NO25G01900, NO25G01900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G01900 vs. NCBI_GenBank
Match: EWM21702.1 (Protein of unknown function DUF2237 [Nannochloropsis gaditana]) HSP 1 Score: 321.2 bits (822), Expect = 2.900e-84 Identity = 164/230 (71.30%), Postives = 186/230 (80.87%), Query Frame = 0 Query: 1 MIPCSRRAATASSFTILVSLAFASSRFFRPAQAFLVFRPASSPFNLLVAAATPTGPGKE-GSNASPQPAFIRSLFTDVEERRKKEQASISENVQANAAERLQEAKMRGEINVLGGPLELCSTDPMTGFTREGCCTTGPMDLGSHTVCAVVTEDFLRYSKSRGNDLMTPRPDFSFPGLKSGDKWCLCASRWAEAYDEGVACSVLLKSTHIKALDVCDLSALIEHALDPPAS 230 M PC+R+ A SFT + SL SS R A FL R AS+ FN+ VA ATP+G E + Q AF+RSLFTDV ERR KEQASI +A AA+RL+ AKMRGEINVLGGPLELC TDPMTGFTREGCCTTGPMDLGSHTVCAVV++DFLRYSK+RGNDLMTPRP++SFPGLK GD+WCLCASRWAEAYDEGVAC+V LK+THIKALDVC+L+ALIEHAL+PP S Sbjct: 1 MRPCARK-ADIKSFTTIASLFLLSSLSTRSAYGFLALRQASASFNVCVAGATPSGKADEKPTPPQGQSAFVRSLFTDVAERRDKEQASIKAEAKAAAAQRLEAAKMRGEINVLGGPLELCGTDPMTGFTREGCCTTGPMDLGSHTVCAVVSDDFLRYSKARGNDLMTPRPEYSFPGLKPGDRWCLCASRWAEAYDEGVACAVDLKATHIKALDVCNLNALIEHALEPPPS 229
BLAST of NO25G01900 vs. NCBI_GenBank
Match: WP_091504744.1 (DUF2237 domain-containing protein [Amycolatopsis sacchari] >SFI99953.1 hypothetical protein SAMN05421835_102457 [Amycolatopsis sacchari]) HSP 1 Score: 178.7 bits (452), Expect = 2.400e-41 Identity = 81/124 (65.32%), Postives = 98/124 (79.03%), Query Frame = 0 Query: 105 MRGEINVLGGPLELCSTDPMTGFTREGCCTTGPMDLGSHTVCAVVTEDFLRYSKSRGNDLMTPRPDFSFPGLKSGDKWCLCASRWAEAYDEGVACSVLLKSTHIKALDVCDLSALIEHALDPPA 229 M + NVLGG LE C +DP+TGF REGCCTTGP DLG+HTVCAVVT++FL YS GNDL+TPRP++ FPGL++GD+WC+ A+RW EAY+ GVA V L STH +AL+V DL AL EHA D PA Sbjct: 1 MANDRNVLGGELEPCGSDPVTGFYREGCCTTGPDDLGNHTVCAVVTKEFLEYSLKVGNDLLTPRPEYDFPGLQAGDRWCIVAARWQEAYEAGVAPPVALASTHERALEVVDLDALREHAADVPA 124
BLAST of NO25G01900 vs. NCBI_GenBank
Match: WP_091851871.1 (DUF2237 domain-containing protein [Marinobacter segnicrescens] >SET45163.1 hypothetical protein SAMN04487962_1104 [Marinobacter segnicrescens]) HSP 1 Score: 176.8 bits (447), Expect = 9.000e-41 Identity = 78/117 (66.67%), Postives = 93/117 (79.49%), Query Frame = 0 Query: 109 INVLGGPLELCSTDPMTGFTREGCCTTGPMDLGSHTVCAVVTEDFLRYSKSRGNDLMTPRPDFSFPGLKSGDKWCLCASRWAEAYDEGVACSVLLKSTHIKALDVCDLSALIEHALD 226 INVLG PLE C TDP+TGF R+GCC TGP D GSHTVCAVVT++FL +S+SRGNDL TPRP+F FPGL+ GD WCLCA+RW EA + G A V LK+TH ALD+CDL+ L H++D Sbjct: 9 INVLGEPLEDCGTDPVTGFFRDGCCNTGPEDFGSHTVCAVVTDEFLAFSRSRGNDLSTPRPEFGFPGLRPGDGWCLCAARWREALEAGCAPRVRLKATHRAALDICDLADLKRHSVD 125
BLAST of NO25G01900 vs. NCBI_GenBank
