NO25G01840, NO25G01840 (gene) Nannochloropsis oceanica

Overview
NameNO25G01840
Unique NameNO25G01840
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1952
Alignment locationchr25:550607..552558 -

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial substrate carrier family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:550607..552558 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of NO25G01840 vs. NCBI_GenBank
Match: EWM21694.1 (mitochondrial substrate carrier family protein [Nannochloropsis gaditana])

HSP 1 Score: 374.0 bits (959), Expect = 5.200e-100
Identity = 201/291 (69.07%), Postives = 228/291 (78.35%), Query Frame = 0 
Query:   16 GLRDLRQLEQSINVIPYR------PRQSDS--TDDASIPAIGQHSEEKIKASPALKAFAGSAGGLVEAVTLQPVDTIKTRMQLHPTLYPSMIQTAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGVLSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVDAARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPAAGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKTR 299
            GLRDLR LE  + VIPYR      P  S S    D +IP +     ++ KASP LKA AGS GGLVEA+ LQPVDTIKTRMQ+ PT YPSMI+TA++I +EESVPALWKGLTPFATHLFSKYALRFGTNA FQS+LTD ETG LS+SRRLLAGLGAG+TEAILIVTPFDVVKVRLQAQHG+DK+ L+Y GP+DAARKI+SQEG GALWSGVTPTI RNGIQQA+MF+LK  ID+ V G+       K   K+G   +  ++  VWQSM SGFMASCPGLVMTNP DIVK R
Sbjct:   56 GLRDLRPLESPLKVIPYRHVLPTSPHTSHSPPPSDDAIPVV---ERQRQKASPLLKALAGSMGGLVEAIALQPVDTIKTRMQILPTSYPSMIKTAQKIASEESVPALWKGLTPFATHLFSKYALRFGTNAAFQSILTDSETGKLSSSRRLLAGLGAGVTEAILIVTPFDVVKVRLQAQHGMDKANLKYQGPLDAARKIISQEGVGALWSGVTPTIYRNGIQQATMFFLKTWIDDNVLGVR------KSLTKDG---QETRQPQVWQSMASGFMASCPGLVMTNPLDIVKVR 334
[Close]
BLAST of NO25G01840 vs. NCBI_GenBank
Match: XP_021855545.1 (mitochondrial succinate-fumarate transporter 1 [Spinacia oleracea] >KNA07778.1 hypothetical protein SOVF_168780 [Spinacia oleracea])

HSP 1 Score: 300.4 bits (768), Expect = 7.300e-78
Identity = 156/308 (50.65%), Postives = 198/308 (64.29%), Query Frame = 0 
Query:   55 KIKASPALKAFAGSAGGLVEAVTLQPVDTIKTRMQL-HPTLYPSMIQTAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGVLSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVDAARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPAAGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKTRLALQAKKGRPV-YTGVAHALYTIATQEGIPTLYRGLLPRLLRVPPGMAVTWGVSDQLVQWVEK 361
            K+   P +KA +GS GG+VEA  LQP+D IKTR+QL     Y  ++     +   E V ALWKGLTPFATHL  KYALR GTNA  QS L D ETG +S   RL +G GAG+ EA++IVTPF+VVK+RLQ Q GL   LL+Y GP+  AR I+ +EG   LW+G  PT+ RNG  QA+MF  K + D+ +W             K+ G    G  L  WQSM+SGF+A   G + T PFD+VKTRL  Q+K G  V YTG+ HA+ TI  +EG+  L+RGLLPRL+R+PPG A+ W V+DQL+   EK
Sbjct:   17 KVTVPPYMKAISGSVGGIVEASCLQPIDVIKTRLQLDRAGNYKGILHCGTTVANSEGVRALWKGLTPFATHLTLKYALRMGTNAVLQSALRDSETGKISHQARLFSGFGAGVLEALVIVTPFEVVKIRLQQQKGLSPELLKYKGPIHCARTIIGEEGILGLWAGAAPTVMRNGTNQAAMFTAKFMFDKALW------------KKQEG---DGTVLQPWQSMISGFLAGTAGPICTGPFDVVKTRLMAQSKSGGDVKYTGMVHAIRTIHAEEGLRALWRGLLPRLMRIPPGQAIMWAVADQLIGLYEK 309
[Close]
BLAST of NO25G01840 vs. NCBI_GenBank
Match: PIA32344.1 (hypothetical protein AQUCO_04500149v1 [Aquilegia coerulea])

