NO26G00050, NO26G00050 (gene) Nannochloropsis oceanica

Overview
NameNO26G00050
Unique NameNO26G00050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2861
Alignment locationchr26:10855..13715 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:10855..13715 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO26G00050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR086ncniR086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00050.1NO26G00050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|612245gene_10632Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00050.1NO26G00050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00050 ID=NO26G00050|Name=NO26G00050|organism=Nannochloropsis oceanica|type=gene|length=2861bp
CCCCCACCATCTGCTACGCACCCCCGTCTTTCTATCTTCTGTTTCCTCGT
CCCTCTCTCCTGTCCTTTCCCTGCACTGGTAATAGTGCGCGTGTCCTGCG
ACCCGAAGCACTGGAGTTAGCTACCTGACCTGCTTCATCCATTGAGCCAT
CCCATCTCTGCCTGGCAAGTTGCAACCGTCAAAAGCGGGCGTTGCGCGCT
TTCTTCTTTTTCTCCACAGCCCCCTTCGTCCTCATTTTCTCTGTCTTCCT
TCCACACACACACAGCACACGCTATCTCTGCACGCACGCTTCAGAAAAAC
GTGCCCAAACCAGTAGCTAGGCCCAATGACAAGCTCCAATAAAACTGGCT
GTGGCCGTGCGAAGAAGCCAGCCACGAAAATGGTCAAGACCCAAAGCAAG
AAGGGCAGCAGCAGCAGCAGCAGCAGCAGCAAAGCCAAGGGCAAAGGAAA
AGGCAAGCAAAACAAAGAGAACCAAAAACGTAAAGCCACTTCCTCCTCCT
ACGCCTCCTTGGCCAAGAAATTCAAAATCTCCTCCTCCGCCTCCTCGGGT
CCAGTCGACCTGTCCCCTTCCCTCTCCCGCGCCACCGATCCCTCCTCCCC
CCCCACCCTCCTCGCCCTCACACTCCGGCCCGAAGTGGTCGCCCTCGGAC
TTTTCCTATGGCTTCACCGCACCACACTCCGCCTCGGCTCTTCTAAGGAG
TTTCCCCTTTCCCTCTGTGCCTTGGAGGAGTCCTTCTTGGCGCCCCAAGA
GAGCACCCTGCTCGCCACGATTATGTCGCGTTTGCTCATGAAGCCCGCGC
AACGGCAGCGACTCACAGGCCCTCTCCAGCAAGTGCTGCCCTTTTCCAAG
TGGGCCAAGgtacaagaagaacggagggagggagtgaaggaggcggggaa
ggcaggaaggagggaaggcaggaaggaggaaagaaagcattgccacgcat
ataaaacatcgcacacaaccagtctcatatacctaccccccattcccccc
cccccttgccctccttcctttcttccttttctccctccctccctttctct
tcagCTGCTCCAAGACCGCATCTGGGATATATACGAGCGTCTGAGGATCA
TGCGCATTATCCTGCTGGAACGCGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAAGGAGAAGTAGAAAAGGAAGAGGAAGG
AGGAGAAGAGGAGAAGAGGAAAAGAGGAGGAGCAGATGGAGGAGAAAGAG
CAGCAGCAGCAGCAACAGCAGCAGCAGCAGCCCCTCCCTCGGATCTGGAG
AAACAGATGCGTCGCGCATGGGCCGCCCGGTCATGGGAGGAGTGCGAGGA
GGAGGAGGAGCGCCTGGAGGTGCTGCTCCGAAATGTGGACCCCGAGCTGT
GGGAAAACAAGATCGCCGCCCTTGTCTGTCCCTTGGGGGTGGGGGAGGGG
GAGAGGAAGGGTGGGAGGAAGGCTGTGAAGGGAGAGGTGGAGGAGCACGG
CTTGGTGCCCATGCAATCACCTCCTTCCTCCCTGCCTTCCTCTCTCCCTT
