NO26G00230, NO26G00230 (gene) Nannochloropsis oceanica

Overview
NameNO26G00230
Unique NameNO26G00230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6330
Alignment locationchr26:75023..81352 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:75023..81352 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR027640Kinesin-like_fam
IPR001138Zn2-C6_fun-type_DNA-bd
Homology
The following BLAST results are available for this feature:
BLAST of NO26G00230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR086ncniR086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00230.1NO26G00230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|379322gene_10609Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00230.1NO26G00230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00230 ID=NO26G00230|Name=NO26G00230|organism=Nannochloropsis oceanica|type=gene|length=6330bp
ACAGGAACGATGGCAGACATAATAGAAAAACGGACCTGCATGGCATGCCG
CAAAAGCAAGgtgcgaagggagggggaaagggagggagggcaccttggct
aagcatcaaattagacgggaaattcccgaagtggagcgacgaatgcccgg
tcaccctgactagtccataagaagggctgaggtgagggaagcgatggtgt
gggagggtgctccctaccttcctcccattcccgttcttcgccctgggcgg
gggcagcgagggcaagagctgctggagacagggttaaggcgactgaatgc
ctggctttgtcacagccgtcgctgcgttaaatcagcgctgtgtcgatgcc
ttgtggtgccggggccggtcttcctcgacgctccttgtcggggggatggg
gagggtcttggaggagaaagggcatgtctttgcgagagagggaagaagaa
agggaataaaccatggatttcagtgctctgccctcctcctccttcttctc
ccctacctccttgtgccgctgctgctgctccttctgctgcgactgctgct
gctgctactgcttgtttcttttttcacgtctggctcacactgcatgtccc
tctcttcctccctccccctccccctccccctcccccctccctcttatctc
gcatagGTCCGCTGCTCCAAGGATGTGCCCTGgtgagtcttcattccctc
cttccctccctccctccctccctccttcacttcctccttcttcttgagtc
caaagccctccctcctcctcgctcgcgtgccgccccctcctcctcgcctt
tctcaccctccctcttccttcccccctccctccctcctttgcagCACGCG
ATGCCTCCGCCTAGGCCTTAATTGTGTGGAGCAAGTCCGGGGACGGGGAC
GGCCCTTGGTCTCCTACATGCTGGCAgtaagggcaggagggagggcggga
gggcgggagggcgggagggaaggaggggatgcaattgcagtgagtaattc
gtgagagcgatgaggataaataaggtctttttggccactatttccctccc
tccctccctccctccctcgctccttccttccttttaccgcgtaccaaagc
gcctgccctcatctatcccctccctctcccccctccctacctccctccct
ctctcccccagCCTGCCCACGGGACCGGAACCGACAGTGACTGCCACAAT
TCCGACCTGGACTCCTCCCTCCACTCCGACTGCTCCTCCCTCCCGCCCCA