HSP 1 Score: 298.5 bits (763), Expect = 2.800e-77
Identity = 156/320 (48.75%), Postives = 202/320 (63.12%), Query Frame = 0 
Query:   43 ASIPAIGQHSEEKIKASPALKAFAGSAGGLVEAVTLQPVDTIKTRMQL-HPTLYPSMIQTAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGVLSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVDAARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPAAGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKTRLALQAKKGRPV-YTGVAHALYTIATQEGIPTLYRGLLPRLLRVPPGMAVTWGVSDQLVQWVEK 361
            A  P    +   K    P +KAFAGS GG+VEA  LQP+D IKTR+QL     Y  +I   K ++  E V ALWKGLTPFATHL  KYALR G+NA  Q+   D +TG +S   RLL+G GAG+ EA++IVTPF+VVK+RLQ Q GL   LL+Y GP+  AR I+ +EG   LW+G  PT+ RNG  QA+MF  K   D  +W  +           EG     G+ L  WQSM+SGF+A   G V T PFD+VKTRL  Q++ G  V Y G+ HA+ TI  +EG+  L++GLLPRL+R+PPG A+ WGV+DQ+  + E+
Sbjct:    2 AENPKPNDNQNPKKTIPPYMKAFAGSIGGIVEASCLQPIDVIKTRLQLDRSNTYKGIIHCGKTVSKTEGVRALWKGLTPFATHLTLKYALRMGSNAVLQTAFKDSQTGAISNRGRLLSGFGAGVLEALVIVTPFEVVKIRLQQQKGLSPELLKYKGPIHCARMIIREEGILGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKH-----------EGD----GRTLQPWQSMVSGFLAGTAGPVCTGPFDVVKTRLMAQSRSGGDVKYKGMVHAIRTIFAEEGLLALWKGLLPRLMRIPPGQAIMWGVADQVTGFYER 306
[Close]
BLAST of NO25G01840 vs. NCBI_GenBank
Match: XP_004490409.1 (PREDICTED: mitochondrial succinate-fumarate transporter 1 [Cicer arietinum] >XP_004490410.1 PREDICTED: mitochondrial succinate-fumarate transporter 1 [Cicer arietinum])

HSP 1 Score: 297.7 bits (761), Expect = 4.700e-77
Identity = 160/328 (48.78%), Postives = 206/328 (62.80%), Query Frame = 0 
Query:   35 RQSDSTDDASIPAIGQHSEEKIKASPALKAFAGSAGGLVEAVTLQPVDTIKTRMQLHPT-LYPSMIQTAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGVLSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVDAARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPAAGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKTRLALQAKKGRPV-YTGVAHALYTIATQEGIPTLYRGLLPRLLRVPPGMAVTWGVSDQLVQWVEK 361
            +Q  +T D S      +S  K    P +KA +GS GG+VEA  LQP+D IKTR+QL  +  Y  ++     I   E V ALWKGLTPFATHL  KY LR G+NA  QS+  D ETG +S   RLL+G GAG+ EA++IVTPF+VVK+RLQ Q GL   LL+Y GPV  AR I+ +EG+  LW+GVTPTI RNG  Q++MF  K   D  +W  N           EG     GK L  WQSM+SGF+A   G   T PFD+VKTRL  Q K+G  + Y G+ HA+ TI  +EG+  L++GLLPRL+R+PPG A+ W V+DQ++   E+
Sbjct:    2 KQDAATQDNS----NTNSYSKKSIPPYMKAISGSLGGIVEASCLQPIDVIKTRLQLDRSGNYKGIVHCGATIVRSEGVRALWKGLTPFATHLTLKYTLRMGSNAALQSVFKDPETGKISNHGRLLSGFGAGVLEAVVIVTPFEVVKIRLQQQKGLSHELLKYRGPVHCARMIIKEEGFRGLWAGVTPTIMRNGTNQSAMFTAKNAFDVLLWKKN-----------EGD----GKVLLPWQSMISGFLAGTAGPFCTGPFDVVKTRLMAQGKEGGEMKYRGMIHAIRTIYAEEGLAALWKGLLPRLMRIPPGQAIMWAVADQVIGLYER 310
[Close]
BLAST of NO25G01840 vs. NCBI_GenBank
Match: GAU45262.1 (hypothetical protein TSUD_132790 [Trifolium subterraneum])