Match: OLB79803.1 (hypothetical protein AUI14_09155 [Actinobacteria bacterium 13_2_20CM_2_71_6]) HSP 1 Score: 176.4 bits (446), Expect = 1.200e-40 Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 0 Query: 105 MRGEINVLGGPLELCSTDPMTGFTREGCCTTGPMDLGSHTVCAVVTEDFLRYSKSRGNDLMTPRPDFSFPGLKSGDKWCLCASRWAEAYDEGVACSVLLKSTHIKALDVCDLSALIEHALDPPA 229 M G+ NVLGG LE C TDP+TGF R+GCC+TGP DLGSHTVCAVVT +FL + + GNDL+TPRP+F FPGL+ GD+WC+ A RW EAY+ GVA V+L +TH +A+D+ L AL EHA+D PA Sbjct: 1 MTGDRNVLGGELEPCGTDPVTGFYRDGCCSTGPEDLGSHTVCAVVTAEFLAHQRRTGNDLITPRPEFRFPGLQPGDRWCVVAIRWLEAYEAGVAAPVVLAATHARAVDIVPLEALREHAVDVPA 124
BLAST of NO25G01900 vs. NCBI_GenBank
Match: WP_044883107.1 (MULTISPECIES: DUF2237 domain-containing protein [Frankia] >KJE25164.1 hypothetical protein FF36_00297 [Frankia sp. CpI1-S] >KQC37712.1 hypothetical protein UK82_13865 [Frankia sp. ACN1ag] >KQM08020.1 hypothetical protein FF86_1001276 [Frankia sp. CpI1-P]) HSP 1 Score: 175.3 bits (443), Expect = 2.600e-40 Identity = 80/124 (64.52%), Postives = 95/124 (76.61%), Query Frame = 0 Query: 105 MRGEINVLGGPLELCSTDPMTGFTREGCCTTGPMDLGSHTVCAVVTEDFLRYSKSRGNDLMTPRPDFSFPGLKSGDKWCLCASRWAEAYDEGVACSVLLKSTHIKALDVCDLSALIEHALDPPA 229 M E NVLGG LE C TDP+TGF R+GCC+TGP DLGSHTVCAVVT DFLR+ + GNDL TPRP++SFPGL+ GD+WC+ A RW +AYD G A V+L STH +AL+V L AL HA+D PA Sbjct: 1 MAEERNVLGGELEPCGTDPVTGFYRDGCCSTGPEDLGSHTVCAVVTADFLRHQRQVGNDLSTPRPEYSFPGLRPGDRWCVVAVRWLQAYDAGAAAPVVLASTHERALEVIPLEALRAHAVDVPA 124
BLAST of NO25G01900 vs. NCBI_GenBank
Match: WP_085949675.1 (MULTISPECIES: DUF2237 domain-containing protein [Frankia]) HSP 1 Score: 175.3 bits (443), Expect = 2.600e-40 Identity = 80/124 (64.52%), Postives = 96/124 (77.42%), Query Frame = 0 Query: 105 MRGEINVLGGPLELCSTDPMTGFTREGCCTTGPMDLGSHTVCAVVTEDFLRYSKSRGNDLMTPRPDFSFPGLKSGDKWCLCASRWAEAYDEGVACSVLLKSTHIKALDVCDLSALIEHALDPPA 229 M E NVLGG LE C TDP+TGF R+GCC+TGP DLG+HTVCAVVT DFLR+ + GNDL TPRP++SFPGL+ GD+WC+ A RW +AYD GVA V+L STH +AL+V L AL HA+D PA Sbjct: 1 MAVERNVLGGELEPCGTDPVTGFYRDGCCSTGPEDLGNHTVCAVVTADFLRHQRQVGNDLSTPRPEYSFPGLRPGDRWCVVAVRWLQAYDAGVAAPVVLASTHERALEVIPLEALRAHAVDVPA 124
BLAST of NO25G01900 vs. NCBI_GenBank
Match: CAJ62447.1 (conserved hypothetical protein [Frankia alni ACN14a]) HSP 1 Score: 174.9 bits (442), Expect = 3.400e-40 Identity = 79/121 (65.29%), Postives = 95/121 (78.51%), Query Frame = 0 Query: 108 EINVLGGPLELCSTDPMTGFTREGCCTTGPMDLGSHTVCAVVTEDFLRYSKSRGNDLMTPRPDFSFPGLKSGDKWCLCASRWAEAYDEGVACSVLLKSTHIKALDVCDLSALIEHALDPPA 229 E NVLGG LE C TDP+TGF R+GCC+TGP DLG+HTVCAVVT DFLR+ + GNDL TPRP++SFPGL+ GD+WC+ A RW +AYD GVA V+L STH +AL+V L AL HA+D PA Sbjct: 2 ERNVLGGELEPCGTDPVTGFYRDGCCSTGPEDLGNHTVCAVVTADFLRHQRQVGNDLSTPRPEYSFPGLRPGDRWCVVAVRWLQAYDAGVAAPVVLASTHERALEVIPLEALRAHAVDVPA 122
