NO25G01930, NO25G01930 (gene) Nannochloropsis oceanica

Overview
NameNO25G01930
Unique NameNO25G01930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3599
Alignment locationchr25:586910..590508 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:586910..590508 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G01930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL047nonsL047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01930.1NO25G01930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01930.1NO25G01930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01930 ID=NO25G01930|Name=NO25G01930|organism=Nannochloropsis oceanica|type=gene|length=3599bp
CCTTGATGCAGCGCCGTGCGAAGCCAAGCCCTCTTTCGCTCCCCAACTTA
ACGATCTTGCACTCTATTCTTTTCCACCCTCACCGCATGCATCACAGAAT
ACGCAAAGGAAAGACTCTCCTGTATCTTATATTGCCATGGCAAGCCGGCG
GATAGTCAGTTTCAGTGCCCGCGTCGTGCTGCTTCTCCTGCCCGCCCTGG
CCTCGTCTGCTTGGCCTGCGGGGTGCAATAAGGACAGCCCTTTCGAGCTT
TATCGCCCCGGTACAGCGACCTATTACACAAACCCTACTTTCTGCGCCGA
TAAGGCGCTCTCGTTTTATGCCTGCGTGGAGCCCGCCGCTTCTCTGACCA
AGGAACAGGTGGTGCACAAGCCCCCGCCTATTGGTGCGGTCGCCCCTCCT
ACCGCACAGAGACACGTACCTTCTCTGCACACCTCTCGGCTCTTTTTCGC
CTTGTCCAGTGCATTCCGCTACTTCGGACTGCTGCTGATCGTGCTGGCAC
TGGTTTGGATGATGGTGGTTGGGGCGATGGCAGGACCTGGTACGGTGGTG
TTGGTCATTGCAGCCGTCGTGATCGTACCTCCAGCCTACATCTGGTCTAT
TCTTTCACAGTGCTGGTGTACACCAATCGAGGTGGAGGAGGAGATTGACG
GGATCAGGATGGTAAAGGTGTGCGGTAGATGGACTGTGGTGGTGAAAGGG
AAGGAGGGATTGGTGGAGGGAGGGGGTGAAGCGTTGGAGGCGCCCTTGCA
GGCCAAGCTTGAATTGGAGGGAGGGAAGAAGGAAGAGGATGGTATGGACA
GAGGGTATGATCAACAAGAGGATCAACAGCAGGAGCGAGTGATCGACATG
GCGGCTGTACTGGTGGCGGTGAGGCGGGAAGCTATGGAGGCGTGGGAAAG
GAGGGGGGAAAGGAGGGAGGAAAACAGGATAGAAGGCGAGAATATGGATG
TGATTAGAGAAGAACAGGAGAAGAATGAGGAGGCTGGTGGGATTGAAGAG
GAGGATAATGCCGTGTCGGATTCCTTAGCTCGTGAGGGAGTTGAAGAGGA
AGGGGAGAACGAAGATGAGGTAGTTGTTAATGAGGAGGAGGCACCTGCCG
CTGCCGCCCTTGCCAACGACAACGACGAGGAGAGCATTGAAGGGGAGGAA
GCGGAGGAAGAATCTGTGACCTCGGCCGCTGATAAAGTCCATGGAGGAGT
AGAACAACAGCAGCAGGAGCAGCAGGAGCAGCAGGAGCAGCAGGAGCAGC
AGGAGCAGCAGGAGCAGCAGGAGCAGCAGGAGCAGCAGGAGCAACAGGAG
CAGCAGGAGCAGCAGGAGCAGCAGGAGCAGCAGGAGCAGCAGGAGCAGCA
GGAGCAACAGGAGCAGCAGGAGCAGCAGGAGCAGCAGGAGCACCAGCTGC
AGCAGCATCAGTCAATCAACAGCTTCTATCTGCCACCCATGCCTACACCT
ACGTGTTTCCACTTACGCCTTCCATCTTTGATATCGGGCTTGCGGTCCGC
GGCCTCCTTATCAGCTTCAAGACTGGTTGCGCTGTCCAAGATTGTGTCCC
GCATGATGGTGGCCAGGAAAGGAGAAAAGAAGAGGACGAGGGAGAGGGAG
GTGGCCGTTCAGGGGGACCAAAAGGGGGAGGAAGGGATGGAGGAAGACCA
GTGGCAAGAGAAGGTGCTATCGAAGGATGGCGAGGAGGAGCTGGACCGAT
TGTGGTCGGGGAGTGGATTTCGAAGACAAAGCTGGCGGCATACTGCACGT
TCAGGGAGCGTGGCCAGTCGTATTCCTCCTACCCTTATAGAGGAGAGAGA
GGAAGAGGAGGAGGAAAATGATGAGGACCGGTTGCGGTCGGAAAGTGGAG
TTCGACGACAGAGCTGGCGGCGTGAGTCGCGTTCAGCAAGCGTTGCCAGC
CGTATTCCTCTTGCCACCAAGGAGCAGGAGGAAGAAGAGAAGGAGGGGGA
GGAGCAAGACCAGCAGCAGCCGCAAAAGCAGATGAGAAGAAAGGAGGTGG
TAATTTCGGCCACCGTTCCCGTCAATTTTCTGCTGCGACGGATATCGTTC