HSP 1 Score: 297.4 bits (760), Expect = 6.200e-77
Identity = 154/297 (51.85%), Postives = 194/297 (65.32%), Query Frame = 0 
Query:   60 PALKAFAGSAGGLVEAVTLQPVDTIKTRMQLHPT-LYPSMIQTAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGVLSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVDAARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPAAGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKTRLALQAKKGRPV-YTGVAHALYTIATQEGIPTLYRGLLPRLLRVPPGMAVTWGVSDQL 355
            P +KA +GS GG++EA  LQP+D IKTR+QL  +  Y  ++     I   E V ALWKGLTPFATHL  KY LR G+NA  QS   D ETG +S   RLL+G GAG+ EA+LIVTPF+VVK+RLQ Q GL   LL+Y GPV  A  I+ +EG+  LW+GVTPTI RNG  Q++MF  K   D  +W  N           EG     GK L  WQSM+SGF+A   G + T PFD+VKTRL  Q ++G  V Y G+ HA+ TI  +EG+  L++GLLPRL+R+PPG A+ WGV+DQL
Sbjct:   22 PYMKAISGSLGGIMEAACLQPIDVIKTRLQLDRSGNYKGIVHCGTTIVRSEGVRALWKGLTPFATHLTLKYTLRMGSNAVLQSAFKDSETGKISNHGRLLSGFGAGVLEAVLIVTPFEVVKIRLQQQKGLSHELLKYRGPVHCAGMIIKEEGFRGLWAGVTPTIMRNGTNQSAMFTAKNAFDMLLWKKN-----------EGD----GKVLLPWQSMISGFLAGTAGPICTGPFDVVKTRLMAQGREGGEVKYKGMIHAIRTIYVEEGLVALWKGLLPRLMRIPPGQAIVWGVADQL 303
[Close]
BLAST of NO25G01840 vs. NCBI_GenBank
Match: XP_020578916.1 (mitochondrial succinate-fumarate transporter 1 [Phalaenopsis equestris])

HSP 1 Score: 297.4 bits (760), Expect = 6.200e-77
Identity = 155/309 (50.16%), Postives = 201/309 (65.05%), Query Frame = 0 
Query:   54 EKIKASPALKAFAGSAGGLVEAVTLQPVDTIKTRMQL-HPTLYPSMIQTAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGVLSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVDAARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPAAGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKTRLALQAKKGRPV-YTGVAHALYTIATQEGIPTLYRGLLPRLLRVPPGMAVTWGVSDQLVQWVEK 361
            +K    P ++A +GS GG++EA  LQP+D IKTR+QL H   Y  +    K +   E V ALWKGLTPFATHL  KYALR G+NA FQS   D  TG LS   RL++G GAG+ EA++IVTPF+VVK+RLQ Q GL   LL+Y GP+  AR I+ +EG   LW+G TPT+ RNGI QA+MF  K   D  +W  N           EG     GK L  WQSM+SGF+A   G + T PFD+VKTRL  Q+K G  + Y G+ HA+ TIA +EG+ +L++GLLPRL+R+PPG A+ W V+DQ+  + E+
Sbjct:   16 KKESIPPYVRAISGSIGGIMEACCLQPIDVIKTRLQLDHSGAYRGIADCGKTVARTEGVRALWKGLTPFATHLTLKYALRMGSNALFQSAFKDSATGDLSQRGRLMSGFGAGVLEALVIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARTIIVEEGILGLWAGATPTVMRNGINQAAMFTAKNAFDIILWTKN-----------EGD----GKVLQPWQSMISGFLAGTCGPICTGPFDVVKTRLMAQSKSGGELKYKGMFHAIRTIAAEEGVFSLWKGLLPRLMRIPPGQAIMWAVADQITGFYER 309
[Close]
BLAST of NO25G01840 vs. NCBI_GenBank
Match: XP_021769694.1 (mitochondrial succinate-fumarate transporter 1-like [Chenopodium quinoa])

