NO25G01660, NO25G01660 (gene) Nannochloropsis oceanica

Overview
NameNO25G01660
Unique NameNO25G01660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4159
Alignment locationchr25:461106..467022 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:461106..467022 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G01660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL045nonsL045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL044nonsL044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR072ngnoR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004267NSK004267Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G01660.1NO25G01660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO25G01660.2NO25G01660.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|603916gene_8766Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G01660.1NO25G01660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO25G01660.2NO25G01660.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G01660 ID=NO25G01660|Name=NO25G01660|organism=Nannochloropsis oceanica|type=gene|length=4159bp
CTTGCTTGTGTCTTTTGTGTCTGTGTGTTTGCATGGTGTGGGTGGGTGCA
TGAGTGCGTGATAACAGCAGCCCCACAATTCGCCGTGTCCCCTCTTCTTC
CTCTTCTCCTCGCCTCCTCAGCCACGGAGAGGTTGCTTGGTCGGCATGGG
CGATTTTCATACCCAGAAAATGTAACCAAGGACACAAAGCCCCACATAAG
CTTAGGCTTCCTGGCCAGTGTCGTGGTCAGGGGCGTTGGATCGGCTGAGG
AGACGCGTGGGAGAGAGACTGGAGGGACTCCGTGGACGAGGACGGGGCAT
ATGATGGTCCTAAGATTGGCATCATGAGCGAATCGACCTCCTTACGGCCG
CGCCATTTCTGTTTGTATGAATTCAGGCATGGGCATGGGCATTGGCGATC
AGTGCCTAGGGACTACACGTACATGAAAACACTGCGTAAAAATGTTGCCA
CCTTGACCTGAGAGCTTATTTTTCGTCTTCCTGTATTCGGTGGCTTGGAC
TAGCCACTTGGACGATGGACAGCACCACTATCATCTCTCACCCTGGCCCA
CCCCTCTGACCTAATCCACACTCTTCTTTACGCACACCTCCAAAACACCG
GCAGCGCCGAAATCATGCGGACCCGCAGCCTCTTGGCGTGGTTGGGCGGC
TTCGAGGCCCGCGTGGCGGCGGCCATTAGCGAGGACGATGACAATGCCAT
TGCCCTGGCCCTCCTCCAAAGTGGGCACGTCCTGTGGAACATCATGGACC
AGCTGCACGACGGTGAGCTTCAAGGCACGCGGGACGACAAGACTGAGGAG
GGTGAGGAGGAGGATATCAAGCGATGCTGGAAAGCCCTTTTGCCCTTCCT
TCGTCCTACCCTCCCCCGGGCCATCGCCGCTAAGCTTGCGTCGTCTTCCT
CCTCCCCTTCTTCGTCCTTTCTCATGCCTTTGTCCATGCTCCCCGCCGTC
CTCGAAACCTTCCTGGGCGCCGCCGTAGGCTCAAAGGTACCAAAACGCTC
ACAAAGTATCCATCAAATCCTGGCCTTGTCGgtacgtacaattatgagga
ggggagtgtagggaggaaggcaaggcagagaggaagggcctgtagctgga
ctcgagctcaccaaacacttctctatgaaatagCCTGAGTACCAGGAGCA
GCTCAAGACCGTAATTGAAGAGCAGATGGCGGCTAAGAACCGCGAAGGAA
GCGACAATGACGATGACGACGACGGGGAAAGTGAGCAGAAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGATGAAGTGAGGGTGGGTGGCGGTACGAACGGTGGAGGGCAAT
ATTTGACAAGCGACGAGGCGGACACAGTGCAAGGCCCTTTCTTTGTCCCC
GTAACTGCGCCCGCCATCATGAGAAAGGACCAAGCCGACGACAAAGGCGA
GGAAGAGGATGAGGAGGAGGAGGAAGAAAAGGAGGAAGAGCGGGTTGTAA
TGGCAGGCGCCACGATCTGTCCCATCAGCAGCGACAGCAGCAACAGCAAC
