NO25G02000, NO25G02000 (gene) Nannochloropsis oceanica

Overview
NameNO25G02000
Unique NameNO25G02000
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length983
Alignment locationchr25:621013..621995 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:621013..621995 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G02000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL047nonsL047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G02000.1NO25G02000.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|568828gene_8821Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G02000.1NO25G02000.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G02000 ID=NO25G02000|Name=NO25G02000|organism=Nannochloropsis oceanica|type=gene|length=983bp
CTGGGATCTTCCAATCTCTGAATTCCACAGACAGCATATGCCTCGCGTCG
GTGACTCCCTTCCTGGATAGCGTCGATAAGCCCTTTACATCTCATGCTGC
TAGGTGTGTCCGTGTGCGGCTCAGGCTCGCCTCAAGGGCGAGGCGGCGCG
CTTCCAAGACAAAGTGGAAATGTATCGGTACTACGTACAGGTGTTCGGGA
CGCGGGATCACGAGGGCTTGTTGATGGGGTTGGGGGACATTCGGTGCACG
CGATCGCAAAGTGTCCGCGGCATGTTGATCCGTTCGCATGTTTACGTTTT
AATCTTTGTTCTGCGAGCAAGGAACCGTGCCAAGGTATTCACTCATTAGC
ACATCCATACACGCCTACAGGGAAGGGACGCGTGCTGCGGGGGGCGTTTT
CCTCGACAGCCCACACGGGGACTGGCACACACATGCAGTAAGGGGGGCTC
GGATGATACATTTGAAATGGTTTAAAGTATCTGTAGCTGTCTTCGGCTTG
ATGGTCGCAGTTTCTGGCTCTATCGCGTACGGCGTCCATCATTTCGACGA
GAACATGGCAGCGACTGAGATCAAGTATATCGAGGATAAGGCGGCGACGG
AGATCAAGCTGGCAGCGACGGAGATGGTGCGCATCGAGGACATGGCGGCG
ACGGAGATGGTACGTCTCCAGAACAAGGCGGCGACGGACATCGCGCGCAT
CGAGGGCGAGCGAAGGTTGTCGGAAGAGCGTTTGAGGGCGGAGGTGGAGC
TGTACAGATATGATATGCGCGGTCCTAGATCATATTTGTACAACTCCACC
TCCGCCCTCAAACGCTCTTCCGACAACCTTCGCTCGCCCTCGATGCGCGC
GATGTCCGTCGCCGCCTTGTTCTGGAGACGTACCATCTCCGTCGCCGCCA
TGTCCTCGATGCGCACCATCTCCGTCGCCGCCTTATCCTCGATATACTTG
ATCTCAGTCGCTGCCATGTTCCGGTCGAAATGA
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protein sequence of NO25G02000.1

>NO25G02000.1-protein ID=NO25G02000.1-protein|Name=NO25G02000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=177bp
MIHLKWFKVSVAVFGLMVAVSGSIAYGVHHFDENMAATEIKYIEDKAATE
IKLAATEMVRIEDMAATEMVRLQNKAATDIARIEGERRLSEERLRAEVEL
YRYDMRGPRSYLYNSTSALKRSSDNLRSPSMRAMSVAALFWRRTISVAAM
SSMRTISVAALSSIYLISVAAMFRSK*
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Synonyms
Publications