TTTACCAACAAAGAGATTAAGAAGGAGGCGGTATCGGCATCATCAGCAGC
AGCAGTAGCTAGAACAGCAGCAGCGGTAGCTAGAGCAACAGCTGCATCAG
TCACGAAAATTGCGGTGGAGGTGGATGAGGGAGACCACGTAGAGGACGAG
GAGGACGACCAAGTCCTTCCTCCCTACAAGGAGCAGCAGCAGCAGCGCGT
GGTAGTCGAGTCTGCGCCGGCCGAGAAAAAAAGGGGCCTTCGTCATTTTA
TCACCCCGGTGGGTGACGAGGAGGAAGAGGAGGAGGAGGAAATGTTTCCT
TTTTTTTCTCTGTGGCCCACCTCGAGGCCTAAGGAAAGGACGTATTCGCG
AAAACTGCCAGTCTTCACTGAGGGCATGAGTGAGGAAAGAGTGAAACCGC
TCATGCACGAGCATGTTGGAAGCGACAAGGGACTTAAAGAGAAGGAGAGC
CAGCGGTGGCTAGAGGAGAAGTTTGAGGTTAGGCGGCTGGCGCTGCTTGA
AGAGCAGCGTGCTGAGGAGCAGCAGAGTGTGGCTAAGCTTACTCGCAGTC
AGAGCGATCTTGGATACTCAGGCAAGTTTCTGTTGCACGTCCTCACCTCG
CCGTCCTCCTCCTCCTCTCTTACACCTTCGGAGGCGTCGACGGTCGTGTT
CAGCCCGGGCGCCGGCGTGGCACACCTCCATCGGATGGCGCGTCGTCGGA
CTGAAGGCAAGGAGGCGGGGTGTGAATGGGGGGATAGAGACTGGTATGGG
GAACGATTTGGAGTTGGCCTGATGTGGGAGGAGGAAGAAGAAGGCGAGAG
GTTGGAGAAGGAGGAGGGAGGATCGCATTGCTTATATCGATGTGATCATC
GGTTGGCCGTACCCGGCTTATAGAGGGCAAGAAGGTCGAACGAAAGGAGG
ATTGAGAGAGAAAAGCGCTGTGATCCATGTTTGCGATCATTAAAATGATC
TAAATGATGTGCGTAGAAGGAAAAAGGTGGCGTCGACGTGAAGGCTTAAG
TTCGCTGCTCCTTCATCGCTCACGTTCATGGCTGGATGTATTTGGAATGG
TTTGACTGTTAATTGTAAGAGAAGACGTTAGCACAAGGGTGGAAAGGAAA
GGGTCGGAAGGGATATATATATATACATAAAATGTATATATGCACGACAA
GCTTTACAAACGAAGAGCACCTTATCTCTACAACCGAGCCTGTCCTTAAC
GGCAAGAAGGAGGGAAGTACTGCTGTAGATGGGATTCTGACTCAAATGCA
AGAAGAAAAGCAAAAAGTGAGAGAAACCGAGAAAGGGAAGACATGCACAC
ATATACATATATACAAATACACACTTACACGCACAAGTAAGACCTGTGTG
GGTTAGCAATTGAGTAAGCGAGAAGGCAGAGAGAAGGAATATTCGGGAGG
TGGGAGTGGAAAAATGTGAGAGAAGGAGAAAATATGGATTACGAAGAGTG
AGGGTAGGAGAAATTGAGAGCAAAAGAGAGTCTCAGTCCCCTTGGGAGGA
GAGCTCCCGCGAAGAAAAAAGAGAAGAACCTGCATATCAAAAACGAGCG
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protein sequence of NO25G01930.1

>NO25G01930.1-protein ID=NO25G01930.1-protein|Name=NO25G01930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=929bp
MASRRIVSFSARVVLLLLPALASSAWPAGCNKDSPFELYRPGTATYYTNP
TFCADKALSFYACVEPAASLTKEQVVHKPPPIGAVAPPTAQRHVPSLHTS
RLFFALSSAFRYFGLLLIVLALVWMMVVGAMAGPGTVVLVIAAVVIVPPA
YIWSILSQCWCTPIEVEEEIDGIRMVKVCGRWTVVVKGKEGLVEGGGEAL
EAPLQAKLELEGGKKEEDGMDRGYDQQEDQQQERVIDMAAVLVAVRREAM
EAWERRGERREENRIEGENMDVIREEQEKNEEAGGIEEEDNAVSDSLARE
GVEEEGENEDEVVVNEEEAPAAAALANDNDEESIEGEEAEEESVTSAADK
VHGGVEQQQQEQQEQQEQQEQQEQQEQQEQQEQQEQQEQQEQQEQQEQQE
QQEQQEQQEQQEQQEQQEHQLQQHQSINSFYLPPMPTPTCFHLRLPSLIS
GLRSAASLSASRLVALSKIVSRMMVARKGEKKRTREREVAVQGDQKGEEG
MEEDQWQEKVLSKDGEEELDRLWSGSGFRRQSWRHTARSGSVASRIPPTL
IEEREEEEEENDEDRLRSESGVRRQSWRRESRSASVASRIPLATKEQEEE
EKEGEEQDQQQPQKQMRRKEVVISATVPVNFLLRRISFFTNKEIKKEAVS
ASSAAAVARTAAAVARATAASVTKIAVEVDEGDHVEDEEDDQVLPPYKEQ
QQQRVVVESAPAEKKRGLRHFITPVGDEEEEEEEEMFPFFSLWPTSRPKE
RTYSRKLPVFTEGMSEERVKPLMHEHVGSDKGLKEKESQRWLEEKFEVRR
LALLEEQRAEEQQSVAKLTRSQSDLGYSGKFLLHVLTSPSSSSSLTPSEA
STVVFSPGAGVAHLHRMARRRTEGKEAGCEWGDRDWYGERFGVGLMWEEE
EEGERLEKEEGGSHCLYRCDHRLAVPGL*
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Synonyms
Publications