BLAST of NO25G01900 vs. NCBI_GenBank
Match: WP_045875229.1 (DUF2237 domain-containing protein [Frankia sp. DC12]) HSP 1 Score: 174.9 bits (442), Expect = 3.400e-40 Identity = 78/124 (62.90%), Postives = 99/124 (79.84%), Query Frame = 0 Query: 105 MRGEINVLGGPLELCSTDPMTGFTREGCCTTGPMDLGSHTVCAVVTEDFLRYSKSRGNDLMTPRPDFSFPGLKSGDKWCLCASRWAEAYDEGVACSVLLKSTHIKALDVCDLSALIEHALDPPA 229 M E NVLGGPLE C TDPMTGF+R+GCCT+GP DLGSHTVCAVVT++FL + + GNDL TPRP+++FPGL+ GD+WC+ A+RW +AY GVA V+L ST+ +AL++ L AL EHA+D PA Sbjct: 1 MTDERNVLGGPLEPCGTDPMTGFSRDGCCTSGPEDLGSHTVCAVVTKEFLDHQREVGNDLSTPRPEWAFPGLRPGDRWCVVAARWLQAYRAGVAAPVVLASTNARALELVPLDALREHAVDVPA 124
BLAST of NO25G01900 vs. NCBI_GenBank
Match: WP_048387262.1 (DUF2237 domain-containing protein [Marinobacter psychrophilus] >AKO53484.1 hypothetical protein ABA45_14530 [Marinobacter psychrophilus]) HSP 1 Score: 173.7 bits (439), Expect = 7.600e-40 Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 0 Query: 110 NVLGGPLELCSTDPMTGFTREGCCTTGPMDLGSHTVCAVVTEDFLRYSKSRGNDLMTPRPDFSFPGLKSGDKWCLCASRWAEAYDEGVACSVLLKSTHIKALDVCDLSALIEHALD 226 NV+G PLE+C DP+TGF R+GCC TGP D+G+HTVCAVVT+DFL +S+SRGNDL RP+F FPGLK+GD WCLCA RW EA D G A V LK+TH+ AL+VCDL+ L +H++D Sbjct: 9 NVIGEPLEVCGKDPVTGFFRDGCCNTGPEDMGNHTVCAVVTDDFLAFSRSRGNDLTEARPEFGFPGLKAGDGWCLCAGRWREALDAGCAPRVRLKATHLAALEVCDLADLKKHSVD 124
BLAST of NO25G01900 vs. NCBI_GenBank
Match: WP_013425729.1 (DUF2237 domain-containing protein [Frankia inefficax] >ADP82611.1 Protein of unknown function DUF2237 [Frankia inefficax]) HSP 1 Score: 173.3 bits (438), Expect = 9.900e-40 Identity = 77/124 (62.10%), Postives = 99/124 (79.84%), Query Frame = 0 Query: 105 MRGEINVLGGPLELCSTDPMTGFTREGCCTTGPMDLGSHTVCAVVTEDFLRYSKSRGNDLMTPRPDFSFPGLKSGDKWCLCASRWAEAYDEGVACSVLLKSTHIKALDVCDLSALIEHALDPPA 229 M E NVLGGPLE C TDPMTGF+R+GCC++GP DLGSHTVCAVVT++FL + + GNDL TPRP+++FPGL+ GD+WC+ A+RW +AY GVA V+L ST+ +AL++ L AL EHA+D PA Sbjct: 1 MTDERNVLGGPLEPCGTDPMTGFSRDGCCSSGPEDLGSHTVCAVVTKEFLDHQREVGNDLSTPRPEWAFPGLRPGDRWCVVAARWLQAYRAGVAAPVVLASTNARALELVPLDALREHAVDVPA 124 The following BLAST results are available for this feature:
BLAST of NO25G01900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G01900 ID=NO25G01900|Name=NO25G01900|organism=Nannochloropsis oceanica|type=gene|length=2012bpback to top protein sequence of NO25G01900.1 >NO25G01900.1-protein ID=NO25G01900.1-protein|Name=NO25G01900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=266bpback to top Synonyms
Publications
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