CAGCCACTCCTCCCTTCCTCCCTCCTCCCCGCACATTACCCATCCCCCTC
CCTTTGCCTCGGCCTCGGTCTCCTCTGTGGACGGACGAGGAGGAGGAGGA
GGAGGGCAGGCGCACTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGGAGGGAGAGCTTGGGCTGGTGCATCATGAGCCGCAGCTGCACCAAC
AACGCAGCTATCAACAGTCCCTGGATCATCAGCAACAGCAACAGCAGCAA
CAGCAACAGGGATCTTCCTCCTCCACCCTCCCTGCATTGCATGAATTTTT
CCTCGATCCCATGCGGACTGgtgagggagggagggatggagggaggaggg
catgaaatatacccacatccatcacacacacggctctccgagtcgagaat
cttatactcttctcttccctccctccttccctcccgtccttcctcctttc
ctccctctcccttacttagCCAATATCAACCGTCGCAAGCTTCTGATCGT
CCTCAGGGCCTGGGGAATGCTCGCGGCCAAGACATTGACCAAATCCACTT
CTTCTTTCCCTCCCTCCTTCCCTCCCCATCACCCACCCGGAGGCATGAAC
CTCAGTGGGGTCAATGGACAGgtgagtccctccctccctccctccttcca
tccctctcactatcttcccatcggtcatggtctcatcctccctccctccc
tccctccctccctccctccctccctccctccctcagTTCTTCCGCATCCT
CCAAGGCGTGGCCAGCACCTTCGGGCTCGATCTTCAGgtaagaagagagg
gagggagggagggaggcagcgagggaaggaggatggtgatgctttgcctc
gaatcactcgttaatagctgtgtccctgaccatgccaccccctccctcct
tcccgccctccctccctccctcagGATGTCCTCCACCTGGAGCCAGAGGT
GTACGCAGCACTGTGTGAGGGGAATGGAAGGAACGAGCGGAGAGGGACCG
CGGGAGGGGCCCCGCGCGAGGTGCCCATGTACATCAAGgtggggagggag
ggaggggaggagggtgactttttgaattttcgaatatgggcatgacgttc
gaatctcattgttcttccccagctctcaaggaaggagtccttgttctcaa
gcatgcacctatcttgccttcccttcctccttccccccctccctcagGCC
CTGGACTGCGAGGCGTTCGCCGTCTCTCGACGTGTGCTTTGCCAGGGGGA
GAGCAGCTACACCTGCAACGAGGTGTTTTCCTCCATGTTTGCAACCAAGG
CCATGGCTGAACGGAGTCCGGAGCGAGCGACGGGTATTGATATCTGGCTA
GGgtgagtcttccctccctccctccctccctccctccctccctccctccg
ccaggtcctccccttccctttggtacatgaagccttaatctccctccctc
cctccctccctcctcagCTGCATCGATTCGGAGGACCGCAAGGAGTTTCT
GCATTCCTTCCTCTCCACCCTTCTCGCCTCCCCCTCCCCCTGCACCGAGA
CGGCCGGAATCTTCAAGgtacgtgtggaggagagggagaaaaaggtggga
aaagaaggatggaaaaaaggagggagagaaggaaagcgcggaggagtgag
agggagtagaacggatgctcgtcacgaaacaaagtgaaaagaggaaggcc
aatgttcccaagccctcaagccctccctccctccctccctccctccctcc
ctccctctagTGCAAGGACAAGAACGGTCGCGTCATAGCAACCCACCTCA
GGCTGCGTTCCTATTACTCCCAAGCGGGCGACTACGTCGCTTATTCCCTC
TTCCTTGCCCCGCTTCCTCCTGTCCGCCTGGGCTCCCTCCTTGCTCCTCC
TGCACACGCACCCACGCTACTGCCGCACCCACGGCAGgtacgccctcctt
cgtgccttcccccgctgcctcactctttccctcttcttccattccttttt
gtcttccttctttcttcgctccgtcttttctcaaccactctctctctttc
tctctcacacacactctcacactctctcactcactcactcactctctccc
tattactctctctctgtctctctctctctcttacacacacactttctctc