HSP 1 Score: 297.4 bits (760), Expect = 6.200e-77
Identity = 155/308 (50.32%), Postives = 195/308 (63.31%), Query Frame = 0 
Query:   55 KIKASPALKAFAGSAGGLVEAVTLQPVDTIKTRMQL-HPTLYPSMIQTAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGVLSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVDAARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPAAGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKTRLALQAKKGRPV-YTGVAHALYTIATQEGIPTLYRGLLPRLLRVPPGMAVTWGVSDQLVQWVEK 361
            ++   P +KA +GS GG+VEA  LQP+D IKTR+QL     Y  ++     +   E V ALWKGLTPFATHL  KYALR GTNA  QS   D ETG LS   RL +G GAG+ EA++IVTPF+VVK+RLQ Q GL   LL+Y GP+  AR  + +EG   LWSG  PT+ RNG  QA+MF  K + D+ +W             K+ G    G  L  WQSM+SGF+A   G + T PFD+VKTRL  Q+K G  V YTG+ HA+ TI  +EG+  L+RGLLPRL+R+PPG A+ W V+DQL    EK
Sbjct:   19 RVTVPPYMKAISGSVGGIVEACCLQPIDVIKTRLQLDRAGNYKGILHCGTTVANTEGVRALWKGLTPFATHLTLKYALRMGTNAVLQSAFKDSETGKLSYQGRLFSGFGAGVLEALVIVTPFEVVKIRLQQQKGLSPELLKYKGPIHCARMTIREEGIRGLWSGAAPTVMRNGTNQAAMFSAKFMFDKALWN------------KQEG---DGTVLQPWQSMISGFLAGTAGPICTGPFDVVKTRLMAQSKSGNNVKYTGMVHAIKTIYAEEGLRALWRGLLPRLMRIPPGQAIMWAVADQLTGLYEK 311
[Close]
BLAST of NO25G01840 vs. NCBI_GenBank
Match: XP_021744763.1 (mitochondrial succinate-fumarate transporter 1-like [Chenopodium quinoa])

HSP 1 Score: 297.0 bits (759), Expect = 8.100e-77
Identity = 155/308 (50.32%), Postives = 195/308 (63.31%), Query Frame = 0 
Query:   55 KIKASPALKAFAGSAGGLVEAVTLQPVDTIKTRMQL-HPTLYPSMIQTAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGVLSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVDAARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPAAGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKTRLALQAKKGRPV-YTGVAHALYTIATQEGIPTLYRGLLPRLLRVPPGMAVTWGVSDQLVQWVEK 361
            ++   P +KA +GS GG+VEA  LQP+D IKTR+QL     Y  ++     +   E V ALWKGLTPFATHL  KYALR GTNA  QS   D ETG LS   RL +G GAG+ EA++IVTPF+VVK+RLQ Q GL   LL+Y GP+  AR  + +EG   LWSG  PT+ RNG  QA+MF  K + D+ +W             K+ G    G  L  WQSM+SGF+A   G + T PFD+VKTRL  Q+K G  V YTG+ HA+ TI  +EG+  L+RGLLPRL+R+PPG A+ W V+DQL    EK
Sbjct:   18 RVTVPPYMKAISGSVGGIVEACCLQPIDVIKTRLQLDRAGNYKGILHCGTTVANTEGVRALWKGLTPFATHLTLKYALRMGTNAVLQSAFKDSETGKLSYQGRLFSGFGAGVLEALVIVTPFEVVKIRLQQQKGLSPELLKYKGPIHCARLTIREEGIRGLWSGAAPTVMRNGTNQAAMFSAKFMFDKALWN------------KQEG---DGTVLQPWQSMISGFLAGTAGPICTGPFDVVKTRLMAQSKSGNNVKYTGMVHAIKTIYAEEGLRALWRGLLPRLMRIPPGQAIMWAVADQLTGLYEK 310
[Close]
BLAST of NO25G01840 vs. NCBI_GenBank
Match: PSS34696.1 (Mitochondrial succinate-fumarate transporter like [Actinidia chinensis var. chinensis])

