NO26G00260, NO26G00260 (gene) Nannochloropsis oceanica

Overview
NameNO26G00260
Unique NameNO26G00260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1549
Alignment locationchr26:89822..91370 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:89822..91370 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO26G00260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00260.1NO26G00260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00260.1NO26G00260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00260 ID=NO26G00260|Name=NO26G00260|organism=Nannochloropsis oceanica|type=gene|length=1549bp
AGGAACTACAACTACCGCAATTTTGATCCGACCACTCAAAGCGAGAGGGC
CCGCCTGCCCTCTCCTTCAACAGCACTATCAGCACTACCAGGCGTAAGAT
CAAGAGCGATGGACGACTGTTGCCATGGCGGGAGTGGTTTTACATTCAAT
CATCACCCTTCTACACGGCGCTATGCCATGAAGCACCAGCAGCATGGATA
TGAGCACCCTCTCCACCACTCTGCGGTCAAGAGGGCCACGACGGCACACT
ACTCCTCCCCTACTTCCTCCTCCTTCTCCTCCTCCTCCTCCACTCTCTCC
ACCTCCTCCCACCCCTCCCCCCCGCTCGCGAGAGAAACACCCAAGAAAGT
CTCCTCACCTCCTTCTTCTTGCTCCTCGTCTTCGCCCCTCCCTTCTACTC
GCCGTGCTTTTTCCTCCCCTCCCCATCTCTCCACCCTCCTTCCTCACACC
CCTCCAGCCGTCGAAAGCACGAGCACTGTCAACCCTTCCTTCCTCCCTCC
CTCTTTCCTCCATACTCACTCCCTTTTGGACCAGCCTGGGCTTAGTGACG
GCGTAGACATGTGTGGAGAAGCGCCCTCCTTCCTTTCCTCCCTCGGGGAC
TCCTCCTCCTCTGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCGC
CTCCTCCTCCTCATTCTCTTCCTCCTCGTTATCCTCCCCCTCTTCGCCAT
CGGCTCGACGGATGATGGCCGGAGGGAGGGAGGGGAAGAAGGAGGGATGG
AGGGATTCGGAGAAGCAGCAGGCGTTGCGGATGATGTTGGTTGGACGAGG
AGTAGTAGGAGGAGGGGGGAATGGAGGAAGCAGCAGCCACAGCAGAAGTG
ATAGTAGCAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGC
GGCAGCACTATCACAACTACCAGCAGCATCAGCAGTAGCGGCAGCAGCAG
CAACAGTCCCCTGCCATTTGTTGGTCAAGAGGGTGCACCTCACAAAGGAG
GAAGGGAAGGAGGGACGTCGTCGCTTCTGCTGTCGCCTGTGAGGACGGGG
AGGGTTACTTCGCTTTCGCTTTCGGGTCCTGAGgtgaggaaggagggagg
gagggagggagggggggggggggatggtatggtgttgtcgtctcgggtag
acagagctcaatcttctccatcgatgcatgttccactgacttattttatt
gttttcttttcttttactttgccatgcaatgtaatttattatttacgtat
acatttattcattgattcattcatttattcatttattctaacaaaaacag
TTTTACGGCGCCTCTGAGGTGATGATGGAGGCCATGAACGAAAGCGAGGG
CGAGGTGGAGGATGAGGGAAAGGACGGGGAAGGGAGGGAGGGAGGGAAGG
CTTGAGGGAGGACGTACCTTCTGCCATATATGCTTGCTTGAAGGAGGATG
GGAAAGAGGCAAAAAAGGAGGGTAGGGTGGGGCGAGGGAAAAAAAATATT
TTCGTGGAAAGGAGAGAAGGAGACTTCCCGGAAGAATGGAGGGAGGGAG
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protein sequence of NO26G00260.1

>NO26G00260.1-protein ID=NO26G00260.1-protein|Name=NO26G00260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=360bp
MDDCCHGGSGFTFNHHPSTRRYAMKHQQHGYEHPLHHSAVKRATTAHYSS
PTSSSFSSSSSTLSTSSHPSPPLARETPKKVSSPPSSCSSSSPLPSTRRA
FSSPPHLSTLLPHTPPAVESTSTVNPSFLPPSFLHTHSLLDQPGLSDGVD
MCGEAPSFLSSLGDSSSSASSSSSSSSSSTASSSSFSSSSLSSPSSPSAR
RMMAGGREGKKEGWRDSEKQQALRMMLVGRGVVGGGGNGGSSSHSRSDSS
SSNSSNSSNSSSSSGSTITTTSSISSSGSSSNSPLPFVGQEGAPHKGGRE
GGTSSLLLSPVRTGRVTSLSLSGPEFYGASEVMMEAMNESEGEVEDEGKD
GEGREGGKA*
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Synonyms
Publications