NO26G00080, NO26G00080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00080 vs. NCBI_GenBank
Match: EWM29954.1 (ring-finger-containing e3 ubiquitin [Nannochloropsis gaditana]) HSP 1 Score: 136.7 bits (343), Expect = 3.500e-28 Identity = 73/243 (30.04%), Postives = 113/243 (46.50%), Query Frame = 0 Query: 526 FCNIC--LSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPC------PMLGQDG---------CGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDG----HYEVYNIF-GCPGAQFSRLGDVPFPGFV 747 FC +C + + R+ GAC H +C+ C Y+ IS + C G++G C E D+ LV +TW KY++F + R C P C G PA++C C FC+FH++AHP+ SC +Y +++ +++ + I++ CP C P EK+GGCN + C C WCWLCG +G H++ +N+ GCP Q + P P + Sbjct: 212 FCQVCREYERVSKTYRL-----GACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMC--PFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHI 447
BLAST of NO26G00080 vs. NCBI_GenBank
Match: XP_001432554.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK65157.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 135.2 bits (339), Expect = 1.000e-27 Identity = 87/257 (33.85%), Postives = 125/257 (48.64%), Query Frame = 0 Query: 505 WGALWTLLVKPVQQMSPQPTF-FCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGV-SIPCPMLGQDGCGYSYSEQDIKLLVDGDTWRKYQKFC---LMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNA-HPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDGHYEVYNIFGC--PGAQFSRLGDVPFPGFVVCLVVIP 754 W + L +KP +Q C IC + P + + P C H FC DC+ ++ +I V SI CP Q C +++++ IK LV + KY++F ++ Q+ R CPKP C V G + L+C C CF N H +C Q M Q+R+ + CP C AP +K GGCNH+TC C +Q+CWLC YS HY ++N+FGC PG Q S L P + +++IP Sbjct: 116 WQSELRLEIKPEEQSKESKDLQECQICYVDKP---KEQFIAPLNCKHDFCSDCLSQHLTQNILKGNVLSITCP---QTSCTVAFNDEQIKGLVQEKIYEKYKRFYNRQVISQNKNVRWCPKPDCENYVIG-NGNDLLTC-ICGQSICFQCGNQYHKGMNCIQ---AMDAQYLQARKDNLIFD--CPSCKAPIQKKGGCNHMTCYKCKYQFCWLCRGKYSSYHYVIFNVFGCVFPGGQGSNLQPFKNPMLLRVMMIIP 359
BLAST of NO26G00080 vs. NCBI_GenBank
Match: OWZ20152.1 (RING-finger-containing E3 ubiquitin ligase [Phytophthora megakarya]) HSP 1 Score: 134.8 bits (338), Expect = 1.300e-27 Identity = 70/226 (30.97%), Postives = 108/226 (47.79%), Query Frame = 0 Query: 519 MSPQPTFFCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPC---PMLGQDGCGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDG----HYEVYNIFGCPGAQFSRL 738 +S + TF C IC P + S C HTFC+ C++ Y+ I V C + C + DI+LLV + W+KY KF ++ + R+CP ++ G +P C C+ FCF HS+AH +C +Y +M + + + IS++CP C EKTGGCN + C C +CW+C D H++ +N+ GC G Q + + Sbjct: 189 LSMEETFLCQICYDYAPVNTSYALS---ICGHTFCETCVKNYLEFKIKEGQVYPKCFFEKSEDKTACKADIAVDDIRLLVSEEVWQKYNKFKFNKEHELARQCPYCDHSQICAGSD-NPECVCEACNREFCFVHSSAHQGRTCAEYDKKMIAVEKLNNALISKISKQCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDSVFPEHFQWWNVRGCAGNQMAEI 410
BLAST of NO26G00080 vs. NCBI_GenBank