tctttgcgggaccctagcagATGGCCAGCCATATCCCTCCCTCCTCCTCC
TCCTCCTCTTCCATCGCCTCCCTGACCTCTGTCACGGGACCTTTCGTCCC
CTCCCTCTCCCCCTCCTCCTTTGGTGCTATGCCCTCCCCCGGCGCCTCGC
CCCTTCCCCTTCACCACCACCCCTGCGGAGGGGAGGGCGGGGGGGAGGGA
GGGGGCGTGAACTGCACCAACAGCAATAATAGCAGCTTGCGTAACACCAA
CTACCACCACCCGCCGCAGCAGCAGCAGCAACAACAACCACAACAACAAC
CACAACAACCACAACAACCACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAGCAACAGCAGCA
GCAGCAGCAGCGCCATTATCAAGGAGAGGGAATGGCCAACAGAGGAGGTC
TAGGAGGGCAACAGCCTCTCCGTCCTGTCTTCCGGGTAGCAGCCCCTCCT
CTGGAGGGAGGCGACAATGTGCACCAGCAGCACCAGCAGCACCAGCAGCC
TTTTTCATCACATCATAATCATCATCATCATCAGCAGCAGCAGCAGCAGC
GGTTGGAGGAGAGTGAGGAGAGACCTCGTGCGGACTCGCTCTCCTCCATT
TCCACCATCGGAAGCGTCACCTCCGATAATTCACCCTACTCCCACCACCA
CCAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCATCATGATCATCATT
CCTCCTATCAGCAGCCACCGCAGCACCACCAGCAGCACCAACAACAACAG
AGCTATTACGATCCTCATCCTCCCTCCATCACTCCAGCTCCTGGCGGCCT
CTCCCTCCTCCCCTCCTCCTACTCCTACCCTCACCCTTCCTCCCTCCCGG
CTCCCCCCTCCTCTCCGGTTGAAAACTCATTTCCTTCGGCTCTTCCTCCT
CCCTTATCGGGTCCTGGACCTTCCTTCCCAGGCCGCCATTCCCCTTTGAC
CACCCCCTACATCACCACCGCTCCTTCCGCCGCCAGCAGGAGCAGCAGTA
GCAGCAGCAACAACAAGAAGCGACCTCGGCCCTCCCACTCTTCTTCAAAG
TCTGTTGAGGAAGAGGAGGGGAGGGAGGGAGACCACCACTACCACCAGCA
ACAGCAGCACCACCACTATCAGCGGCAGCAGCAGCAGCAGCAGCATGAGC
GAATGGGCGCCAAGCCCAGTCCAAATAGGGGGGTTACCAACATCAGCACC
AACAGCGGCAACGAGGAGGAAGAGGAGGAGGAAGAGCAGGAGGAGGAGGG
GAGAAAGAGGGATGACGTGGAGCACCTCGTCGTCGCCACTGCTCTTCAGA
AGCTTCAGGAGTCTTCCCCTCCCTCTGCTAGCTCTCCCTCTTCCGACCTT
CTCTCCTCTTCCCCACCCTCCCTCGGCACCACCATCCCCGGCAGCATAAA
CGATGCTCGAGAAGGACATAACATCACCCACGGCAACCACCACCACCACC
ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGTTGCGATAGGATTGAGGACGTGGTCATTTCCTGCCT
CAGCGACGCTCATCAGATTGTGTCCGACTTTTCGACTGCTACTTCCGCCT
CGGGCGAAACCAAGgttagtcctccctccctccctccctccctttcttta
tttgctttctttttcccccacctctagtctcattgcctattccttcttcc
ttccctccctcactccctccctacagAACCCCACAAAAGCGCTGTCAAAC
TCATCCTCCTCTTCTTACCTTCGAGATATGAATGAAGAGAGCGGGATAGA
AGGCACCACCGACAACCTCAGTCGACGAGAATCGCACTCCCTCCTTCCCT
CCCTCCCTCCCTTTTCGGAAGAGCAGGAGACAATAAGGCTGTAAAAAGTT
GAAGGAGGGAGGTAGAGAAGATAGGAGGGAGGGCGGGAGGGTTGATAGCA
TCATGTACAGTTGTGGCCGCTGAGTGGTTTGGGCCGGAGAGGAGGAAGGA
AGGGAGAAGGAGATTTCTGGAGGAAGTGTTCATGTTTAGTAAAGAGTAGT
AGTAGTAGTGAGGAGGAGGACGACGACGACGAGGACGACGACGAGAAGGA