HSP 1 Score: 297.0 bits (759), Expect = 8.100e-77
Identity = 158/314 (50.32%), Postives = 201/314 (64.01%), Query Frame = 0 
Query:   49 GQHSEEKIKASPALKAFAGSAGGLVEAVTLQPVDTIKTRMQLHPT-LYPSMIQTAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGVLSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVDAARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPAAGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKTRLALQAKKGRPV-YTGVAHALYTIATQEGIPTLYRGLLPRLLRVPPGMAVTWGVSDQLVQWVEK 361
            GQ+  EK    P +KA AGS GG+VEA  LQP+D IKTR+QL  +  Y  +I     I   E V ALWKGLTPFATHL  KYALR G+NA FQS   D +TG LS   R+LAG GAG+ EA++IVTPF+VVK+RLQ Q GL   LL+Y GP+  AR I+ +EG   LW+G  PT+ RNG  QA+MF  K   D  +W  +       EG +        K L  WQSM+SGF+A   G V T PFD+VKTRL  Q++ G  + Y G+ HA+ TI  +EG+  L++GLLPRL+R+PPG A+ W V+DQ+  + EK
Sbjct:    3 GQNPNEKRSIPPYVKAVAGSIGGIVEASCLQPIDVIKTRLQLDRSGAYKGIIHCGTTIVRTEGVRALWKGLTPFATHLTLKYALRMGSNAVFQSAFKDSQTGKLSNRGRVLAGFGAGVLEALVIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGILGLWAGAAPTVMRNGTNQAAMFTAKNSFDVILWKKH-------EGDR--------KVLQPWQSMISGFLAGTVGPVCTGPFDVVKTRLMAQSRSGGELKYKGMVHAITTIYKEEGLRALWKGLLPRLMRIPPGQAIMWTVADQVTGFYEK 301
[Close]
BLAST of NO25G01840 vs. NCBI_GenBank
Match: GAQ91590.1 (mitochondrial substrate carrier family protein [Klebsormidium nitens])