Match: XP_001423619.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK56221.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 134.0 bits (336), Expect = 2.300e-27 Identity = 83/252 (32.94%), Postives = 123/252 (48.81%), Query Frame = 0 Query: 512 LVKPVQQMSPQPTFF------CNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGV-SIPCPMLGQDGCGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRY---RECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNA-HPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDGHYEVYNIFGCPGAQFSRLGDVPFPGFVVCLVVI 753 +++P Q QP+ F C ICL+ L + + +E C+H FCQ CI Y+ I S V I CP Q GC SE IK ++ + + KYQ+F L++Q + + CP+P C V L C C FCF N HP+ +C + ++ + Q+ + ++CP C A K GGCNH+TC C + +CWLCG Y+ HY+ N CPG Q+ +P ++C+ I Sbjct: 85 IIEPHQIQIRQPSPFQLNKQTCQICLNELSNIIIIEQ-----CNHQFCQKCITLYLYNKIISGEVQKITCP---QFGCCTVLSELLIKQNINQEVYLKYQRFLLIKQYEHVVNGKWCPRPDCFNFVFQQGQEKILQC-SCGQQFCFDCGNPNHPNKTCQESVDQVFAQALQNYKI-----QKCPNCKANILKNGGCNHMTCTKCHYDFCWLCGCRYTSIHYDWMNPCNCPGEQYQERDPYAYPKILICIRAI 322
BLAST of NO26G00080 vs. NCBI_GenBank
Match: XP_009519281.1 (hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae] >EGZ23993.1 hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae]) HSP 1 Score: 133.3 bits (334), Expect = 3.900e-27 Identity = 72/224 (32.14%), Postives = 103/224 (45.98%), Query Frame = 0 Query: 519 MSPQPTFFCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPCPMLGQD---GCGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDG----HYEVYNIFGCPGAQFS 736 +S + TF C IC P S +G C HTFC+ C++ Y+ I V C D C DI+ LV + W+KY KF ++ + R+CP ++ G P C C FCF HSNAH +C +Y +M + + + IS+ CP C EKTGGCN + C C +CW+C D H++ +N+ GC G Q + Sbjct: 198 LSMEETFLCQICYDYAPVSTSYALTG---CGHTFCEACLKNYLEFKIKEGQVYPKCFFENSDDKAACKADIVVDDIQSLVSDEVWQKYNKFKFNKEHELARQCPYCDHSQICAGSD-HPECVCEACSREFCFVHSNAHQGRTCAEYDKQMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDSVFPEHFQWWNVRGCAGNQMA 417
BLAST of NO26G00080 vs. NCBI_GenBank
Match: XP_001459281.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK91884.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 131.7 bits (330), Expect = 1.100e-26 Identity = 75/222 (33.78%), Postives = 112/222 (50.45%), Query Frame = 0 Query: 527 CNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASIS-SRGVSIPCPMLGQDGCGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDR---YRECPKPGCGRMVRG-CRCSPALSCPDCHTHFCF-FHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDGHYEVYNIFGCPGAQFSRLGDVPF 743 C ICL + + + C H FC +C++ Y+ I + + I CP Q GC ++++ IK LV+ + ++KY KF + DR R C KPGC + ++G S + C +C C+ HP +C L+ D + + +RCP+C AP +K GCNH+TC C Q+CWLC A Y+ H++ N FGCP QFS D P+ Sbjct: 179 CGICLGEYINKQKALN-----CRHEFCYECLQNYLDNKIKIGQVLEIECP---QQGCDNYFNDEAIKSLVNDEQYQKYDKFKKQKLLDRDETVRWCIKPGCDKFIKGKSMFSNTIKC-ECGQEMCYECRREDHPGMTC---ELQEALDKYYEQTMKQLVIQRCPKCKAPIQKKEGCNHMTCYQCRFQFCWLCRAKYTRMHFDQDNCFGCPDKQFS--SDEPY 386
BLAST of NO26G00080 vs. NCBI_GenBank
Match: ETI50061.1 (hypothetical protein F443_06310 [Phytophthora parasitica P1569] >ETL43359.1 hypothetical protein L916_06122 [Phytophthora parasitica] >ETP19832.1 hypothetical protein F441_06317 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 130.6 bits (327), Expect = 2.500e-26 Identity = 72/224 (32.14%), Postives = 105/224 (46.88%), Query Frame = 0 Query: 519 MSPQPTFFCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPCPMLGQD---GCGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSD----GHYEVYNIFGCPGAQFS 736 +S + TF C IC S+ + G C HTFC+ C+R Y+ I V C + C S DI+ LV + W+KY KF ++ + R+CP ++ G P C C+ FCF HSNAH +C +Y +M + + + IS+ CP C EKTGGCN + C C +CW+C D H++ +N+ GC G Q + Sbjct: 241 LSMEETFLCQICYDYA--SVNTSY-GLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSD-HPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQMA 460