CCGCCTCTCCGCTTTCGACCAGTCCCACCACTACTACGGTAACTCTCAAC
GACGGTCTGGCTCCTCATTCCCATTCTTCCCTCCCTCCCTCCCTCCCCCC
CTCCCTCCTTCCCTCCGACGCCCTGCCTCCTTCTCCTCAGCTTCCTGTAT
CCACGCAACCCCGCTGTCCTCCCTCCCCCCCTCCTTTCCCCCTTCTCTCC
TCCATCGAAACCCACCGAGACCCCCACGCCCTGGACTGGCAACAAGCCGA
GGCCCGAGAGGAGGACAGGGCGAAGGAGGCAAGGGCAGCCGCCGCCTATC
TCTCCCTCCACCCCGTCCTCCGCCTCCACCTCACCCTGGCACTGTGCGAG
AGTCTTCTTGACGAGGAGCTGAAGGAGGGTAAGGGTGGGAGGGAGGGAGG
GCTGGTGGCTGCAATGGAGGGGGTGGAGGCGGCCGACTTGAGAGGGGAGG
AGGTAGGGAGGGACAGCAGGGGCAGGAGCTACTACGTCTTCCCGCAATTC
TACGAAGACTGCCGCGTCTTCCGCACAGCGGCCTCGGGGGGGGCTGGAGT
GACGAAGGGAGGGAGGAAGGGGTCGACGGAGGAGAAGGGAGAGGGCAAGG
GGGAGGAGGGGAAAAAGAACGAGGAGGGGGAGGGAGGGGGAGGGGGAGAG
GGACAGGAGGAAGCGAAGGGTGAGTCGCCCGCTGCTGATCCTGCGGGTGC
TAGTGAACCTTCCCATCTGCAATCACAAGATCCTCCATTCTCGGTCCTTC
CCCGTTTCCGAAAAGAGAGGACGCCCGTCGGAGGGATGCTTGAGTGTGCG
GCAGACTCCCTTCCCTCCCTCCTCGCCTTGGTGGCCAAGCTGAACAAGAG
CAGGTGGAGGGCGGACGGGGAGCTGAGCGAGATGCTTGGAGCCATTGCGC
AGGGCGTGATGGAGGAGCTGGAGAAGAGGGCAGCCAAGGAGGAGGGGTTG
AGGAGGAGGGAGGAGAAGGCACGGTTGCTGGAGCAGCTGCCGCGGAGAAG
GAGTAGGAGATTGGGGGAGGGGGAAGGGGAGGAGGAAAACAGGCGCCGAG
GAGGAGGAGGGGAAGAGGACGGAGAGAAAAGACTCGGAGGGAAACGAGTG
GATGAGGAGGGGAGAAATAGAGAGGGGGGTAGGGATGAAGGAGGACGGAA
AGAGGAGGGCGATATGTACTTTTAGAGTCTGCTCACTGTGTGGAAAGAAG
AGGGAGACGAGGTCCGAGACGAAGAGTAGGTAAAATGCTGGATGACTACT
CGAAGAAGAAAGGATAACAATCAAGCAAGCATAAATAAGTGACAAAGAAA
AATACAGGCCC
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protein sequence of NO26G00050.1

>NO26G00050.1-protein ID=NO26G00050.1-protein|Name=NO26G00050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=735bp
MTSSNKTGCGRAKKPATKMVKTQSKKGSSSSSSSSKAKGKGKGKQNKENQ
KRKATSSSYASLAKKFKISSSASSGPVDLSPSLSRATDPSSPPTLLALTL
RPEVVALGLFLWLHRTTLRLGSSKEFPLSLCALEESFLAPQESTLLATIM
SRLLMKPAQRQRLTGPLQQVLPFSKWAKLLQDRIWDIYERLRIMRIILLE
REEEEEEEEEEEEEEEEEGEVEKEEEGGEEEKRKRGGADGGERAAAAATA
AAAAPPSDLEKQMRRAWAARSWEECEEEEERLEVLLRNVDPELWENKIAA
LVCPLGVGEGERKGGRKAVKGEVEEHGLVPMQSPPSSLPSSLPSASPLST
SPTTTTVTLNDGLAPHSHSSLPPSLPPSLLPSDALPPSPQLPVSTQPRCP
PSPPPFPLLSSIETHRDPHALDWQQAEAREEDRAKEARAAAAYLSLHPVL
RLHLTLALCESLLDEELKEGKGGREGGLVAAMEGVEAADLRGEEVGRDSR
GRSYYVFPQFYEDCRVFRTAASGGAGVTKGGRKGSTEEKGEGKGEEGKKN
EEGEGGGGGEGQEEAKGESPAADPAGASEPSHLQSQDPPFSVLPRFRKER
TPVGGMLECAADSLPSLLALVAKLNKSRWRADGELSEMLGAIAQGVMEEL
EKRAAKEEGLRRREEKARLLEQLPRRRSRRLGEGEGEEENRRRGGGGEED
GEKRLGGKRVDEEGRNREGGRDEGGRKEEGDMYF*
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Synonyms
Publications