CTCACCACCCCTTCCAAGAAGTTTCCCTCCTTCGAAGGAAAAAGCGACCA
GACCCCTCAACAACAGCGGCAAGAGCGTCTTGCCCTCCTCCACGCACGCC
TGCGGGAGCTGGAAAACGAGAATCTCCGGCTGCTCCAACACCAACAGCAA
GCTGCTGTCCGGGAGGAGAAAGCCAAGGAGGAGGTGGAGACGCTCCGTGC
TTCCCTTCTCTCCCATTCCCTTGCCGGGGAGGTAGAGGCGTTGAAAAGGG
AGCAGCAGTTGAAAGATCAGCTGGCGGAAGTGAGCAAGAGGCTGGTGGCG
GCTGAGAAGAAGGGAAAGGCAGGGGAGGGCGTGAGGGAAGAGATGGCGAT
GTTACAGgtaggaaaggaaggagggaggaaagtaagagataggtgacact
tccaaaataacagtcggtcgaaagactctgttccaacgtgctcatcctcc
catcgtcgctccttccctccctccctccctccctccctccctgtatcctc
cttcccaccccatgcagGACGAGTTGGACCTGATTCGCCCTACCGCAGAA
AAGCTTGCCCTGACTGAAGAGGCTCTGGGGAAGGCCAAGACCAAACTCCA
GGACTTGCGCGACGTCAGGGAACGCCTGATGGAGGAGCAGgtagtggaag
gaaagagggagggaggaagggagcgagggagggagcgagggagggaggga
gaaaccgaacaagagaaattaaaattctggttcttgacacatcgcctccc
tccctccctctctttctcccttcctccatccctccctccctccctgacct
gctcctccctagGCGGCGCACGCGGAAGCTGTAGAAACCTCGCTCAAGTA
CGAACGAGAGCTGCAGCAGCTGCCAGCCCTCAAACGTCAGATCGAGACCC
TCAAGGCCGgtgcgtccctccctccctccctccctccctccctgcgctac
cgacccaaaacttatcctgcgctcagcacgagcccgagtcgaaacatacc
agacagaagcttccgtccttccctctcccacacgtacccaccctccctcc
ctccctccagGCGCCACCGACACGGAACTTACCCTACGAGAGCTTCAGGC
CGCCCTGGCCGAGGACGAGGCTTTAAAACAAAAGCAACAGCTAGAAATCC
ATGCCTTGCGCCAGACGTTGGCCGTGACCTCTCTCCGCGGGGCAGACGCC
ACGGCCTTCGCCGCTGCCCTGGAAGGAGGAGGAAGGGGAGGGGGATGGGA
GGGAGGGGGAGAAGGAGGGGTAGGGGGAGGCTTCTCGGAGTGTAATCCTG
AGGTGGTGAGGAGGATGAGGGCGTTGGAAGCAGAGGTGGAGGGCTTGCGT
GGGCAGGTGTCAGAAACAGCCGTAGCACGGGTGGAATCCCTGGAGGAGGA
GAAGGATGCACAGAAACGACTGGCGGAAAGCTTTGAGGAGAGgtaaggcg
ggagggagggagggcgggagggagggagagggggaagacgactcgtcgag
agaggacgactgaaacgagtgctatagttttatcactttctcctctctga
ctttttttcttcttccctccctccctcccttcctccctccctccctacct
ccctagGTACCGCAAGACCAAAGCAGAGCTGACAACGCGGACGCAGGAGT
GGGAGGTCGTGAAAGAGGGCAATGCGACGCTACACGAACAGCTGAAGATG
GTTAAGGCAAAAGCAGCGACAGAAGgtaaggacggaggtagggaaggagg
gatagagggagaaaaagtggcataaagagcttggtttgaacgaaaagttc
ctcaaaactacctcctgtccttccttccttccttccttccttccttcctt
cctccctcccttcctccctccctccctcccagGGAAGCGTCTCAGGGACA
GCAACGCGGCCATCTCTCAAGCCTTGACGGAGGCCCAGCACCAGGCAGAG
ATGAGTCAGGAAGAGTTGCAGCAGCGTGTGCACCATCAAGAGAAGGTCAT
GCGACGCGCGCACGAAGAGATGGAGGCCCGGGCATGGCTGGCTTCCTTGG
GGATGAAGGCGCTCTTGCGGAAATTGACGGACGAAACGGGGAGGTTAAAG
AAGGAGGGGGAGGAAGGGAGGAAGGCTCTAGGGGAAACGACGGGTCGTCT
GGTGGCTGCAGAGCATTGTGTGCTGCTGTTGAAAAAGGAGGGGGAGGCAG
CAGCGGTTGCAGCGGCGGCAGCAGTCGCACATGCGACCGCAGAGGGGGAG
AAGAGGGTGGGTGAGTTGTATGCACAAGCTCAAGCCCACGTGCTGGACAT
GGAGCGGAAGCAGGCCGAGGTCCTTCAGCGGCTTGAGGAGGAGATGAAGA
GGTACAGTGAGGGGCATGCGGTGAGTAATGAGGAACACCACGCGCAGATC
CAGGCGGGAAAGCGGGCCTTGGAAGTGGCCAGGAAGGAGGCTGAGGCGCT
GGGGGAGGAAGTGGAGGAGGGACGGATGGTTCGTCTTCGGATGGAAAAGG
AAAAAAGCTTTTTGGTGGAAGAGGCGCAGGTAGGTAGAGAGGGAGGGAGG