BLAST of NO26G00080 vs. NCBI_GenBank
Match: ETK89961.1 (hypothetical protein L915_06184 [Phytophthora parasitica]) HSP 1 Score: 130.6 bits (327), Expect = 2.500e-26 Identity = 72/224 (32.14%), Postives = 105/224 (46.88%), Query Frame = 0 Query: 519 MSPQPTFFCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPCPMLGQD---GCGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSD----GHYEVYNIFGCPGAQFS 736 +S + TF C IC S+ + G C HTFC+ C+R Y+ I V C + C S DI+ LV + W+KY KF ++ + R+CP ++ G P C C+ FCF HSNAH +C +Y +M + + + IS+ CP C EKTGGCN + C C +CW+C D H++ +N+ GC G Q + Sbjct: 241 LSMEETFLCQICYDYA--SVNTSY-GLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSD-HPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQMA 460
BLAST of NO26G00080 vs. NCBI_GenBank
Match: XP_008891750.1 (hypothetical protein PPTG_02428 [Phytophthora parasitica INRA-310] >ETL96543.1 hypothetical protein L917_06000 [Phytophthora parasitica] >ETM49697.1 hypothetical protein L914_06120 [Phytophthora parasitica] >ETN22503.1 hypothetical protein PPTG_02428 [Phytophthora parasitica INRA-310] >ETO78763.1 hypothetical protein F444_06373 [Phytophthora parasitica P1976]) HSP 1 Score: 130.6 bits (327), Expect = 2.500e-26 Identity = 72/224 (32.14%), Postives = 105/224 (46.88%), Query Frame = 0 Query: 519 MSPQPTFFCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPCPMLGQD---GCGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSD----GHYEVYNIFGCPGAQFS 736 +S + TF C IC S+ + G C HTFC+ C+R Y+ I V C + C S DI+ LV + W+KY KF ++ + R+CP ++ G P C C+ FCF HSNAH +C +Y +M + + + IS+ CP C EKTGGCN + C C +CW+C D H++ +N+ GC G Q + Sbjct: 241 LSMEETFLCQICYDYA--SVNTSY-GLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSD-HPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQMA 460
BLAST of NO26G00080 vs. NCBI_GenBank
Match: ETP47744.1 (hypothetical protein F442_06353 [Phytophthora parasitica P10297]) HSP 1 Score: 130.6 bits (327), Expect = 2.500e-26 Identity = 72/224 (32.14%), Postives = 105/224 (46.88%), Query Frame = 0 Query: 519 MSPQPTFFCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPCPMLGQD---GCGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSD----GHYEVYNIFGCPGAQFS 736 +S + TF C IC S+ + G C HTFC+ C+R Y+ I V C + C S DI+ LV + W+KY KF ++ + R+CP ++ G P C C+ FCF HSNAH +C +Y +M + + + IS+ CP C EKTGGCN + C C +CW+C D H++ +N+ GC G Q + Sbjct: 241 LSMEETFLCQICYDYA--SVNTSY-GLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSD-HPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQMA 460 The following BLAST results are available for this feature:
BLAST of NO26G00080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00080 ID=NO26G00080|Name=NO26G00080|organism=Nannochloropsis oceanica|type=gene|length=5268bpback to top protein sequence of NO26G00080.1 >NO26G00080.1-protein ID=NO26G00080.1-protein|Name=NO26G00080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=902bpback to top protein sequence of NO26G00080.2 >NO26G00080.2-protein ID=NO26G00080.2-protein|Name=NO26G00080.2|organism=Nannochloropsis oceanica|type=polypeptide|length=878bpback to top Synonyms
Publications
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