GGCGATAGGGATAGGGATAATATAATAATTGACAGTGCAACCATACAGGC
GTAAAGCTTACTGGCAGAAGAGGGAAGATAAGACGCTCACATACCGTAAT
TTGCGCGACACAAGCAGCAGCAGCCCCAACAGAGAGAAAGTAGACGTTGG
AGAAAATTATCGAAGATCAGCACTTTCGATGAAAAGAAGGAAAGGGACGA
GGACTGAACATAAAAATAGGGGTAGACGAATGAAGGAGACTGGGGAGATA
AAGAGTACTTCTAGAGAAACCTTCACATCTTCGGAACTACTCGGCTAAGT
ACCTGGATGCGAAAGAGAAAAACGAGAAACGAAAAACAAAAACAAGAACA
TCTACGAAAACTTGAAGCAAAGCAAGAACAAGAACAAGAGGATCAAGGAG
ATCAGTAAGACCAAAGAGAAGTAATAAGGGGGAGGGAAGGATGGGAGGAA
GAACAAATTCAGCACGAAGGAAAAGCGTCCTTTTGCCCCTTAACCACAAG
AGCAAAAGTTGCACGCAGTAGCAGCAACCGCAGTAGCAGCAGCAGCAGCA
ACAGCAACCGCAGCAGCAGCAGCAGCAACATGAACAGCAACAGTTAAATT
GCATGCTCTCCATGAATTCGGATGAACCCTCTAAGCAAGACAAACCCAAT
GACCCAGAGATTGAGAGAAAGTAGAAGACAAACTAGCGGGCAATGCATAT
GAAGGGGGGAGTTCCCGAAGCCGCCAACGAGCCCACGTATAACACAGAAA
GAGAAACTAAGATTTACTGTTTAGACACGC
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protein sequence of NO26G00230.1

>NO26G00230.1-protein ID=NO26G00230.1-protein|Name=NO26G00230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1043bp
MADIIEKRTCMACRKSKVRCSKDVPCTRCLRLGLNCVEQVRGRGRPLVSY
MLAPAHGTGTDSDCHNSDLDSSLHSDCSSLPPHSHSSLPPSSPHITHPPP
FASASVSSVDGRGGGGGGQAHWQQQQQQQQQQQQEGELGLVHHEPQLHQQ
RSYQQSLDHQQQQQQQQQQGSSSSTLPALHEFFLDPMRTANINRRKLLIV
LRAWGMLAAKTLTKSTSSFPPSFPPHHPPGGMNLSGVNGQFFRILQGVAS
TFGLDLQDVLHLEPEVYAALCEGNGRNERRGTAGGAPREVPMYIKALDCE
AFAVSRRVLCQGESSYTCNEVFSSMFATKAMAERSPERATGIDIWLGCID
SEDRKEFLHSFLSTLLASPSPCTETAGIFKCKDKNGRVIATHLRLRSYYS
QAGDYVAYSLFLAPLPPVRLGSLLAPPAHAPTLLPHPRQMASHIPPSSSS
SSSIASLTSVTGPFVPSLSPSSFGAMPSPGASPLPLHHHPCGGEGGGEGG
GVNCTNSNNSSLRNTNYHHPPQQQQQQQPQQQPQQPQQPQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQRHYQGEGMANRGGLGGQQPLRPVFRVAAPPL
EGGDNVHQQHQQHQQPFSSHHNHHHHQQQQQQRLEESEERPRADSLSSIS
TIGSVTSDNSPYSHHHQQQQQQQQQQQHHDHHSSYQQPPQHHQQHQQQQS
YYDPHPPSITPAPGGLSLLPSSYSYPHPSSLPAPPSSPVENSFPSALPPP
LSGPGPSFPGRHSPLTTPYITTAPSAASRSSSSSSNNKKRPRPSHSSSKS
VEEEEGREGDHHYHQQQQHHHYQRQQQQQQHERMGAKPSPNRGVTNISTN
SGNEEEEEEEEQEEEGRKRDDVEHLVVATALQKLQESSPPSASSPSSDLL
SSSPPSLGTTIPGSINDAREGHNITHGNHHHHHSSSSSSSSSSSSSSSSS
SSSSCDRIEDVVISCLSDAHQIVSDFSTATSASGETKNPTKALSNSSSSS
YLRDMNEESGIEGTTDNLSRRESHSLLPSLPPFSEEQETIRL*
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Synonyms
Publications