCCCTCCCTCCTGCCCTC
GCCGCCCTCCTCCTCCTCCGTGGCCTGGTCGACGCTAAGCTCCTTCCCAG
AGTGGAAGCCGCCTTCCTCAAATCCGTCTTGGGCTGCACCTCTTCCTCCC
TCACGTCCTCCCCAGCTTCCTCCCCCCCATCCTCCCGACCACCCTCCTCA
AATTCCCTCTTAACCACCAATACGCCGCCAGCAGCAGCAGCAGCAGCAGC
AGCAACAACTACTACTACTACCACTACTGAAAGAACAGCTGGAGCAGAAA
TAGGAGCGGGAGCTGGAGCAGGAGCAGCAGCATCTTATACCCCGGGCTCC
CTCCCTTCCTCATCCTCGTCCCTACCCGGCAACGGCGCAGTGGGTCTGCA
TCTCATCACATCCATGGCTAGCGTCCTCTCTGCCCAGAGACAGCTCTCCA
TTGATAGCTTCCGCCTCCTCCAGCCGCATCAGCAGTCGCATCAGCAGTCG
CAGCCGCAGCCGCAGCAAGTCGGTCGGCAGGAGGAAGGGCTAGAGGGAGG
GCTAGAGGGAGGGCAGGAGGGAGGGCTCATGAGGAAAGCAAGGAAGAGGG
CCATGGACACCAGTAAACGGACAGCGACGTTAGCACTAGGAGCCCTCCGA
CTGCTCCATTGCGTGGTGGCCAAGCTGAAGGAGGGAGGGAAGGTGGGAGG
ATGCACACTGCTAGAGCGACAGGCTCTCCCTGCGTTTCTCTCAGGAATGC
CTACGGCAATCACCCTCGTCGTAGAGGCCGGTATTCTTCCCTCCCACCCT
CCCTCCCTCCCTCCCTCCCACCCTCCCTCCCTCTCTCCCTCCCTGTCTTT
CTCTTCCTTCTCCTCCTCTCTCTTATACCCCACCGCCGCCGCCCTCGCCC
TCCTGCTCGCCCGTCACTGCATCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCTCTCCACACCGTGCAGCGTCACCTCCTCTCCCCTTCCCTCCTCTT
CCACCCCCACCCCCTCCCCCGCTCCCTCGCCTCTCTCGTCCTCCTCCTCT
TCCTCCGCGATTACTGCCCCCCTGCCCTGCAGACAGGATTCGTTCTCTCC
CTTCTCGCCCTCCTTCGCTCCCTCTCCCCGCATCGACAGCACCACGTAGC
CACCACCCTCATCCCCTCCCTCCTCACCCACGCCGTCTCCTGCCAGGAAT
CAAAAGCCAAGATCCTCAAACAAATCGTCCTCGACACCCTTTCCTGCTTC
CCACCCTCCCACGATCCCTTCCTCCCTCCCTCCCTCCCCCCCTCCCTCCT
CCCCTCCCTCCTGACCACCCTCCGGCTCCTTCCCCCTGCCTTCGCCAGCT
TTCCTCCCAAGCCTCTCTTGAGGCTTTTGAGGCCCCTTTCTGAGCACTAT
AGAAACCTCTGCCCCTCCTCCTCGTCCTCCCTCCCTCCCTCCCTCCTTCG
CCGACAAGGAGGCTTGGGGCTAGCGTGGGTGCTGCTCGCCTGGGGAGTAT
CTCTCCCCCCTCTCTCCCTCCCTCCCTCGGCCCATGCCTCGATCCGACAC
CATGCATTGGCTGTGCTGGAGGAGGGGGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAAGGAGGGAGGGAGGATCAAAGGATGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAAGAATGGTTGGAAGTACTGGAGTCGGCGTTGGGATGT
ATCTTGTTGCTGGTGAGGAGGGAAGAGCAGCTGCTAGGTCAGCAACACCA
GAAAGGAAGGGCAGAAAGCGACGCTGCAGCAGCAGGATTGATTGCCGACT
CAGCCATGCGATTAATACCGGTGCTTCAGGAAGAGGAAGGAGAAGGAAGA
GGAAGAGGAGGAGGAGGAAAAAGAAGAGAACGAAGAAGAAGAGAGTGTGT
TGTAGCAACAGCAGCAGTCTCGTGGCCCTTCATAAGAGACGTGACACGCG
CCGTGCTGGCAAGGCAGGGCGTGGAGGAAGGCACGAGCAGCAGCATCGAC
AGCAGCAACAGCAACTGCAACAGCAACGGCAACAGCAGCACCAGCGGCAG
CAGCAGTCTGTTGGCAAGCTATTCCCACGTAGACAGATCCCTCTCCCAGC
TTTGGCAGCACTTTCTTCTCATATCTTCTTCTTCAACCAGCACGTCTTCC
CTCCCTCCTTCCCCCCCTCCCTACCCTTCGATTCATCGCCTTCTCGCTCG
GACAGAGGCAAATCGCCTTCTTACTACTGCTGCTGGTGCTTCCGGCCGTT
CTCCTTTTGTCTCGTATCTCCCCTTTGTTCCCTCTGACCCTGCTGTGGGA
CGAGAGGGAAGACAACGAGGACAAGAAGGAAGAAGTTCGGAGCTTGAGAG
AGTTCTGAGGGGGTTGGCGCAGGAGGAGGATGGGGAGAAAGAGAGGGGAG