HSP 1 Score: 295.4 bits (755), Expect = 2.300e-76
Identity = 161/310 (51.94%), Postives = 199/310 (64.19%), Query Frame = 0 
Query:   54 EKIKASPALKAFAGSAGGLVEAVTLQPVDTIKTRMQL-HPTLYPSMIQTAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGVLSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVDAARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPAAGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKTRLALQ--AKKGRPVYTGVAHALYTIATQEGIPTLYRGLLPRLLRVPPGMAVTWGVSDQLVQWVEK 361
            E+ ++ P +KA +GS GG+VEA  LQP+D IKTR+QL     Y  + Q    I  EE   ALWKGLTPFATHL  KYALR GTNA F + L D ETG LS++RR+ AG GAG+TEA++IVTPF+VVK+RLQ Q GL K LL+Y GPV  A  IV +EG   LWSG TPT+ RNG  QA MF  K  ID+        A   +EG         G+ L  WQSM +GF+A   G + T PFD+VKTRL  Q       P Y G+ HA+  IA++EG+  L+RGLLPRL+R+PPG A+ W V+DQL    EK
Sbjct:   15 ERRRSPPWVKAASGSLGGVVEAACLQPIDVIKTRLQLDRAGKYTGIWQCGSTIVKEEGARALWKGLTPFATHLTLKYALRMGTNAVFSAALRDVETGELSSARRMAAGFGAGVTEALVIVTPFEVVKIRLQQQQGLTKELLRYKGPVHGAVTIVKEEGLRGLWSGATPTVMRNGTNQAVMFAAKAAIDKY-------AFDKREG--------DGQILAPWQSMTAGFLAGVAGPIATGPFDVVKTRLMAQEHVPGVEPRYRGLFHAIGKIASEEGVLALWRGLLPRLMRIPPGQAIMWAVADQLTGMYEK 309
The following BLAST results are available for this feature:
BLAST of NO25G01840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21694.15.200e-10069.07mitochondrial substrate carrier family protein [Na... [more]
XP_021855545.17.300e-7850.65mitochondrial succinate-fumarate transporter 1 [Sp... [more]
PIA32344.12.800e-7748.75hypothetical protein AQUCO_04500149v1 [Aquilegia c... [more]
XP_004490409.14.700e-7748.78PREDICTED: mitochondrial succinate-fumarate transp... [more]
GAU45262.16.200e-7751.85hypothetical protein TSUD_132790 [Trifolium subter... [more]
XP_020578916.16.200e-7750.16mitochondrial succinate-fumarate transporter 1 [Ph... [more]
XP_021769694.16.200e-7750.32mitochondrial succinate-fumarate transporter 1-lik... [more]
XP_021744763.18.100e-7750.32mitochondrial succinate-fumarate transporter 1-lik... [more]
PSS34696.18.100e-7750.32Mitochondrial succinate-fumarate transporter like ... [more]
GAQ91590.12.300e-7651.94mitochondrial substrate carrier family protein [Kl... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL047nonsL047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006390NSK006390Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01840.2NO25G01840.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO25G01840.1NO25G01840.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|604047gene_8797Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100723g1gene8735Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01840.2NO25G01840.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO25G01840.1NO25G01840.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01840 ID=NO25G01840|Name=NO25G01840|organism=Nannochloropsis oceanica|type=gene|length=1952bp
TCCCTCTTTTGAGCAGTGGACGCACATCATTGCTGACAGGAACTGCGACA
AGGCTCTATTCAAAATTACGCGCCTCCTGCGCCGCACTTTACAAGTGCAA
CCCCGAGCCGCTCGCTCAACGACTCGCTCGTTGACGCATGCGTTCGTTCA
TCCGTCTTCAAAAGGAGTTGAGGTCCCGACTGGGACCCCGTCGAGATGTG
CTTTTTCCATTCCCTGCGGCCTTTCGAAACCCTCATGCGCGTGAAAATTT
TGCTGGGTATTAAACGCCTTAAAAATAAGTCTCGCACCCCTGCTTGATCC
AACGGCCTCGTCCCGCAAAGTGGGTATCCCCCACCAGCGCCCGGTGACCA
CGATAGGGCGCTGTCCTCCCCAAAACCTAGTGTTTCCCACGCTCTCATTA
CCTTACCCACCTACAGGCACAAGCGACACCACCAAATCCTCAAGCATCCC
TCAAACCTCGACCAGGCGGACATGCCCGACTCTTCCAATGCCACCGATTA
CCCTGCATATATTGCCGGCCTCCGGGACTTGCGCCAACTCGAACAGTCTA
TCAATGTAATCCCTTATCGGCCCCGTCAGAGCGATTCTACTGACGACGCC
TCCATCCCCGCCATCGGCCAGCATAGCGAAGAGAAGATCAAGGCCTCCCC
GGCCCTCAAGGCCTTTGCCGGGAGCGCTGGGGGGCTTGTCGAGGCTGTTA
CCCTGCAACCTGTCGATACCATAAAGACAAGAATGCAGCTTCATCCGACC
CTGTACCCGTCCATGATTCAGACGGCCAAAAGAATAACTGCCGAGGAGTC
CGTGCCTGCCTTGTGGAAGGGTCTCACGCCGTTTGCCACGCACTTGTTCA
GCAAATATGCCTTGCGGTTTGGGACGAACGCCACCTTTCAATCATTGCTG
ACAGATAAGGAGACCGgtacgtgaagaatggagtgaagaggggtagggag
ggaagaacagagaaggtgcttgcgatgtaggaacaagggaaggggaaagg
gcggggggaaaggaagggatttgactgttaacagagggtgctcgtccttc
tttgtcgtttactcatgtattcttcctcccccctccctccctcccaccct
ccctccctcctccctcctcacagGCGTTCTCTCGACCTCCCGCCGTCTTC
TCGCGGGCCTTGGGGCGGGGATTACCGAAGCGATCCTGATAGTGACCCCT
TTCGACGTCGTCAAGGTGAGGCTACAGGCCCAACATGGCCTGGACAAGTC
TCTCCTTCAGTACCACGGACCGGTGGACGCCGCCCGGAAAATCGTCTCTC
AGGAGGGATGGGGGGCGTTGTGGTCAGGGGTGACTCCCACCATCTGCAGG
AACGGGATCCAGCAAGCGTCGATGTTTTATTTGAAGCAGCTGATTGACGA
GGAGGTGTGGGGCTTGAACACACCGGCGGCAGGAGGGAAGGAGGGCGTGA
AGGAGGGAGGGGTGGTGGAGAGGGGGAAAAAGCTGACGGTGTGGCAGTCG
ATGATGTCGGGATTTATGGCGTCATGTCCCGGCCTGGTGATGACCAATCC
CTTCGACATTGTCAAGgtaagacgaagacaatggaatgagacaggagcag
gaggaggaggaggaactcgatgcccctcgcttgcatgcccgcgatttagc
cgtcctcccttccctccctctcaccctccctccctttctctcctcccctt
agACCCGCCTCGCCCTTCAAGCGAAAAAAGGCCGGCCTGTCTACACGGGC
GTGGCCCATGCGCTCTACACCATCGCCACGCAAGAAGGCATCCCTACCCT
GTACCGCGGCTTGCTTCCGCGCCTCCTGCGGGTGCCACCCGGCATGGCCG
TGACATGGGGAGTCTCGGACCAGCTCGTCCAGTGGGTGGAGAAGTAATTT
AAGGCGGGTAAAGGAGAGATGGAGGGAGGGTGAGGGAGGGAGAAAGTGAG
GG
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protein sequence of NO25G01840.2