GGAAGAAGGGAGAGAGGGAGGTAGGGGCGACAAGGTGTTTTTTCACCTGA
TGATGTGCC
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protein sequence of NO25G01660.1

>NO25G01660.1-protein ID=NO25G01660.1-protein|Name=NO25G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=868bp
MRTRSLLAWLGGFEARVAAAISEDDDNAIALALLQSGHVLWNIMDQLHDG
ELQGTRDDKTEEGEEEDIKRCWKALLPFLRPTLPRAIAAKLASSSSSPSS
SFLMPLSMLPAVLETFLGAAVGSKVPKRSQSIHQILALSPEYQEQLKTVI
EEQMAAKNREGSDNDDDDDGESEQKEEEEEEEEEEEEEEEEEEEEEEDEV
RVGGGTNGGGQYLTSDEADTVQGPFFVPVTAPAIMRKDQADDKGEEEDEE
EEEEKEEERVVMAGATICPISSDSSNSNLTTPSKKFPSFEGKSDQTPQQQ
RQERLALLHARLRELENENLRLLQHQQQAAVREEKAKEEVETLRASLLSH
SLAGEVEALKREQQLKDQLAEVSKRLVAAEKKGKAGEGVREEMAMLQDEL
DLIRPTAEKLALTEEALGKAKTKLQDLRDVRERLMEEQAAHAEAVETSLK
YERELQQLPALKRQIETLKAGATDTELTLRELQAALAEDEALKQKQQLEI
HALRQTLAVTSLRGADATAFAAALEGGGRGGGWEGGGEGGVGGGFSECNP
EVVRRMRALEAEVEGLRGQVSETAVARVESLEEEKDAQKRLAESFEERYR
KTKAELTTRTQEWEVVKEGNATLHEQLKMVKAKAATEGKRLRDSNAAISQ
ALTEAQHQAEMSQEELQQRVHHQEKVMRRAHEEMEARAWLASLGMKALLR
KLTDETGRLKKEGEEGRKALGETTGRLVAAEHCVLLLKKEGEAAAVAAAA
AVAHATAEGEKRVGELYAQAQAHVLDMERKQAEVLQRLEEEMKRYSEGHA
VSNEEHHAQIQAGKRALEVARKEAEALGEEVEEGRMVRLRMEKEKSFLVE
EAQVGREGGRGRRERGR*
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protein sequence of NO25G01660.2

>NO25G01660.2-protein ID=NO25G01660.2-protein|Name=NO25G01660.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1199bp
MRTRSLLAWLGGFEARVAAAISEDDDNAIALALLQSGHVLWNIMDQLHDG
ELQGTRDDKTEEGEEEDIKRCWKALLPFLRPTLPRAIAAKLASSSSSPSS
SFLMPLSMLPAVLETFLGAAVGSKVPKRSQSIHQILALSPEYQEQLKTVI
EEQMAAKNREGSDNDDDDDGESEQKEEEEEEEEEEEEEEEEEEEEEEDEV
RVGGGTNGGGQYLTSDEADTVQGPFFVPVTAPAIMRKDQADDKGEEEDEE
EEEEKEEERVVMAGATICPISSDSSNSNLTTPSKKFPSFEGKSDQTPQQQ
RQERLALLHARLRELENENLRLLQHQQQAAVREEKAKEEVETLRASLLSH
SLAGEVEALKREQQLKDQLAEVSKRLVAAEKKGKAGEGVREEMAMLQDEL
DLIRPTAEKLALTEEALGKAKTKLQDLRDVRERLMEEQAAHAEAVETSLK
YERELQQLPALKRQIETLKAGATDTELTLRELQAALAEDEALKQKQQLEI
HALRQTLAVTSLRGADATAFAAALEGGGRGGGWEGGGEGGVGGGFSECNP
EVVRRMRALEAEVEGLRGQVSETAVARVESLEEEKDAQKRLAESFEERYR
KTKAELTTRTQEWEVVKEGNATLHEQLKMVKAKAATEGKRLRDSNAAISQ
ALTEAQHQAEMSQEELQQRVHHQEKVMRRAHEEMEARAWLASLGMKALLR
KLTDETGRLKKEGEEGRKALGETTGRLVAAEHCVLLLKKEGEAAAVAAAA
AVAHATAEGEKRVGELYAQAQAHVLDMERKQAEVLQRLEEEMKRYSEGHA
VSNEEHHAQIQAGKRALEVARKEAEALGEEVEEGRMVRLRMEKEKSFLVE
EAQSLRKELALRQGSWTLHTHGSSSSSSSTLTGTAAMTTGPGMGQSAMNN
LSRAELEKHYEKLQKEYAALLQDHRRQQAGIQLAESSIGFCLDDFSHVEG
EEEREGGVDGIGLYYGEEKEEDASLIYPSLIEEDEEEEEEEGGGDKGERA
SGGGKPGTNTRRLSLRPAGRVGGGRGRGRGGLQHDFDTVAGQPSASSSLT
PTDNDGRGGSGGRGAVGGRRTMAGAGAAAAGAVGGGMGGRSRGNTLFTPP
ERVPFVAVDGFKHQIQALINKNRGLVAEGTAATATIHRLEGELAALKGVI
GGKEDEIGSLHYQMARLGRQVDKLTAELAGGGKERGRAEGMGMRKENT*
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Synonyms
Publications