GTGTGTGGGGAGGTTTGTCGAGAGAGGAGGAACGCCGATTATTGCATTCT
TTGCCGTGTGATGTGCTTGCATATACGCCTCGCTTAGGGCAAGGGAGGGG
GAGAGGAAGGGGAGGGGAAATAGAGGAAGCAGGGGCGATGATGGACGTGA
TAGAGGTGGAGGATAAAGAGGAGGAGGAGGAGGAGGGAGGGACGGAGGAA
ACGGGGGAGAAAAGGTTGTGGTCGCTCTCTCTAAGTCGGCGAGCGATTTT
CTTGGGACCTCATGCGAATGCCGTATTGTTGTTGCCGGAGTCTGCGTGGT
GGAATGAGGAGGAGGGAGGGAAAAGGAGGAGGAGCGCACAGGAGTTGGTG
CGCCAGCTTTTACTCTCACACACAGCATCCGTCGGGGAAGGGGTGGAAGA
TATGGGAGGAGGAGGGCAAGCAATGGGAGGATGGGTGGAGGGATGGACGG
AAGTGGTGGCGATGGATCAGAAGGAGGAGGAGGAGGAGAAATGGAAGGGA
GGAGGGCAAGAGATTACGTTGAGCGTGCGGCTTGACCAATGGACGAAATG
AAAATGGAAAGCGCGAAGGAGGGGGGAAAAGAGGAGAGTGGACGAGAAGC
TTAAGGTACATGTGGTCAAAGAACTGGCTCGTATAGCAGGGAGGGTAAAA
AGAGAGGGAGGACAGGAAGCCGGCGGCTCGAGCAATGTGACACTGGCTTG
TAGGATAAAGAAAAAGTACAAAAGTCTGTAGAACAGCCGAAATGACAGCA
AATCAACATGTACAGTCCCTGACCTTATCTAC
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protein sequence of NO26G00510.1

>NO26G00510.1-protein ID=NO26G00510.1-protein|Name=NO26G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1408bp
MDAEVNVKDGVSAAAGGHFVLPPPLPPALPLLLTLPDLSEAPPPAYQMHV
TATLTYLDDLLKRHPNPTRESLALVFAFARRVFAQQQHSPWRAQGGAEGD
AAFAACMDGILNILPRFLEPMGKTTWLYPYPLSPASTASSSSSLPPSSSS
PYNKDRLDCLSFACSELLALDSHVYGDTRKLMLVWKHLVSLATAHSHSPA
LASLMVAGGRGGGGGGEKEGGKRKEGRVVFSAEEALWVLVRKYAEEGLGQ
MEKALRRLSQACSSSTSASSLPSSSHFSSSSSHTPITTTPAATTGAATAA
EDVATTTTPLSESDVQATTVCFTQATKLMTLFLLRIALLILHFGPSFCPH
PPSLPPFSATVAPGREREEGQEVSPPCPRVLQQALVLFIRLRGILDPAHP
LWQPLIEQQRQQQQQQQQPSQQPQQQQQQAQASKPSLPPALAALLLLRGL
VDAKLLPRVEAAFLKSVLGCTSSSLTSSPASSPPSSRPPSSNSLLTTNTP
PAAAAAAAATTTTTTTTERTAGAEIGAGAGAGAAASYTPGSLPSSSSSLP
GNGAVGLHLITSMASVLSAQRQLSIDSFRLLQPHQQSHQQSQPQPQQVGR
QEEGLEGGLEGGQEGGLMRKARKRAMDTSKRTATLALGALRLLHCVVAKL
KEGGKVGGCTLLERQALPAFLSGMPTAITLVVEAGILPSHPPSLPPSHPP
SLSPSLSFSSFSSSLLYPTAAALALLLARHCILPPSLPPSLPPLHTVQRH
LLSPSLLFHPHPLPRSLASLVLLLFLRDYCPPALQTGFVLSLLALLRSLS
PHRQHHVATTLIPSLLTHAVSCQESKAKILKQIVLDTLSCFPPSHDPFLP
PSLPPSLLPSLLTTLRLLPPAFASFPPKPLLRLLRPLSEHYRNLCPSSSS
SLPPSLLRRQGGLGLAWVLLAWGVSLPPLSLPPSAHASIRHHALAVLEEG
GREGGREGGREGGREDQRMEEEEEEEEEEEWLEVLESALGCILLLVRREE
QLLGQQHQKGRAESDAAAAGLIADSAMRLIPVLQEEEGEGRGRGGGGKRR
ERRRRECVVATAAVSWPFIRDVTRAVLARQGVEEGTSSSIDSSNSNCNSN
GNSSTSGSSSLLASYSHVDRSLSQLWQHFLLISSSSTSTSSLPPSPPPYP
SIHRLLARTEANRLLTTAAGASGRSPFVSYLPFVPSDPAVGREGRQRGQE
GRSSELERVLRGLAQEEDGEKERGGVWGGLSREEERRLLHSLPCDVLAYT
PRLGQGRGRGRGGEIEEAGAMMDVIEVEDKEEEEEEGGTEETGEKRLWSL
SLSRRAIFLGPHANAVLLLPESAWWNEEEGGKRRRSAQELVRQLLLSHTA
SVGEGVEDMGGGGQAMGGWVEGWTEVVAMDQKEEEEEKWKGGGQEITLSV
RLDQWTK*
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Synonyms
Publications