>NO25G01840.2-protein ID=NO25G01840.2-protein|Name=NO25G01840.2|organism=Nannochloropsis oceanica|type=polypeptide|length=408bp
MPDSSNATDYPAYIAGLRDLRQLEQSINVIPYRPRQSDSTDDASIPAIGQ
HSEEKIKASPALKAFAGSAGGLVEAVTLQPVDTIKTRMQLHPTLYPSMIQ
TAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGV
LSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVD
AARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPA
AGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKVRRR
QWNETGAGGGGGTRCPSLACPRFSRPPFPPSHPPSLSLLPLDPPRPSSEK
RPACLHGRGPCALHHRHARRHPYPVPRLASAPPAGATRHGRDMGSLGPAR
PVGGEVI*
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protein sequence of NO25G01840.1

>NO25G01840.1-protein ID=NO25G01840.1-protein|Name=NO25G01840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=361bp
MPDSSNATDYPAYIAGLRDLRQLEQSINVIPYRPRQSDSTDDASIPAIGQ
HSEEKIKASPALKAFAGSAGGLVEAVTLQPVDTIKTRMQLHPTLYPSMIQ
TAKRITAEESVPALWKGLTPFATHLFSKYALRFGTNATFQSLLTDKETGV
LSTSRRLLAGLGAGITEAILIVTPFDVVKVRLQAQHGLDKSLLQYHGPVD
AARKIVSQEGWGALWSGVTPTICRNGIQQASMFYLKQLIDEEVWGLNTPA
AGGKEGVKEGGVVERGKKLTVWQSMMSGFMASCPGLVMTNPFDIVKTRLA
LQAKKGRPVYTGVAHALYTIATQEGIPTLYRGLLPRLLRVPPGMAVTWGV
SDQLVQWVEK*
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Synonyms
Publications